A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene Dmel\Argk

General Information
SymbolDmel\ArgkSpeciesD. melanogaster
NameArginine kinaseAnnotation symbolCG32031
Feature typeprotein_coding_geneFlyBase IDFBgn0000116
Gene Model StatusCurrent Stock availability 12 publicly available
Also Known AsCG4929, AK, ARK
Genomic Location
Chromosome (arm)3LRecombination map3-25.2
Cytogenetic map66F3-66F4Sequence location3L:9,041,980..9,059,127 [-]

Genomic Maps

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Automatically generated summary

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The gene Arginine kinase is referred to in FlyBase by the symbol Dmel\Argk (CG32031, FBgn0000116). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: arginine kinase activity. Based on sequence similarity, it is predicted to be involved in the biological process: phosphorylation. 20 alleles are reported. The phenotypes of these alleles are annotated with: mesothoracic tergum; trichogen cell. It has 6 annotated transcripts and 6 annotated polypeptides. Protein features are: ATP:guanido phosphotransferase; ATP:guanido phosphotransferase active site; ATP:guanido phosphotransferase, N-terminal; ATP:guanido phosphotransferase, catalytic domain; Glutamine synthetase/guanido kinase, catalytic domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of low expression. Peak expression observed at stages throughout the larval period. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult fat body, virgin spermatheca. Comments on Affy2 ProbeSet: ProbeSet 1625633_a_at completely aligns to an exonic region common to each of the 6 FlyBase-annotated transcript isoforms of Argk. Gene sequence location is 3L:9041980..9059127.

User Contributed Data
hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
Argk: Arginine kinase
Structural gene for arginine kinase [ARGK (EC 2.7.3.3)] based on gene dosage studies. Cellular and mitochondrial forms behave as if both are products of the gene. (Munneke and Collier, 1985, Genetics 110: s85). In 108-hour third-instar larvae, activity is high in body-wall and digestive-tract musculature; lower in brain, imaginal discs, and salivary glands; present in head, thorax, and abdomen of adults, being highest in indirect flight muscle of thorax. Activity levels increase during development reaching a peak at the pupal stage; then an abrupt decrease during the pupal stage is followed by a second increase beginning around the time of eclosion and climbing to high adult levels (James and Collier).
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Description
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
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FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
66F3-66F4  
Limits computationally determined from genome sequence between P{PZ}l(3)0162901629&P{PZ}mRpL1210534 and P{EP}Hsp26EP3336&P{EP}Hsp26EP3315  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
66F-66F  
66F-66F  
(determined by in situ hybridisation)  
66B-66F  
Segmental aneuploids (unspecified) produced flies duplicated for region 66B-66F that exhibit elevated Argk activity.  
66B-66B  
Segmental aneuploids (unspecified) identify 66B as the dosage sensitive region for Argk.  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\Argk for information on other features GBrowse View Help
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0076523 FBtr0076546 FBtr0331550 FBtr0076545 FBtr0076544 FBtr0112791 FBtr0076543 FBpp0076250 FBpp0076272 FBpp0303940 FBpp0076273 FBpp0076271 FBpp0076270 FBpp0111703 FBti0115579 FBti0045638 FBti0125581_2 FBti0125581_1 FBti0039072 FBti0143496 FBti0056187 FBti0069848 FBti0099717 FBti0046736 FBti0099716 FBti0050149 FBti0052293
Comments on Gene Model
Gene model reviewed during 5.45
Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters.
Low-frequency RNA-seq exon junction(s) not annotated.
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Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0076543
  2415
  562
FBtr0076544
  2178
  432
FBtr0076546
  2252
  396
FBtr0076545
  1519
  356
FBtr0112791
  1854
  375
FBtr0331550
  2110
  356
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
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Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0076270  
61.3  
562  
7.58  
FBpp0076271  
47.9  
432  
5.90  
FBpp0076273  
43.8  
396  
6.08  
FBpp0076272  
39.9  
356  
6.43  
FBpp0111703  
42.2  
375  
6.26  
FBpp0303940  
39.9  
356  
6.43  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
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DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
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Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
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Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
Comment:maternally deposited
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
hide Polypeptide Expression
No Assay Recorded
Stage
Tissue/Position (including subcellular localization)
Reference
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Argk enzyme activity is present throughout development but there are sharp, transient peaks during the prepupal period and at eclosion. The greatest increase in activity is seen in imaginal discs in the prepupal period. This peak is not seen at the restrictive temperature in the ts-ecdysoneless mutant ecd1 but reappears after larvae are shifted back to a nonrestrictive temperature or fed 20-hydroxyecdysone.
Marker for
Subcellular Localization (GO Cellular Component)
CV term
References
inferred from direct assay
hide Expression Deduced from Reporters
hide High-Throughput Expression Data
Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
hide FlyAtlas Anatomy Microarray

FlyAtlas Anatomical Expression Data

(FlyAtlas-RNA.adult)

(FlyAtlas-RNA.larva)


   Styles
   Scales

Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult fat body, virgin spermatheca.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (>999.999)

Linear, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 2162.775
Larval Midgut
 
 4081.6
Larval Hindgut
 
 4477
Larval Malpighian Tubules
 
 1335.9
Larval Fat Body
 
 159.5
Larval Salivary Gland
 
 1003.8
Larval Trachea
 
 1095.775
Larval Carcass
 
 4969.175
Adult Head
 
 3401.1
Adult Eye
 
 3384.875
Adult Brain
 
 3224.1
Adult Thoracic-Abdominal Ganglion
 
 3847.1
Adult Crop
 
 4926
Adult Midgut
 
 3572.7
Adult Hindgut
 
 4430.3
Adult Malpighian Tubules
 
 1589.2
Adult Fat Body
 
 211.4
Adult Salivary Gland
 
 924.8
Adult Heart
 
 3723.025
Adult VirginFemale Spermatheca
 
 440.7
Adult InseminatedFemale Spermatheca
 
 602.5
Adult Ovary
 
 741.7
Adult Testis
 
 716.6
Adult Male Accessory Gland
 
 852.2
Adult Carcass
 
 4501.1
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (2162.775)
Larval Midgut
 (4081.6)
Larval Hindgut
 (4477)
Larval Malpighian Tubules
 (1335.9)
Larval Fat Body
 
 159.5
Larval Salivary Gland
 (1003.8)
Larval Trachea
 (1095.775)
Larval Carcass
 (4969.175)
Adult Head
 (3401.1)
Adult Eye
 (3384.875)
Adult Brain
 (3224.1)
Adult Thoracic-Abdominal Ganglion
 (3847.1)
Adult Crop
 (4926)
Adult Midgut
 (3572.7)
Adult Hindgut
 (4430.3)
Adult Malpighian Tubules
 (1589.2)
Adult Fat Body
 
 211.4
Adult Salivary Gland
 (924.8)
Adult Heart
 (3723.025)
Adult VirginFemale Spermatheca
 
 440.7
Adult InseminatedFemale Spermatheca
 (602.5)
Adult Ovary
 (741.7)
Adult Testis
 (716.6)
Adult Male Accessory Gland
 (852.2)
Adult Carcass
 (4501.1)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 (2162.775)
Larval Midgut
 (4081.6)
Larval Hindgut
 (4477)
Larval Malpighian Tubules
 (1335.9)
Larval Fat Body
 
 159.5
Larval Salivary Gland
 1003.8
Larval Trachea
 (1095.775)
Larval Carcass
 (4969.175)
Adult Head
 (3401.1)
Adult Eye
 (3384.875)
Adult Brain
 (3224.1)
Adult Thoracic-Abdominal Ganglion
 (3847.1)
Adult Crop
 (4926)
Adult Midgut
 (3572.7)
Adult Hindgut
 (4430.3)
Adult Malpighian Tubules
 (1589.2)
Adult Fat Body
 
 211.4
Adult Salivary Gland
 
 924.8
Adult Heart
 (3723.025)
Adult VirginFemale Spermatheca
 
 440.7
Adult InseminatedFemale Spermatheca
 
 602.5
Adult Ovary
 
 741.7
Adult Testis
 
 716.6
Adult Male Accessory Gland
 
 852.2
Adult Carcass
 (4501.1)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 2162.775
Larval Midgut
 
 4081.6
Larval Hindgut
 
 4477
Larval Malpighian Tubules
 
 1335.9
Larval Fat Body
 
 159.5
Larval Salivary Gland
 
 1003.8
Larval Trachea
 
 1095.775
Larval Carcass
 
 4969.175
Adult Head
 
 3401.1
Adult Eye
 
 3384.875
Adult Brain
 
 3224.1
Adult Thoracic-Abdominal Ganglion
 
 3847.1
Adult Crop
 
 4926
Adult Midgut
 
 3572.7
Adult Hindgut
 
 4430.3
Adult Malpighian Tubules
 
 1589.2
Adult Fat Body
 
 211.4
Adult Salivary Gland
 
 924.8
Adult Heart
 
 3723.025
Adult VirginFemale Spermatheca
 
 440.7
Adult InseminatedFemale Spermatheca
 
 602.5
Adult Ovary
 
 741.7
Adult Testis
 
 716.6
Adult Male Accessory Gland
 
 852.2
Adult Carcass
 
 4501.1
Expression Level Scale
 Very high 
log, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 2162.775
Larval Midgut
 
 4081.6
Larval Hindgut
 
 4477
Larval Malpighian Tubules
 
 1335.9
Larval Fat Body
 
 159.5
Larval Salivary Gland
 
 1003.8
Larval Trachea
 
 1095.775
Larval Carcass
 
 4969.175
Adult Head
 
 3401.1
Adult Eye
 
 3384.875
Adult Brain
 
 3224.1
Adult Thoracic-Abdominal Ganglion
 
 3847.1
Adult Crop
 
 4926
Adult Midgut
 
 3572.7
Adult Hindgut
 
 4430.3
Adult Malpighian Tubules
 
 1589.2
Adult Fat Body
 
 211.4
Adult Salivary Gland
 
 924.8
Adult Heart
 
 3723.025
Adult VirginFemale Spermatheca
 
 440.7
Adult InseminatedFemale Spermatheca
 
 602.5
Adult Ovary
 
 741.7
Adult Testis
 
 716.6
Adult Male Accessory Gland
 
 852.2
Adult Carcass
 
 4501.1
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (2162.775)
Larval Midgut
 (4081.6)
Larval Hindgut
 (4477)
Larval Malpighian Tubules
 (1335.9)
Larval Fat Body
 
 159.5
Larval Salivary Gland
 (1003.8)
Larval Trachea
 (1095.775)
Larval Carcass
 (4969.175)
Adult Head
 (3401.1)
Adult Eye
 (3384.875)
Adult Brain
 (3224.1)
Adult Thoracic-Abdominal Ganglion
 (3847.1)
Adult Crop
 (4926)
Adult Midgut
 (3572.7)
Adult Hindgut
 (4430.3)
Adult Malpighian Tubules
 (1589.2)
Adult Fat Body
 
 211.4
Adult Salivary Gland
 (924.8)
Adult Heart
 (3723.025)
Adult VirginFemale Spermatheca
 
 440.7
Adult InseminatedFemale Spermatheca
 602.5
Adult Ovary
 741.7
Adult Testis
 716.6
Adult Male Accessory Gland
 (852.2)
Adult Carcass
 (4501.1)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 (2162.775)
Larval Midgut
 (4081.6)
Larval Hindgut
 (4477)
Larval Malpighian Tubules
 1335.9
Larval Fat Body
 
 159.5
Larval Salivary Gland
 1003.8
Larval Trachea
 1095.775
Larval Carcass
 (4969.175)
Adult Head
 (3401.1)
Adult Eye
 (3384.875)
Adult Brain
 (3224.1)
Adult Thoracic-Abdominal Ganglion
 (3847.1)
Adult Crop
 (4926)
Adult Midgut
 (3572.7)
Adult Hindgut
 (4430.3)
Adult Malpighian Tubules
 1589.2
Adult Fat Body
 
 211.4
Adult Salivary Gland
 
 924.8
Adult Heart
 (3723.025)
Adult VirginFemale Spermatheca
 
 440.7
Adult InseminatedFemale Spermatheca
 
 602.5
Adult Ovary
 
 741.7
Adult Testis
 
 716.6
Adult Male Accessory Gland
 
 852.2
Adult Carcass
 (4501.1)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 2162.775
Larval Midgut
 
 4081.6
Larval Hindgut
 
 4477
Larval Malpighian Tubules
 
 1335.9
Larval Fat Body
 
 159.5
Larval Salivary Gland
 
 1003.8
Larval Trachea
 
 1095.775
Larval Carcass
 
 4969.175
Adult Head
 
 3401.1
Adult Eye
 
 3384.875
Adult Brain
 
 3224.1
Adult Thoracic-Abdominal Ganglion
 
 3847.1
Adult Crop
 
 4926
Adult Midgut
 
 3572.7
Adult Hindgut
 
 4430.3
Adult Malpighian Tubules
 
 1589.2
Adult Fat Body
 
 211.4
Adult Salivary Gland
 
 924.8
Adult Heart
 
 3723.025
Adult VirginFemale Spermatheca
 
 440.7
Adult InseminatedFemale Spermatheca
 
 602.5
Adult Ovary
 
 741.7
Adult Testis
 
 716.6
Adult Male Accessory Gland
 
 852.2
Adult Carcass
 
 4501.1
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 3401.1
 
NA 
Eye
 
 3384.875
 
NA 
Brain
 
 3224.1
 
2162.775 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 3847.1
 
NA 
Crop
 
 4926
 
4081.6 
Midgut
 
 3572.7
 
4477 
Hindgut
 
 4430.3
 
1335.9 
Malpighian Tubules
 
 1589.2
 
159.5 
Fat Body
 
 211.4
 
1003.8 
Salivary Gland
 
 924.8
 
NA 
Heart
 
 3723.025
 
1095.775 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 440.7
 
NA 
InseminatedFemale Spermatheca
 
 602.5
 
NA 
Ovary
 
 741.7
 
NA 
Testis
 
 716.6
 
NA 
Male Accessory Gland
 
 852.2
 
4969.175 
Carcass
 
 4501.1

FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 183
central nervous system, larvae L3
 
 213
central nervous system, pupae P8
 
 269
head, virgin 1-day female
 
 304
head, virgin 4-day female
 
 239
head, virgin 20-day female
 
 178
head, mated 1-day female
 
 294
head, mated 4-day female
 
 181
head, mated 20-day female
 
 150
head, mated 1-day male
 
 424
head, mated 4-day male
 
 329
head, mated 20-day male
 
 293
salivary gland, larvae L3 wandering
 
 7
salivary gland, white prepupae
 
 10
digestive system, larvae L3 wandering
 
 71
digestive system, 1-day adult
 
 366
digestive system, 4-day adult
 
 290
digestive system, 20-day adult
 
 258
fat body, larvae L3 wandering
 
 4
fat body, white prepupae
 
 30
fat body, pupae P8
 
 164
carcass, larvae L3 wandering
 
 232
carcass, 1-day adult
 
 472
carcass, 4-day adult
 
 298
carcass, 20-day adult
 
 173
ovary, virgin 4-day female
 
 81
ovary, mated 4-day female
 
 87
testis, mated 4-day male
 
 127
accessory gland, mated 4-day male
 
 72
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 (183)
central nervous system, larvae L3
 (213)
central nervous system, pupae P8
 (269)
head, virgin 1-day female
 (304)
head, virgin 4-day female
 (239)
head, virgin 20-day female
 (178)
head, mated 1-day female
 (294)
head, mated 4-day female
 (181)
head, mated 20-day female
 (150)
head, mated 1-day male
 (424)
head, mated 4-day male
 (329)
head, mated 20-day male
 (293)
salivary gland, larvae L3 wandering
 
 7
salivary gland, white prepupae
 
 10
digestive system, larvae L3 wandering
 (71)
digestive system, 1-day adult
 (366)
digestive system, 4-day adult
 (290)
digestive system, 20-day adult
 (258)
fat body, larvae L3 wandering
 
 4
fat body, white prepupae
 (30)
fat body, pupae P8
 (164)
carcass, larvae L3 wandering
 (232)
carcass, 1-day adult
 (472)
carcass, 4-day adult
 (298)
carcass, 20-day adult
 (173)
ovary, virgin 4-day female
 (81)
ovary, mated 4-day female
 (87)
testis, mated 4-day male
 (127)
accessory gland, mated 4-day male
 (72)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 (183)
central nervous system, larvae L3
 (213)
central nervous system, pupae P8
 (269)
head, virgin 1-day female
 (304)
head, virgin 4-day female
 (239)
head, virgin 20-day female
 (178)
head, mated 1-day female
 (294)
head, mated 4-day female
 (181)
head, mated 20-day female
 (150)
head, mated 1-day male
 (424)
head, mated 4-day male
 (329)
head, mated 20-day male
 (293)
salivary gland, larvae L3 wandering
 
 7
salivary gland, white prepupae
 
 10
digestive system, larvae L3 wandering
 
 71
digestive system, 1-day adult
 (366)
digestive system, 4-day adult
 (290)
digestive system, 20-day adult
 (258)
fat body, larvae L3 wandering
 
 4
fat body, white prepupae
 
 30
fat body, pupae P8
 (164)
carcass, larvae L3 wandering
 (232)
carcass, 1-day adult
 (472)
carcass, 4-day adult
 (298)
carcass, 20-day adult
 (173)
ovary, virgin 4-day female
 
 81
ovary, mated 4-day female
 
 87
testis, mated 4-day male
 (127)
accessory gland, mated 4-day male
 
 72
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 183
central nervous system, larvae L3
 
 213
central nervous system, pupae P8
 
 269
head, virgin 1-day female
 
 304
head, virgin 4-day female
 
 239
head, virgin 20-day female
 
 178
head, mated 1-day female
 
 294
head, mated 4-day female
 
 181
head, mated 20-day female
 
 150
head, mated 1-day male
 
 424
head, mated 4-day male
 
 329
head, mated 20-day male
 
 293
salivary gland, larvae L3 wandering
 
 7
salivary gland, white prepupae
 
 10
digestive system, larvae L3 wandering
 
 71
digestive system, 1-day adult
 
 366
digestive system, 4-day adult
 
 290
digestive system, 20-day adult
 
 258
fat body, larvae L3 wandering
 
 4
fat body, white prepupae
 
 30
fat body, pupae P8
 
 164
carcass, larvae L3 wandering
 
 232
carcass, 1-day adult
 
 472
carcass, 4-day adult
 
 298
carcass, 20-day adult
 
 173
ovary, virgin 4-day female
 
 81
ovary, mated 4-day female
 
 87
testis, mated 4-day male
 
 127
accessory gland, mated 4-day male
 
 72
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 183
central nervous system, larvae L3
 
 213
central nervous system, pupae P8
 
 269
head, virgin 1-day female
 
 304
head, virgin 4-day female
 
 239
head, virgin 20-day female
 
 178
head, mated 1-day female
 
 294
head, mated 4-day female
 
 181
head, mated 20-day female
 
 150
head, mated 1-day male
 
 424
head, mated 4-day male
 
 329
head, mated 20-day male
 
 293
salivary gland, larvae L3 wandering
 
 7
salivary gland, white prepupae
 
 10
digestive system, larvae L3 wandering
 
 71
digestive system, 1-day adult
 
 366
digestive system, 4-day adult
 
 290
digestive system, 20-day adult
 
 258
fat body, larvae L3 wandering
 
 4
fat body, white prepupae
 
 30
fat body, pupae P8
 
 164
carcass, larvae L3 wandering
 
 232
carcass, 1-day adult
 
 472
carcass, 4-day adult
 
 298
carcass, 20-day adult
 
 173
ovary, virgin 4-day female
 
 81
ovary, mated 4-day female
 
 87
testis, mated 4-day male
 
 127
accessory gland, mated 4-day male
 
 72
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 (183)
central nervous system, larvae L3
 (213)
central nervous system, pupae P8
 (269)
head, virgin 1-day female
 (304)
head, virgin 4-day female
 (239)
head, virgin 20-day female
 (178)
head, mated 1-day female
 (294)
head, mated 4-day female
 (181)
head, mated 20-day female
 (150)
head, mated 1-day male
 (424)
head, mated 4-day male
 (329)
head, mated 20-day male
 (293)
salivary gland, larvae L3 wandering
 
 7
salivary gland, white prepupae
 
 10
digestive system, larvae L3 wandering
 (71)
digestive system, 1-day adult
 (366)
digestive system, 4-day adult
 (290)
digestive system, 20-day adult
 (258)
fat body, larvae L3 wandering
 
 4
fat body, white prepupae
 30
fat body, pupae P8
 (164)
carcass, larvae L3 wandering
 (232)
carcass, 1-day adult
 (472)
carcass, 4-day adult
 (298)
carcass, 20-day adult
 (173)
ovary, virgin 4-day female
 (81)
ovary, mated 4-day female
 (87)
testis, mated 4-day male
 (127)
accessory gland, mated 4-day male
 (72)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 (183)
central nervous system, larvae L3
 (213)
central nervous system, pupae P8
 (269)
head, virgin 1-day female
 (304)
head, virgin 4-day female
 (239)
head, virgin 20-day female
 (178)
head, mated 1-day female
 (294)
head, mated 4-day female
 (181)
head, mated 20-day female
 (150)
head, mated 1-day male
 (424)
head, mated 4-day male
 (329)
head, mated 20-day male
 (293)
salivary gland, larvae L3 wandering
 
 7
salivary gland, white prepupae
 
 10
digestive system, larvae L3 wandering
 
 71
digestive system, 1-day adult
 (366)
digestive system, 4-day adult
 (290)
digestive system, 20-day adult
 (258)
fat body, larvae L3 wandering
 
 4
fat body, white prepupae
 
 30
fat body, pupae P8
 (164)
carcass, larvae L3 wandering
 (232)
carcass, 1-day adult
 (472)
carcass, 4-day adult
 (298)
carcass, 20-day adult
 (173)
ovary, virgin 4-day female
 
 81
ovary, mated 4-day female
 
 87
testis, mated 4-day male
 127
accessory gland, mated 4-day male
 
 72
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 183
central nervous system, larvae L3
 
 213
central nervous system, pupae P8
 
 269
head, virgin 1-day female
 
 304
head, virgin 4-day female
 
 239
head, virgin 20-day female
 
 178
head, mated 1-day female
 
 294
head, mated 4-day female
 
 181
head, mated 20-day female
 
 150
head, mated 1-day male
 
 424
head, mated 4-day male
 
 329
head, mated 20-day male
 
 293
salivary gland, larvae L3 wandering
 
 7
salivary gland, white prepupae
 
 10
digestive system, larvae L3 wandering
 
 71
digestive system, 1-day adult
 
 366
digestive system, 4-day adult
 
 290
digestive system, 20-day adult
 
 258
fat body, larvae L3 wandering
 
 4
fat body, white prepupae
 
 30
fat body, pupae P8
 
 164
carcass, larvae L3 wandering
 
 232
carcass, 1-day adult
 
 472
carcass, 4-day adult
 
 298
carcass, 20-day adult
 
 173
ovary, virgin 4-day female
 
 81
ovary, mated 4-day female
 
 87
testis, mated 4-day male
 
 127
accessory gland, mated 4-day male
 
 72
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 
central nervous system, larvae L3
 
 
central nervous system, pupae P8
 
 
head, virgin 1-day female
 
 
head, virgin 4-day female
 
 
head, virgin 20-day female
 
 
head, mated 1-day female
 
 
head, mated 4-day female
 
 
head, mated 20-day female
 
 
head, mated 1-day male
 
 
head, mated 4-day male
 
 
head, mated 20-day male
 
 
salivary gland, larvae L3 wandering
 
 
salivary gland, white prepupae
 
 
digestive system, larvae L3 wandering
 
 
digestive system, 1-day adult
 
 
digestive system, 4-day adult
 
 
digestive system, 20-day adult
 
 
fat body, larvae L3 wandering
 
 
fat body, white prepupae
 
 
fat body, pupae P8
 
 
carcass, larvae L3 wandering
 
 
carcass, 1-day adult
 
 
carcass, 4-day adult
 
 
carcass, 20-day adult
 
 
ovary, virgin 4-day female
 
 
ovary, mated 4-day female
 
 
testis, mated 4-day male
 
 
accessory gland, mated 4-day male
 
 

hide modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)


   Styles
   Scales

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of low expression. Peak expression observed at stages throughout the larval period.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 103
embryo 02-04hr
 
 5
embryo 04-06hr
 
 4
embryo 06-08hr
 
 45
embryo 08-10hr
 
 114
embryo 10-12hr
 
 378
embryo 12-14hr
 
 242
embryo 14-16hr
 
 281
embryo 16-18hr
 
 162
embryo 18-20hr
 
 136
embryo 20-22hr
 
 228
embryo 22-24hr
 
 198
larva L1
 
 755
larva L2
 
 853
larva L3 12hr old
 
 1581
larva L3 puffstage 1-2
 
 1423
larva L3 puffstage 3-6
 
 786
larva L3 puffstage 7-9
 
 252
white prepupae new
 
 131
white prepupae 12hr
 
 232
white prepupae 24hr
 
 343
pupae 2d postWPP
 
 592
pupae 3d postWPP
 
 652
pupae 4d postWPP
 
 302
adult male 01day
 
 697
adult male 05day
 
 846
adult male 30day
 
 472
adult female 01day
 
 484
adult female 05day
 
 200
adult female 30day
 
 169
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (103)
embryo 02-04hr
 
 5
embryo 04-06hr
 
 4
embryo 06-08hr
 (45)
embryo 08-10hr
 (114)
embryo 10-12hr
 (378)
embryo 12-14hr
 (242)
embryo 14-16hr
 (281)
embryo 16-18hr
 (162)
embryo 18-20hr
 (136)
embryo 20-22hr
 (228)
embryo 22-24hr
 (198)
larva L1
 (755)
larva L2
 (853)
larva L3 12hr old
 (1581)
larva L3 puffstage 1-2
 (1423)
larva L3 puffstage 3-6
 (786)
larva L3 puffstage 7-9
 (252)
white prepupae new
 (131)
white prepupae 12hr
 (232)
white prepupae 24hr
 (343)
pupae 2d postWPP
 (592)
pupae 3d postWPP
 (652)
pupae 4d postWPP
 (302)
adult male 01day
 (697)
adult male 05day
 (846)
adult male 30day
 (472)
adult female 01day
 (484)
adult female 05day
 (200)
adult female 30day
 (169)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 103
embryo 02-04hr
 
 5
embryo 04-06hr
 
 4
embryo 06-08hr
 
 45
embryo 08-10hr
 (114)
embryo 10-12hr
 (378)
embryo 12-14hr
 (242)
embryo 14-16hr
 (281)
embryo 16-18hr
 (162)
embryo 18-20hr
 (136)
embryo 20-22hr
 (228)
embryo 22-24hr
 (198)
larva L1
 (755)
larva L2
 (853)
larva L3 12hr old
 (1581)
larva L3 puffstage 1-2
 (1423)
larva L3 puffstage 3-6
 (786)
larva L3 puffstage 7-9
 (252)
white prepupae new
 (131)
white prepupae 12hr
 (232)
white prepupae 24hr
 (343)
pupae 2d postWPP
 (592)
pupae 3d postWPP
 (652)
pupae 4d postWPP
 (302)
adult male 01day
 (697)
adult male 05day
 (846)
adult male 30day
 (472)
adult female 01day
 (484)
adult female 05day
 (200)
adult female 30day
 (169)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 103
embryo 02-04hr
 
 5
embryo 04-06hr
 
 4
embryo 06-08hr
 
 45
embryo 08-10hr
 
 114
embryo 10-12hr
 
 378
embryo 12-14hr
 
 242
embryo 14-16hr
 
 281
embryo 16-18hr
 
 162
embryo 18-20hr
 
 136
embryo 20-22hr
 
 228
embryo 22-24hr
 
 198
larva L1
 
 755
larva L2
 
 853
larva L3 12hr old
 
 1581
larva L3 puffstage 1-2
 
 1423
larva L3 puffstage 3-6
 
 786
larva L3 puffstage 7-9
 
 252
white prepupae new
 
 131
white prepupae 12hr
 
 232
white prepupae 24hr
 
 343
pupae 2d postWPP
 
 592
pupae 3d postWPP
 
 652
pupae 4d postWPP
 
 302
adult male 01day
 
 697
adult male 05day
 
 846
adult male 30day
 
 472
adult female 01day
 
 484
adult female 05day
 
 200
adult female 30day
 
 169
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 103
embryo 02-04hr
 
 5
embryo 04-06hr
 
 4
embryo 06-08hr
 
 45
embryo 08-10hr
 
 114
embryo 10-12hr
 
 378
embryo 12-14hr
 
 242
embryo 14-16hr
 
 281
embryo 16-18hr
 
 162
embryo 18-20hr
 
 136
embryo 20-22hr
 
 228
embryo 22-24hr
 
 198
larva L1
 
 755
larva L2
 
 853
larva L3 12hr old
 
 1581
larva L3 puffstage 1-2
 
 1423
larva L3 puffstage 3-6
 
 786
larva L3 puffstage 7-9
 
 252
white prepupae new
 
 131
white prepupae 12hr
 
 232
white prepupae 24hr
 
 343
pupae 2d postWPP
 
 592
pupae 3d postWPP
 
 652
pupae 4d postWPP
 
 302
adult male 01day
 
 697
adult male 05day
 
 846
adult male 30day
 
 472
adult female 01day
 
 484
adult female 05day
 
 200
adult female 30day
 
 169
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (103)
embryo 02-04hr
 
 5
embryo 04-06hr
 
 4
embryo 06-08hr
 (45)
embryo 08-10hr
 (114)
embryo 10-12hr
 (378)
embryo 12-14hr
 (242)
embryo 14-16hr
 (281)
embryo 16-18hr
 (162)
embryo 18-20hr
 (136)
embryo 20-22hr
 (228)
embryo 22-24hr
 (198)
larva L1
 (755)
larva L2
 (853)
larva L3 12hr old
 (1581)
larva L3 puffstage 1-2
 (1423)
larva L3 puffstage 3-6
 (786)
larva L3 puffstage 7-9
 (252)
white prepupae new
 (131)
white prepupae 12hr
 (232)
white prepupae 24hr
 (343)
pupae 2d postWPP
 (592)
pupae 3d postWPP
 (652)
pupae 4d postWPP
 (302)
adult male 01day
 (697)
adult male 05day
 (846)
adult male 30day
 (472)
adult female 01day
 (484)
adult female 05day
 (200)
adult female 30day
 (169)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 103
embryo 02-04hr
 
 5
embryo 04-06hr
 
 4
embryo 06-08hr
 
 45
embryo 08-10hr
 114
embryo 10-12hr
 (378)
embryo 12-14hr
 (242)
embryo 14-16hr
 (281)
embryo 16-18hr
 (162)
embryo 18-20hr
 136
embryo 20-22hr
 (228)
embryo 22-24hr
 (198)
larva L1
 (755)
larva L2
 (853)
larva L3 12hr old
 (1581)
larva L3 puffstage 1-2
 (1423)
larva L3 puffstage 3-6
 (786)
larva L3 puffstage 7-9
 (252)
white prepupae new
 131
white prepupae 12hr
 (232)
white prepupae 24hr
 (343)
pupae 2d postWPP
 (592)
pupae 3d postWPP
 (652)
pupae 4d postWPP
 (302)
adult male 01day
 (697)
adult male 05day
 (846)
adult male 30day
 (472)
adult female 01day
 (484)
adult female 05day
 (200)
adult female 30day
 (169)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 103
embryo 02-04hr
 
 5
embryo 04-06hr
 
 4
embryo 06-08hr
 
 45
embryo 08-10hr
 
 114
embryo 10-12hr
 
 378
embryo 12-14hr
 
 242
embryo 14-16hr
 
 281
embryo 16-18hr
 
 162
embryo 18-20hr
 
 136
embryo 20-22hr
 
 228
embryo 22-24hr
 
 198
larva L1
 
 755
larva L2
 
 853
larva L3 12hr old
 
 1581
larva L3 puffstage 1-2
 
 1423
larva L3 puffstage 3-6
 
 786
larva L3 puffstage 7-9
 
 252
white prepupae new
 
 131
white prepupae 12hr
 
 232
white prepupae 24hr
 
 343
pupae 2d postWPP
 
 592
pupae 3d postWPP
 
 652
pupae 4d postWPP
 
 302
adult male 01day
 
 697
adult male 05day
 
 846
adult male 30day
 
 472
adult female 01day
 
 484
adult female 05day
 
 200
adult female 30day
 
 169
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

modENCODE Temporal Expression Data (Graveley et al., 2011)
hide modENCODE Cell Lines RNA-Seq

modENCODE Cell Line Expression Data

(modENCODE_mRNA-Seq_cell.A)

(modENCODE_mRNA-Seq_cell.B)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 14
Schneider line 2 Sg4
 
 268
embryonic 1182-4H
 
 1
embryonic GM2
 
 1
embryonic Kc167
 
 7
embryonic S1
 
 1
embryonic S3
 
 0
leg disc CME L1
 
 340
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 2
wing disc ML-DmD9
 
 3
wing disc ML-DmD16-c3
 
 3
wing disc ML-DmD21
 
 142
wing disc ML-DmD32
 
 1
haltere disc ML-DmD17-c3
 
 1
eye-antennal disc ML-DmD11
 
 2
antennal disc ML-DmD20-c5
 
 6
mixed discs ML-DmD4-c1
 
 2
CNS ML-DmBG1-c1
 
 60
CNS ML-DmBG2-c2
 
 5
tumorous blood cells mbn2
 
 52
ovary fGS/OSS
 
 165
ovary OSC
 
 36
ovary OSS
 
 18
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 14
Schneider line 2 Sg4
 (268)
embryonic 1182-4H
 
 1
embryonic GM2
 
 1
embryonic Kc167
 
 7
embryonic S1
 
 1
embryonic S3
 
 0
leg disc CME L1
 (340)
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 2
wing disc ML-DmD9
 
 3
wing disc ML-DmD16-c3
 
 3
wing disc ML-DmD21
 (142)
wing disc ML-DmD32
 
 1
haltere disc ML-DmD17-c3
 
 1
eye-antennal disc ML-DmD11
 
 2
antennal disc ML-DmD20-c5
 
 6
mixed discs ML-DmD4-c1
 
 2
CNS ML-DmBG1-c1
 (60)
CNS ML-DmBG2-c2
 
 5
tumorous blood cells mbn2
 (52)
ovary fGS/OSS
 (165)
ovary OSC
 (36)
ovary OSS
 
 18
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 14
Schneider line 2 Sg4
 (268)
embryonic 1182-4H
 
 1
embryonic GM2
 
 1
embryonic Kc167
 
 7
embryonic S1
 
 1
embryonic S3
 
 0
leg disc CME L1
 (340)
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 2
wing disc ML-DmD9
 
 3
wing disc ML-DmD16-c3
 
 3
wing disc ML-DmD21
 (142)
wing disc ML-DmD32
 
 1
haltere disc ML-DmD17-c3
 
 1
eye-antennal disc ML-DmD11
 
 2
antennal disc ML-DmD20-c5
 
 6
mixed discs ML-DmD4-c1
 
 2
CNS ML-DmBG1-c1
 
 60
CNS ML-DmBG2-c2
 
 5
tumorous blood cells mbn2
 
 52
ovary fGS/OSS
 (165)
ovary OSC
 
 36
ovary OSS
 
 18
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 14
Schneider line 2 Sg4
 
 268
embryonic 1182-4H
 
 1
embryonic GM2
 
 1
embryonic Kc167
 
 7
embryonic S1
 
 1
embryonic S3
 
 0
leg disc CME L1
 
 340
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 2
wing disc ML-DmD9
 
 3
wing disc ML-DmD16-c3
 
 3
wing disc ML-DmD21
 
 142
wing disc ML-DmD32
 
 1
haltere disc ML-DmD17-c3
 
 1
eye-antennal disc ML-DmD11
 
 2
antennal disc ML-DmD20-c5
 
 6
mixed discs ML-DmD4-c1
 
 2
CNS ML-DmBG1-c1
 
 60
CNS ML-DmBG2-c2
 
 5
tumorous blood cells mbn2
 
 52
ovary fGS/OSS
 
 165
ovary OSC
 
 36
ovary OSS
 
 18
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 14
Schneider line 2 Sg4
 
 268
embryonic 1182-4H
 
 1
embryonic GM2
 
 1
embryonic Kc167
 
 7
embryonic S1
 
 1
embryonic S3
 
 0
leg disc CME L1
 
 340
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 2
wing disc ML-DmD9
 
 3
wing disc ML-DmD16-c3
 
 3
wing disc ML-DmD21
 
 142
wing disc ML-DmD32
 
 1
haltere disc ML-DmD17-c3
 
 1
eye-antennal disc ML-DmD11
 
 2
antennal disc ML-DmD20-c5
 
 6
mixed discs ML-DmD4-c1
 
 2
CNS ML-DmBG1-c1
 
 60
CNS ML-DmBG2-c2
 
 5
tumorous blood cells mbn2
 
 52
ovary fGS/OSS
 
 165
ovary OSC
 
 36
ovary OSS
 
 18
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 14
Schneider line 2 Sg4
 (268)
embryonic 1182-4H
 
 1
embryonic GM2
 
 1
embryonic Kc167
 
 7
embryonic S1
 
 1
embryonic S3
 
 0
leg disc CME L1
 (340)
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 2
wing disc ML-DmD9
 
 3
wing disc ML-DmD16-c3
 
 3
wing disc ML-DmD21
 (142)
wing disc ML-DmD32
 
 1
haltere disc ML-DmD17-c3
 
 1
eye-antennal disc ML-DmD11
 
 2
antennal disc ML-DmD20-c5
 
 6
mixed discs ML-DmD4-c1
 
 2
CNS ML-DmBG1-c1
 (60)
CNS ML-DmBG2-c2
 
 5
tumorous blood cells mbn2
 (52)
ovary fGS/OSS
 (165)
ovary OSC
 (36)
ovary OSS
 
 18
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 14
Schneider line 2 Sg4
 (268)
embryonic 1182-4H
 
 1
embryonic GM2
 
 1
embryonic Kc167
 
 7
embryonic S1
 
 1
embryonic S3
 
 0
leg disc CME L1
 (340)
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 2
wing disc ML-DmD9
 
 3
wing disc ML-DmD16-c3
 
 3
wing disc ML-DmD21
 142
wing disc ML-DmD32
 
 1
haltere disc ML-DmD17-c3
 
 1
eye-antennal disc ML-DmD11
 
 2
antennal disc ML-DmD20-c5
 
 6
mixed discs ML-DmD4-c1
 
 2
CNS ML-DmBG1-c1
 
 60
CNS ML-DmBG2-c2
 
 5
tumorous blood cells mbn2
 
 52
ovary fGS/OSS
 (165)
ovary OSC
 
 36
ovary OSS
 
 18
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 14
Schneider line 2 Sg4
 
 268
embryonic 1182-4H
 
 1
embryonic GM2
 
 1
embryonic Kc167
 
 7
embryonic S1
 
 1
embryonic S3
 
 0
leg disc CME L1
 
 340
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 2
wing disc ML-DmD9
 
 3
wing disc ML-DmD16-c3
 
 3
wing disc ML-DmD21
 
 142
wing disc ML-DmD32
 
 1
haltere disc ML-DmD17-c3
 
 1
eye-antennal disc ML-DmD11
 
 2
antennal disc ML-DmD20-c5
 
 6
mixed discs ML-DmD4-c1
 
 2
CNS ML-DmBG1-c1
 
 60
CNS ML-DmBG2-c2
 
 5
tumorous blood cells mbn2
 
 52
ovary fGS/OSS
 
 165
ovary OSC
 
 36
ovary OSS
 
 18
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Cell Line   Expression Level
Schneider line 2 S2R+
 
 
Schneider line 2 Sg4
 
 
embryonic 1182-4H
 
 
embryonic GM2
 
 
embryonic Kc167
 
 
embryonic S1
 
 
embryonic S3
 
 
leg disc CME L1
 
 
wing disc CME-W2
 
 
wing disc ML-DmD8
 
 
wing disc ML-DmD9
 
 
wing disc ML-DmD16-c3
 
 
wing disc ML-DmD21
 
 
wing disc ML-DmD32
 
 
haltere disc ML-DmD17-c3
 
 
eye-antennal disc ML-DmD11
 
 
antennal disc ML-DmD20-c5
 
 
mixed discs ML-DmD4-c1
 
 
CNS ML-DmBG1-c1
 
 
CNS ML-DmBG2-c2
 
 
tumorous blood cells mbn2
 
 
ovary fGS/OSS
 
 
ovary OSC
 
 
ovary OSS
 
 

hide modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 106
cold shock, 4-day adult
 
 81
heat shock, 4-day adult
 
 778
Cadmium 50 mM 6 hrs, larvae L3
 
 1325
Cadmium 50 mM 12 hrs, larvae L3
 
 694
Cadmium 50 mM 48 hrs, 4-day adult
 
 839
Cadmium 100 mM 48 hrs, 4-day adult
 
 94
Copper 0.5 mM 12 hrs, larvae L3
 
 865
Copper 15 mM 48 hrs, 4-day adult
 
 95
Zinc 5 mM 12 hrs, larvae L3
 
 523
Zinc 4.5 mM 48 hrs, 4-day adult
 
 137
Ethanol 2.5% 3 hrs, larvae L3
 
 178
Ethanol 5% 3 hrs, larvae L3
 
 882
Ethanol 10% 3 hrs, larvae L3
 
 1205
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 831
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 92
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 140
Paraquat 5 mM 48 hrs, 4-day adult
 
 215
Paraquat 10 mM 48 hrs, 4-day adult
 
 206
Rotenone 2 μg 12 hrs, larvae L3
 
 932
Rotenone 8 μg 12 hrs, larvae L3
 
 1184
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Linear, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 (106)
cold shock, 4-day adult
 (81)
heat shock, 4-day adult
 (778)
Cadmium 50 mM 6 hrs, larvae L3
 (1325)
Cadmium 50 mM 12 hrs, larvae L3
 (694)
Cadmium 50 mM 48 hrs, 4-day adult
 (839)
Cadmium 100 mM 48 hrs, 4-day adult
 (94)
Copper 0.5 mM 12 hrs, larvae L3
 (865)
Copper 15 mM 48 hrs, 4-day adult
 (95)
Zinc 5 mM 12 hrs, larvae L3
 (523)
Zinc 4.5 mM 48 hrs, 4-day adult
 (137)
Ethanol 2.5% 3 hrs, larvae L3
 (178)
Ethanol 5% 3 hrs, larvae L3
 (882)
Ethanol 10% 3 hrs, larvae L3
 (1205)
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 (831)
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 (92)
Caffeine 25 mg/ml 48 hrs, 4-day adult
 (140)
Paraquat 5 mM 48 hrs, 4-day adult
 (215)
Paraquat 10 mM 48 hrs, 4-day adult
 (206)
Rotenone 2 μg 12 hrs, larvae L3
 (932)
Rotenone 8 μg 12 hrs, larvae L3
 (1184)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 106
cold shock, 4-day adult
 
 81
heat shock, 4-day adult
 (778)
Cadmium 50 mM 6 hrs, larvae L3
 (1325)
Cadmium 50 mM 12 hrs, larvae L3
 (694)
Cadmium 50 mM 48 hrs, 4-day adult
 (839)
Cadmium 100 mM 48 hrs, 4-day adult
 
 94
Copper 0.5 mM 12 hrs, larvae L3
 (865)
Copper 15 mM 48 hrs, 4-day adult
 
 95
Zinc 5 mM 12 hrs, larvae L3
 (523)
Zinc 4.5 mM 48 hrs, 4-day adult
 (137)
Ethanol 2.5% 3 hrs, larvae L3
 (178)
Ethanol 5% 3 hrs, larvae L3
 (882)
Ethanol 10% 3 hrs, larvae L3
 (1205)
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 (831)
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 92
Caffeine 25 mg/ml 48 hrs, 4-day adult
 (140)
Paraquat 5 mM 48 hrs, 4-day adult
 (215)
Paraquat 10 mM 48 hrs, 4-day adult
 (206)
Rotenone 2 μg 12 hrs, larvae L3
 (932)
Rotenone 8 μg 12 hrs, larvae L3
 (1184)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 106
cold shock, 4-day adult
 
 81
heat shock, 4-day adult
 
 778
Cadmium 50 mM 6 hrs, larvae L3
 
 1325
Cadmium 50 mM 12 hrs, larvae L3
 
 694
Cadmium 50 mM 48 hrs, 4-day adult
 
 839
Cadmium 100 mM 48 hrs, 4-day adult
 
 94
Copper 0.5 mM 12 hrs, larvae L3
 
 865
Copper 15 mM 48 hrs, 4-day adult
 
 95
Zinc 5 mM 12 hrs, larvae L3
 
 523
Zinc 4.5 mM 48 hrs, 4-day adult
 
 137
Ethanol 2.5% 3 hrs, larvae L3
 
 178
Ethanol 5% 3 hrs, larvae L3
 
 882
Ethanol 10% 3 hrs, larvae L3
 
 1205
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 831
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 92
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 140
Paraquat 5 mM 48 hrs, 4-day adult
 
 215
Paraquat 10 mM 48 hrs, 4-day adult
 
 206
Rotenone 2 μg 12 hrs, larvae L3
 
 932
Rotenone 8 μg 12 hrs, larvae L3
 
 1184
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 106
cold shock, 4-day adult
 
 81
heat shock, 4-day adult
 
 778
Cadmium 50 mM 6 hrs, larvae L3
 
 1325
Cadmium 50 mM 12 hrs, larvae L3
 
 694
Cadmium 50 mM 48 hrs, 4-day adult
 
 839
Cadmium 100 mM 48 hrs, 4-day adult
 
 94
Copper 0.5 mM 12 hrs, larvae L3
 
 865
Copper 15 mM 48 hrs, 4-day adult
 
 95
Zinc 5 mM 12 hrs, larvae L3
 
 523
Zinc 4.5 mM 48 hrs, 4-day adult
 
 137
Ethanol 2.5% 3 hrs, larvae L3
 
 178
Ethanol 5% 3 hrs, larvae L3
 
 882
Ethanol 10% 3 hrs, larvae L3
 
 1205
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 831
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 92
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 140
Paraquat 5 mM 48 hrs, 4-day adult
 
 215
Paraquat 10 mM 48 hrs, 4-day adult
 
 206
Rotenone 2 μg 12 hrs, larvae L3
 
 932
Rotenone 8 μg 12 hrs, larvae L3
 
 1184
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 (106)
cold shock, 4-day adult
 (81)
heat shock, 4-day adult
 (778)
Cadmium 50 mM 6 hrs, larvae L3
 (1325)
Cadmium 50 mM 12 hrs, larvae L3
 (694)
Cadmium 50 mM 48 hrs, 4-day adult
 (839)
Cadmium 100 mM 48 hrs, 4-day adult
 (94)
Copper 0.5 mM 12 hrs, larvae L3
 (865)
Copper 15 mM 48 hrs, 4-day adult
 (95)
Zinc 5 mM 12 hrs, larvae L3
 (523)
Zinc 4.5 mM 48 hrs, 4-day adult
 (137)
Ethanol 2.5% 3 hrs, larvae L3
 (178)
Ethanol 5% 3 hrs, larvae L3
 (882)
Ethanol 10% 3 hrs, larvae L3
 (1205)
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 (831)
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 (92)
Caffeine 25 mg/ml 48 hrs, 4-day adult
 (140)
Paraquat 5 mM 48 hrs, 4-day adult
 (215)
Paraquat 10 mM 48 hrs, 4-day adult
 (206)
Rotenone 2 μg 12 hrs, larvae L3
 (932)
Rotenone 8 μg 12 hrs, larvae L3
 (1184)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 106
cold shock, 4-day adult
 
 81
heat shock, 4-day adult
 (778)
Cadmium 50 mM 6 hrs, larvae L3
 (1325)
Cadmium 50 mM 12 hrs, larvae L3
 (694)
Cadmium 50 mM 48 hrs, 4-day adult
 (839)
Cadmium 100 mM 48 hrs, 4-day adult
 
 94
Copper 0.5 mM 12 hrs, larvae L3
 (865)
Copper 15 mM 48 hrs, 4-day adult
 
 95
Zinc 5 mM 12 hrs, larvae L3
 (523)
Zinc 4.5 mM 48 hrs, 4-day adult
 137
Ethanol 2.5% 3 hrs, larvae L3
 (178)
Ethanol 5% 3 hrs, larvae L3
 (882)
Ethanol 10% 3 hrs, larvae L3
 (1205)
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 (831)
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 92
Caffeine 25 mg/ml 48 hrs, 4-day adult
 140
Paraquat 5 mM 48 hrs, 4-day adult
 (215)
Paraquat 10 mM 48 hrs, 4-day adult
 (206)
Rotenone 2 μg 12 hrs, larvae L3
 (932)
Rotenone 8 μg 12 hrs, larvae L3
 (1184)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 106
cold shock, 4-day adult
 
 81
heat shock, 4-day adult
 
 778
Cadmium 50 mM 6 hrs, larvae L3
 
 1325
Cadmium 50 mM 12 hrs, larvae L3
 
 694
Cadmium 50 mM 48 hrs, 4-day adult
 
 839
Cadmium 100 mM 48 hrs, 4-day adult
 
 94
Copper 0.5 mM 12 hrs, larvae L3
 
 865
Copper 15 mM 48 hrs, 4-day adult
 
 95
Zinc 5 mM 12 hrs, larvae L3
 
 523
Zinc 4.5 mM 48 hrs, 4-day adult
 
 137
Ethanol 2.5% 3 hrs, larvae L3
 
 178
Ethanol 5% 3 hrs, larvae L3
 
 882
Ethanol 10% 3 hrs, larvae L3
 
 1205
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 831
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 92
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 140
Paraquat 5 mM 48 hrs, 4-day adult
 
 215
Paraquat 10 mM 48 hrs, 4-day adult
 
 206
Rotenone 2 μg 12 hrs, larvae L3
 
 932
Rotenone 8 μg 12 hrs, larvae L3
 
 1184
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Treatment   Expression Level
extended cold, 4-day adult
 
 
cold shock, 4-day adult
 
 
heat shock, 4-day adult
 
 
Cadmium 50 mM 6 hrs, larvae L3
 
 
Cadmium 50 mM 12 hrs, larvae L3
 
 
Cadmium 50 mM 48 hrs, 4-day adult
 
 
Cadmium 100 mM 48 hrs, 4-day adult
 
 
Copper 0.5 mM 12 hrs, larvae L3
 
 
Copper 15 mM 48 hrs, 4-day adult
 
 
Zinc 5 mM 12 hrs, larvae L3
 
 
Zinc 4.5 mM 48 hrs, 4-day adult
 
 
Ethanol 2.5% 3 hrs, larvae L3
 
 
Ethanol 5% 3 hrs, larvae L3
 
 
Ethanol 10% 3 hrs, larvae L3
 
 
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 
Paraquat 5 mM 48 hrs, 4-day adult
 
 
Paraquat 10 mM 48 hrs, 4-day adult
 
 
Rotenone 2 μg 12 hrs, larvae L3
 
 
Rotenone 8 μg 12 hrs, larvae L3
 
 

hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 16 )
For All Classical Alleles Show

Allele of ArgkClassMutagenStocksKnown lesion
Argkc059791 --
Argkd066151 --
Argke009081 --
Argkf01693
1 --
Argkf052551 --
ArgkKG100201 --
ArgkPL004181 --
ArgkA0 --
ArgkB0 --
ArgkCB037890 Yes
ArgkCB054920 Yes
ArgkCPTI0042990 Yes
Argkd078470 --
ArgkEP584MR20 Yes
Argkl10 Yes
ArgkMB0 Yes
hide Alleles Carried on Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show

Allele of ArgkClassMutagenStocksKnown lesion
ArgkGD104362 Yes
ArgkGL001021 Yes
ArgkHMS022621 Yes
ArgkJF026991 Yes
hide Aneuploid Aberrations
Disrupted in
Duplicated in
Not disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
insertion of mobile activating element
insertion of enhancer trap binary system
hide Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
hide Terms Based on Experimental Evidence ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term
References
inferred from direct assay
hide Terms Based on Predictions or Assertions ( 2 terms )
Molecular Function
CV term
References
inferred from sequence or structural similarity with UniProtKB:P91798
non-traceable author statement
Biological Process
CV term
References
inferred from sequence or structural similarity with UniProtKB:P91798
Cellular Component ( 0 terms)
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
protein-protein
Interacting group
Assay
References
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based, anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
experimental knowledge based, anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
experimental knowledge based, anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
Argk allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
hide OrthoDB Orthologs (69) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
Insect inclusive ortholog search
Arthropod inclusive ortholog search
Metazoa inclusive ortholog search
hideOrthologs in Drosophila Species (EOG66Q7CD)
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly 
 
 
Drosophila sechellia
 
Y
 
Drosophila erecta
 
Y
 
Drosophila yakuba
 
Y
 
Drosophila ananassae
 
Y
 
Drosophila pseudoobscura pseudoobscura
 
Y
 
Drosophila persimilis
 
Y
 
Drosophila willistoni
 
Y
 
Drosophila virilis
 
Y
 
Drosophila mojavensis
 
Y
 
Drosophila grimshawi
 
 
 
hideOrthologs in non-Drosophila Dipterans (EOG6MSD6Q)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Aedes aegypti
Yellow fever mosquito 
 
Anopheles gambiae
Malaria mosquito 
 
Anopheles gambiae
Malaria mosquito 
 
Culex quinquefasciatus
Southern house mosquito 
 
hideOrthologs in non-Dipteran Insects (EOG6KWHP9)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Apis mellifera
Western honey bee 
Amel\GB54446
 
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG005970
 
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH11823
 
Atta cephalotes
Leafcutter ant 
Acep\ACEP27393
 
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO14074
 
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL14491
 
Linepithema humile
Argentine ant 
Lhum\LH12999
 
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB23384
 
Solenopsis invicta
Red fire ant 
Sinv\SINV21119
 
Acyrthosiphon pisum
Pea aphid 
 
Bombyx mori
Silkmoth 
 
Pediculus humanus
Human body louse 
 
Tribolium castaneum
Red flour beetle 
 
hideOrthologs in non-Insect Arthropods (EOG641NSW)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Daphnia pulex
Water flea 
 
Ixodes scapularis
Deer tick 
 
Ixodes scapularis
Deer tick 
 
Ixodes scapularis
Deer tick 
 
hideOrthologs in non-Arthropod Metazoa (EOG65F8H1)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Xenopus tropicalis
Western clawed frog 
Y
Xenopus tropicalis
Western clawed frog 
Y
Xenopus tropicalis
Western clawed frog 
Y
Gallus gallus
Domestic chicken 
Y
Gallus gallus
Domestic chicken 
Y
Gallus gallus
Domestic chicken 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Rattus norvegicus
Norway rat 
Y
Rattus norvegicus
Norway rat 
Y
Rattus norvegicus
Norway rat 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
hide Human Orthologs (5)
Gene
OMIM
HGNC
 
 
 
 
hideAAA Orthologs (9) based on analysis using Dmel annotation version 4.3
Organism
Gene
Drosophila sechellia
Drosophila erecta
Drosophila yakuba
Drosophila ananassae
Drosophila pseudoobscura pseudoobscura
Drosophila persimilis
Drosophila willistoni
Drosophila virilis
Drosophila mojavensis
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 12 )
Bloomington
Harvard
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 553 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
hide Antibody Information
hide Other Information
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hide Etymology
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Source for merge of: Argk CG4929
Source for merge of: CG5173 CG4929
Additional comments
Annotations CG4929, CG5173 merged as CG32031 in release 3 of the genome annotation.
Source for merge of Argk CG4929 was a shared cDNA (date:010720).
hide Other Comments
Investigation of the Argk isoenzyme system in flight muscle.
Developmentally regulated peak of arginine kinase activity in prepupae is under the influence of ecdysone. Altered doses of Eip75B and ecdysone inducible genes of the BRC alter the pattern of expression of Argk while altered dose of Eip74EF has no effect.
Immunological distances were measured by microcomplement fixation for 20 species of Drosophila Argk. The unit evolutionary period for Drosophila Argk is estimated to be 59 million years. The value predicted for vertebrate creatine kinase was 30 million years. The difference may be because a single gene encodes Drosophila Argk whereas three genes encode various forms of vertebrate creatine kinase.
Argk encodes two isozymes that have parallel gene-dosage responses, immunological similarities and cosegregation of electrophoretic mobility differences.
Structural gene for arginine kinase (ARGK) based on gene dosage studies. Cellular and mitochondrial forms behave as if both are products of the gene. (FBrf0042737).
 
high in body-wall and digestive-tract musculature;
 
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
hide Synonyms & Secondary IDs ( 13 )
Reported As
Symbol Synonym
Name Synonym
insect intestinal mucin iim22
Secondary FlyBase IDs
  • FBgn0035958
  • FBgn0052031
hide References ( 80 )
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hide Recent research papers ( 2 )
Franco et al., 2011, Mol. Cell. Proteomics 10(5): M110.002188
A Novel Strategy to Isolate Ubiquitin Conjugates Reveals Wide Role for Ubiquitination during Neural Development. [FBrf0213919]
Varma and Mishra, 2011, J. Biosci., Bangalore 36(3): 439--459
Dynamics of nuclear matrix proteome during embryonic development in Drosophila melanogaster. [FBrf0214552]