A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Gene Dmel\eve

General Information
SymbolDmel\eveSpeciesD. melanogaster
Nameeven skippedAnnotation symbolCG2328
Feature typeprotein_coding_geneFlyBase IDFBgn0000606
Created / Updated2003-12-02/2003-12-02
Genomic Location
Chromosome (arm)2RRecombination map
Cytogenetic map46C10-46C10Sequence location2R:5,866,746..5,868,284 [+]
Map ( GBrowse ) detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene even skipped is referred to in FlyBase by the symbol eve (CG2328, FBgn0000606). It has the cytological map location 46C10. Its sequence location is 2R:5866746..5868284. Its molecular function is described as: transcription factor activity; sequence-specific DNA binding. It is involved in the biological processes described with 17 unique terms, many of which group under: anatomical structure development; embryonic pattern specification; regionalization; embryonic development; cell fate commitment; regulation of developmental process; organ development; head segmentation; periodic partitioning by pair rule gene; trunk segmentation; cell fate determination; regulation of neurogenesis; cephalic furrow formation; regulation of metabolic process; anterior/posterior axis specification. 128 alleles are reported. The phenotypes of these alleles are annotated with 48 unique terms, many of which group under: organ system; nervous system; hypodermal muscle of larval abdomen; blastoderm embryo; extended germ band embryo; gastrula embryo; embryonic nervous system; cuticle; thoracic segment; embryonic neuron. It has one annotated transcript and one annotated polypeptide.

External Summaries
hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
eve: even skipped
Homozygous lethal; embryos homozygous for a null allele or a deficiency fail to undergo segmentation and their ventral surfaces are covered by a lawn of short denticles pointed toward the midline; denticles in the anterior region show thoracic characteristics suggesting that segmental identities persist in the absence of segmentation. All derivatives of gnathal segments are missing, such as maxillary sense organs, cirri, mouth hooks, labial sense organs and the mandibular parts of the cephalopharyngeal skeleton; the labrum, antennal sense organs, and a rudimentary skeleton are the only remains of the larval head. Posteriorally, anal plates and some sensory organs persist as do remnants of spiracles, filzkorper, and tufts. Homozygotes and hemizygotes for hypomorphic alleles display pair-rule segmentation defects. Denticle bands and adjacent naked cuticle of the prothoracic, metathoracic and even-numbered abdominal segments removed; some naked cuticle of the adjacent segment removed as well (i.e., the odd numbered parasegments are removed). Combinations of alleles with Df(2R)eve raised at different temperatures can achieve an array of phenotypes between these extremes. Expression of eve is first detected at the eleventh nuclear division following fertilization; at this stage, eve protein is uniformly distributed among the nuclei, both at the periphery and deep within the egg; by the thirteenth nuclear division, the anterior one-third of the embryo is devoid of detectable protein; over the next 20 minutes, the antibody staining in the posterior two-thirds of the embryo becomes concentrated in seven transverse stripes four or five cells wide separated by stripes three to four cells wide with lower levels of staining. By the time of germ-band elongation, the seven stripes have become narrowed and sharply defined and seven new weakly expressing stripes, one to two cells wide, appear between the major stripes; during germ-band elongation all stripes gradually disappear. As eve stripes become more sharply defined so too do ftz stripes, no longer overlapping eve stripes, but forming a complementary pattern. At the same time, a group of expressing cells appears at the posterior end of the germ band; these cells form a ring around the anal plate during germ-band shortening. Also during germ-band shortening, a specific subset of sixteen neurons in each hemisegment of the CNS expresses eve product as does a row of cell clusters on either side of the dorsal midline; lateral to these clusters are curious rings of weakly staining cells; the dorsal cells do not appear to be neuronal (Frasch, Hoey, Rushlow, Doyle, and Levine, 1987, EMBO J. 6: 749-59; Frasch and Levine, 1987, Genes Dev. 1: 981-95). In homozygous eve1 embryos switched to restrictive temperature during neurogenesis, four specifically studied eve-expressing neurons in each hemisegment are found to persist; two of them develop normally, but two send axonal processes to abnormal destinations [Doe, Smouse, and Goodman, 1988, Nature (London) 333: 376-78]. Frasch and Levine observe that segmentation-gene-mutations generally have reciprocal effects on the expression of eve and ftz, leading them to postulate that their promoters respond reciprocally to the same positional cues. eve concluded to be an early pair-rule gene, since its expression is modified by gap-gene mutations, but not by most other pair-rule gene mutations nor by segment-polarity gene mutations. Three pair-rule genes do influence eve expression: in either eve or h genotypes, eve expression is reduced and in run embryos eve is overexpressed (Frasch and Levine, 1987). In eve embryos, en stripes do not appear (Macdonald, Ingham, and Struhl, 1986, Cell 47: 721-34). Ubx protein is detected at high level in odd-numbered parasegments from 7 through 13 rather than in every parasegment from 6 through 12 (Martinez-Arias, and White, 1988, Development 102: 325-38). ftz stripes are disrupted in regularity of position, size, and timing (Carroll and Scott, 1986, Cell 45: 113-26).
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
46C10-46C10  
Limits computationally determined from genome sequence between P{lacW}Adamk13906&P{EP}Pka-R2EP2162 and P{PZ}14-3-3ζ07103  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
46C8-46F6
Complementation data from unspecified deficiency chromosomes.  
46C3-46C11
(determined by in situ hybridisation)  
46C-46C
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Molecular Map Data
Gene Order (in direction of increasing cytology)
References
Gene Order (overall orientation not stated)
References
Overall orientation not stated: Adam+ eve+ TER94+
hide Gene Model & Products
Please see the GBrowse view of Dmel\eve for information on other features
detailed view FBtr0088390 FBpp0087478
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0088390
  1468
  376
Additional Transcript Data & Comments
Reported size (kB)
1.4 (northern blot, sequence analysis)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kD)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
eve-PA  
FBpp0087478  
40.0  
376  
9.73  
Additional Polypeptide Data & Comments
Reported size (kD)
376 (aa); 40 (kD predicted)
Comments
External Data
Linkouts
PANTHER - Protein classification by function, families, and pathways
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Homeobox (IPR001356)
Homeodomain-like (IPR009057)
PDB - Protein Data Bank. An information portal to biological macromolecular structures
TRANSFAC - Eukaryotic transcription factors, their genomic binding sites, and DNA-binding profiles
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  • R02057
  • R02058
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  • R02060
  • R02061
  • R02062
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  • R02064
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  • R02487
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  • T00187
  • T00188
  • T00189
  • T00272
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
 
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
    Maps to
    Does NOT map to
    Identified with
    hide Mapped Features & Mutations
    Please see GBrowse or insertion reports for information on insertions of transgenic constructs and features not listed here
    Type
    Symbol & Location
    Additional Notes
    References
    point mutation
    comment=Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change
    evidence=experimental
    pr_change=T75I|eve-PA
    na_change=C5867214T
    point mutation
    evidence=experimental
    pr_change=Q106@|eve-PA
    na_change=C5867306T
    point mutation
    evidence=experimental
    pr_change=R121H|eve-PA
    na_change=G5867352A
    protein binding site
    eve-protein_bind-1
    2R:5,863,302..5,863,310
    bound_moiety=hb-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-10
    2R:5,863,055..5,863,064
    bound_moiety=hb-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-11
    2R:5,863,075..5,863,084
    bound_moiety=hb-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-12
    2R:5,873,153..5,873,159
    bound_moiety=tin-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-13
    2R:5,863,093..5,863,102
    bound_moiety=hb-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-14
    2R:5,863,281..5,863,290
    bound_moiety=hb-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-15
    2R:5,865,706..5,865,728
    bound_moiety=gt-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-16
    2R:5,866,679..5,866,703
    bound_moiety=eve-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-17
    2R:5,866,747..5,866,762
    evidence=experimental
    protein binding site
    eve-protein_bind-18
    2R:5,872,876..5,872,889
    bound_moiety=pan-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-19
    2R:5,865,220..5,865,229
    bound_moiety=Kr-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-2
    2R:5,873,122..5,873,150
    evidence=experimental
    bound_moiety=Med-XP
    protein binding site
    eve-protein_bind-20
    2R:5,865,513..5,865,522
    bound_moiety=Kr-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-21
    2R:5,865,374..5,865,399
    bound_moiety=gt-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-22
    2R:5,863,179..5,863,187
    bound_moiety=hb-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-23
    2R:5,872,994..5,873,004
    bound_moiety=pan-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-24
    2R:5,865,737..5,865,747
    bound_moiety=Kr-XP
    evidence=experimental
    bound_moiety=bcd-XP
    protein binding site
    eve-protein_bind-25
    2R:5,873,025..5,873,031
    bound_moiety=tin-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-26
    2R:5,865,526..5,865,534
    bound_moiety=bcd-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-27
    2R:5,861,451..5,861,474
    bound_moiety=eve-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-28
    2R:5,863,265..5,863,277
    bound_moiety=kni-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-29
    2R:5,873,024..5,873,034
    bound_moiety=pan-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-3
    2R:5,863,455..5,863,463
    bound_moiety=hb-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-30
    2R:5,873,040..5,873,053
    bound_moiety=pan-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-31
    2R:5,865,788..5,865,797
    bound_moiety=Kr-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-32
    2R:5,866,812..5,866,825
    evidence=experimental
    protein binding site
    eve-protein_bind-33
    2R:5,866,601..5,866,621
    bound_moiety=ttk-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-34
    2R:5,873,162..5,873,174
    bound_moiety=Med-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-35
    2R:5,865,543..5,865,552
    bound_moiety=Kr-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-36
    2R:5,865,437..5,865,481
    bound_moiety=gt-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-37
    2R:5,873,172..5,873,183
    bound_moiety=zfh1-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-38
    2R:5,863,351..5,863,361
    bound_moiety=hb-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-39
    2R:5,866,683..5,866,709
    bound_moiety=prd-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-4
    2R:5,865,354..5,865,362
    bound_moiety=bcd-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-40
    2R:5,865,304..5,865,314
    bound_moiety=Kr-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-41
    2R:5,873,208..5,873,214
    bound_moiety=tin-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-42
    2R:5,863,084..5,863,098
    bound_moiety=kni-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-43
    2R:5,863,107..5,863,121
    bound_moiety=kni-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-44
    2R:5,861,482..5,861,518
    bound_moiety=eve-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-45
    2R:5,865,618..5,865,638
    bound_moiety=Kr-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-46
    2R:5,865,794..5,865,803
    evidence=experimental
    bound_moiety=hb-XP
    protein binding site
    eve-protein_bind-47
    2R:5,872,977..5,872,991
    bound_moiety=Med-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-48
    2R:5,873,192..5,873,207
    bound_moiety=pan-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-49
    2R:5,866,477..5,866,488
    evidence=experimental
    protein binding site
    eve-protein_bind-5
    2R:5,863,319..5,863,328
    bound_moiety=hb-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-50
    2R:5,866,610..5,866,642
    bound_moiety=prd-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-51
    2R:5,866,672..5,866,686
    evidence=experimental
    protein binding site
    eve-protein_bind-52
    2R:5,865,375..5,865,383
    bound_moiety=bcd-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-53
    2R:5,865,831..5,865,841
    bound_moiety=Kr-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-54
    2R:5,865,269..5,865,277
    bound_moiety=Kr-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-55
    2R:5,863,310..5,863,320
    bound_moiety=kni-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-56
    2R:5,866,546..5,866,578
    bound_moiety=ttk-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-57
    2R:5,873,217..5,873,230
    bound_moiety=pan-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-58
    2R:5,865,619..5,865,627
    bound_moiety=bcd-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-59
    2R:5,866,627..5,866,659
    bound_moiety=eve-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-6
    2R:5,866,777..5,866,790
    evidence=experimental
    protein binding site
    eve-protein_bind-60
    2R:5,866,429..5,866,447
    evidence=experimental
    protein binding site
    eve-protein_bind-61
    2R:5,865,502..5,865,510
    bound_moiety=Kr-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-62
    2R:5,866,500..5,866,529
    evidence=experimental
    protein binding site
    eve-protein_bind-63
    2R:5,865,646..5,865,691
    bound_moiety=Kr-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-64
    2R:5,873,281..5,873,293
    bound_moiety=pan-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-65
    2R:5,865,476..5,865,484
    bound_moiety=Kr-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-66
    2R:5,863,130..5,863,139
    bound_moiety=hb-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-67
    2R:5,865,877..5,865,886
    bound_moiety=hb-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-68
    2R:5,872,919..5,872,930
    bound_moiety=Med-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-69
    2R:5,866,638..5,866,666
    evidence=experimental
    protein binding site
    eve-protein_bind-7
    2R:5,861,551..5,861,579
    protein binding site
    eve-protein_bind-70
    2R:5,861,523..5,861,535
    bound_moiety=ttk-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-71
    2R:5,863,040..5,863,053
    bound_moiety=kni-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-72
    2R:5,865,355..5,865,364
    bound_moiety=Kr-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-73
    2R:5,865,712..5,865,721
    bound_moiety=hb-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-74
    2R:5,866,703..5,866,727
    evidence=experimental
    protein binding site
    eve-protein_bind-75
    2R:5,866,856..5,866,880
    evidence=experimental
    protein binding site
    eve-protein_bind-76
    2R:5,872,949..5,872,961
    bound_moiety=Med-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-77
    2R:5,861,474..5,861,484
    protein binding site
    eve-protein_bind-8
    2R:5,873,042..5,873,048
    bound_moiety=tin-XP
    evidence=experimental
    protein binding site
    eve-protein_bind-9
    2R:5,863,503..5,863,512
    bound_moiety=hb-XP
    evidence=experimental
    sequence variant
    comment=Deletion starting from the first base of codon 255 and ending at the second base of codon 326, resulting in deletion and frameshift mutations from amino acids 255 to 376 (the C-terminus of wild-type eve). Position of mutation on reference sequence inferred by FlyBase curator based on author statement.
    evidence=experimental
    hide External Data
    Linkouts
    DEDB - Drosophila exon database: splicing graphs
    Crossreferences
    EPD - Eukarytoic Promoter Database, an annotated collection of POL II promoters
    hide Expression Data
    FlyBase-Curated Data
    Transcript and
    Protein data
    Please see the FlyBase Gene Expression Report for details of gene expression from the literature.
    hide Summary of Transcript Expression
    Stage
    Tissue/Position
    Reference
     embryonic stage | stage 4-12
     parasegement 1,3,5,7,9,11,13
     embryonic stage | stage 1-15
     larval stage
     embryonic stage | stage 1-17
     embryonic stage | stage 3
     embryonic stage | stage >12
     parasegement 1-14
     embryonic stage | stage >12
     ganglion mother cell | segmentally repeated
    Marker for
      Subcellular Localization
      CV Term
      hide Summary of Polypeptide Expression
      Stage
      Tissue/Position
      Reference
       embryonic stage | stage 13
       embryonic pericardial cell | subset
       embryonic stage | stage 8-12
       parasegment 1-14
       embryonic stage | blastoderm
       embryonic stage | stage 4-5
       embryonic stage | stage >12
       neurogenic region
       embryonic stage | stage 13
       abdominal dorsal acute muscle 1
       embryonic stage | stage 12
       proctodeum | presumptive
       embryonic stage
       cardioblast
       embryonic stage | stage 3-11
       parasegment 1,3,5,7,9,11,13
      Marker for
      Subcellular Localization
      CV Term
      hide External Data & Images
      Linkouts
      FLIGHT - Cell culture data for RNAi and other high-throughput technologies
      FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
      GEO (NCBI) - Gene expression data: microarray and other high-throughput technologies
      FlyExpress - Embryonic expression images (BDGP data)
      hide Alleles & Phenotypes
      hide Summary of Allele Phenotypes
      Lethality
      Allele
      Other Phenotypes
      Allele
      Phenotype manifest in
      Allele
      larval brain & neuroblast (with eve5)
      abdominal segment 3 & somatic muscle
      abdominal segment 4 & somatic muscle
      abdominal segment 5 & somatic muscle
      abdominal anterior fascicle & abdominal segment 3
      abdominal anterior fascicle & abdominal segment 4
      abdominal anterior fascicle & abdominal segment 5