A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Allele Dmel\su(Hw)3

General Information
SymbolDmel\su(Hw)3SpeciesD. melanogaster
NameFlyBase IDFBal0016320
Feature typealleleAssociated geneDmel\su(Hw)
Also Known Assu(Hw)69k
Map ( GBrowse ) GBrowse View Helpdetailed view FBal0016320 FBal0032826
Allele class
Mutagenethyl methanesulfonate
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Description
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FB2013_03
FB2013_02
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hide Nature of the Allele
Allele class
Mutagen
Mutations Mapped to the Genome
Type
Location
Additional Notes
References
deletion
comment=4bp deletion (-/CACA) predicted to cause frame shift at position aa405 and premature translation stop.
Associated Sequence Data
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
Progenitor genotype
Nature of the lesion
Statement
Reference
4bp deletion (-/CACA) in exon 2 (nucleotide positions 1912-1915). This is predicted to cause a frame shift at amino acid residue 405 and premature truncation of the C-terminal region, including several zinc fingers and the mod(mdg4)67.2 interacting region.
Southern blot normal
 
Cytology
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Statement
Reference
su(Hw)3 cancels the effect of mod(mdg4)ul on trans repression of y gene expression.
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Linkouts
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Statement
Reference
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Statement
Reference
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Rescued by
Comments
Mutant phenotype was rescued by P element mediated transformation of the wild type gene.
hide Stocks ( 2 )
Bloomington
Kyoto
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Discoverer
Grell.
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Other Crossreferences
Linkouts
hide Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym
Name Synonym
Secondary FlyBase IDs
hide References ( 8 )
Research paper
Bushey and Locke, 2004, Genetics 168(3): 1395--1411
Mutations in Su(var)205 and Su(var)3-7 suppress P-element-dependent silencing in Drosophila melanogaster. [FBrf0180280]
Georgiev and Corces, 1995, Proc. Natl. Acad. Sci. U.S.A. 92(11): 5184--5188
The su(Hw) protein bound to gypsy sequences in one chromosome can repress enhancer-promoter interactions in the paired gene located in the other homolog. [FBrf0082023]
Harrison et al., 1989, Dev. Genet. 10: 239--248
The gypsy retrotransposon of Drosophila melanogaster: mechanisms of mutagenesis and interaction with the suppressor of Hairy-wing locus. [FBrf0049522]
Parkhurst et al., 1988, Genes Dev. 2: 1205--1215
The Drosophila su(Hw) gene, which controls the phenotypic effect of the gypsy transposable element, encodes a putative DNA-binding protein. [FBrf0048095]
Rutledge et al., 1988, Genetics 119: 391--397
Genetic interactions of modifier genes and modifiable alleles in Drosophila melanogaster. [FBrf0048208]
Modolell et al., 1983, Proc. Natl. Acad. Sci. U.S.A. 80: 1678--1682
Drosophila melanogaster mutations suppressible by the suppressor of Hairy-wing are insertions of a 7.3-kilobase mobile element. [FBrf0040116]
Personal communication to FlyBase
Christensen et al., 2008.4.15, Isolation and characterization of Df(3R)BSC487.
Isolation and characterization of Df(3R)BSC487. [FBrf0204515]
Weedmark, 2008.10.21, Molecular data on su(Hw)[3] allele.
Molecular data on su(Hw)[3] allele. [FBrf0206261]