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General Information
Symbol
Dmel\IP08939
Species
D. melanogaster
Name
IP08939
FlyBase ID
FBcl0293750
Feature type
Computed gene(s)
 
Collection Status
BDGP
Known Problems
none
FlyBase assessment
  • Caution: This cDNA clone replaced by FI17807
Library
IP_cDNA
  • IP cDNA library of D. melanogaster, isolated by an inverse-PCR screen (SLIP) from other cDNA libraries.
Strain
    Vector
    Tissue Source
    Stage
    Tissue/Position (including subcellular localization)
    Reference
    Sequence Data of the Insert
    Full Length Sequence
    Total bases
    3,001
    NCBI
    Full Length sequence dataSequence Downloader
    AAAAACTCTCGAACTTGGAAATAATTTCAAATTTTCGGAAAGCCCCAAAAAATATATGACAGTGTTGCAAAACAGCCCAA
    AATCAAATATTTCGGTGTGCAAAAAGTAAAATTTTTGAAAAAGACGCAAGCGAAAAGTCACAGATCAGTCAACAAACAAC
    AAGAACAACCAGCAACAAACAAAAACAACAGCAAGCTAAAAACAACAACAAGAACAGCAACTGCAACAAACAACAATCCA
    AAATCGACGAAGACGACGGCCCCCGACAAAAATCAATTGGAAAATTGAAACTTATGGATTGCTGGACGGGTAACGCCCGA
    CTGGCGAGTGTTTTAGTTTAAGCAGCGTAAGCTGTCACCGACATGGGCAGTGAGCACTACTGCTTGAGGTGGAACAATTA
    CCAATCCAACCTGTTAGGGGTGTTTAGTCAATTACTACAAGACGGGAGCCTGGTGGACGTCACACTAGTTTGTTCAGAGG
    GCACATCCATCAGAGCCCATAAGGTGGTCCTCTCGGCTTGTTCCTCGTACTTCCAGAGCCTGTTCCTGGAGCACCCCGAA
    GGACATCTAATTGTGATATTGAAGGACGTCCGTTGCCGAGCTGCAAACCTTAGTTGAATTCATGTACAAGGGCGAGGTGA
    ACGTGCAATATTGTCAGTTGTCCGCGCTGCTCAAGACAGCCGAATCCCTCAAGGTCAAGGGCCTGGCCGAGATGACGAAC
    CAGAATACGACGCTGCGCGAACCGGAACGGGAACCGGATCGCTTGCGTCCGCAGGGCGGCGGCGGTAGCGGCGGATCCGC
    CCACAAGGCGGCCGACAGTCCGGCGGCCGCGCTTGATGCCACAGCGGCCACACAGGCGGCGACTGCCACGGCAACGGCAA
    CTGCCGCGGCGGCAACATCGACCTCAACCTCAGCAACATCTGCGGCGGCGACGGCAGCAGCGACAGCAGCAACATCTGCG
    TCCACAACGGCAACGGCGGCGGCGGGGAGTAGTAATACAACAACTACAACGGCGGCAACCACAACAGCAACCTGTGCCAC
    AGCAGCAACATCTACGGCAGCAACATCCTCATCTTCGTCCGTGACATCAGCAGCAGCAGCCGCAGCAGCAGCCGCATCAG
    CATCTGGTGTTGCGCACTCGGAGGAGGCGACCTCGTCATCATCGTCAACTGGCGGGCAGAAGCGGGAGGCTAGCGATCGC
    AGCAGTCCCACGCCCGCCAAACGATCGTCGCGAATGCATCCGGCGGACAAGGTGGATGTGGCAGAGGATCGGGAACAGGA
    GCAAAACCAGGCGGACGAGCTGCTAAGCGAGGAGCTGCTCGGTCGCAACTTAAAGGACGAGGAGGATGACGATGTGGATG
    AGCTAGATGAGAACGAGGAGACGAAGCTGAGGGGTCGCGATGAGGACGATGACGACGAGGATGAGGAGGAGGACACGCCC
    ATGCCATTGGATCTCTATCAAAGACCAAATGTCGAGCCAAAAAGCGCCGCAGCAGCAACAGCAGCGCAGCAGGGCGGCAG
    CAACAGTCTCAGCGGTAGCAGCAACGCTTGCCACACCAACAGCAGCAGCAACAGCAATAATAACAATAACAACAACAACA
    ACTCCAGCAGCAACAACAACAACAACACTAGTAGTGGGAAAACCTCAGCGTCCAGCAATGGCGGCACAGCATCATCGGGC
    GGCACAGCGGACTCCGTGGTTGCGGTAGATGACGATGACGACGACGACGATGGTGGCCATCATCATCAGCGACAGGTGAT
    GGACGATCGATTGGAGCAGGATGTGGACGAAGAGGATCTGGACGATGATGTCGTGGTGGTGGGACCTGCCACCGCGATGG
    CCAGGGGCATTGCCCAGCGGCTGGCCCACCAGAACCTGCAGCGTCTCCATCACACGCACCACCATGCCCAGCACCAGCAT
    TCGCAGCACCACCACCCACATTCGCAGCACCACCATACGCCGCACCACCAGCAGCACCATACGCACTCGGATGACGAGGA
    TGCCATGCCCGTGATTGCCAAGAGCGAGATCCTCGACGATGACTACGACGATGAGATGGATCTGGAGGATGACGATGAGG
    CGGACAACAGCAGCAACGATTTGGGTCTCAACATGAAAATGGGCAGCGGCGGTGCGGGCGGCGGCGGTGGCGTAGATCTG
    TCCACCGGCTCCACATTGATACCCTCGCCATTGATCACCCTGCCATCCTCATCGGCGGCGGCGGCGGCAGCTGCAGCGGC
    AGCAATGGAATCGCAGCGCTCCACGCCGGCCATGTCGGCGGCCCAGGCAGCTGGAGCGGGCGCCTCGGACCTCAGTATTG
    GTGGCTGCGGCGGTCGACCGGCGTCCAGGAGCTCACGCGACGGCGGCGGTAACGATGGCGGCAGGGGAGGAGCATCCTCC
    TCCAGCCTGCTTAGCCCGGGAACCGTGGCCAATCTCCTGCCCGTGCAATCGGTGCCATTGAGTCTCAAGAAGGAGATCGA
    TTGCAGCGAGGACGACAATAGCAGTCACAGCAGACACATGCAACAGCGTTCGGCATCAGCTGGCGGCGGCCTGGGCGGCG
    ACCTTGACTACCGCGCCTCCCACGAGTCGGTAAGTCTGCGATTTGGCGATAACTTTGACCCTGGCCCAAGCCCTGACCCC
    GCCCCTGAATTCCCACCTCTGAAAATACGATTCGAAACGAACCCCTGCCAAAATTCGAAAAGAAACTCCAGTCCCAGGAG
    ATGCCTTTCAGTGAATGCTTTTGCTGCTTCGATAGGTTAAAAAAAAAAAAAAAATTAAAGATAAAATATCTAACGAATTC
    CGAGATGCGTCTCGCAAAAATAGATCTATCTGATCCCAATCTGGCTCGATCCGACTCCATTTCTACATATGTATATGTAT
    ATCTTTATCTTAAGTATTGCTCTCTCTCTCTGTCTGTTCTTATATATATATATACATCAATATGCCATATTTATATATAT
    TTAATTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    
    Library Information (1)
    Library: IP_cDNA
    Description

    Clones isolated by an inverse-PCR screen (SLIP) using a mixture of the GH, LD, LP, and SD cDNA libraries.

    Sample preparation

    Adult heads were collected from an isogenic y; cn bw sp (iso-1) strain.

    Protocol

    These clones have been isolated a directed screening process called SLIP (Self-Ligation of Inverse PCR Products). Clones isolated from this screen have been PCR-amplified using a mixture of 4 different plasmid cDNA libraries as template. These include the GH, LD, LP, and SD cDNA libraries.

    Comment
    Reported As
    Symbol Synonyms
    IP
    IP_cDNA
    References (1)
    FlyBase analysis (1)
    FlyBase Curators, 2016-, Curation of large dataset metadata by FlyBase.
    Curation of large dataset metadata by FlyBase. [FBrf0232540]
    External Crossreferences and Linkouts ( 1 )
    Linkouts
    DGRC - Stock center for Drosophila cDNAs, vectors, and cell lines
    Synonyms and Secondary IDs (0)
    Reported As
    Symbol Synonym
    Secondary FlyBase IDs
      References (0)