A Database of Drosophila Genes & Genomes

FB2008_06, released July 3, 2008
 

Clone Dmel\SD04011

General Information
Symbol Dmel\SD04011 Species D. melanogaster
Name SD04011 FlyBase ID FBcl0285757
Feature type cDNA_clone Created / Updated 2005-11-02/2006-08-19
Computed gene(s) Dmel\RhoGAP16F
Collection Status BDGP
Known Problems none
Library SD
Strain
Tissue Source cultured cell-line
Vector pOT2  
hide Sequence Data of the Insert
Full Length Sequence
Total bases 1970
GenBank AY052089
Full Length sequence data GCGCCGCGGGATTCGTGGCACACGAGAGACGCCAGCCCGGAAAGACCCTG
ATGAATTGCTTTCGCGATCGCTCCACGACGTCGTCGTCATCGTCGCAGGC
CCAACACGCCTATGTGCGCGGCCACAGCGTCACCTCGAGCACTCTGTTTC
GCCTGGAGGGCAGTGGTGGCTCCAATTGCACCTTGGACAAGGCGGGCAAG
CAGGATACCGGGCGGCCCGAGGCGGTCGTCCTACTCAGAGAGCTGAAAAC
CAGACCCAACAAGCTGGCTCTGCTCAAGAGCAGCAGCAGCAAGGATCTGA
CCCGCCTGTTCCTGGACGATTCAACCAACACAGCCGTGCTGGTGTCCAAC
ACCAGTATAGATGTCTGCTCCTCAAATTCCAGCTCTGGCGGCAGTCCGGC
GGTGGGCAGGTCCAAGTCCGGCAGGGATCGCCGCAATGGACTGGAGTGCT
GCAGCAGCTGCTCCAAGCGTTGGCACGATCTCAAGCAGCGTATGCACACT
CTGGAGCAGGATCTGCTCGTCCAGACCACATACAGCCAAGAGCTGGAGCA
GAAGGTGGGCGAGATGAGTCGCCAGTTGACGGAACTGCTTCAGGAACGCG
ACAGGGAGAGGGATAAGGATAAGGCGCGCTTTGCAGCCGCAGGCGGCGTT
GCTGCGCCTGGCAAGCGGACTGCTCACGGCAGTCCCAATGTCCGACCCTC
GCGCCTGGTGGCCTGGATGAACCTGTCCAACTGGTTCAAGAGCAGACCCA
GCGTGGAAACGCTGCGGGAACAGCGCATCTTCTTCGACGAGCCCTGCTTC
GATACGGAACTGGAGATGGTCCTCAAGCACGACCAGCACCGCACTGTGCC
GCGCATCGTTGTGGATTGCTGCGATCTAATCGAGCAAAAGTACCGCAGAT
CTACGCAGCCCATCGAGGGCATCTATCGGCAGTGCGGCGACTACAATAAA
ATCCAAACGCTGCGCTTCAGCATCGACGCCAACGACTACGATTCACTGCG
TCAGCCGGACGTCGATATACACACGTTGACCGGTGTGCTTAAGCTCTTCC
TGCGCGAAATCAAGAGTCCGTTGGTCAGTGTCAACGAGGCCAAGACCTTC
ATTGGACAGCCCAATCAGTGGTTGTTAACCGATCTGTCTGCGAAGTTGGA
CTCCCTGAAAAGACTGATTCGTTCGCTGCCGGAGAGCAACCGGGACACCA
TGGACTACATCTTCGGTCACTTCAATAGAATAACCAAGGTGCCGCTGCAG
CAGATCAGCGCTGAAACGCTGTCCATATCGGTGACGCCGTCGATCTTTCA
CACGGTGCCACAGGGCGTCCACATGCAGGACATCCAGCAACTTTTGCGCG
AGGGCGAAACGCTGGCCGACTGCGTCAAGCTGATGATCGAGTACCAGGGG
CGCATATTCGAGTAAGTGCGAGCCCCGCTGAGGAGGAACAGCCCCAGTCT
CCCAGGTGATGGTCCATTTGGTGTCCGGGCGCCCGCCGCTACTGTTACCC
ACAAAACCCGAATCCCAGCCGCTTACGTCTCATCCAAACCGCTCACCTAC
TGTGCCGTTGTGTCGAACGCTTTGCTAACCACTCGAAATCCGAAATCCTC
AACCCGAAACCGAACACCCCACTGTACCTGCCACACCTCTATACCCATTC
CCGATTCGCTCCCGAATCTGTTTCCAATCCCGATCACATCGTCTACAGAT
GCACCGCCGATCGCCGCCGCCTGAGCATGCGCAACCTAAAGAAGACTCTG
TCGCAGCCGGACCTGCTCTTTCACAATCTATTCTGAGCTGGCCCAATGAC
ATCCAATGGATCCTTCATCCCAGAGAGAGCACTGTACATATATGGAATGA
CTTTACGCCCCGCTAGCAATTGTGTCCTAAGATTACTTTTTATATTCTTA
CTTTATCAACTAACTTTTGTACTTATGTTTACTAATATAAACACTAAAAC
TAAAAAAAAAAAAAAAAAAA
hide Library Information
Comments
  • The SD library was made from RNA extracted from Drosophila tissue culture cells. mRNA source: non-isogenic Schneider L2 cells, polyA+ selected once. oligo(dT) primed with XhoI site at end of primer for first strand synthesis; EcoRI adapter on 5' ends of clones; size fractionated on Sephacryl S-500--approximately 1-6kb. cDNA directionally cloned into EcoRI/XhoI-digested pOT2 plasmid. ~300,000 colonies were plated out and a mass plasmid DNA prep was done using Qiagen Plasmids containing the cDNA inserts were size selected on Sephacryl S-500 column in order to exclude plasmids with no insert. Early elutions were collected and transformed into DH5 alpha strain (Gibco/BRL).
hide Library Synonyms
Reported As
Symbol Synonym
hide Library References
Review
Rubin et al., 2000, Science 287(5461): 2222--2224
A Drosophila complementary DNA resource. [FBrf0127297]
hide Synonyms & Secondary IDs ( 0 )
Reported As
Symbol Synonym
Secondary FlyBase IDs
hide References ( 0 )
Review
Rubin et al., 2000, Science 287(5461): 2222--2224
A Drosophila complementary DNA resource. [FBrf0127297]