A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Allele Dmel\sina4

General Information
SymbolDmel\sina4SpeciesD. melanogaster
NameFlyBase IDFBal0015668
Feature typealleleAssociated geneDmel\sina
Map ( GBrowse ) GBrowse View Helpdetailed view FBal0015668 FBal0015666 FBal0015669 FBal0015665
Allele classloss of function allele, hypomorphic allele - genetic evidence
Mutagenethyl methanesulfonate
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Description
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FB2013_03
FB2013_02
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hide Nature of the Allele
Allele class
Mutagen
Mutations Mapped to the Genome
Type
Location
Additional Notes
References
point mutation
comment=Nucleotide coordinate of mutation determined from Figure 5B of FBrf0051381 and differs from the position listed in Table 1.
evidence=experimental
na_change=C16850067T
pr_change=H184Y|sina-PA,H184Y|sina-PB
reported_na_change=C1452T
reported_pr_change=H184Y
Associated Sequence Data
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
Progenitor genotype
Nature of the lesion
Statement
Reference
Amino acid replacement: H184Y.
Amino acid replacement: H184Y. Nucleotide substitution: C1452T.
Cytology
hide Phenotypic Data
hide Phenotypic Class
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
20% ommatidia have lost the R7 photoreceptor cell.
80% of homozygotes are wild type for R7 cell formation, 90% of hemizygotes are missing R7 cells.
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Linkouts
hide Interactions
hide Phenotypic Class
hideNOT Enhancer of
Statement
Reference
sina4 is a non-enhancer of visible phenotype of Pp2B-14Dact.GMR
hideNOT Suppressor of
Statement
Reference
sina4 is a non-suppressor of visible phenotype of CanBGMR.PS, Pp2B-14Dact.GMR
sina4 is a non-suppressor of visible phenotype of Pp2B-14Dact.GMR
hide Phenotype Manifest In
hideEnhanced by
Statement
Reference
sina4 has phenotype, enhanceable by E(sina)1D1
sina4 has phenotype, enhanceable by E(sina)3K1
sina4 has phenotype, enhanceable by E(sina)4K5
sina4 has phenotype, enhanceable by E(sina)6L3
sina4 has phenotype, enhanceable by E(sina)6M4
sina4 has phenotype, enhanceable by E(sina)46CM1
sina4 has phenotype, enhanceable by ES1-1e341
sina4 has phenotype, enhanceable by frys308
sina4 has phenotype, enhanceable by glES5
sina4 has phenotype, enhanceable by Hsp83H3
sina4 has phenotype, enhanceable by pnutH2
sina4 has phenotype, enhanceable by pros10419
sina4 has phenotype, enhanceable by prosJO1
sina4 has phenotype, enhanceable by rlES7
sina4 has phenotype, enhanceable by Se220
sina4 has phenotype, enhanceable by Sin3Ae64
sina4 has phenotype, enhanceable by SS3-6s297
hideSuppressed by
Statement
Reference
sina4 has phenotype, suppressible by ES3-1e139
hideNOT Enhancer of
Statement
Reference
sina4 is a non-enhancer of eye phenotype of CanBGMR.PS, Pp2B-14Dact.GMR
sina4 is a non-enhancer of eye phenotype of Pp2B-14Dact.GMR
hideNOT Suppressor of
Statement
Reference
sina4 is a non-suppressor of eye phenotype of CanBGMR.PS, Pp2B-14Dact.GMR
sina4 is a non-suppressor of eye phenotype of Pp2B-14Dact.GMR
hideOther
Statement
Reference
hide Additional Comments
hide Genetic Interactions
Statement
Reference
hide Xenogenetic Interactions
Statement
Reference
hide Complementation & Rescue Data
Comments
hide Stocks ( 0 )
hide Notes on Origin
Discoverer
hide Comments
No interaction with P{sev-svp1} or P{sev-svp2} exists.
Weak allele. Immunohistochemistry demonstrates that the mutation does not affect gene product abundance or localisation.
hide External Crossreferences & Linkouts
Other Crossreferences
Linkouts
hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
sina4
 
Name Synonym
Secondary FlyBase IDs
hide References ( 8 )
Research paper
Sullivan and Rubin, 2002, Genetics 161(1): 183--193
The Ca(2+)-calmodulin-activated protein phosphatase calcineurin negatively regulates EGF receptor signaling in Drosophila development. [FBrf0149012]
Neufeld et al., 1998, Genetics 148(1): 277--286
A genetic screen to identify components of the sina signaling pathway in Drosophila eye development. [FBrf0100609]
Kauffmann et al., 1996, Genes Dev. 10(17): 2167--2178
Ras1 signaling and transcriptional competence in the R7 cell of Drosophila. [FBrf0089979]
Begemann et al., 1995, Development 121(1): 225--235
The Drosophila orphan nuclear receptor Seven-up requires the Ras pathway for its function in photoreceptor determination. [FBrf0076133]
Carthew et al., 1994, Proc. Natl. Acad. Sci. U.S.A. 91(24): 11689--11693
Identification of genes that interact with the sina gene in Drosophila eye development. [FBrf0077257]
Neufeld and Rubin, 1994, Cell 77(3): 371--379
The Drosophila peanut gene is required for cytokinesis and encodes a protein similar to yeast putative bud neck filament proteins. [FBrf0074019]
Carthew and Rubin, 1990, Cell 63: 561--577
seven in absentia, a gene required for specification of R7 cell fate in the Drosophila eye. [FBrf0051381]
Book
Lindsley and Zimm, 1992, The Genome of Drosophila melanogaster.
The Genome of Drosophila melanogaster. [FBrf0066905]