FB2025_01 , released February 20, 2025
Aberration: Dmel\Df(1)CRIMIC-CR71287
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General Information
Symbol
Df(1)CRIMIC-CR71287
Species
D. melanogaster
Name
FlyBase ID
FBab0049462
Feature type
Computed Breakpoints include
Sequence coordinates
X:19,505,405..19,505,405 (Df(1)CRIMIC-CR71287:bk1)
X:19,508,577..19,508,577 (Df(1)CRIMIC-CR71287:bk2)
Member of large scale dataset(s)
Nature of Aberration
Cytological Order
Progenitor
Class of aberration (relative to wild type)
Class of aberration (relative to progenitor)
Breakpoints
Carries alleles
Formalized genetic data
Genetic mapping information
Comments

A TI{CRIMIC.TG4.1} DNA cassette has been inserted into Pfrx, in a coding intron, and is predicted to gene trap a subset of the annotated transcripts of the gene. In addition, the coding exons of Pfrx downstream of the inserted gene trap cassette have been deleted. The deletion also removes part of CG14200 (Pfrx is nested within an intron of CG14200). The TI{CRIMIC.TG4.1} cassette was inserted via the CRISPR/Cas-9 hybrid technique, using two gRNAs that target Pfrx : one targeted to a coding intron (CACCGTGACCGTCTTAATCGCGG) and the other to a non-coding exon in the 3' UTR (CAGCCGTGCTTAGATTGTCTTGG).

Comments on Cytology
Sequence Crossreferences
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Partially deleted / disrupted
Molecular Data
Completely deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (2)
Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
Stocks (1)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 
Synonyms and Secondary IDs (1)
Reported As
Symbol Synonym
Df(1)CRIMIC-CR71287
Name Synonyms
Secondary FlyBase IDs
    References (1)