FB2025_01 , released February 20, 2025
Aberration: Dmel\Df(2L)HisC-cadillac
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General Information
Symbol
Df(2L)HisC-cadillac
Species
D. melanogaster
Name
FlyBase ID
FBab0049460
Feature type
Also Known As
ΔHisCcadillac
Genomic Maps
Sequence coordinates
2L:21,400,846..21,400,846 (Df(2L)HisC-cadillac:bk1)
2L:21,573,411..21,573,411 (Df(2L)HisC-cadillac:bk2)
Member of large scale dataset(s)
Nature of Aberration
Cytological Order
Class of aberration (relative to wild type)
Class of aberration (relative to progenitor)
Breakpoints
Causes alleles
Carries alleles
Formalized genetic data
Genetic mapping information
Comments

Deletion that removes the histone complex.

The Df(2L)HisC-cadillac chromosome is a precise deletion of the histone gene array, with a multifunctional cassette that permits site-specific insertion of either one or two synthetic gene arrays inserted in place of the deleted sequence. Df(2L)HisC-cadillac was generated by replacing the P{3'.RS5+3.3'}His-C insertion in Df(2L)HisC with a multifunctional cassette that encodes a Disc\RFPDsRed(T1).Act5C marker. In addition, Lamp1 gene sequence was inserted, restoring an intact Lamp1 gene. The Disc\RFPDsRed(T1).Act5C marker in the multifunctional cassette is flanked on each side by a pair of attP sites (the two sites are in the same orientation). This allows for integration of one or two transgenic histone gene arrays (using a donor plasmid containing a single attB site). A single loxP site is present between the upstream attP site and the promoter of the Disc\RFPDsRed(T1).Act5C marker; this can be used to remove vector sequences after integration (provided the inserted sequence itself contains a loxP site). The two attP sites can also be used for recombinase-mediated cassette exchange (where the sequence between the two attP sites is replaced with sequence from a donor plasmid containing a pair of attB sites that flank the sequence to be integrated). A B2RT site and a B3RT site are present upstream of the distal attP site upstream of the Disc\RFPDsRed(T1).Act5C marker, a B3RT site is present in between the 3' end of the Disc\RFPDsRed(T1).Act5C marker and the proximal attP site downstream of the marker, and a B2RT site is present downstream of the proximal attP site. This arrangement allows for excision of sequences that are subsequently integrated at either of the attP sites in Df(2L)HisC-cadillac. Recombination using B2RT recombinase removes both attP sites and any sequence integrated into them. Recombination using B3RT recombinase removes only the distal attP site (and any sequence integrated into it). The Df(2L)HisC-cadillac chromosome also carries the centromere proximal P{neoFRT}40A insertion to facilitate mitotic recombination.

Comments on Cytology
Sequence Crossreferences
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Partially deleted / disrupted
Molecular Data
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (140)
Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
Stocks (2)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 
Synonyms and Secondary IDs (3)
Reported As
Symbol Synonym
Df(2L)HisC-cadillac
ΔHisCCadillac
Name Synonyms
Secondary FlyBase IDs
    References (3)