A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\Est-6

General Information
SymbolDmel\Est-6SpeciesD. melanogaster
NameEsterase 6Annotation symbolCG6917
Feature typeprotein_coding_geneFlyBase IDFBgn0000592
Gene Model StatusCurrent Stock availability 9 publicly available
Also Known AsEst6, Est, EST-5, Est-D
Genomic Location
Chromosome (arm)3LRecombination map3-35.9
Cytogenetic map69A1-69A1Sequence location3L:12,181,935..12,183,805 [+]

Genomic Maps

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modENCODE GBrowse
detailed view
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Automatically generated summary

See sections below for more information
The gene Esterase 6 is referred to in FlyBase by the symbol Dmel\Est-6 (CG6917, FBgn0000592). It is a protein_coding_gene from Drosophila melanogaster. It is reported to have molecular function: carboxylesterase activity. There is experimental evidence that it is involved in the biological process: pheromone biosynthetic process; courtship behavior; multicellular organism reproduction. 84 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Carboxylesterase type B, active site; Carboxylesterase type B, conserved site; Carboxylesterase, type B. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of extremely low expression. Peak expression observed in adult male stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, adult crop, adult heart, adult fat body, adult salivary gland, adult spermathecae, adult male accessory gland, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult central nervous system, adult hindgut, adult testis. Comments on Affy2 ProbeSet: ProbeSet 1631224_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of Est-6. Gene sequence location is 3L:12181935..12183805.

hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
Est-6: Esterase 6
The structural gene for the nonspecific carboxylesterase, [EST-6 (EC 3.1.1.1)]. One of the ten positively migrating esterases demonstrable with α-naphthyl acetate and Fast Blue BB after starch gel electrophoresis of homogenates. Molecular weight determinations on purified enzyme indicate that the active enzyme is a 62,000 to 65,000 dalton glycoprotein monomer (Mane, Tepper, and Richmond, 1983, Biochem. Genet. 21: 1019-40). Substrate specificities to different esters explored by Danford and Beardmore (1979). Specific EST-6 activity during development shows a prominant transient peak during second larval instar and shows a male-specific rise in activity beginning 36-48 hr after eclosion; males reach level double that of females (Sheehan, Richmond, and Cochrane, 1979, Insect Biochem. 9: 443-50); similar high levels found in male-like triploid intersexes (Aronshtam and Kuzin, 1974, Zh. Obsch. 35: 926-33) and X/X;tra/tra (Johnson, 1964, Genetics 50: 259). High concentrations of EST-6 found in ejaculatory duct; at mating, male level depleted and female level enhanced; transfer of activity from male to Est-60 female detected early during copulation, prior to the transfer of sperm, indicating that EST-6 is a component of seminal fluid (Richmond, Gilbert, Sheehan, Gromko, and Butterworth, 1980, Science 207: 1483-85). Enzyme levels in flies carrying different X chromosomes from natural populations in combination with constant autosomal complement vary suggesting X-linked modifiers (Tepper, Richmond, and Terry, 1981, Genetics 97: s103). In D. melanogaster X D. simulans hybrid males that carry a D. melanogaster X chromosome, the level of the D. melanogaster enzyme is reduced compared to that of the D. simulans enzyme; hybrid females have equivalent activities of the two enzymes (Korchkin, Aronshtam, and Matveeva, 1974, Biochem. Genet. 12: 9-24). Electrophoretic mobility reduced modestly from 1.10 to 1.08 for Est-6F and from 1.0 to 0.98 for Est-6S by m(Est-6) on the third chromosome (Cochrane and Richmond, 1979, Biochem. Genet. 17: 167-83).
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2011_10
FB2012_01
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
69A1-69A1  
Limits computationally determined from genome sequence between P{PZ}rols08232&P{lacW}l(3)j2D3j2D3 and P{PZ}l(3)0508805088  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
69A1-69A3  
(determined by in situ hybridisation)  
69A-69A  
(determined by in situ hybridisation)  
69A1-69A1  
(determined by in situ hybridisation)  
69A1-69A3  
(determined by in situ hybridisation)  
69A1-69A1  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Mapping based on 334 recombinants between h and th.
hide Gene Model & Products
Please see the GBrowse view of Dmel\Est-6 for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0290130 FBtr0076003 FBtr0076004 FBtr0076019 FBpp0288569 FBpp0075735 FBpp0075736 FBpp0075751 FBti0043621 FBti0045994
Comments on Gene Model
DGC clone appears problematic: unspliced intron (RH59357)
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0076003
  1820
  544
Additional Transcript Data & Comments
Reported size (kB)
1.83, 1.68 (unknown)
1.83, 1.68 (northern blot)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0075735  
61.1  
544  
5.57  
Additional Polypeptide Data & Comments
Reported size (kDa)
548 (aa); 59.4 (kD predicted)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Both Est-6 transcripts have similar developmental profiles, although the shorter one is present at lower levels. Expression is high in adult males.
Est-6 transcripts are detected in all developmental stages, but are expressed at very high levels in adult males.
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view CG6910-RB Est-6-RA Est-P-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0000592


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0000592
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of extremely low expression. Peak expression observed in adult male stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0000592 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 14
embryo 04-06hr
 
 14
embryo 06-08hr
 
 23
embryo 08-10hr
 
 94
embryo 10-12hr
 
 197
embryo 12-14hr
 
 122
embryo 14-16hr
 
 74
embryo 16-18hr
 
 161
embryo 18-20hr
 
 217
embryo 20-22hr
 
 165
embryo 22-24hr
 
 168
larva L1
 
 1196
larva L2
 
 1985
larva L3 12hr old
 
 2678
larva L3 puffstage 1-2
 
 313
larva L3 puffstage 3-6
 
 49
larva L3 puffstage 7-9
 
 23
white prepupae new
 
 20
white prepupae 12hr
 
 140
white prepupae 24hr
 
 57
pupae 2d postWPP
 
 118
pupae 3d postWPP
 
 617
pupae 4d postWPP
 
 647
adult male 01day
 
 26923
adult male 05day
 
 39851
adult male 30day
 
 25595
adult female 01day
 
 3362
adult female 05day
 
 3152
adult female 30day
 
 2231
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 14
embryo 04-06hr
 
 14
embryo 06-08hr
 
 23
embryo 08-10hr
 
 94
embryo 10-12hr
 (197)
embryo 12-14hr
 (122)
embryo 14-16hr
 
 74
embryo 16-18hr
 (161)
embryo 18-20hr
 (217)
embryo 20-22hr
 (165)
embryo 22-24hr
 (168)
larva L1
 (1196)
larva L2
 (1985)
larva L3 12hr old
 (2678)
larva L3 puffstage 1-2
 (313)
larva L3 puffstage 3-6
 
 49
larva L3 puffstage 7-9
 
 23
white prepupae new
 
 20
white prepupae 12hr
 (140)
white prepupae 24hr
 
 57
pupae 2d postWPP
 (118)
pupae 3d postWPP
 (617)
pupae 4d postWPP
 (647)
adult male 01day
 (26923)
adult male 05day
 (39851)
adult male 30day
 (25595)
adult female 01day
 (3362)
adult female 05day
 (3152)
adult female 30day
 (2231)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 14
embryo 04-06hr
 
 14
embryo 06-08hr
 
 23
embryo 08-10hr
 
 94
embryo 10-12hr
 
 197
embryo 12-14hr
 
 122
embryo 14-16hr
 
 74
embryo 16-18hr
 
 161
embryo 18-20hr
 
 217
embryo 20-22hr
 
 165
embryo 22-24hr
 
 168
larva L1
 
 1196
larva L2
 (1985)
larva L3 12hr old
 (2678)
larva L3 puffstage 1-2
 
 313
larva L3 puffstage 3-6
 
 49
larva L3 puffstage 7-9
 
 23
white prepupae new
 
 20
white prepupae 12hr
 
 140
white prepupae 24hr
 
 57
pupae 2d postWPP
 
 118
pupae 3d postWPP
 
 617
pupae 4d postWPP
 
 647
adult male 01day
 (26923)
adult male 05day
 (39851)
adult male 30day
 (25595)
adult female 01day
 (3362)
adult female 05day
 (3152)
adult female 30day
 (2231)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 14
embryo 04-06hr
 
 14
embryo 06-08hr
 
 23
embryo 08-10hr
 
 94
embryo 10-12hr
 
 197
embryo 12-14hr
 
 122
embryo 14-16hr
 
 74
embryo 16-18hr
 
 161
embryo 18-20hr
 
 217
embryo 20-22hr
 
 165
embryo 22-24hr
 
 168
larva L1
 
 1196
larva L2
 
 1985
larva L3 12hr old
 
 2678
larva L3 puffstage 1-2
 
 313
larva L3 puffstage 3-6
 
 49
larva L3 puffstage 7-9
 
 23
white prepupae new
 
 20
white prepupae 12hr
 
 140
white prepupae 24hr
 
 57
pupae 2d postWPP
 
 118
pupae 3d postWPP
 
 617
pupae 4d postWPP
 
 647
adult male 01day
 (26923)
adult male 05day
 (39851)
adult male 30day
 (25595)
adult female 01day
 
 3362
adult female 05day
 
 3152
adult female 30day
 
 2231
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 14
embryo 04-06hr
 
 14
embryo 06-08hr
 
 23
embryo 08-10hr
 
 94
embryo 10-12hr
 
 197
embryo 12-14hr
 
 122
embryo 14-16hr
 
 74
embryo 16-18hr
 
 161
embryo 18-20hr
 
 217
embryo 20-22hr
 
 165
embryo 22-24hr
 
 168
larva L1
 
 1196
larva L2
 
 1985
larva L3 12hr old
 
 2678
larva L3 puffstage 1-2
 
 313
larva L3 puffstage 3-6
 
 49
larva L3 puffstage 7-9
 
 23
white prepupae new
 
 20
white prepupae 12hr
 
 140
white prepupae 24hr
 
 57
pupae 2d postWPP
 
 118
pupae 3d postWPP
 
 617
pupae 4d postWPP
 
 647
adult male 01day
 
 26923
adult male 05day
 
 39851
adult male 30day
 
 25595
adult female 01day
 
 3362
adult female 05day
 
 3152
adult female 30day
 
 2231
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0000592 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 14
embryo 04-06hr
 
 14
embryo 06-08hr
 
 23
embryo 08-10hr
 
 94
embryo 10-12hr
 
 197
embryo 12-14hr
 
 122
embryo 14-16hr
 
 74
embryo 16-18hr
 
 161
embryo 18-20hr
 
 217
embryo 20-22hr
 
 165
embryo 22-24hr
 
 168
larva L1
 
 1196
larva L2
 
 1985
larva L3 12hr old
 
 2678
larva L3 puffstage 1-2
 
 313
larva L3 puffstage 3-6
 
 49
larva L3 puffstage 7-9
 
 23
white prepupae new
 
 20
white prepupae 12hr
 
 140
white prepupae 24hr
 
 57
pupae 2d postWPP
 
 118
pupae 3d postWPP
 
 617
pupae 4d postWPP
 
 647
adult male 01day
 
 26923
adult male 05day
 
 39851
adult male 30day
 
 25595
adult female 01day
 
 3362
adult female 05day
 
 3152
adult female 30day
 
 2231
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 14
embryo 04-06hr
 
 14
embryo 06-08hr
 
 23
embryo 08-10hr
 
 94
embryo 10-12hr
 (197)
embryo 12-14hr
 122
embryo 14-16hr
 
 74
embryo 16-18hr
 (161)
embryo 18-20hr
 (217)
embryo 20-22hr
 (165)
embryo 22-24hr
 (168)
larva L1
 (1196)
larva L2
 (1985)
larva L3 12hr old
 (2678)
larva L3 puffstage 1-2
 (313)
larva L3 puffstage 3-6
 
 49
larva L3 puffstage 7-9
 
 23
white prepupae new
 
 20
white prepupae 12hr
 140
white prepupae 24hr
 
 57
pupae 2d postWPP
 118
pupae 3d postWPP
 (617)
pupae 4d postWPP
 (647)
adult male 01day
 (26923)
adult male 05day
 (39851)
adult male 30day
 (25595)
adult female 01day
 (3362)
adult female 05day
 (3152)
adult female 30day
 (2231)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 14
embryo 04-06hr
 
 14
embryo 06-08hr
 
 23
embryo 08-10hr
 
 94
embryo 10-12hr
 
 197
embryo 12-14hr
 
 122
embryo 14-16hr
 
 74
embryo 16-18hr
 
 161
embryo 18-20hr
 
 217
embryo 20-22hr
 
 165
embryo 22-24hr
 
 168
larva L1
 
 1196
larva L2
 1985
larva L3 12hr old
 (2678)
larva L3 puffstage 1-2
 
 313
larva L3 puffstage 3-6
 
 49
larva L3 puffstage 7-9
 
 23
white prepupae new
 
 20
white prepupae 12hr
 
 140
white prepupae 24hr
 
 57
pupae 2d postWPP
 
 118
pupae 3d postWPP
 
 617
pupae 4d postWPP
 
 647
adult male 01day
 (26923)
adult male 05day
 (39851)
adult male 30day
 (25595)
adult female 01day
 (3362)
adult female 05day
 (3152)
adult female 30day
 2231
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 14
embryo 04-06hr
 
 14
embryo 06-08hr
 
 23
embryo 08-10hr
 
 94
embryo 10-12hr
 
 197
embryo 12-14hr
 
 122
embryo 14-16hr
 
 74
embryo 16-18hr
 
 161
embryo 18-20hr
 
 217
embryo 20-22hr
 
 165
embryo 22-24hr
 
 168
larva L1
 
 1196
larva L2
 
 1985
larva L3 12hr old
 
 2678
larva L3 puffstage 1-2
 
 313
larva L3 puffstage 3-6
 
 49
larva L3 puffstage 7-9
 
 23
white prepupae new
 
 20
white prepupae 12hr
 
 140
white prepupae 24hr
 
 57
pupae 2d postWPP
 
 118
pupae 3d postWPP
 
 617
pupae 4d postWPP
 
 647
adult male 01day
 (26923)
adult male 05day
 (39851)
adult male 30day
 (25595)
adult female 01day
 
 3362
adult female 05day
 
 3152
adult female 30day
 
 2231
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 14
embryo 04-06hr
 
 14
embryo 06-08hr
 
 23
embryo 08-10hr
 
 94
embryo 10-12hr
 
 197
embryo 12-14hr
 
 122
embryo 14-16hr
 
 74
embryo 16-18hr
 
 161
embryo 18-20hr
 
 217
embryo 20-22hr
 
 165
embryo 22-24hr
 
 168
larva L1
 
 1196
larva L2
 
 1985
larva L3 12hr old
 
 2678
larva L3 puffstage 1-2
 
 313
larva L3 puffstage 3-6
 
 49
larva L3 puffstage 7-9
 
 23
white prepupae new
 
 20
white prepupae 12hr
 
 140
white prepupae 24hr
 
 57
pupae 2d postWPP
 
 118
pupae 3d postWPP
 
 617
pupae 4d postWPP
 
 647
adult male 01day
 
 26923
adult male 05day
 
 39851
adult male 30day
 
 25595
adult female 01day
 
 3362
adult female 05day
 
 3152
adult female 30day
 
 2231
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0000592


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0000592
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, adult crop, adult heart, adult fat body, adult salivary gland, adult spermathecae, adult male accessory gland, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult central nervous system, adult hindgut, adult testis.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0000592 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 2.4
Larval Midgut
 
 9.9
Larval Hindgut
 
 5.2
Larval Malpighian Tubules
 
 2
Larval Fat Body
 
 29.6
Larval Salivary Gland
 
 9.7
Larval Trachea
 
 15.35
Larval Carcass
 
 7.075
Adult Head
 
 2367.7
Adult Eye
 
 823.875
Adult Brain
 
 130.2
Adult Thoracic-Abdominal Ganglion
 
 177.4
Adult Crop
 
 508.6
Adult Midgut
 
 3.8
Adult Hindgut
 
 141.8
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 2194
Adult Salivary Gland
 
 15630.8
Adult Heart
 
 2006.8
Adult VirginFemale Spermatheca
 
 1823.1
Adult InseminatedFemale Spermatheca
 
 2140.7
Adult Ovary
 
 3.5
Adult Testis
 
 121.7
Adult Male Accessory Gland
 
 2568.2
Adult Carcass
 
 1976.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 2.4
Larval Midgut
 
 9.9
Larval Hindgut
 
 5.2
Larval Malpighian Tubules
 
 2
Larval Fat Body
 
 29.6
Larval Salivary Gland
 
 9.7
Larval Trachea
 
 15.35
Larval Carcass
 
 7.075
Adult Head
 (2367.7)
Adult Eye
 (823.875)
Adult Brain
 
 130.2
Adult Thoracic-Abdominal Ganglion
 
 177.4
Adult Crop
 508.6
Adult Midgut
 
 3.8
Adult Hindgut
 
 141.8
Adult Malpighian Tubules no informative data
Adult Fat Body
 (2194)
Adult Salivary Gland
 (15630.8)
Adult Heart
 (2006.8)
Adult VirginFemale Spermatheca
 (1823.1)
Adult InseminatedFemale Spermatheca
 (2140.7)
Adult Ovary
 
 3.5
Adult Testis
 
 121.7
Adult Male Accessory Gland
 (2568.2)
Adult Carcass
 (1976.2)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 2.4
Larval Midgut
 
 9.9
Larval Hindgut
 
 5.2
Larval Malpighian Tubules
 
 2
Larval Fat Body
 
 29.6
Larval Salivary Gland
 
 9.7
Larval Trachea
 
 15.35
Larval Carcass
 
 7.075
Adult Head
 (2367.7)
Adult Eye
 
 823.875
Adult Brain
 
 130.2
Adult Thoracic-Abdominal Ganglion
 
 177.4
Adult Crop
 
 508.6
Adult Midgut
 
 3.8
Adult Hindgut
 
 141.8
Adult Malpighian Tubules no informative data
Adult Fat Body
 (2194)
Adult Salivary Gland
 (15630.8)
Adult Heart
 (2006.8)
Adult VirginFemale Spermatheca
 (1823.1)
Adult InseminatedFemale Spermatheca
 (2140.7)
Adult Ovary
 
 3.5
Adult Testis
 
 121.7
Adult Male Accessory Gland
 (2568.2)
Adult Carcass
 (1976.2)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 2.4
Larval Midgut
 
 9.9
Larval Hindgut
 
 5.2
Larval Malpighian Tubules
 
 2
Larval Fat Body
 
 29.6
Larval Salivary Gland
 
 9.7
Larval Trachea
 
 15.35
Larval Carcass
 
 7.075
Adult Head
 
 2367.7
Adult Eye
 
 823.875
Adult Brain
 
 130.2
Adult Thoracic-Abdominal Ganglion
 
 177.4
Adult Crop
 
 508.6
Adult Midgut
 
 3.8
Adult Hindgut
 
 141.8
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 2194
Adult Salivary Gland
 
 15630.8
Adult Heart
 
 2006.8
Adult VirginFemale Spermatheca
 
 1823.1
Adult InseminatedFemale Spermatheca
 
 2140.7
Adult Ovary
 
 3.5
Adult Testis
 
 121.7
Adult Male Accessory Gland
 
 2568.2
Adult Carcass
 
 1976.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0000592 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 2.4
Larval Midgut
 
 9.9
Larval Hindgut
 
 5.2
Larval Malpighian Tubules
 
 2
Larval Fat Body
 
 29.6
Larval Salivary Gland
 
 9.7
Larval Trachea
 
 15.35
Larval Carcass
 
 7.075
Adult Head
 
 2367.7
Adult Eye
 
 823.875
Adult Brain
 
 130.2
Adult Thoracic-Abdominal Ganglion
 
 177.4
Adult Crop
 
 508.6
Adult Midgut
 
 3.8
Adult Hindgut
 
 141.8
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 2194
Adult Salivary Gland
 
 15630.8
Adult Heart
 
 2006.8
Adult VirginFemale Spermatheca
 
 1823.1
Adult InseminatedFemale Spermatheca
 
 2140.7
Adult Ovary
 
 3.5
Adult Testis
 
 121.7
Adult Male Accessory Gland
 
 2568.2
Adult Carcass
 
 1976.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 2.4
Larval Midgut
 
 9.9
Larval Hindgut
 
 5.2
Larval Malpighian Tubules
 
 2
Larval Fat Body
 
 29.6
Larval Salivary Gland
 
 9.7
Larval Trachea
 
 15.35
Larval Carcass
 
 7.075
Adult Head
 (2367.7)
Adult Eye
 (823.875)
Adult Brain
 
 130.2
Adult Thoracic-Abdominal Ganglion
 
 177.4
Adult Crop
 508.6
Adult Midgut
 
 3.8
Adult Hindgut
 
 141.8
Adult Malpighian Tubules no informative data
Adult Fat Body
 (2194)
Adult Salivary Gland
 (15630.8)
Adult Heart
 (2006.8)
Adult VirginFemale Spermatheca
 (1823.1)
Adult InseminatedFemale Spermatheca
 (2140.7)
Adult Ovary
 
 3.5
Adult Testis
 
 121.7
Adult Male Accessory Gland
 (2568.2)
Adult Carcass
 (1976.2)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 2.4
Larval Midgut
 
 9.9
Larval Hindgut
 
 5.2
Larval Malpighian Tubules
 
 2
Larval Fat Body
 
 29.6
Larval Salivary Gland
 
 9.7
Larval Trachea
 
 15.35
Larval Carcass
 
 7.075
Adult Head
 (2367.7)
Adult Eye
 
 823.875
Adult Brain
 
 130.2
Adult Thoracic-Abdominal Ganglion
 
 177.4
Adult Crop
 
 508.6
Adult Midgut
 
 3.8
Adult Hindgut
 
 141.8
Adult Malpighian Tubules no informative data
Adult Fat Body
 (2194)
Adult Salivary Gland
 (15630.8)
Adult Heart
 (2006.8)
Adult VirginFemale Spermatheca
 (1823.1)
Adult InseminatedFemale Spermatheca
 (2140.7)
Adult Ovary
 
 3.5
Adult Testis
 
 121.7
Adult Male Accessory Gland
 (2568.2)
Adult Carcass
 (1976.2)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 2.4
Larval Midgut
 
 9.9
Larval Hindgut
 
 5.2
Larval Malpighian Tubules
 
 2
Larval Fat Body
 
 29.6
Larval Salivary Gland
 
 9.7
Larval Trachea
 
 15.35
Larval Carcass
 
 7.075
Adult Head
 
 2367.7
Adult Eye
 
 823.875
Adult Brain
 
 130.2
Adult Thoracic-Abdominal Ganglion
 
 177.4
Adult Crop
 
 508.6
Adult Midgut
 
 3.8
Adult Hindgut
 
 141.8
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 2194
Adult Salivary Gland
 
 15630.8
Adult Heart
 
 2006.8
Adult VirginFemale Spermatheca
 
 1823.1
Adult InseminatedFemale Spermatheca
 
 2140.7
Adult Ovary
 
 3.5
Adult Testis
 
 121.7
Adult Male Accessory Gland
 
 2568.2
Adult Carcass
 
 1976.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 2367.7
 
NA 
Eye
 
 823.875
 
NA 
Brain
 
 130.2
 
2.4 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 177.4
 
NA 
Crop
 
 508.6
 
9.9 
Midgut
 
 3.8
 
5.2 
Hindgut
 
 141.8
 
Malpighian Tubules
 
 no informative data
 
29.6 
Fat Body
 
 2194
 
9.7 
Salivary Gland
 
 15630.8
 
NA 
Heart
 
 2006.8
 
15.35 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 1823.1
 
NA 
InseminatedFemale Spermatheca
 
 2140.7
 
NA 
Ovary
 
 3.5
 
NA 
Testis
 
 121.7
 
NA 
Male Accessory Gland
 
 2568.2
 
7.075 
Carcass
 
 1976.2

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
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Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 65 )
For All Classical Alleles Show

Allele of Est-6ClassMutagenStocksKnown lesion
Est-6S4 --
Est-6F3 --
Est-601 Yes
Est-6VS
1 --
Est-6unspecifiedamorphic allele - genetic evidence, loss of function allele
0 Yes
Est-60.73
0 --
Est-60.79
0 --
Est-60.95
0 --
Est-60.97
0 --
Est-61.07
0 --
Est-61.0
0 --
Est-61.11
0 --
Est-61.15
0 --
Est-61.1
0 --
Est-61.25
0 --
Est-6174F0 Yes
Est-6255S0 Yes
Est-6357F0 Yes
Est-6377F0 Yes
Est-63F0 Yes
Est-6438S0 --
Est-6483F0 Yes
Est-6498F0 --
Est-64aF0 Yes
Est-64bF0 Yes
Est-6510S0 Yes
Est-6517S0 Yes
Est-6521F0 --
Est-6521S0 Yes
Est-6565F0 --
Est-6581F0 Yes
Est-65F0 Yes
Est-66S0 Yes
Est-67S0 Yes
Est-694F0 Yes
Est-6968F0 --
Est-690 Yes
Est-69US
0 Yes
Est-6F'0 Yes
Est-6F-1461S0 Yes
Est-6F-274F0 Yes
Est-6F-517F0 Yes
Est-6F-531F0 Yes
Est-6F-611F0 Yes
Est-6F-775F0 Yes
Est-6F-96S0 Yes
Est-6F1
0 --
Est-6F2
0 --
Est-6F36
0 --
Est-6F3a
0 --
Est-6F4
0 --
Est-6S-114S0 Yes
Est-6S-1224F0 Yes
Est-6S-2588S0 Yes
Est-6S-26F0 --
Est-6S-501S0 Yes
Est-6S-549S0 Yes
Est-6S-5F0 Yes
Est-6S1
0 --
Est-6S2
0 --
Est-6S3
0 --
Est-6Slo
0 --
Est-6U0 Yes
Est-6US-255F0 Yes
Est-6VF0 Yes
hide Alleles Carried on Transgenic Constructs ( 19 )
For All Alleles Carried on Transgenic Constructs Show

Allele of Est-6ClassMutagenStocksKnown lesion
Est-6GD128272 Yes
Est-6+t3.9.P10 Yes
Est-6+t3.9.P70 Yes
Est-6-1174.+18590 Yes
Est-6-1174.+27310 Yes
Est-6-1174.+41740 Yes
Est-6-171.+18590 Yes
Est-6-24.+42520 Yes
Est-6-283.+18590 Yes
Est-6-613.+18590 Yes
Est-6-844.+18590 Yes
Est-6C-680 Yes
Est-6GS10 Yes
Est-6GS20 Yes
Est-6GS30 Yes
Est-6GS40 Yes
Est-6H187E0 Yes
Est-6H187Q0 Yes
Est-6T-680 Yes
hide Aneuploid Aberrations
Disrupted in
Not disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
UAS construct
Insertions
Type of insertions
Name
Expression data
miscellaneous insertions
hide Gene Ontology: Function, Process & Cellular Component ( 12 unique terms )
hide Terms Based on Experimental Evidence ( 4 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
inferred from mutant phenotype
inferred from direct assay AND inferred from mutant phenotype
Cellular Component
CV term
References
inferred from direct assay
hide Terms Based on Predictions or Assertions ( 8 terms )
Molecular Function
CV term
References
non-traceable author statement
traceable author statement
Biological Process
CV term
References
traceable author statement
traceable author statement
traceable author statement
traceable author statement
traceable author statement
Cellular Component ( 0 terms)
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
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hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
Est-6 allele
Gene
References
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BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 9 )
Bloomington
Kyoto
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 23 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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hide Discoverer
Wright, Aug. 1961.
 
hide Etymology
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for identity of: Est-6 CG6917
Source for database merge of
Additional comments
Allelic variation in Est-6 is expressed in electrophoretic mobility (complicated by heterogeneity for m(Est-6) on chromosome 3), thermal stability and level of activity. The same alleles have been designated differently by different authors. The allele records attempt to define the equivalences. Some use electrophoretic mobility relative to that of Est-6S = 1.00 in designating alleles. Relative mobility estimates vary within and among gels; also relations between mobilities on starch and acrylamide are nonlinear; consequently, similar but not identical estimates may not represent real differences.
 
hide Other Comments
In a sample of 79 genes with multiple introns, 33 showed significant heterogeneity in G+C content among introns of the same gene and significant positive correspondence between the intron and the third codon position G+C content within genes. These results are consistent with selection adding against preferred codons at the start of genes.
Upstream regions of Est-6 (1,150bp) and Dpse\Est-5B (5,100bp and 1,224bp) genes confer different expression patterns on a reporter gene. Common sites of expression are the third antennal segment, maxillary palps and adult salivary glands. Deletion analysis reveals the genes have a different organisation of regulatory elements that control expression in conserved tissue locations. Results suggest that the conservation of the expression pattern of genes that evolved from a common ancestor is not necessarily accompanied by an evolutionary preservation of the corresponding cis-regulatory elements.
Ancestral activities in the haemolymph and ejaculatory bulb are directed by conserved sequences close to the transcription initiation site. The more recently acquired site of activity, the anterior ejaculatory duct, is directed by more distal sequences lying both 5' and 3' of the coding region. The 3' sequences appear to lie within the transcription unit of the adjacent Est-P gene.
The effects of mutations of the four N-linked glycosylation sites is investigated. the effects of the mutation on aspects of Est-6 biochemistry and reproductive biology.
Chromosome homologies of Muller's element D (J chromosome in the Paleartic species and XR chromosome arm in Nearctic species) and of element E (O chromosome in the Paleartic species and 2 chromosome in Nearctic species) have been confirmed by single copy probes in the species of the obscura group and in D.melanogaster.
Substantial heritable variation for larval and pupal Est-6 activity is detected among 17 third chromosome isoallelic lines extracted from a single natural population. Weak correlations between larval and pupal activity and between larval and adult female activity are found, with effectively negligible associations between larval and adult male activities and between pupal and either adult measure. There is a largely independent genetic control of variation in the four measures. A comparison of the nucleotide polymorphisms associated with the activity variation likewise indicates distinct genetic bases for the variation in the four measures.
Esterase-6 has been identified, on the basis of a partial N-terminal sequence, as one of the proteins recognised by anti-Horse Radish Peroxidase antibodies.
Patterns of Est-6 expression are broadly similar in D.melanogaster, D.simulans and D.mauritiana. The major differences are in newly eclosed female activities and in 5 day adults. The genetic basis of the observed quantitative differences between Dsim\Est-6, Dmau\Est-6 and Est-6 is assayed using germ line transformation and analysis reveals interspecific differences are due to cis- and trans-inherited factors contained within the transferred DNA.
Flies show a positive correlation between male reproductive activity and the activity of Est-6 in the male reproductive system.
Deletion mutant Ecol\lacZ fusions generated in vitro allow definition of four independently acting Est-6 regulatory regions in the 1132bp 5' to the translation initiation codon. These regions are responsible for expression in the ejaculatory duct, salivary glands, ejaculatory bulb and respiratory system, antennae and maxillary palps.
Site directed in vitro mutagenesis of position 187 suggests the residue interacts directly with the substrate alkyl group and this interaction is fully realised in the transition state.
Pattern of allele frequency has been studied for seven loci, Aph-3, Est-6, Adh, Fdh, Aldox-1, Gpdh and Mdh1, in wild Indian populations of D.melanogaster: the allelic frequency patterns do not agree with those from temperate region populations.
Extent of genetic variation at esterase-encoding loci in D.melanogaster, D.takahashii, D.nepalensis, D.malerkotliana, D.bipectinata and D.ananassae has been studied: all loci depict Fast/Slow migration on starch gel diallele variation patterns.
The sequences of the Dpse\Est-5A, Dpse\Est-5B and Dpse\Est-5C genes, and the D.melanogaster Est-6 and Est-P genes have been compared.
Comparison of CpG distribution in the coding region of 121 genes from six species supports the mCpG mutational hotspot explanation of CpG suppression in methylated species at position II-III and III-I.
No difference in allele fixed in lines selected over 700 generations for high (negative) and low (positive) geotaxis.
Protein product identified as EST6 isozyme.
Tests of natural selection on Est-6 alleles demonstrate that a temperature- dependent heterozygote advantage may contribute to maintenance of the Est-6 polymorphism: heterozygotes of each sex produced more progeny at 18oC than 25oC.
Est-6 expression has been studied.
The Est-6 and Est-P genes, which are arranged as a tandem repeat, have been cloned and sequenced.
Male derived Est-6 is initially transferred into the females reproductive tract but is translocated within minutes of the beginning of mating into the haemolymph. Seminal-fluid Est-6 is detected by Western blot analysis in mated female haemolymph for as long as 4 days after mating. Results suggest that the enzyme remains in females for a period long enough to account for many of its behavioural and physiological effects.
Allelic frequencies have been determined between European and African populations. African populations show a greater genetic diversity, as measured by the number of alleles found. Within each geographic group there is a homogeneity of allele frequencies.
The structural gene for the nonspecific carboxylesterase, (EST-6). One of the ten positively migrating esterases demonstrable with α-naphthyl acetate and Fast Blue BB after starch gel electrophoresis of homogenates. Molecular weight determinations on purified enzyme indicate that the active enzyme is a 62,000 to 65,000 dalton glycoprotein monomer (Mane et al., 1983). Substrate specificities to different esters explored by Danford and Beardmore (1979). Specific EST-6 activity during development shows a prominent transient peak during second larval instar and shows a male-specific rise in activity beginning 36-48 hr after eclosion; males reach level double that of females (Sheehan, Richmond and Cochrane, 1979); similar high levels found in male-like triploid intersexes (Aronshtam and Kuzin, 1974) and X/X;tra/tra (Johnson, 1964). High concentrations of EST-6 found in ejaculatory duct; at mating, male level depleted and female level enhanced; transfer of activity from male to Est-60 female detected early during copulation, prior to the transfer of sperm, indicating that EST-6 is a component of seminal fluid (Richmond, Gilbert, Sheehan et al., 1980). Enzyme levels in flies carrying different X chromosomes from natural populations in combination with constant autosomal complement vary suggesting X-linked modifiers (Tepper et al., 1981). In D.melanogaster X D.simulans hybrid males that carry a D.melanogaster X chromosome, the level of the D.melanogaster enzyme is reduced compared to that of the D.simulans enzyme; hybrid females have equivalent activities of the two enzymes (Korochkin et al., 1974). Electrophoretic mobility reduced modestly from 1.10 to 1.08 for Est-6F and from 1.0 to 0.98 for Est-6S by m(Est-6) on the third chromosome (Cochrane and Richmond, 1979a).
 
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Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
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BioGRID - A database of protein and genetic interactions
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DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 19 )
Reported As
Symbol Synonym
Name Synonym
Carboxyl ester hydrolase
esterase 6
Secondary FlyBase IDs
  • FBgn0017620
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hide Recent research papers ( 1 )
Baycin-Hizal et al., 2011, J. Proteome Res. 10(6): 2777--2784
GlycoFly: A Database of Drosophila N-linked Glycoproteins Identified Using SPEG-MS Techniques. [FBrf0213834]
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