A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\Act5C

General Information
SymbolDmel\Act5CSpeciesD. melanogaster
NameActin 5CAnnotation symbolCG4027
Feature typeprotein_coding_geneFlyBase IDFBgn0000042
Gene Model StatusCurrent Stock availability 49 publicly available
Also Known AsActin, BAP47, Actin5C, A, Act, l(1)G0079, l(1)G0117, l(1)G0025
Genomic Location
Chromosome (arm)XRecombination map1-
Cytogenetic map5C7-5C7Sequence locationX:5,794,897..5,798,823 [+]

Genomic Maps

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modENCODE GBrowse
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Automatically generated summary

See sections below for more information
The gene Actin 5C is referred to in FlyBase by the symbol Dmel\Act5C (CG4027, FBgn0000042). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: structural constituent of cytoskeleton. There is experimental evidence that it is involved in the biological process: sperm individualization; inter-male aggressive behavior; cytokinesis; mushroom body development; maintenance of protein location in cell; phagocytosis, engulfment. 64 alleles are reported. The phenotypes of these alleles are annotated with: germline cyst; trichome; eye; trichogen cell; border follicle cell; arista; macrochaeta; anterior crossvein; mushroom body alpha-lobe; mushroom body alpha'-lobe. It has 4 annotated transcripts and 4 annotated polypeptides. Protein features are: Actin, conserved site; Actin-like; Actin/actin-like conserved site. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of very high expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: virgin spermatheca. Comments on Affy2 ProbeSet: ProbeSet 1626163_s_at completely aligns to an exonic region common to each of the 4 FlyBase-annotated transcript isoforms of Act5C. Gene sequence location is X:5794897..5798823.

hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
Act5C: Actin in region 5C
Codes for cytoplasmic actin; transcribed throughout development; one of two actin genes transcribed in Kc cells and several other cell lines (Fyrberg, Mahaffy, Bond, and Davidson, 1983, Cell 33: 115-23). One of three actin genes expressed in the wing disc during wing development, each with its characteristic profile. Peak expression at 44h of pupal age, little or no expression at 60h rising again at 80h. 44h peak corresponds to time of maximum change in cell shape (Peterson, Bond, Mitchell, and Davidson, 1985, Dev. Genet. 5: 219-25). Transcripts present in the preblastoderm embryo suggesting maternal transcription; during blastoderm formation, Act5C transcripts accumulate at the periphery of the embryo; local concentrations of transcript observed in anterior and posterior midgut rudiments in stage 13 embryos; hybridization also observed in the developing ventral nervous system. Later in embryogenesis, transcript found in all tissues but with dramatic concentrations of transcripts in the anterior and posterior midgut and the proventriculus. Exon specific probes demonstrate that transcripts containing exon 1 tend to be concentrated in anterior portions of early embryos, including the anterior midgut primordium and the proventriculus, as well as in the posterior midgut primordium; during germ-band extension, small local concentrations of exon 2 transcripts are seen in posterior and ventral regions of the embryo (Burn, Vigoreaux, and Tobin, 1989, Dev. Biol. 131: 345-55).
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
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FB2011_10
References
FB2012_01
References
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
5C7-5C7  
Limits computationally determined from genome sequence between P{EP}CG15770EP390 and P{EP}Act5CEP1604&P{EP}EP444  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
5C3-5C6  
(determined by in situ hybridisation) 5C5--8 (determined by in situ hybridisation) 5D1--2 (determined by in situ hybridisation) 5C3--8 (determined by in situ hybridisation) 5C5--6 (determined by in situ hybridisation) 5C5--10 (determined by in situ hybridisation)  
5C5-5C10  
(determined by in situ hybridisation) 5C5--8 (determined by in situ hybridisation)  
5C3-5C8  
(determined by in situ hybridisation) 5C5--8 (determined by in situ hybridisation)  
5C5-5C8  
(determined by in situ hybridisation) 5C5--6 (determined by in situ hybridisation) 5C3--9 (determined by in situ hybridisation) 5D1--2 (determined by in situ hybridisation)  
5C3-5C6  
(determined by in situ hybridisation) 5C5--8 (determined by in situ hybridisation)  
5C-5C  
(determined by in situ hybridisation)  
5C-5C  
(determined by in situ hybridisation)  
5C-5C  
(determined by in situ hybridisation)  
5C-5C  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\Act5C for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0100662 FBtr0070822 FBtr0100663 FBtr0070823 FBtr0070824 FBpp0100124 FBpp0100125 FBpp0070788 FBpp0070787 FBpp0070789 FBti0076054 FBti0036379 FBti0028578 FBti0052762 FBti0069640 FBti0071842 FBti0068796 FBti0068954 FBti0068922 FBti0068461 FBti0058729 FBti0102435 FBti0028152 FBti0012818 FBti0035603 FBti0109467 FBti0030207 FBti0076919 FBti0035177 FBti0057687 FBti0035719 FBti0035164 FBti0012846 FBti0034167 FBti0068761 FBti0058917 FBti0053955 FBti0028985 FBti0028990 FBti0030202 FBti0107704 FBti0057321 FBti0029702 FBti0059343 FBti0030214 FBti0038468 FBti0007519 FBti0007490 FBti0013225 FBti0011874 FBti0021236 FBti0028314 FBti0111855 FBti0015691 FBti0013163 FBti0013889 FBti0013189 FBti0015635 FBti0071897 FBti0036351 FBti0028847 FBti0059441 FBti0007316
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0070822
  1638
  376
FBtr0070823
  1605
  376
FBtr0100662
  2251
  376
FBtr0100663
  1928
  376
Additional Transcript Data & Comments
Reported size (kB)
1.97 (northern blot)
1.9, 1.77 (northern blot)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0070787  
41.8  
376  
5.16  
FBpp0070788  
41.8  
376  
5.16  
FBpp0100124  
41.8  
376  
5.16  
FBpp0100125  
41.8  
376  
5.16  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
The brm core complex appears to comprise 10 polypeptides. These include brm, mor, osa, Bap60, Snr1, dalao, Bap55, Bap170, Bap26,and Act42A or Act5C proteins.
The BRM complex was purified from Drosophila embryos using two distinct purification protocols and the subunit composition was determined. Eight major proteins were consistently observed including brm, Snr1, Bap55 (a novel actin-related protein), Bap60, dalao, Hsc70-4, and mor proteins. The complex also contains a cytoplasmic actin (Act42A or Act5C).
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
PDB - Protein Data Bank. An information portal to biological macromolecular structures
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
 
 
 
 
 
 
 
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
protein binding site
protein binding site
protein binding site
protein binding site
protein binding site
hide External Data
Linkouts
Crossreferences
EPD - Eukarytoic Promoter Database, an annotated collection of POL II promoters
hide Expression Data
hideTranscript Expression
No Assay Recorded
Stage
Tissue/Position (including subcellular localization)
Reference
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view Act5C-RC Act5C-RA Act5C-RD Act5C-RB
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0000042


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0000042
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of very high expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in adult female stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0000042 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 134731
embryo 02-04hr
 
 203450
embryo 04-06hr
 
 180669
embryo 06-08hr
 
 141371
embryo 08-10hr
 
 145187
embryo 10-12hr
 
 154433
embryo 12-14hr
 
 110550
embryo 14-16hr
 
 120289
embryo 16-18hr
 
 99835
embryo 18-20hr
 
 124278
embryo 20-22hr
 
 200750
embryo 22-24hr
 
 176152
larva L1
 
 129768
larva L2
 
 171259
larva L3 12hr old
 
 102395
larva L3 puffstage 1-2
 
 96090
larva L3 puffstage 3-6
 
 132881
larva L3 puffstage 7-9
 
 196219
white prepupae new
 
 231334
white prepupae 12hr
 
 193580
white prepupae 24hr
 
 179394
pupae 2d postWPP
 
 172484
pupae 3d postWPP
 
 36485
pupae 4d postWPP
 
 140139
adult male 01day
 
 54971
adult male 05day
 
 53731
adult male 30day
 
 62922
adult female 01day
 
 108398
adult female 05day
 
 110064
adult female 30day
 
 107245
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (134731)
embryo 02-04hr
 (203450)
embryo 04-06hr
 (180669)
embryo 06-08hr
 (141371)
embryo 08-10hr
 (145187)
embryo 10-12hr
 (154433)
embryo 12-14hr
 (110550)
embryo 14-16hr
 (120289)
embryo 16-18hr
 (99835)
embryo 18-20hr
 (124278)
embryo 20-22hr
 (200750)
embryo 22-24hr
 (176152)
larva L1
 (129768)
larva L2
 (171259)
larva L3 12hr old
 (102395)
larva L3 puffstage 1-2
 (96090)
larva L3 puffstage 3-6
 (132881)
larva L3 puffstage 7-9
 (196219)
white prepupae new
 (231334)
white prepupae 12hr
 (193580)
white prepupae 24hr
 (179394)
pupae 2d postWPP
 (172484)
pupae 3d postWPP
 (36485)
pupae 4d postWPP
 (140139)
adult male 01day
 (54971)
adult male 05day
 (53731)
adult male 30day
 (62922)
adult female 01day
 (108398)
adult female 05day
 (110064)
adult female 30day
 (107245)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (134731)
embryo 02-04hr
 (203450)
embryo 04-06hr
 (180669)
embryo 06-08hr
 (141371)
embryo 08-10hr
 (145187)
embryo 10-12hr
 (154433)
embryo 12-14hr
 (110550)
embryo 14-16hr
 (120289)
embryo 16-18hr
 (99835)
embryo 18-20hr
 (124278)
embryo 20-22hr
 (200750)
embryo 22-24hr
 (176152)
larva L1
 (129768)
larva L2
 (171259)
larva L3 12hr old
 (102395)
larva L3 puffstage 1-2
 (96090)
larva L3 puffstage 3-6
 (132881)
larva L3 puffstage 7-9
 (196219)
white prepupae new
 (231334)
white prepupae 12hr
 (193580)
white prepupae 24hr
 (179394)
pupae 2d postWPP
 (172484)
pupae 3d postWPP
 (36485)
pupae 4d postWPP
 (140139)
adult male 01day
 (54971)
adult male 05day
 (53731)
adult male 30day
 (62922)
adult female 01day
 (108398)
adult female 05day
 (110064)
adult female 30day
 (107245)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 (134731)
embryo 02-04hr
 (203450)
embryo 04-06hr
 (180669)
embryo 06-08hr
 (141371)
embryo 08-10hr
 (145187)
embryo 10-12hr
 (154433)
embryo 12-14hr
 (110550)
embryo 14-16hr
 (120289)
embryo 16-18hr
 (99835)
embryo 18-20hr
 (124278)
embryo 20-22hr
 (200750)
embryo 22-24hr
 (176152)
larva L1
 (129768)
larva L2
 (171259)
larva L3 12hr old
 (102395)
larva L3 puffstage 1-2
 (96090)
larva L3 puffstage 3-6
 (132881)
larva L3 puffstage 7-9
 (196219)
white prepupae new
 (231334)
white prepupae 12hr
 (193580)
white prepupae 24hr
 (179394)
pupae 2d postWPP
 (172484)
pupae 3d postWPP
 (36485)
pupae 4d postWPP
 (140139)
adult male 01day
 (54971)
adult male 05day
 (53731)
adult male 30day
 (62922)
adult female 01day
 (108398)
adult female 05day
 (110064)
adult female 30day
 (107245)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 134731
embryo 02-04hr
 
 203450
embryo 04-06hr
 
 180669
embryo 06-08hr
 
 141371
embryo 08-10hr
 
 145187
embryo 10-12hr
 
 154433
embryo 12-14hr
 
 110550
embryo 14-16hr
 
 120289
embryo 16-18hr
 
 99835
embryo 18-20hr
 
 124278
embryo 20-22hr
 
 200750
embryo 22-24hr
 
 176152
larva L1
 
 129768
larva L2
 
 171259
larva L3 12hr old
 
 102395
larva L3 puffstage 1-2
 
 96090
larva L3 puffstage 3-6
 
 132881
larva L3 puffstage 7-9
 
 196219
white prepupae new
 
 231334
white prepupae 12hr
 
 193580
white prepupae 24hr
 
 179394
pupae 2d postWPP
 
 172484
pupae 3d postWPP
 
 36485
pupae 4d postWPP
 
 140139
adult male 01day
 
 54971
adult male 05day
 
 53731
adult male 30day
 
 62922
adult female 01day
 
 108398
adult female 05day
 
 110064
adult female 30day
 
 107245
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0000042 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 134731
embryo 02-04hr
 
 203450
embryo 04-06hr
 
 180669
embryo 06-08hr
 
 141371
embryo 08-10hr
 
 145187
embryo 10-12hr
 
 154433
embryo 12-14hr
 
 110550
embryo 14-16hr
 
 120289
embryo 16-18hr
 
 99835
embryo 18-20hr
 
 124278
embryo 20-22hr
 
 200750
embryo 22-24hr
 
 176152
larva L1
 
 129768
larva L2
 
 171259
larva L3 12hr old
 
 102395
larva L3 puffstage 1-2
 
 96090
larva L3 puffstage 3-6
 
 132881
larva L3 puffstage 7-9
 
 196219
white prepupae new
 
 231334
white prepupae 12hr
 
 193580
white prepupae 24hr
 
 179394
pupae 2d postWPP
 
 172484
pupae 3d postWPP
 
 36485
pupae 4d postWPP
 
 140139
adult male 01day
 
 54971
adult male 05day
 
 53731
adult male 30day
 
 62922
adult female 01day
 
 108398
adult female 05day
 
 110064
adult female 30day
 
 107245
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (134731)
embryo 02-04hr
 (203450)
embryo 04-06hr
 (180669)
embryo 06-08hr
 (141371)
embryo 08-10hr
 (145187)
embryo 10-12hr
 (154433)
embryo 12-14hr
 (110550)
embryo 14-16hr
 (120289)
embryo 16-18hr
 (99835)
embryo 18-20hr
 (124278)
embryo 20-22hr
 (200750)
embryo 22-24hr
 (176152)
larva L1
 (129768)
larva L2
 (171259)
larva L3 12hr old
 (102395)
larva L3 puffstage 1-2
 (96090)
larva L3 puffstage 3-6
 (132881)
larva L3 puffstage 7-9
 (196219)
white prepupae new
 (231334)
white prepupae 12hr
 (193580)
white prepupae 24hr
 (179394)
pupae 2d postWPP
 (172484)
pupae 3d postWPP
 (36485)
pupae 4d postWPP
 (140139)
adult male 01day
 (54971)
adult male 05day
 (53731)
adult male 30day
 (62922)
adult female 01day
 (108398)
adult female 05day
 (110064)
adult female 30day
 (107245)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (134731)
embryo 02-04hr
 (203450)
embryo 04-06hr
 (180669)
embryo 06-08hr
 (141371)
embryo 08-10hr
 (145187)
embryo 10-12hr
 (154433)
embryo 12-14hr
 (110550)
embryo 14-16hr
 (120289)
embryo 16-18hr
 (99835)
embryo 18-20hr
 (124278)
embryo 20-22hr
 (200750)
embryo 22-24hr
 (176152)
larva L1
 (129768)
larva L2
 (171259)
larva L3 12hr old
 (102395)
larva L3 puffstage 1-2
 (96090)
larva L3 puffstage 3-6
 (132881)
larva L3 puffstage 7-9
 (196219)
white prepupae new
 (231334)
white prepupae 12hr
 (193580)
white prepupae 24hr
 (179394)
pupae 2d postWPP
 (172484)
pupae 3d postWPP
 (36485)
pupae 4d postWPP
 (140139)
adult male 01day
 (54971)
adult male 05day
 (53731)
adult male 30day
 (62922)
adult female 01day
 (108398)
adult female 05day
 (110064)
adult female 30day
 (107245)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 (134731)
embryo 02-04hr
 (203450)
embryo 04-06hr
 (180669)
embryo 06-08hr
 (141371)
embryo 08-10hr
 (145187)
embryo 10-12hr
 (154433)
embryo 12-14hr
 (110550)
embryo 14-16hr
 (120289)
embryo 16-18hr
 (99835)
embryo 18-20hr
 (124278)
embryo 20-22hr
 (200750)
embryo 22-24hr
 (176152)
larva L1
 (129768)
larva L2
 (171259)
larva L3 12hr old
 (102395)
larva L3 puffstage 1-2
 (96090)
larva L3 puffstage 3-6
 (132881)
larva L3 puffstage 7-9
 (196219)
white prepupae new
 (231334)
white prepupae 12hr
 (193580)
white prepupae 24hr
 (179394)
pupae 2d postWPP
 (172484)
pupae 3d postWPP
 (36485)
pupae 4d postWPP
 (140139)
adult male 01day
 (54971)
adult male 05day
 (53731)
adult male 30day
 (62922)
adult female 01day
 (108398)
adult female 05day
 (110064)
adult female 30day
 (107245)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 134731
embryo 02-04hr
 
 203450
embryo 04-06hr
 
 180669
embryo 06-08hr
 
 141371
embryo 08-10hr
 
 145187
embryo 10-12hr
 
 154433
embryo 12-14hr
 
 110550
embryo 14-16hr
 
 120289
embryo 16-18hr
 
 99835
embryo 18-20hr
 
 124278
embryo 20-22hr
 
 200750
embryo 22-24hr
 
 176152
larva L1
 
 129768
larva L2
 
 171259
larva L3 12hr old
 
 102395
larva L3 puffstage 1-2
 
 96090
larva L3 puffstage 3-6
 
 132881
larva L3 puffstage 7-9
 
 196219
white prepupae new
 
 231334
white prepupae 12hr
 
 193580
white prepupae 24hr
 
 179394
pupae 2d postWPP
 
 172484
pupae 3d postWPP
 
 36485
pupae 4d postWPP
 
 140139
adult male 01day
 
 54971
adult male 05day
 
 53731
adult male 30day
 
 62922
adult female 01day
 
 108398
adult female 05day
 
 110064
adult female 30day
 
 107245
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0000042


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0000042
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: virgin spermatheca.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0000042 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 2751.075
Larval Midgut
 
 5596.2
Larval Hindgut
 
 4448.9
Larval Malpighian Tubules
 
 4343.7
Larval Fat Body
 
 4931.8
Larval Salivary Gland
 
 6272.7
Larval Trachea
 
 6010.925
Larval Carcass
 
 3247.15
Adult Head
 
 1986.1
Adult Eye
 
 2342.925
Adult Brain
 
 2410.8
Adult Thoracic-Abdominal Ganglion
 
 2293.8
Adult Crop
 
 2055
Adult Midgut
 
 5158.9
Adult Hindgut
 
 4217.5
Adult Malpighian Tubules
 
 3871
Adult Fat Body
 
 1205.3
Adult Salivary Gland
 
 5980
Adult Heart
 
 2024.325
Adult VirginFemale Spermatheca
 
 371
Adult InseminatedFemale Spermatheca
 
 666.9
Adult Ovary
 
 2377
Adult Testis
 
 1718.8
Adult Male Accessory Gland
 
 2306.9
Adult Carcass
 
 1612.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (2751.075)
Larval Midgut
 (5596.2)
Larval Hindgut
 (4448.9)
Larval Malpighian Tubules
 (4343.7)
Larval Fat Body
 (4931.8)
Larval Salivary Gland
 (6272.7)
Larval Trachea
 (6010.925)
Larval Carcass
 (3247.15)
Adult Head
 (1986.1)
Adult Eye
 (2342.925)
Adult Brain
 (2410.8)
Adult Thoracic-Abdominal Ganglion
 (2293.8)
Adult Crop
 (2055)
Adult Midgut
 (5158.9)
Adult Hindgut
 (4217.5)
Adult Malpighian Tubules
 (3871)
Adult Fat Body
 (1205.3)
Adult Salivary Gland
 (5980)
Adult Heart
 (2024.325)
Adult VirginFemale Spermatheca
 
 371
Adult InseminatedFemale Spermatheca
 (666.9)
Adult Ovary
 (2377)
Adult Testis
 (1718.8)
Adult Male Accessory Gland
 (2306.9)
Adult Carcass
 (1612.6)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 (2751.075)
Larval Midgut
 (5596.2)
Larval Hindgut
 (4448.9)
Larval Malpighian Tubules
 (4343.7)
Larval Fat Body
 (4931.8)
Larval Salivary Gland
 (6272.7)
Larval Trachea
 (6010.925)
Larval Carcass
 (3247.15)
Adult Head
 (1986.1)
Adult Eye
 (2342.925)
Adult Brain
 (2410.8)
Adult Thoracic-Abdominal Ganglion
 (2293.8)
Adult Crop
 (2055)
Adult Midgut
 (5158.9)
Adult Hindgut
 (4217.5)
Adult Malpighian Tubules
 (3871)
Adult Fat Body
 (1205.3)
Adult Salivary Gland
 (5980)
Adult Heart
 (2024.325)
Adult VirginFemale Spermatheca
 
 371
Adult InseminatedFemale Spermatheca
 
 666.9
Adult Ovary
 (2377)
Adult Testis
 (1718.8)
Adult Male Accessory Gland
 (2306.9)
Adult Carcass
 (1612.6)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 2751.075
Larval Midgut
 
 5596.2
Larval Hindgut
 
 4448.9
Larval Malpighian Tubules
 
 4343.7
Larval Fat Body
 
 4931.8
Larval Salivary Gland
 
 6272.7
Larval Trachea
 
 6010.925
Larval Carcass
 
 3247.15
Adult Head
 
 1986.1
Adult Eye
 
 2342.925
Adult Brain
 
 2410.8
Adult Thoracic-Abdominal Ganglion
 
 2293.8
Adult Crop
 
 2055
Adult Midgut
 
 5158.9
Adult Hindgut
 
 4217.5
Adult Malpighian Tubules
 
 3871
Adult Fat Body
 
 1205.3
Adult Salivary Gland
 
 5980
Adult Heart
 
 2024.325
Adult VirginFemale Spermatheca
 
 371
Adult InseminatedFemale Spermatheca
 
 666.9
Adult Ovary
 
 2377
Adult Testis
 
 1718.8
Adult Male Accessory Gland
 
 2306.9
Adult Carcass
 
 1612.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0000042 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 2751.075
Larval Midgut
 
 5596.2
Larval Hindgut
 
 4448.9
Larval Malpighian Tubules
 
 4343.7
Larval Fat Body
 
 4931.8
Larval Salivary Gland
 
 6272.7
Larval Trachea
 
 6010.925
Larval Carcass
 
 3247.15
Adult Head
 
 1986.1
Adult Eye
 
 2342.925
Adult Brain
 
 2410.8
Adult Thoracic-Abdominal Ganglion
 
 2293.8
Adult Crop
 
 2055
Adult Midgut
 
 5158.9
Adult Hindgut
 
 4217.5
Adult Malpighian Tubules
 
 3871
Adult Fat Body
 
 1205.3
Adult Salivary Gland
 
 5980
Adult Heart
 
 2024.325
Adult VirginFemale Spermatheca
 
 371
Adult InseminatedFemale Spermatheca
 
 666.9
Adult Ovary
 
 2377
Adult Testis
 
 1718.8
Adult Male Accessory Gland
 
 2306.9
Adult Carcass
 
 1612.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (2751.075)
Larval Midgut
 (5596.2)
Larval Hindgut
 (4448.9)
Larval Malpighian Tubules
 (4343.7)
Larval Fat Body
 (4931.8)
Larval Salivary Gland
 (6272.7)
Larval Trachea
 (6010.925)
Larval Carcass
 (3247.15)
Adult Head
 (1986.1)
Adult Eye
 (2342.925)
Adult Brain
 (2410.8)
Adult Thoracic-Abdominal Ganglion
 (2293.8)
Adult Crop
 (2055)
Adult Midgut
 (5158.9)
Adult Hindgut
 (4217.5)
Adult Malpighian Tubules
 (3871)
Adult Fat Body
 (1205.3)
Adult Salivary Gland
 (5980)
Adult Heart
 (2024.325)
Adult VirginFemale Spermatheca
 
 371
Adult InseminatedFemale Spermatheca
 666.9
Adult Ovary
 (2377)
Adult Testis
 (1718.8)
Adult Male Accessory Gland
 (2306.9)
Adult Carcass
 (1612.6)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 (2751.075)
Larval Midgut
 (5596.2)
Larval Hindgut
 (4448.9)
Larval Malpighian Tubules
 (4343.7)
Larval Fat Body
 (4931.8)
Larval Salivary Gland
 (6272.7)
Larval Trachea
 (6010.925)
Larval Carcass
 (3247.15)
Adult Head
 (1986.1)
Adult Eye
 (2342.925)
Adult Brain
 (2410.8)
Adult Thoracic-Abdominal Ganglion
 (2293.8)
Adult Crop
 (2055)
Adult Midgut
 (5158.9)
Adult Hindgut
 (4217.5)
Adult Malpighian Tubules
 (3871)
Adult Fat Body
 1205.3
Adult Salivary Gland
 (5980)
Adult Heart
 (2024.325)
Adult VirginFemale Spermatheca
 
 371
Adult InseminatedFemale Spermatheca
 
 666.9
Adult Ovary
 (2377)
Adult Testis
 1718.8
Adult Male Accessory Gland
 (2306.9)
Adult Carcass
 1612.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 2751.075
Larval Midgut
 
 5596.2
Larval Hindgut
 
 4448.9
Larval Malpighian Tubules
 
 4343.7
Larval Fat Body
 
 4931.8
Larval Salivary Gland
 
 6272.7
Larval Trachea
 
 6010.925
Larval Carcass
 
 3247.15
Adult Head
 
 1986.1
Adult Eye
 
 2342.925
Adult Brain
 
 2410.8
Adult Thoracic-Abdominal Ganglion
 
 2293.8
Adult Crop
 
 2055
Adult Midgut
 
 5158.9
Adult Hindgut
 
 4217.5
Adult Malpighian Tubules
 
 3871
Adult Fat Body
 
 1205.3
Adult Salivary Gland
 
 5980
Adult Heart
 
 2024.325
Adult VirginFemale Spermatheca
 
 371
Adult InseminatedFemale Spermatheca
 
 666.9
Adult Ovary
 
 2377
Adult Testis
 
 1718.8
Adult Male Accessory Gland
 
 2306.9
Adult Carcass
 
 1612.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 1986.1
 
NA 
Eye
 
 2342.925
 
NA 
Brain
 
 2410.8
 
2751.075 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 2293.8
 
NA 
Crop
 
 2055
 
5596.2 
Midgut
 
 5158.9
 
4448.9 
Hindgut
 
 4217.5
 
4343.7 
Malpighian Tubules
 
 3871
 
4931.8 
Fat Body
 
 1205.3
 
6272.7 
Salivary Gland
 
 5980
 
NA 
Heart
 
 2024.325
 
6010.925 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 371
 
NA 
InseminatedFemale Spermatheca
 
 666.9
 
NA 
Ovary
 
 2377
 
NA 
Testis
 
 1718.8
 
NA 
Male Accessory Gland
 
 2306.9
 
3247.15 
Carcass
 
 1612.6

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
border follicle cell & filopodium
hide Classical Alleles ( 46 )
For All Classical Alleles Show

Allele of Act5CClassMutagenStocksKnown lesion
Act5CG00092 --
Act5CG00102 --
Act5CG00252 --
Act5CG01172 --
Act5CG01772 --
Act5CG03302 --
Act5CG04202 --
Act5CNP3121
2 --
Act5C5-HA-1759
1 --
Act5C5-SZ-3664
1 --
Act5C5-SZ-3675
1 --
Act5C5-SZ-3690
1 --
Act5CCB-0512-3
1 --
Act5CCB-0914-3
1 --
Act5CCB-6320-3
1 --
Act5CCB-6327-3
1 --
Act5CCB-6835-3
1 --
Act5Cd002211 --
Act5Cd116181 --
Act5CEY119691 --
Act5CG00791 --
Act5CG02451 --
Act5CG04861 --
Act5CGS5216
1 --
Act5CKG008981 --
Act5CNP1084
1 --
Act5CNP3105
1 --
Act5CNP5090
1 --
Act5C24580 Yes
Act5C32670 Yes
Act5C34470 Yes
Act5C36270 Yes
Act5C5-HA-2981
0 --
Act5CBG012990 Yes
Act5Cd026730 --
Act5CEP13310 --
Act5CEP14400 --
Act5CEP15690 --
Act5CEP16040 Yes
Act5CG04940 --
Act5CGS11310 Yes
Act5CNP4022
0 --
Act5CNP4103
0 --
Act5CPBss0 Yes
Act5CPG280 --
Act5CPG400 --
hide Alleles Carried on Transgenic Constructs ( 18 )
For All Alleles Carried on Transgenic Constructs Show

Allele of Act5CClassMutagenStocksKnown lesion
Act5CScer\UAS.P\T.T:Avic\GFP5 Yes
Act5CScer\UAS.P\T.T:Disc\RFP-mRFP3 Yes
Act5CGD13512 Yes
Act5CScer\UAS.P\T.R.T:Avic\GFP2 Yes
Act5CKK1091611 Yes
Act5C+t10.5.ΔBgl0 Yes
Act5C+t10.50 Yes
Act5C+t9.40 Yes
Act5CBam0 Yes
Act5CdsRNA.cRa0 Yes
Act5CH264Q.cWa0 Yes
Act5CMtnA.T:Avic\GFP-EGFP0 Yes
Act5CRI0 Yes
Act5CScer\UAS.T:Avic\GFP-S65T0 Yes
Act5CScer\UAS.T:Avic\GFP0 Yes
Act5CScer\UAS.T:Disc\RFP-mRFP
0 Yes
Act5Cslbo.T:Avic\GFP-EGFP0 Yes
Act5CtXX6.40 Yes
hide Aneuploid Aberrations
Disrupted in
Duplicated in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
vital-reporter construct
Insertions
Type of insertions
Name
Expression data
hide Gene Ontology: Function, Process & Cellular Component ( 13 unique terms )
hide Terms Based on Experimental Evidence ( 9 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
inferred from mutant phenotype
inferred from expression pattern
Cellular Component
CV term
References
inferred from direct assay
hide Terms Based on Predictions or Assertions ( 4 terms )
Molecular Function
CV term
References
inferred from electronic annotation with InterPro:IPR004001
Biological Process
CV term
References
inferred from sequence or structural similarity
Cellular Component
CV term
References
inferred from sequence or structural similarity
non-traceable author statement
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
Act5C allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
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hide Stocks Listed in FlyBase ( 49 )
Bloomington
Harvard
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 248 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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Source for database identity of
Source for database merge of
Source for merge of: Act5C anon-EST:fe2D2
Source for merge of: Act5C l(1)G0009
Source for merge of: Act5C l(1)G0079 l(1)G0330 l(1)G0025 l(1)G0117 l(1)G0420 l(1)G0010 l(1)G0177 l(1)G0245 l(1)G0486
Additional comments
The Act5C gene may be derived from the Act57B gene by retroposition.
"l(1)G0449" may affect "Act5C".
hide Other Comments
DNA-protein interactions: genome-wide binding profile assayed for Act5C protein in Kc167 cells; see Chromatin_types_NKI collection report. Individual protein-binding experiments listed under "Samples" at GEO_GSE22069 (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE22069).
S2 cells treated with dsRNA generated against this gene show reduced phagocytosis of Candida albicans compared to untreated cells.
dsRNA directed against this gene causes defects in cytokinesis when tested in an RNAi screen in S2 cells.
RNAi screen using dsRNA made from templates generated with primers directed against this gene causes a binucleation phenotype with microtubule extensions when assayed in Kc167 cells.
Act5C has a role in the individualisation during spermatogenesis.
Age related changes in Act5C expression have been studied by Northern analysis.
Ecdysteroid-regulated gene.
The level of Act5C RNA remains fairly constant throughout the D.melanogaster life span.
Analysis of Act5C promoter activation shows that one cis-acting region in P\Tcore and two such regions in P\TKP and P\TKP' elements are associated with activation only when the 20bp sequence around the Zw transcription start site is placed in front of the Act5C promoter. In vitro transcription analysis of P\T sequences activating Zw-Act5C transcriptional gene reveals three distinct cis-acting regions, one in P\Tcore and two in the P\TKP and P\TKP' elements, that are required for overexpression. Putative transcriptional regulatory proteins, identified in gel retardation assays, bind to each of the cis-acting regions.
Nascent chain nuclear run-on assays in KC161 cells reveal different responses to heat shock for different genes. Transcription of His1 is severely inhibited under mild heat shocks, of Act5C decreases proportionally with increasing temperature while that of the core histone genes or the heat shock cognates is repressed only under extreme heat shock. Increased transcription of the heat shock genes is observed within 1-2 mins of heat shock and maximal rates were reached within 2-5 minutes. Rates of transcription vary over a 20-fold range.
Act5C promoter driven expression is just as efficient in D.melanogaster embryos and in L.cuprina embryos.
Sequence analysis demonstrates insect muscle actins form a distinct family of closely related proteins significantly diverged from cytoplasmic actins.
Translation of actin RNA in early embryos injected with initiation factors has been studied.
Nuclear extracts prepared from developmentally staged embryos were transcriptionally active for several non-muscle genes: Tm2 non-muscle promoter, Act5C, ftz, Adh and en.
Detailed analysis of the proximal promoter and the elements required for its function.
The expression of HIS-C genes during oogenesis has been studied, and compared to periods of DNA synthesis and actin expression during this developmental stage.
Codes for cytoplasmic actin; transcribed throughout development; one of two actin genes transcribed in Kc cells and several other cell lines (FBrf0038990). One of three actin genes expressed in the wing disc during wing development, each with its characteristic profile. Peak expression at 44h of pupal age, little or no expression at 60h rising again at 80h. 44h peak corresponds to time of maximum change in cell shape (FBrf0042391). Transcripts present in the preblastoderm embryo suggesting maternal transcription; during blastoderm formation, Act5C transcripts accumulate at the periphery of the embryo; local concentrations of transcript observed in anterior and posterior midgut rudiments in stage 13 embryos; hybridization also observed in the developing ventral nervous system. Later in embryogenesis, transcript found in all tissues but with dramatic concentrations of transcripts in the anterior and posterior midgut and the proventriculus. Exon specific probes demonstrate that transcripts containing exon 1 tend to be concentrated in anterior portions of early embryos, including the anterior midgut primordium and the proventriculus, as well as in the posterior midgut primordium; during germ-band extension, small local concentrations of exon 2 transcripts are seen in posterior and ventral regions of the embryo (FBrf0049492). A ecdysone regulated gene (FBrf0064343). The Act5C distal promoter is often used in constructs to give 'constitutive' expression of a sequence under its control.
 
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
EPD - Eukarytoic Promoter Database, an annotated collection of POL II promoters
InterPro domains - A database of protein families, domains, and functional sites
PDB - Protein Data Bank. An information portal to biological macromolecular structures
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
REDfly - A database of transcriptional regulatory elements.
hide Synonyms & Secondary IDs ( 43 )
Reported As
Symbol Synonym
anon-EST:fe2D2
 
β-actin/Bap47
Name Synonym
anon-fast-evolving-2D2
 
cellular cytoskeletal β-actin
Secondary FlyBase IDs
  • FBgn0025223
  • FBgn0026673
  • FBgn0026683
  • FBgn0026712
  • FBgn0027215
  • FBgn0027255
  • FBgn0027284
  • FBgn0027327
  • FBgn0028278
  • FBgn0040144
  • FBgn0040204
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hide Recent research papers ( 28 )
Adamson et al., 2011, Genetics 189(2): 495--506
A Drosophila model for genetic analysis of influenza viral/host interactions. [FBrf0216397]
Chan et al., 2011, Genetics 188(1): 33--44
Insect Population Control by Homing Endonuclease-Based Gene Drive: An Evaluation in Drosophila melanogaster. [FBrf0213627]
Cherbas et al., 2011, Genome Res. 21(2): 301--314
The transcriptional diversity of 25 Drosophila cell lines. [FBrf0213077]
Clark et al., 2011, Development 138(13): 2705--2715
Fibroblast growth factor signalling controls successive cell behaviours during mesoderm layer formation in Drosophila. [FBrf0213889]
Ezzeddine et al., 2011, Mol. Cell. Biol. 31(2): 328--341
A Subset of Drosophila Integrator Proteins Is Essential for Efficient U7 snRNA and Spliceosomal snRNA 3'-End Formation. [FBrf0212592]
Hijazi et al., 2011, PLoS ONE 6(3): e17763
The ly6 protein coiled is required for septate junction and blood brain barrier organisation in Drosophila. [FBrf0213269]
Jin et al., 2011, Dev. Cell 20(5): 623--638
Competition between Blown Fuse and WASP for WIP Binding Regulates the Dynamics of WASP-Dependent Actin Polymerization In Vivo. [FBrf0213682]
Koppen et al., 2011, Proteomics 11(22): 4397--4410
Proteomics analyses of microvesicles released by Drosophila Kc167 and S2 cells. [FBrf0216610]
Kuzina et al., 2011, Development 138(9): 1839--1849
How Notch establishes longitudinal axon connections between successive segments of the Drosophila CNS. [FBrf0213493]
Ling and Salvaterra, 2011, PLoS ONE 6(3): e17762
Robust RT-qPCR Data Normalization: Validation and Selection of Internal Reference Genes during Post-Experimental Data Analysis. [FBrf0213272]
Meyer et al., 2011, Curr. Biol. 21(6): 485--491
Interkinetic nuclear migration is a broadly conserved feature of cell division in pseudostratified epithelia. [FBrf0213254]
Blanco et al., 2010, BMC Dev. Biol. 10: 94
Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812]
Ducka et al., 2010, Proc. Natl. Acad. Sci. U.S.A. 107(26): 11757--11762
Structures of actin-bound Wiskott-Aldrich syndrome protein homology 2 (WH2) domains of Spire and the implication for filament nucleation. [FBrf0215010]
Filion et al., 2010, Cell 143(2): 212--224
Systematic protein location mapping reveals five principal chromatin types in Drosophila cells. [FBrf0212051]
He et al., 2010, Nat. Cell Biol. 12(12): 1133--1142
Tissue elongation requires oscillating contractions of a basal actomyosin network. [FBrf0212453]
Kazgan et al., 2010, Mol. Biol. Cell 21(19): 3433--3442
Identification of a nuclear export signal in the catalytic subunit of AMP-activated protein kinase. [FBrf0211940]
Mastushita-Sakai et al., 2010, Proc. Natl. Acad. Sci. U.S.A. 107(26): 11987--11992
Drosophila Orb2 targets genes involved in neuronal growth, synapse formation, and protein turnover. [FBrf0211209]
Mathur et al., 2010, Science 327(5962): 210--213
A transient niche regulates the specification of Drosophila intestinal stem cells. [FBrf0209706]
Monier et al., 2010, Nat. Cell Biol. 12(1): 60--65
An actomyosin-based barrier inhibits cell mixing at compartmental boundaries in Drosophila embryos. [FBrf0209576]
Ninov et al., 2010, Curr. Biol. 20(6): 513--520
Dpp signaling directs cell motility and invasiveness during epithelial morphogenesis. [FBrf0210385]
Park et al., 2010, Biochim. biophys. Acta 1799(7): 510--519
Regulation of the Drosophila p38b gene by transcription factor DREF in the adult midgut. [FBrf0211129]
Pataki et al., 2010, Genetics 184(4): 1051--1065
Drosophila Rab23 is involved in the regulation of the number and planar polarization of the adult cuticular hairs. [FBrf0210720]
Pauli et al., 2010, Curr. Biol. 20(20): 1787--1798
A direct role for cohesin in gene regulation and ecdysone response in Drosophila salivary glands. [FBrf0212124]
Repiso et al., 2010, Development 137(20): 3411--3415
Planar cell polarity: the orientation of larval denticles in Drosophila appears to depend on gradients of Dachsous and Fat. [FBrf0211889]
Saulière et al., 2010, Nat. Struct. Mol. Biol. 17(10): 1269--1271
The exon junction complex differentially marks spliced junctions. [FBrf0212018]
Spain et al., 2010, J. Biol. Chem. 285(35): 27457--27467
Drosophila SIN3 isoforms interact with distinct proteins and have unique biological functions. [FBrf0211588]
Wang et al., 2010, Dev. Cell 18(1): 157--164
Spatial Restriction of FGF Signaling by a Matrix Metalloprotease Controls Branching Morphogenesis. [FBrf0209956]
Wasbrough et al., 2010, J. Proteomics 73(11): 2171--2185
The Drosophila melanogaster sperm proteome-II (DmSP-II). [FBrf0211978]
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All reviews listed in FlyBase were published before 2010