A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Allele Dmel\ninaA2

General Information
SymbolDmel\ninaA2SpeciesD. melanogaster
NameFlyBase IDFBal0012960
Feature typealleleAssociated geneDmel\ninaA
Also Known AsninaAP263
Map ( GBrowse ) GBrowse View Helpdetailed view FBal0032256 FBal0032255 FBal0032245 FBal0032244 FBal0032272 FBal0012962 FBal0012963 FBal0032271 FBal0012964 FBal0032266 FBal0012960 FBal0012965 FBal0012967 FBal0012966 FBal0012968 FBal0012969 FBal0032250 FBal0012970 FBal0032239 FBal0012971 FBal0032267 FBal0012972 FBal0012973 FBal0012974 FBal0032241 FBal0032234 FBal0012978 FBal0012977 FBal0012976 FBal0032273 FBal0012979 FBal0012980 FBal0012984 FBal0012985 FBal0032264 FBal0012986 FBal0032275 FBal0012959 FBal0032243 FBal0032270 FBal0012961 FBal0032252 FBal0032265 FBal0032233 FBal0012987
Allele classloss of function allele
Mutagenethyl methanesulfonate
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Nature of the Allele
Allele class
Mutagen
Mutations Mapped to the Genome
Type
Location
Additional Notes
References
point mutation
evidence=experimental
na_change=C877620T
pr_change=Q87@|ninaA-PA
reported_na_change=C693T
reported_pr_change=Q87@
Associated Sequence Data
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
Progenitor genotype
Nature of the lesion
Statement
Reference
Amino acid replacement: Q87@.
Nucleotide substitution: C692T.
Cytology
hide Phenotypic Data
hide Phenotypic Class
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
Homozygous flies and mosaic flies in which the retinal tissue is homozygous for ninaA2 but the rest of the animal is ninaA+ lack the prolonged depolarising afterpotential (PDA) in the electroretinogram response.
Mutants exhibit excessive endoplasmic reticulum (ER) in photoreceptor cells that is dependent on expression of rhodopsin gene. The ninaE+/ninaED1 or the ninaE+/ninaED2 heterozygous genotypes do not prevent the accumulation of ER present in ninaA2 flies.
With respect to defective PDA, ninaA2 > ninaA1 > ninaA3.
 
hide External Data
Linkouts
hide Interactions
hide Phenotypic Class
hide Phenotype Manifest In
hide Additional Comments
hide Genetic Interactions
Statement
Reference
hide Xenogenetic Interactions
Statement
Reference
hide Complementation & Rescue Data
Comments
hide Stocks ( 1 )
Bloomington
hide Notes on Origin
Discoverer
Pak.
hide External Crossreferences & Linkouts
Other Crossreferences
Linkouts
hide Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym
ninaA2
 
Name Synonym
Secondary FlyBase IDs
hide References ( 5 )
Research paper
Ahmad et al., 2006, Invest. Ophthalmol. Vis. Sci. 47(9): 3722--3728
Heterologous expression of bovine rhodopsin in Drosophila photoreceptor cells. [FBrf0194158]
Gu et al., 2004, J. Biol. Chem. 279(18): 18608--18613
Drosophila ninaB and ninaD act outside of retina to produce rhodopsin chromophore. [FBrf0174785]
Kurada et al., 1998, Vis. Neurosci. 15(4): 693--700
Rhodopsin maturation antagonized by dominant rhodopsin mutants. [FBrf0103560]
Kurada and O'Tousa, 1995, Neuron 14(3): 571--579
Retinal degeneration caused by dominant rhodopsin mutations in Drosophila. [FBrf0080181]
Schneuwly et al., 1989, Proc. Natl. Acad. Sci. U.S.A. 86: 5390--5394
Drosophila ninaA gene encodes an eye-specific cyclophilin (cyclosporine A binding protein). [FBrf0050847]