A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Allele Dmel\wa

General Information
SymbolDmel\waSpeciesD. melanogaster
NameapricotFlyBase IDFBal0018195
Feature typealleleCreated / Updated2006-05-14/2006-05-14
Associated geneDmel\w
Allele classhypomorph
Mutagenspontaneous
hide Nature of the Allele
Allele class
Mutagen
Mapped Features and Mutations
Type
Symbol & Location
Additional Notes
References
 
 
 
 
Associated Sequence Data
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
 
UniProtKB/Swiss-Prot
    UniProtKB/TrEMBL
      Progenitor genotype
      Nature of the lesion
      Statement
      Reference
      copia insertion at coordinate 0, using coordinate system of FBrf0038648 where coordinate 0 is the copia insert of wa.
      The wa allele of the white locus has been cloned by retrieving previously cloned segments carrying a copy of the transposable element copia together with contiguous sequences (Bingham, Levis and Rubin, 1981; Gehring and Paro, 1980). Bingham and Judd (1981) have shown that copia homology is tightly linked to the site of wa, copia being located at coordinate 0.0 on the physical map of the white locus (Levis, Bingham and Rubin, 1982; Levis, O'Hare and Rubin, 1984) and inserted in the small second intron (Pirrotta and Brockl, 1984). The size of the copia insertion is 5 kb. A small amount of the normal 2.6 kb white transcript is also found in wa mutants. su(wa), which darkens the eyes of wa flies, results in a higher level of the 2.6 kb transcript, while su(f), which decreases the amount of pigment, results in a lower level of this transcript. Partial revertants of wa have been sequenced and found to retain one LTR of copia (Carbonare and Gehring, 1985; Mount et al., 1988; Zachar, Davison, Garza and Bingham, 1985b). 5.0 kb copia insertion map site (kb): 0 (by definition)
      Insertion of a copia element within the small intron.
      copia insertion within the small intron of the w gene.
      Insertion of copia element into the second intron.
      copia insertion in second chromosome.
      Insertion of copia element into an intron of w.
      copia insertion into an intron.
      Insertion of a copia element.
      Parallel copia-element insertion in second intron.
      copia insertion into the second intervening sequence.
      5.2kb parallel copia insertion into the second intron.
      Insertion of a copia element in the second intron, in parallel orientation.
      Insertion of a copia element into the second intron.
      Insertion of a 5.0 kb copia-element at map position 0.0 relative to the transcription start site of w.
      7.2kb 3S18 insert within the w locus.
      Antiparallel blood insertion into intron 2.
      copia insertion in the second intron.
      Assay mode
      Caused by insertion
      Carried on aberration
      Cytology
      hide Phenotypic Data
      hide Phenotypic Class
      hide Phenotype Manifest In
      pigment cell & adult
      hide Detailed Description
      Statement
      Reference
      Eye colour: yellowish with orange tone in males; lighter and somewhat yellower in females. Eye colour: mottled, with mw1. Eye colour: nearly white with rb1. Eye colour: nearly white with g1. Malpighian tubule colour: colourless. Eye colour: mottled, with mw1.
       
      The amount of pigment formed by wa is a function of gene dose: wa/- female < wa/Y male = wa/wa female < wa/wa/wa female < wa/wa male.
      A wa optic disk transplanted into a wild-type host shows autonomous eye color development.
      Eye colour: orange-brown.
      Eye colour: slightly darker than wa in the triple mutant su(wa) wa su(f)1.
      Eye colour: wsp1/wa flies have brown eyes at eclosion, which become somewhat darker with age.
      Enhanced by duplications of Doa+.
      Strong response to E(wa).
      Eye colour: orange.
      Eye colour: orange.
      Homozygous males are darker than homozygous females. Triple X metafemale individuals homozygous for wa exhibit dosage compensation of pigment levels.
      Eye colour: yellow-orange. wa is slightly dosage overcompensated in males conferring slightly more eye pigment.
      mle4 has very little effect on the dosage compensation of wa: homozygous males have slightly darker eyes than their heterozygous brothers.
      Modified by z mutations.
      Shows slight hyper dosage compensation.
      Eye colour: white in wa wch. Eye colour: white in wbf wa. Eye colour: like wa in wBwx wa.
      Homozygotes have dull orange eyes with only 3% red pigment (compared to 100% pigment in wild type).
      hide Interactions
      hide Phenotypic Class
      hideEnhanced by
      Statement
      Reference
      wa has eye color defective phenotype, enhanceable by mw1
      wa has eye color defective phenotype, enhanceable by mw2a
      hideNOT Enhanced by
      Statement
      Reference
      wa has eye color defective phenotype, non-enhanceable by Nacαhs.PF
      hideSuppressed by
      Statement
      Reference
      wa has eye color defective | recessive phenotype, suppressible by Low1
      wa has eye color defective | recessive phenotype, suppressible by Rga[+]/Rga03834
      wa has eye color defective phenotype, suppressible by Df(2R)vg135/+
      wa has eye color defective phenotype, suppressible by ox[+]/ox1
      hideNOT suppressed by
      Statement
      Reference
      wa has eye color defective phenotype, non-suppressible by Nacαhs.PF
      hideEnhancer of
      Statement
      Reference
      wa/we(g) is an enhancer of eye color defective phenotype of g53d
      wa/we(g) is an enhancer of eye color defective phenotype of g2
      wa/we(g) is an enhancer of eye color defective phenotype of g50e
      hideOther
      Statement
      Reference
      hide Phenotype Manifest In
      hideEnhanced by
      Statement
      Reference
      wa has pigment cell phenotype, enhanceable by Kr-h105208
      wa has pigment cell phenotype, enhanceable by Kr-h110642
      wa has pigment cell phenotype, enhanceable by mw1
      wa has phenotype, enhanceable by su(f)4
      wa has phenotype, enhanceable by su(f)1
      wa has phenotype, enhanceable by Ts(YLt;3Rt)R128
      wa has phenotype, enhanceable by mw3P
      wa has pigment cell phenotype, enhanceable by mw2a
      sgl05007, wa has pigment cell phenotype, enhanceable by hh2
      sgl05007, wa has pigment cell phenotype, enhanceable by hhAC
      wa has phenotype, enhanceable by Rm62D
      wa has phenotype, enhanceable by Rm62Dem
      wa has phenotype, enhanceable by Rm62E
      wa has phenotype, enhanceable by Rm62F
      wa has phenotype, enhanceable by Rm62H
      wa has phenotype, enhanceable by Rm62K
      wa has phenotype, enhanceable by MowEMS
      wa has phenotype, enhanceable by Ufo1
      wa has phenotype, enhanceable by Wowγb
      wa has phenotype, enhanceable by Wowγe
      wa has phenotype, enhanceable by Wowems1
      wa has phenotype, enhanceable by Wowhd1
      wa has phenotype, enhanceable by E(wa)1
       
      wa has phenotype, enhanceable by E(wa)706E706
      wa has phenotype, enhanceable by E(wa)709E709
      wa has phenotype, enhanceable by E(wa)736E736
      wa has phenotype, enhanceable by E(wa)757E757
      wa has phenotype, enhanceable by E(wa)761E761
      wa has phenotype, enhanceable by E(wa)818E818
      wa has phenotype, enhanceable by Mowgamma
      wa has phenotype, enhanceable by su(f)8
      wa has phenotype, enhanceable by su(f)12
      hideNOT Enhanced by
      Statement
      Reference
      wa has phenotype, non-enhanceable by Kr-h105208rev
      wa has phenotype, non-enhanceable by mod(mdg4)ul
      wa has phenotype, non-enhanceable by Ts(YLt;2Lt)G120
      wa has phenotype, non-enhanceable by Ts(YLt;2Lt)H52+Ts(YLt;2Rt)J96
      wa has phenotype, non-enhanceable by Ts(YLt;2Rt)B110+Ts(YSt;2Lt)D20
      wa has phenotype, non-enhanceable by Ts(YLt;2Rt)D20+Ts(YSt;2Lt)G10
      wa has phenotype, non-enhanceable by Ts(YSt;2Lt)L23+Ts(YSt;2Rt)R155
      wa has phenotype, non-enhanceable by Ts(YSt;2Lt)A24+Ts(YLt;2Rt)L23
      wa has phenotype, non-enhanceable by Ts(YSt;2Lt)H149+Ts(YSt;2Rt)R14
      wa has phenotype, non-enhanceable by Dp(2;Y)J64
      wa has phenotype, non-enhanceable by Ts(YLt;2Rt)B202
      wa has phenotype, non-enhanceable by Ts(YLt;3Lt)B141
      wa has phenotype, non-enhanceable by Ts(Y;3Rt)J1+Ts(YSt;3Lt)L132
      wa has phenotype, non-enhanceable by Ts(YSt;2Rt)H52+Ts(YSt;2Lt)L52
      wa has phenotype, non-enhanceable by Ts(Y;3Lt)J1+Ts(YSt;3Rt)J162
      wa has phenotype, non-enhanceable by Ts(YSt;3Lt)B93+Ts(YSt;3Rt)B116
      wa has phenotype, non-enhanceable by Ts(YLt;3Rt)B93+Ts(YLt;3Lt)D100
      wa has phenotype, non-enhanceable by Ts(YLt;3Rt)B93+Ts(YLt;3Lt)G73
      hideSuppressed by
      Statement
      Reference
      wa has pigment cell phenotype, suppressible by Low1
      wa has phenotype, suppressible by Low1
      wa has phenotype, suppressible by In(3)Msu1
      wa has phenotype, suppressible by In(3)Msu2
      wa has phenotype, suppressible by Doa01705b
      wa has pigment cell phenotype, suppressible by RpLP001544
      wa has phenotype, suppressible by Su(wa4)M1
      sgl05007, wa has pigment cell phenotype, suppressible by wg1
      sgl05007, wa has pigment cell phenotype, suppressible by wgP
      wa has phenotype, suppressible by Ufo1
      wa has phenotype, suppressible by Inr-aEMS2
      wa has phenotype, suppressible by DoaHD
      wa has phenotype, suppressible by Doa3
      wa has phenotype, suppressible by Doa4
      wa has phenotype, suppressible by Doa5
      wa has phenotype, suppressible by Doa6
      wa has phenotype, suppressible by Doa7
      wa has phenotype, suppressible by Doa8
      wa has phenotype, suppressible by Doa9
      wa has phenotype, suppressible by su(wa)unspecified
       
      wa has phenotype, suppressible by Tp(2;3)P
       
      wa has phenotype, suppressible by DoaE755
      wa has phenotype, suppressible by DoaE777
      wa has phenotype, suppressible by DoaE786
      wa has phenotype, suppressible by DoaXP11
      wa has phenotype, suppressible by DoaXP28
      wa has phenotype, suppressible by E(wa)705E705
      wa has phenotype, suppressible by E(wa)829E829
      wa has phenotype, suppressible by Inr-aβb
      wa has phenotype, suppressible by Inr-aβc
      wa has phenotype, suppressible by Inr-aβd
      wa has phenotype, suppressible by Inr-aEMS3
      wa has phenotype, suppressible by Inr-aEMS4
      wa has phenotype, suppressible by Inr-aEMS5
      wa has phenotype, suppressible by Inr-ahd1
      wa has pigment cell phenotype, suppressible by Rga[+]/Rga03834
      wa has phenotype, suppressible by Inr-b1
      hideNOT suppressed by
      Statement
      Reference
      wa has phenotype, non-suppressible by mod(mdg4)ul
      wa has phenotype, non-suppressible by Ts(YLt;2Lt)G120
      wa has phenotype, non-suppressible by Ts(YLt;2Lt)H52+Ts(YLt;2Rt)J96
      wa has phenotype, non-suppressible by Ts(YLt;2Rt)B110+Ts(YSt;2Lt)D20
      wa has phenotype, non-suppressible by Ts(YLt;2Rt)D20+Ts(YSt;2Lt)G10
      wa has phenotype, non-suppressible by Ts(YSt;2Lt)L23+Ts(YSt;2Rt)R155
      wa has phenotype, non-suppressible by Ts(YSt;2Lt)A24+Ts(YLt;2Rt)L23
      wa has phenotype, non-suppressible by Ts(YSt;2Lt)H149+Ts(YSt;2Rt)R14
      wa has phenotype, non-suppressible by Dp(2;Y)J64
      wa has phenotype, non-suppressible by Ts(YLt;2Rt)B202
      wa has phenotype, non-suppressible by Ts(YLt;3Lt)B141
      wa has phenotype, non-suppressible by Ts(Y;3Rt)J1+Ts(YSt;3Lt)L132
      wa has phenotype, non-suppressible by Ts(YSt;2Rt)H52+Ts(YSt;2Lt)L52
      wa has phenotype, non-suppressible by Ts(Y;3Lt)J1+Ts(YSt;3Rt)J162
      wa has phenotype, non-suppressible by Ts(YSt;3Lt)B93+Ts(YSt;3Rt)B116
      wa has phenotype, non-suppressible by Ts(YLt;3Rt)B93+Ts(YLt;3Lt)D100
      wa has phenotype, non-suppressible by Ts(YLt;3Rt)B93+Ts(YLt;3Lt)G73
      wa has phenotype, non-suppressible by su(Hw)2
      hideEnhancer of
      Statement
      Reference
      wa/we(g) is an enhancer of pigment cell phenotype of g53d
      wa/we(g) is an enhancer of pigment cell phenotype of g2
      wa/we(g) is an enhancer of pigment cell phenotype of g50e
      hideSuppressor of
      Statement
      Reference
      wa/Low1 is a suppressor of phenotype of z1
      hideOther
      Statement
      Reference
      Low1, wa, z1 has eye phenotype
      Bpt1, Nfa-g, wa has eye phenotype
      hide Additional Comments
      hide Genetic Interactions
      Statement
      Reference
      Eye colour: lighter with bw1. Eye colour: light pinkish yellow with st1. Eye colour: not modified by v1.
      Heterozygote with homozygous v1 has slightly lighter eye colour than wild-type.
      Eye colour: lighter than either mutation alone with z1.
      mw1 dilutes, in a variegated fashion, the phenotype of wa.
      Eye colour: white in za parX1122 wa heterozygotes.
      Strength of enhancement: su(f)1 > su(f)12 > su(f)8 > su(f)4.
      Eye colour: wa rb66a flies have white eyes with a slight yellow tinge.
      w1 su(f)4/wa su(f)1 females have a w1 phenotype at 24-25oC. wa su(f)4/Y males have an eye colour intermediate between that of w1 and wa at 17-18oC. wa su(f)1 flies have apricot coloured eyes at 29-30oC, at 24-25oC the eyes are near white and at 17-18oC the eyes are indistinguishable from white.
      Shows mosaic suppression by In(3)Msu1/+ or In(3)Msu2/+: eyes have a mottled stripe of brilliant red at the posterior.
      Eye phenotype is suppressed by Ufo1.
      Eye colour: white in wa su(f)1.
      Flies with a wa/we(g) mutant genotype enhance the eye colour defective phenotype of g2, g50e and g53d homozygous mutants leading to a greater reduction of red pigment in the eye. wa, g53d male mutants have lower amounts of pigment in the eye than wa single mutants, leading to a change in eye colour from dull orange-red to completely white.
      Eye colour: the eye pigmentation level of w[a] flies is not affected by BEAF-32[AB-KO].
      hide Xenogenetic Interactions
      Statement
      Reference
      hide Complementation & Rescue Data
      Complements
       
      Partially complements
      Comments
      hide Stocks ( 206 )
      Bloomington
      148
      Kyoto
      105759
      101061
      105780
      101186
      105699
      101214
      hide Notes on Origin
      Discoverer
      Huestis, 1923.