Allele Dmel\wa
| General Information | |||
|---|---|---|---|
| Symbol | Dmel\wa | Species | D. melanogaster |
| Name | apricot | FlyBase ID | FBal0018195 |
| Feature type | allele | Created / Updated | 2006-05-14/2006-05-14 |
| Associated gene | Dmel\w | ||
| Allele class | hypomorph | ||
| Mutagen | spontaneous | ||
Nature of the Allele
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| Allele class | |||
| Mutagen | |||
| Mapped Features and Mutations | |||
Type Symbol & Location Additional Notes References | |||
| Associated Sequence Data | |||
| DDBJ
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EMBL / GenBank | DNA sequence Protein sequence Name | ||
| UniProtKB/Swiss-Prot | |||
| UniProtKB/TrEMBL | |||
| Progenitor genotype | |||
| Nature of the lesion | Statement Reference copia insertion at coordinate 0, using coordinate system of FBrf0038648 where coordinate 0 is the copia insert of wa. Insertion of copia element. The wa allele of the white locus has been cloned by retrieving previously cloned segments carrying a copy of the transposable element copia together with contiguous sequences (Bingham, Levis and Rubin, 1981; Gehring and Paro, 1980). Bingham and Judd (1981) have shown that copia homology is tightly linked to the site of wa, copia being located at coordinate 0.0 on the physical map of the white locus (Levis, Bingham and Rubin, 1982; Levis, O'Hare and Rubin, 1984) and inserted in the small second intron (Pirrotta and Brockl, 1984). The size of the copia insertion is 5 kb. A small amount of the normal 2.6 kb white transcript is also found in wa mutants. su(wa), which darkens the eyes of wa flies, results in a higher level of the 2.6 kb transcript, while su(f), which decreases the amount of pigment, results in a lower level of this transcript. Partial revertants of wa have been sequenced and found to retain one LTR of copia (Carbonare and Gehring, 1985; Mount et al., 1988; Zachar, Davison, Garza and Bingham, 1985b). 5.0 kb copia insertion map site (kb): 0 (by definition) Insertion of a copia element within the small intron. Insertion of copia element into the second intron. copia insertion in second chromosome. copia insertion into an intron. Insertion of a copia element. Parallel copia-element insertion in second intron. copia insertion into the second intervening sequence. 5.2kb parallel copia insertion into the second intron. Insertion of a copia element in the second intron, in parallel orientation. Insertion of a copia element into the second intron. Insertion of a 5.0 kb copia-element at map position 0.0 relative to the transcription start site of w. Antiparallel blood insertion into intron 2. copia insertion in the second intron. copia insertion into intron 2. | ||
| Assay mode | |||
| Caused by insertion | (Rabinow et al., 1993, Collins et al., 1983, Sabl and Birchler, 1993, Lim and Simmons, 1994, Flavell, 1999, Benevolenskaya et al., 2000, Bhadra et al., 1999, Zachar et al., 1985, Engels et al., 1990, Brierley and Flavell, 1990, Hiebert and Birchler, 1992, Birchler, 1992, Georgiev and Gerasimova, 1989, Rabinow et al., 1991, Gehring et al., 1984, Goldberg et al., 1983, Kurkulos et al., 1991, Lovering et al., 1991, Harden and Ashburner, 1990, Peng and Mount, 1990, Rabinow and Birchler, 1989, Carbonare and Gehring, 1985, Larsson et al., 1996, Peng and Mount, 1995, Bhadra and Birchler, 1996, Pal Bhadra et al., 1998, Lankenau, 1995, Roseman et al., 1995, Bhadra et al., 1997, Bhadra et al., 1997, Frolov et al., 1998, Zachar and Bingham, 1982) | ||
| Carried on aberration | |||
| Cytology | |||
Phenotypic Data
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Phenotypic Class
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Phenotype Manifest In
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pigment cell & adult | |||
Detailed Description
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Statement Reference Eye colour: yellowish with orange tone in males; lighter and somewhat yellower in females. Eye colour: mottled, with mw1. Eye colour: nearly white with rb1. Eye colour: nearly white with g1. Malpighian tubule colour: colourless. Eye colour: mottled, with mw1. A wa optic disk transplanted into a wild-type host shows autonomous eye color development. Eye colour: orange-brown. Enhanced by duplications of Doa+. Strong response to E(wa). Eye colour: orange. Eye colour: orange. Homozygous males are darker than homozygous females. Triple X metafemale individuals homozygous for wa exhibit dosage compensation of pigment levels. Eye colour: yellow-orange. wa is slightly dosage overcompensated in males conferring slightly more eye pigment. Modified by z mutations. Shows slight hyper dosage compensation. Homozygotes have dull orange eyes with only 3% red pigment (compared to 100% pigment in wild type). | |||
Interactions
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Phenotypic Class
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Enhanced by | |||
Statement Reference | |||
NOT Enhanced by | |||
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Suppressed by | |||
Statement Reference | |||
NOT suppressed by | |||
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Enhancer of | |||
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Other | |||
Statement Reference | |||
Phenotype Manifest In
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Enhanced by | |||
Statement Reference wa has phenotype, enhanceable by Ts(YLt;2Rt)L52+Ts(YLt;2Lt)R15 wa has phenotype, enhanceable by Ts(YSt;2Lt)B110+Ts(YSt;2Rt)R15 wa has phenotype, enhanceable by Ts(YLt;2Rt)G10+Ts(YLt;2Lt)R155 wa has phenotype, enhanceable by Ts(YLt;2Rt)A24+Ts(YLt;2Lt)B107 wa has phenotype, enhanceable by Ts(YSt;2Rt)B107+Ts(YLt;2Lt)L110 wa has phenotype, enhanceable by Ts(YLt;2Lt)R14+Ts(YSt;2Rt)L110 wa has phenotype, enhanceable by Ts(YSt;2Rt)L107+Ts(YSt;2Lt)P59 wa has phenotype, enhanceable by Ts(YSt;3Rt)B141+Ts(YSt;3Lt)G122 wa has phenotype, enhanceable by Ts(YLt;3Lt)A31+Ts(YLt;3Rt)G122 wa has phenotype, enhanceable by Ts(YSt;3Rt)L131+Ts(YSt;3Lt)R153 wa has phenotype, enhanceable by Ts(YLt;3Lt)B116+Ts(YLt;3Rt)G48 wa has phenotype, enhanceable by Ts(YSt;3Rt)G73+Ts(YSt;3Lt)R128 wa has phenotype, enhanceable by Ts(YLt;3Rt)R128 wa has phenotype, enhanceable by E(wa)706E706 wa has phenotype, enhanceable by E(wa)709E709 wa has phenotype, enhanceable by E(wa)736E736 wa has phenotype, enhanceable by E(wa)757E757 wa has phenotype, enhanceable by E(wa)761E761 wa has phenotype, enhanceable by E(wa)818E818 | |||
NOT Enhanced by | |||
Statement Reference wa has phenotype, non-enhanceable by Kr-h105208rev wa has phenotype, non-enhanceable by mod(mdg4)ul wa has phenotype, non-enhanceable by Ts(YLt;2Lt)G120 wa has phenotype, non-enhanceable by Ts(YSt;2Rt)G146+Ts(2Lt;4Lt)J96+Ts(YSt;4Rt)J96 wa has phenotype, non-enhanceable by Ts(YLt;2Lt)H52+Ts(YLt;2Rt)J96 wa has phenotype, non-enhanceable by Ts(YLt;2Rt)B110+Ts(YSt;2Lt)D20 wa has phenotype, non-enhanceable by Ts(YLt;2Rt)D20+Ts(YSt;2Lt)G10 wa has phenotype, non-enhanceable by Ts(YSt;2Lt)L23+Ts(YSt;2Rt)R155 wa has phenotype, non-enhanceable by Ts(YSt;2Lt)A24+Ts(YLt;2Rt)L23 wa has phenotype, non-enhanceable by Ts(YSt;2Lt)H149+Ts(YSt;2Rt)R14 wa has phenotype, non-enhanceable by Dp(2;Y)J64 wa has phenotype, non-enhanceable by Ts(YLt;2Rt)B202 wa has phenotype, non-enhanceable by Ts(YLt;3Lt)B141 wa has phenotype, non-enhanceable by Ts(Y;3Rt)J1+Ts(YSt;3Lt)L132 wa has phenotype, non-enhanceable by Ts(YSt;2Rt)H52+Ts(YSt;2Lt)L52 wa has phenotype, non-enhanceable by Ts(Y;3Lt)J1+Ts(YSt;3Rt)J162 wa has phenotype, non-enhanceable by Ts(YSt;3Lt)B93+Ts(YSt;3Rt)B116 wa has phenotype, non-enhanceable by Ts(YLt;3Rt)B93+Ts(YLt;3Lt)D100 wa has phenotype, non-enhanceable by Ts(YLt;3Rt)B93+Ts(YLt;3Lt)G73 | |||
Suppressed by | |||
Statement Reference wa has phenotype, suppressible by Ts(YLt;2Rt)H149+Ts(YLt;2Lt)L107 wa has phenotype, suppressible by Ts(YSt;3Rt)A31+Ts(YSt;3Lt)D228 wa has phenotype, suppressible by Ts(YSt;3Lt)G48+Ts(YSt;3Rt)R36 wa has phenotype, suppressible by su(wa)unspecified wa has phenotype, suppressible by E(wa)705E705 wa has phenotype, suppressible by E(wa)829E829 | |||
NOT suppressed by | |||
Statement Reference wa has phenotype, non-suppressible by mod(mdg4)ul wa has phenotype, non-suppressible by Ts(YLt;2Lt)G120 wa has phenotype, non-suppressible by Ts(YSt;2Rt)G146+Ts(2Lt;4Lt)J96+Ts(YSt;4Rt)J96 wa has phenotype, non-suppressible by Ts(YLt;2Lt)H52+Ts(YLt;2Rt)J96 wa has phenotype, non-suppressible by Ts(YLt;2Rt)B110+Ts(YSt;2Lt)D20 wa has phenotype, non-suppressible by Ts(YLt;2Rt)D20+Ts(YSt;2Lt)G10 wa has phenotype, non-suppressible by Ts(YSt;2Lt)L23+Ts(YSt;2Rt)R155 wa has phenotype, non-suppressible by Ts(YSt;2Lt)A24+Ts(YLt;2Rt)L23 wa has phenotype, non-suppressible by Ts(YSt;2Lt)H149+Ts(YSt;2Rt)R14 wa has phenotype, non-suppressible by Dp(2;Y)J64 wa has phenotype, non-suppressible by Ts(YLt;2Rt)B202 wa has phenotype, non-suppressible by Ts(YLt;3Lt)B141 wa has phenotype, non-suppressible by Ts(Y;3Rt)J1+Ts(YSt;3Lt)L132 wa has phenotype, non-suppressible by Ts(YSt;2Rt)H52+Ts(YSt;2Lt)L52 wa has phenotype, non-suppressible by Ts(Y;3Lt)J1+Ts(YSt;3Rt)J162 wa has phenotype, non-suppressible by Ts(YSt;3Lt)B93+Ts(YSt;3Rt)B116 wa has phenotype, non-suppressible by Ts(YLt;3Rt)B93+Ts(YLt;3Lt)D100 wa has phenotype, non-suppressible by Ts(YLt;3Rt)B93+Ts(YLt;3Lt)G73 | |||
Enhancer of | |||
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Suppressor of | |||
Statement Reference | |||
Other | |||
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Additional Comments
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Genetic Interactions
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Statement Reference Heterozygote with homozygous v1 has slightly lighter eye colour than wild-type. Eye colour: lighter than either mutation alone with z1. Eye phenotype is suppressed by Ufo1. wa shows an interaction with Df(2R)68-1, Df(2R)86-1, Df(2R)38-1, Df(2R)44-2, Df(2R)12-1, Df(2R)107-2 and Df(2R)157-1. Flies with a wa/we(g) mutant genotype enhance the eye colour defective phenotype of g2, g50e and g53d homozygous mutants leading to a greater reduction of red pigment in the eye. wa, g53d male mutants have lower amounts of pigment in the eye than wa single mutants, leading to a change in eye colour from dull orange-red to completely white. Eye colour: the eye pigmentation level of w[a] flies is not affected by BEAF-32[AB-KO]. | |||
Xenogenetic Interactions
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Statement Reference | |||
Complementation & Rescue Data
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| Complements | |||
| Partially complements | |||
| Comments | |||
Stocks
( 206 ) | |||
| Bloomington | 148 189 53 108 1715 | ||
| Kyoto | 105759 101061 105780 101186 105699 101214 | ||
Notes on Origin
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| Discoverer | Huestis, 1923. | ||
Nature of the Allele