A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Allele Dmel\zipEbr

General Information
SymbolDmel\zipEbrSpeciesD. melanogaster
NameFlyBase IDFBal0088529
Feature typealleleAssociated geneDmel\zip
Also Known AszipE(br), zipE(br)
Map ( GBrowse ) GBrowse View Helpdetailed view FBal0036093 FBal0018863 FBal0088529
Allele class
Mutagen
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Description
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FB2013_03
FB2013_02
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hide Nature of the Allele
Allele class
Mutagen
Mutations Mapped to the Genome
Type
Location
Additional Notes
References
point mutation
evidence=experimental
na_change=G20884587A
pr_change=R316H|zip-PB,R361H|zip-PA,R276H|zip-PC,R321H|z ip-PD
reported_na_change=G14374A
reported_pr_change=R276H
Associated Sequence Data
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
Progenitor genotype
Nature of the lesion
Statement
Reference
Amino acid replacement: R277H.
Nucleotide substitution: G14374A. Amino acid replacement: R276H. Nucleotide coordinates are relative to the sequence record U35816. Amino acid coordinates are relative to the transcript published in FBrf0052857.
Cytology
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Statement
Reference
zipEbr/zip02957 transheterozygotes are viable but have malformed wings with varying degrees of severity. Mutants also have rough eyes. In these retina the Mysoin-II system is disorganised . Some rhabdomeres have gaps along their lengths. Moreover, the rhabdomeres are not as straight as in wild-type, but appear to meander slightly. At the retinal floor of mutants, the hexagonal arrangement of the pigment cell pedicels exhibit irregularities, moreover, the retinal floor is not completely flattened but wrinkled in some areas.
zipEbr/zip33-1 animals have a severe leg malformation phenotype.
About 70% of zipEbr/zip02957 adults have malformed wings.
Mutants die as late embryos or early larvae.
Lethality acts post-embryonically.
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hideSuppressed by
Statement
Reference
Rho172BH, zipEbr has visible | dominant phenotype, suppressible by Mbs3
Rho172O, zipEbr has visible | dominant phenotype, suppressible | partially by Mbs3
RhoGEF204291, zipEbr has visible | dominant phenotype, suppressible by Mbs3
rok2, zipEbr has visible | dominant phenotype, suppressible by Mbs3
zip02957/zipEbr has visible phenotype, suppressible | partially by Mbs3/Mbs[+]
hideEnhancer of
Statement
Reference
zip[+]/zipEbr is an enhancer of visible | dominant phenotype of br1
zip[+]/zipEbr is an enhancer of visible | dominant phenotype of Sb63b
zip[+]/zipEbr is an enhancer of visible | dominant phenotype of Sb70
hideSuppressor of
Statement
Reference
zip[+], zipEbr, Scer\GAL4[-] is a suppressor of lethal | maternal effect | embryonic stage phenotype of Mbs3/Df(3L)th117, MbsEP3727
zip[+], zipEbr, Scer\GAL4[-] is a suppressor of lethal | maternal effect | embryonic stage phenotype of MbsEP3727/Df(3L)th117, Mbs3
zipEbr is a suppressor of lethal | recessive | larval stage phenotype of MoeG0323
hideOther
Statement
Reference
E(br)65Ebr65/E(br)65[+], zipEbr has visible phenotype
E(br)121Ebr121/E(br)121[+], zipEbr has visible phenotype
E(br)160[+]/E(br)160Ebr160, zipEbr has visible phenotype
E(br)444[+]/E(br)444Ebr444, zipEbr has visible phenotype
E(zip)12-5[+]/E(zip)12-512-5, zipEbr has visible phenotype
E(zip)18-5[+]/E(zip)18-518-5, zipEbr has visible phenotype
E(zip)31-631-6/E(zip)31-6[+], zipEbr has visible phenotype
Rho1[+]/Rho1Ebr246, zipEbr has visible phenotype
Rho112-6/Rho1[+], zipEbr has visible phenotype
Rho1Ebr233/Rho1[+], zipEbr has visible phenotype
RhoGEF21.1/RhoGEF2[+], zipEbr has visible phenotype
RhoGEF24.1/RhoGEF2[+], zipEbr has visible phenotype
RhoGEF211-3/RhoGEF2[+], zipEbr has visible phenotype
RhoGEF204291/RhoGEF2[+], zipEbr has visible phenotype
rok[+]/rok1, zipEbr has visible phenotype
rok[+]/rok2, zipEbr has visible phenotype
rok1, zip[+]/zipEbr has visible | dominant phenotype
rok2, zip[+]/zipEbr has visible | dominant phenotype
Sb[+]/Sb70, zipEbr has visible phenotype
Sb[+]/SbEbr20, zipEbr has visible phenotype
Sb[+]/SbEbr48, zipEbr has visible phenotype
Sb70, zip[+]/zipEbr has visible | dominant phenotype
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hideNOT Enhanced by
Statement
Reference
zipEbr has phenotype, non-enhanceable by Eip74EFDL-1
zipEbr has phenotype, non-enhanceable by Eip74EFneo24
zipEbr has phenotype, non-enhanceable by Khc8
zipEbr has phenotype, non-enhanceable by l(2)52FbD2.33
zipEbr has phenotype, non-enhanceable by l(2)52FcD8.13
zipEbr has phenotype, non-enhanceable by l(2)52FdE3.27
zipEbr has phenotype, non-enhanceable by l(2)52FeE6.17
hideSuppressed by
Statement
Reference
Rho172BH, zipEbr has wing phenotype, suppressible by Mbs3
Rho172O, zipEbr has wing phenotype, suppressible | partially by Mbs3
RhoGEF204291, zipEbr has wing phenotype, suppressible by Mbs3
rok2, zipEbr has wing phenotype, suppressible by Mbs3
zip02957/zipEbr has wing phenotype, suppressible | partially by Mbs3/Mbs[+]
hideEnhancer of
Statement
Reference
zip[+]/zipEbr is an enhancer of leg phenotype of br1
zip[+]/zipEbr is an enhancer of leg phenotype of Sb63b
zip[+]/zipEbr is an enhancer of leg phenotype of Sb70
hideOther
Statement
Reference
E(br)65Ebr65, zip[+]/zipEbr has leg phenotype
Rho112-6, zip[+]/zipEbr has leg phenotype
Rho112-6, zip[+]/zipEbr has wing phenotype
Rho172BH/Rho1[+], zipEbr has wing phenotype
Rho172F, zip[+]/zipEbr has leg phenotype
Rho172F, zip[+]/zipEbr has wing phenotype
Rho172O, zip[+]/zipEbr has leg phenotype
Rho172O/Rho1[+], zipEbr has wing phenotype
Rho1E3.10, zip[+]/zipEbr has leg phenotype
Rho1E3.10, zip[+]/zipEbr has wing phenotype
Rho1Ebr233, zip[+]/zipEbr has leg phenotype
Rho1Ebr246, zip[+]/zipEbr has leg phenotype
Rho1J3.8, zip[+]/zipEbr has leg phenotype
RhoGEF211-3, zip[+]/zipEbr has leg phenotype
RhoGEF211-3, zip[+]/zipEbr has wing phenotype
RhoGEF204291/RhoGEF2[+], zipEbr has wing phenotype
rok[+]/rok2, zipEbr has wing phenotype
rok1, zip[+]/zipEbr has leg phenotype
rok1, zip[+]/zipEbr has wing phenotype
rok2, zip[+]/zipEbr has leg phenotype
Sb70, zip[+]/zipEbr has wing phenotype
SbEbr20, zip[+]/zipEbr has leg phenotype
SbEbr48, zip[+]/zipEbr has leg phenotype
SbEbr448, zip[+]/zipEbr has leg phenotype
SbEbr536, zip[+]/zipEbr has leg phenotype
SbEbr623, zip[+]/zipEbr has leg phenotype
hide Additional Comments
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Statement
Reference
The frequency of the malformed leg phenotype seen in Sb63b/+ heterozygotes (8%) is increased if the flies are also heterozygous for zipEbr (63%). The frequency of the malformed leg phenotype seen in Sb70/+ heterozygotes (7%) is increased if the flies are also heterozygous for zipEbr (96%). The frequency of the malformed leg phenotype seen in br1/Y males (1%) is increased if the flies are also heterozygous for zipEbr (56%).
zipEbr shows no interaction with sqhunspecified (assayed in terms of a malformed leg phenotype). zipEbr shows a strong interaction (at least 50% of double heterozygotes have at least one malformed leg) with the following mutations: RhoGEF211-3, E(zip)12-512-5 and Rho112-6. zipEbr shows a moderate interaction (25-49% of double heterozygotes have at least one malformed leg) with the following mutations: E(zip)18-518-5. zipEbr shows a weak interaction (5-24% of double heterozygotes have at least one malformed leg) with the following mutations: E(zip)31-631-6. zipEbr shows a strong interaction (at least 50% of double heterozygotes have at least one malformed wing) with the following mutations: rok1, Sb70, RhoGEF211-3, E(zip)12-512-5, Rho112-6 and E(zip)31-631-6. zipEbr shows a moderate interaction (25-49% of double heterozygotes have at least one malformed wing) with the following mutations: E(zip)18-518-5.
The fraction of flies showing a malformed leg phenotype in at least one leg, for zipEbr in double heterozygous combination with one of the following alleles is - SbEbr20: 46%, SbEbr48: 30%, SbEbr228: 14%, SbEbr448: 57%, SbEbr536: 33%, SbEbr623: 26%, Rho1Ebr233: 93%, Rho1Ebr246: 83%, bsEbr292: 2%, E(br)24Ebr24: 9%, E(br)65Ebr65: 67%, E(br)155Ebr155: 7%, E(br)165Ebr165: 6%, E(br)333Ebr333: 4%, E(br)72Ebr72: 4%, E(br)121Ebr121: 82%, E(br)160Ebr160: 20%, E(br)187Ebr187: 6%, E(br)420Ebr420: 15% and E(br)444Ebr444: 84%.
The lethality of Mbs mutant embryos derived from MbsEP3727/Df(3L)th117 females mated to Mbs3/+ males is suppressed by zipEbr/+.
27% of RhoGEF24.1/zipEbr double heterozygotes have a malformed leg phenotype, which shows variable expressivity. In less severe cases, there is a dent in the femur or tibia. Flies with malformed legs often also show wing defects. Weak phenotypes include a broadening of the wing blade and folding back of the distal portion of the wing blade. In the most severe cases, wings are greatly reduced in size. 38% of RhoGEF204291/zipEbr double heterozygotes have a malformed leg phenotype. 33% of RhoGEF21.1/zipEbr double heterozygotes have a malformed leg phenotype. 100% of Rho1J3.8/zipEbr double heterozygotes have a malformed leg phenotype. 100% of Rho1E3.10/zipEbr double heterozygotes have a malformed leg phenotype, which shows variable expressivity. In more severe cases, a dent and twisting of the femur is apparent, along with shortening and thickening of the tibia. Notching of the posterior region of the wing blade is also seen. 96% of Rho172F/zipEbr double heterozygotes have a malformed leg phenotype. Wing defects are also seen. Weak phenotypes include a broadening of the wing blade and folding back of the distal portion of the wing blade. In more severe cases, wings lacking adhesion between the wing blade bilayer and any apparent wing venation are seen. 92% of Rho172O/zipEbr double heterozygotes have a malformed leg phenotype. 90% of Df(2R)Jp4/zipEbr double heterozygotes have a malformed leg phenotype. 98% of Df(2R)Jp8/zipEbr double heterozygotes have a malformed leg phenotype.
Produces malformed phenotype when in double heterozygosis with second site zip non-complementing mutants. Shows a higher level of penetrance with second site non-complementers than does zipmhc-c6.1.
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hide Synonyms & Secondary IDs ( 6 )
Reported As
Symbol Synonym
Name Synonym
Secondary FlyBase IDs
hide References ( 17 )
Research paper
Baumann, 2004, Dev. Biol. 269(2): 519--533
Spatial pattern of nonmuscle myosin-II distribution during the development of the Drosophila compound eye and implications for retinal morphogenesis. [FBrf0174531]
Chen et al., 2004, Curr. Biol. 14(4): 309--313
Rho-LIM kinase signaling regulates ecdysone-induced gene expression and morphogenesis during Drosophila metamorphosis. [FBrf0174477]
Bayer et al., 2003, Genetics 165(3): 1417--1432
Genetic interactions between the RhoA and Stubble-stubbloid loci suggest a role for a type II transmembrane serine protease in intracellular signaling during Drosophila imaginal disc morphogenesis. [FBrf0167640]
Speck et al., 2003, Nature 421(6918): 83--87
Moesin functions antagonistically to the Rho pathway to maintain epithelial integrity. [FBrf0155521]
Ward et al., 2003, Genetics 165(3): 1397--1415
Genetic modifier screens in Drosophila demonstrate a role for Rho1 signaling in ecdysone-triggered imaginal disc morphogenesis. [FBrf0167639]
Mizuno et al., 2002, Development 129(5): 1215--1223
Drosophila myosin phosphatase and its role in dorsal closure. [FBrf0144821]
Halsell et al., 2000, Genetics 155(3): 1253--1265
Genetic analysis demonstrates a direct link between rho signaling and nonmuscle myosin function during Drosophila morphogenesis. [FBrf0128483]
Halsell and Kiehart, 1998, Genetics 148(4): 1845--1863
Second-site noncomplementation identifies genomic regions required for Drosophila nonmuscle myosin function during morphogenesis. [FBrf0102325]
Gotwals and Fristrom, 1991, Genetics 127: 747--759
Three neighboring genes interact with the Broad-Complex and the Stubble-stubbloid locus to affect imaginal disc morphogenesis in Drosophila. [FBrf0054179]
Review
Hawley and Gilliland, 2006, Genetics 174(1): 5--15
Sometimes the result is not the answer: The truths and the lies that come from using the complementation test. [FBrf0194489]
Abstract
Farkas et al., 2007, Europ. Dros. Res. Conf. 20: G029
CHROMATIN ACCESS OF TRANSCRIPTION AND REMODELLING FACTORS IS REGULATED BY CYTOSKELETAL PROTEINS DURING ECDYSONE-TRIGGERED CELL DEATH IN DROSOPHILA. [FBrf0199865]
Farkas et al., 2006, A. Dros. Res. Conf. 47: 747B
Modulation of chromatin access for transcription and remodelling factors by cytoskeletal proteins during ecdysone-triggered cell death of Drosophila salivary glands. [FBrf0189425]
Farkas et al., 2003, Europ. Dros. Res. Conf. 18: C22
Chromatin access of Drosophila transcription and remodelling factors regulated by cytoskeletal proteins. [FBrf0161719]
Swain and Kiehart, 2002, A. Dros. Res. Conf. 43: 235A
A Genetic Screen for Novel Myosin II and Rho Pathway Interactors. [FBrf0146483]
Williams et al., 2001, A. Dros. Res. Conf. 42: 233B
Molecular genetic analysis reveals the role of non-muscle myosin II activity and localization during morphogenesis. [FBrf0134243]
Halsell and Kiehart, 2000, A. Dros. Res. Conf. 41: 452A
Nonmuscle myosin-II requires Rho signal transduction to drive morphogenetic cell shape change. [FBrf0126613]
Halsell and Kiehart, 1999, A. Dros. Res. Conf. 40: 323A
Morphogenesis driven by nonmuscle myosin-II requires function of the Rho signal transduction pathway. [FBrf0106598]