A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene Dmel\Gαi

General Information
SymbolDmel\GαiSpeciesD. melanogaster
NameG protein α i subunitAnnotation symbolCG10060
Feature typeprotein_coding_geneFlyBase IDFBgn0001104
Gene Model StatusCurrent Stock availability 13 publicly available
Also Known Asi, Giα, G-iα65A, G-ialpha65A, Gi, Gai, Galphai, G-ia65A, DGα1, Gαι65A
Genomic Location
Chromosome (arm)3LRecombination map
Cytogenetic map65D5-65D5Sequence location3L:6,965,850..6,973,144 [-]

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Automatically generated summary

See sections below for more information
The gene G protein α i subunit is referred to in FlyBase by the symbol Dmel\Gαi (CG10060, FBgn0001104). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: protein binding; DNA binding. There is experimental evidence that it is involved in the biological process: asymmetric protein localization involved in cell fate determination; asymmetric neuroblast division; establishment of spindle orientation; establishment of glial blood-brain barrier; cortical actin cytoskeleton organization; septate junction assembly; regulation of protein localization; asymmetric cell division; ventral cord development. 33 alleles are reported. The phenotypes of these alleles are annotated with: RP2 motor neuron; neuroblast; embryonic neuroblast; chaeta; medial triple row; RP2sib neuron; EL neuron. It has one annotated transcript and one annotated polypeptide. Protein features are: G protein alpha subunit, helical insertion; G-protein alpha subunit, group I; Guanine nucleotide binding protein (G-protein), alpha subunit. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval central nervous system, larval trachea, adult ovary. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, adult spermathecae, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1627491_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of G-ialpha65A. Gene sequence location is 3L:6965850..6973144.

User Contributed Data
External Summaries
hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
Gα65A: G protein α subunit at 65A
Encodes a G protein α subunit displaying sequence homology to mammalian Giα that inhibits adenylate cyclase activity. The G protein is uniformly distributed in oocytes, becomes restricted to the posterior pole of the embryo during early cleavage and is lost during the blastoderm stage (Wolfgang et al., 1990).
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Description
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FB2013_03
FB2013_02
Controlled Vocabulary Terms
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
65D5-65D5  
Limits computationally determined from genome sequence between P{lacW}l(3)L4060L4060 and P{PZ}corn04202  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
65C-65C  
(determined by in situ hybridisation)  
65C-65C  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
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Please see the GBrowse view of Dmel\Gαi for information on other features GBrowse View Help
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0076898 FBtr0076935 FBtr0076899 FBtr0076934 FBpp0076608 FBpp0076644 FBpp0076643 FBti0041531 FBti0047285 FBti0066734 FBti0029435 FBti0103821 FBti0036159 FBti0039022 FBti0027272 FBti0049205 FBti0115834 FBti0104960 FBti0105887 FBti0028896 FBti0110950 FBti0056089 FBti0023370
Comments on Gene Model
Gene model reviewed during 5.40
Gene model reviewed during 5.50
Low-frequency RNA-Seq exon junction(s) not annotated.
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0076934
  2067
  355
Additional Transcript Data & Comments
Reported size (kB)
2.3, 1.7 (northern blot)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0076643  
40.6  
355  
7.73  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
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Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
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Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
Comment:maternally deposited
northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
radioisotope in situ
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
RT-PCR analysis shows that the G-iα65A transcript is expressed in the adult head, third segment of the antenna and maxillary palps.
Marker for
Subcellular Localization
CV Term
hide Polypeptide Expression
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
G-oα65A protein staining appears at stage S10B of oogenesis, in a few granules in the oocyte, and in dorsal anterior follicle cells. By stage S12, more protein is detected in the oocytes, and all follicle cells stain. The oocyte contains high levels of uniformly distributed granules at the end of oogenesis. The distribution of G-oα65A protein is uniform in embryonic cleavage stages 1-2, becomes restricted to the posterior pole by cleavage stage 4, and has disappeared by the end of the blastoderm stage. The protein reappears at stage 14 in presumptive cardioblast cells, and this staining persists into larval stages. After stage 15, chordotonal organ and ring gland precursors express G-oα65A protein. Staining is also detected in a subset of cell bodies in the ventral ganglion, and in additional CNS cells.
G-iα65A protein is expressed in the neurons and at the base and inside the olfactory sensilla of the third segment of the antenna. It co-localises with G-sα60A and Gα49B proteins.
Low levels of G-oα65A protein are detected throughout the CNS in both the cortex and neuropil. Higher levels of expression are detected at the terminations of photoreceptor cells in the lamina and medulla. Some staining is also detected in the ocellar retina and the antennal glomerulae, as well as in the proximal half of the ocellar nerve. Some expression is detected in the retina.
Marker for
Subcellular Localization (GO Cellular Component)
CV term
References
hide Expression Deduced from Reporters
hide High-Throughput Expression Data
Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
hide FlyAtlas Anatomy Microarray

FlyAtlas Anatomical Expression Data

(FlyAtlas-RNA.adult)

(FlyAtlas-RNA.larva)


   Styles
   Scales

Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval central nervous system, larval trachea, adult ovary. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, adult spermathecae, larval/adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (>999.999)

Linear, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 706.325
Larval Midgut
 
 438.1
Larval Hindgut
 
 390.2
Larval Malpighian Tubules
 
 271.5
Larval Fat Body
 
 133.9
Larval Salivary Gland
 
 278.4
Larval Trachea
 
 508.475
Larval Carcass
 
 283.1
Adult Head
 
 251.1
Adult Eye
 
 215.775
Adult Brain
 
 221.2
Adult Thoracic-Abdominal Ganglion
 
 333.7
Adult Crop
 
 366.5
Adult Midgut
 
 460.5
Adult Hindgut
 
 219
Adult Malpighian Tubules
 
 204.4
Adult Fat Body
 
 232.9
Adult Salivary Gland
 
 358
Adult Heart
 
 169.125
Adult VirginFemale Spermatheca
 
 361.8
Adult InseminatedFemale Spermatheca
 
 354.4
Adult Ovary
 
 1092.2
Adult Testis
 
 64.1
Adult Male Accessory Gland
 
 67.6
Adult Carcass
 
 156.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (706.325)
Larval Midgut
 
 438.1
Larval Hindgut
 
 390.2
Larval Malpighian Tubules
 
 271.5
Larval Fat Body
 
 133.9
Larval Salivary Gland
 
 278.4
Larval Trachea
 508.475
Larval Carcass
 
 283.1
Adult Head
 
 251.1
Adult Eye
 
 215.775
Adult Brain
 
 221.2
Adult Thoracic-Abdominal Ganglion
 
 333.7
Adult Crop
 
 366.5
Adult Midgut
 
 460.5
Adult Hindgut
 
 219
Adult Malpighian Tubules
 
 204.4
Adult Fat Body
 
 232.9
Adult Salivary Gland
 
 358
Adult Heart
 
 169.125
Adult VirginFemale Spermatheca
 
 361.8
Adult InseminatedFemale Spermatheca
 
 354.4
Adult Ovary
 (1092.2)
Adult Testis
 
 64.1
Adult Male Accessory Gland
 
 67.6
Adult Carcass
 
 156.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 706.325
Larval Midgut
 
 438.1
Larval Hindgut
 
 390.2
Larval Malpighian Tubules
 
 271.5
Larval Fat Body
 
 133.9
Larval Salivary Gland
 
 278.4
Larval Trachea
 
 508.475
Larval Carcass
 
 283.1
Adult Head
 
 251.1
Adult Eye
 
 215.775
Adult Brain
 
 221.2
Adult Thoracic-Abdominal Ganglion
 
 333.7
Adult Crop
 
 366.5
Adult Midgut
 
 460.5
Adult Hindgut
 
 219
Adult Malpighian Tubules
 
 204.4
Adult Fat Body
 
 232.9
Adult Salivary Gland
 
 358
Adult Heart
 
 169.125
Adult VirginFemale Spermatheca
 
 361.8
Adult InseminatedFemale Spermatheca
 
 354.4
Adult Ovary
 (1092.2)
Adult Testis
 
 64.1
Adult Male Accessory Gland
 
 67.6
Adult Carcass
 
 156.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 706.325
Larval Midgut
 
 438.1
Larval Hindgut
 
 390.2
Larval Malpighian Tubules
 
 271.5
Larval Fat Body
 
 133.9
Larval Salivary Gland
 
 278.4
Larval Trachea
 
 508.475
Larval Carcass
 
 283.1
Adult Head
 
 251.1
Adult Eye
 
 215.775
Adult Brain
 
 221.2
Adult Thoracic-Abdominal Ganglion
 
 333.7
Adult Crop
 
 366.5
Adult Midgut
 
 460.5
Adult Hindgut
 
 219
Adult Malpighian Tubules
 
 204.4
Adult Fat Body
 
 232.9
Adult Salivary Gland
 
 358
Adult Heart
 
 169.125
Adult VirginFemale Spermatheca
 
 361.8
Adult InseminatedFemale Spermatheca
 
 354.4
Adult Ovary
 
 1092.2
Adult Testis
 
 64.1
Adult Male Accessory Gland
 
 67.6
Adult Carcass
 
 156.2
Expression Level Scale
 Very high 
log, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 706.325
Larval Midgut
 
 438.1
Larval Hindgut
 
 390.2
Larval Malpighian Tubules
 
 271.5
Larval Fat Body
 
 133.9
Larval Salivary Gland
 
 278.4
Larval Trachea
 
 508.475
Larval Carcass
 
 283.1
Adult Head
 
 251.1
Adult Eye
 
 215.775
Adult Brain
 
 221.2
Adult Thoracic-Abdominal Ganglion
 
 333.7
Adult Crop
 
 366.5
Adult Midgut
 
 460.5
Adult Hindgut
 
 219
Adult Malpighian Tubules
 
 204.4
Adult Fat Body
 
 232.9
Adult Salivary Gland
 
 358
Adult Heart
 
 169.125
Adult VirginFemale Spermatheca
 
 361.8
Adult InseminatedFemale Spermatheca
 
 354.4
Adult Ovary
 
 1092.2
Adult Testis
 
 64.1
Adult Male Accessory Gland
 
 67.6
Adult Carcass
 
 156.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 706.325
Larval Midgut
 
 438.1
Larval Hindgut
 
 390.2
Larval Malpighian Tubules
 
 271.5
Larval Fat Body
 
 133.9
Larval Salivary Gland
 
 278.4
Larval Trachea
 508.475
Larval Carcass
 
 283.1
Adult Head
 
 251.1
Adult Eye
 
 215.775
Adult Brain
 
 221.2
Adult Thoracic-Abdominal Ganglion
 
 333.7
Adult Crop
 
 366.5
Adult Midgut
 
 460.5
Adult Hindgut
 
 219
Adult Malpighian Tubules
 
 204.4
Adult Fat Body
 
 232.9
Adult Salivary Gland
 
 358
Adult Heart
 
 169.125
Adult VirginFemale Spermatheca
 
 361.8
Adult InseminatedFemale Spermatheca
 
 354.4
Adult Ovary
 (1092.2)
Adult Testis
 
 64.1
Adult Male Accessory Gland
 
 67.6
Adult Carcass
 
 156.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 706.325
Larval Midgut
 
 438.1
Larval Hindgut
 
 390.2
Larval Malpighian Tubules
 
 271.5
Larval Fat Body
 
 133.9
Larval Salivary Gland
 
 278.4
Larval Trachea
 
 508.475
Larval Carcass
 
 283.1
Adult Head
 
 251.1
Adult Eye
 
 215.775
Adult Brain
 
 221.2
Adult Thoracic-Abdominal Ganglion
 
 333.7
Adult Crop
 
 366.5
Adult Midgut
 
 460.5
Adult Hindgut
 
 219
Adult Malpighian Tubules
 
 204.4
Adult Fat Body
 
 232.9
Adult Salivary Gland
 
 358
Adult Heart
 
 169.125
Adult VirginFemale Spermatheca
 
 361.8
Adult InseminatedFemale Spermatheca
 
 354.4
Adult Ovary
 1092.2
Adult Testis
 
 64.1
Adult Male Accessory Gland
 
 67.6
Adult Carcass
 
 156.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 706.325
Larval Midgut
 
 438.1
Larval Hindgut
 
 390.2
Larval Malpighian Tubules
 
 271.5
Larval Fat Body
 
 133.9
Larval Salivary Gland
 
 278.4
Larval Trachea
 
 508.475
Larval Carcass
 
 283.1
Adult Head
 
 251.1
Adult Eye
 
 215.775
Adult Brain
 
 221.2
Adult Thoracic-Abdominal Ganglion
 
 333.7
Adult Crop
 
 366.5
Adult Midgut
 
 460.5
Adult Hindgut
 
 219
Adult Malpighian Tubules
 
 204.4
Adult Fat Body
 
 232.9
Adult Salivary Gland
 
 358
Adult Heart
 
 169.125
Adult VirginFemale Spermatheca
 
 361.8
Adult InseminatedFemale Spermatheca
 
 354.4
Adult Ovary
 
 1092.2
Adult Testis
 
 64.1
Adult Male Accessory Gland
 
 67.6
Adult Carcass
 
 156.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 251.1
 
NA 
Eye
 
 215.775
 
NA 
Brain
 
 221.2
 
706.325 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 333.7
 
NA 
Crop
 
 366.5
 
438.1 
Midgut
 
 460.5
 
390.2 
Hindgut
 
 219
 
271.5 
Malpighian Tubules
 
 204.4
 
133.9 
Fat Body
 
 232.9
 
278.4 
Salivary Gland
 
 358
 
NA 
Heart
 
 169.125
 
508.475 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 361.8
 
NA 
InseminatedFemale Spermatheca
 
 354.4
 
NA 
Ovary
 
 1092.2
 
NA 
Testis
 
 64.1
 
NA 
Male Accessory Gland
 
 67.6
 
283.1 
Carcass
 
 156.2

FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 37
central nervous system, larvae L3
 
 34
central nervous system, pupae P8
 
 16
head, virgin 1-day female
 
 7
head, virgin 4-day female
 
 6
head, virgin 20-day female
 
 8
head, mated 1-day female
 
 6
head, mated 4-day female
 
 7
head, mated 20-day female
 
 9
head, mated 1-day male
 
 11
head, mated 4-day male
 
 11
head, mated 20-day male
 
 14
salivary gland, larvae L3 wandering
 
 5
salivary gland, white prepupae
 
 14
digestive system, larvae L3 wandering
 
 28
digestive system, 1-day adult
 
 20
digestive system, 4-day adult
 
 20
digestive system, 20-day adult
 
 23
fat body, larvae L3 wandering
 
 2
fat body, white prepupae
 
 55
fat body, pupae P8
 
 8
carcass, larvae L3 wandering
 
 30
carcass, 1-day adult
 
 8
carcass, 4-day adult
 
 9
carcass, 20-day adult
 
 10
ovary, virgin 4-day female
 
 102
ovary, mated 4-day female
 
 64
testis, mated 4-day male
 
 7
accessory gland, mated 4-day male
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 (37)
central nervous system, larvae L3
 (34)
central nervous system, pupae P8
 
 16
head, virgin 1-day female
 
 7
head, virgin 4-day female
 
 6
head, virgin 20-day female
 
 8
head, mated 1-day female
 
 6
head, mated 4-day female
 
 7
head, mated 20-day female
 
 9
head, mated 1-day male
 
 11
head, mated 4-day male
 
 11
head, mated 20-day male
 
 14
salivary gland, larvae L3 wandering
 
 5
salivary gland, white prepupae
 
 14
digestive system, larvae L3 wandering
 (28)
digestive system, 1-day adult
 
 20
digestive system, 4-day adult
 
 20
digestive system, 20-day adult
 
 23
fat body, larvae L3 wandering
 
 2
fat body, white prepupae
 (55)
fat body, pupae P8
 
 8
carcass, larvae L3 wandering
 (30)
carcass, 1-day adult
 
 8
carcass, 4-day adult
 
 9
carcass, 20-day adult
 
 10
ovary, virgin 4-day female
 (102)
ovary, mated 4-day female
 (64)
testis, mated 4-day male
 
 7
accessory gland, mated 4-day male
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 37
central nervous system, larvae L3
 
 34
central nervous system, pupae P8
 
 16
head, virgin 1-day female
 
 7
head, virgin 4-day female
 
 6
head, virgin 20-day female
 
 8
head, mated 1-day female
 
 6
head, mated 4-day female
 
 7
head, mated 20-day female
 
 9
head, mated 1-day male
 
 11
head, mated 4-day male
 
 11
head, mated 20-day male
 
 14
salivary gland, larvae L3 wandering
 
 5
salivary gland, white prepupae
 
 14
digestive system, larvae L3 wandering
 
 28
digestive system, 1-day adult
 
 20
digestive system, 4-day adult
 
 20
digestive system, 20-day adult
 
 23
fat body, larvae L3 wandering
 
 2
fat body, white prepupae
 
 55
fat body, pupae P8
 
 8
carcass, larvae L3 wandering
 
 30
carcass, 1-day adult
 
 8
carcass, 4-day adult
 
 9
carcass, 20-day adult
 
 10
ovary, virgin 4-day female
 102
ovary, mated 4-day female
 
 64
testis, mated 4-day male
 
 7
accessory gland, mated 4-day male
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 37
central nervous system, larvae L3
 
 34
central nervous system, pupae P8
 
 16
head, virgin 1-day female
 
 7
head, virgin 4-day female
 
 6
head, virgin 20-day female
 
 8
head, mated 1-day female
 
 6
head, mated 4-day female
 
 7
head, mated 20-day female
 
 9
head, mated 1-day male
 
 11
head, mated 4-day male
 
 11
head, mated 20-day male
 
 14
salivary gland, larvae L3 wandering
 
 5
salivary gland, white prepupae
 
 14
digestive system, larvae L3 wandering
 
 28
digestive system, 1-day adult
 
 20
digestive system, 4-day adult
 
 20
digestive system, 20-day adult
 
 23
fat body, larvae L3 wandering
 
 2
fat body, white prepupae
 
 55
fat body, pupae P8
 
 8
carcass, larvae L3 wandering
 
 30
carcass, 1-day adult
 
 8
carcass, 4-day adult
 
 9
carcass, 20-day adult
 
 10
ovary, virgin 4-day female
 
 102
ovary, mated 4-day female
 
 64
testis, mated 4-day male
 
 7
accessory gland, mated 4-day male
 
 5
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 37
central nervous system, larvae L3
 
 34
central nervous system, pupae P8
 
 16
head, virgin 1-day female
 
 7
head, virgin 4-day female
 
 6
head, virgin 20-day female
 
 8
head, mated 1-day female
 
 6
head, mated 4-day female
 
 7
head, mated 20-day female
 
 9
head, mated 1-day male
 
 11
head, mated 4-day male
 
 11
head, mated 20-day male
 
 14
salivary gland, larvae L3 wandering
 
 5
salivary gland, white prepupae
 
 14
digestive system, larvae L3 wandering
 
 28
digestive system, 1-day adult
 
 20
digestive system, 4-day adult
 
 20
digestive system, 20-day adult
 
 23
fat body, larvae L3 wandering
 
 2
fat body, white prepupae
 
 55
fat body, pupae P8
 
 8
carcass, larvae L3 wandering
 
 30
carcass, 1-day adult
 
 8
carcass, 4-day adult
 
 9
carcass, 20-day adult
 
 10
ovary, virgin 4-day female
 
 102
ovary, mated 4-day female
 
 64
testis, mated 4-day male
 
 7
accessory gland, mated 4-day male
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 (37)
central nervous system, larvae L3
 (34)
central nervous system, pupae P8
 
 16
head, virgin 1-day female
 
 7
head, virgin 4-day female
 
 6
head, virgin 20-day female
 
 8
head, mated 1-day female
 
 6
head, mated 4-day female
 
 7
head, mated 20-day female
 
 9
head, mated 1-day male
 
 11
head, mated 4-day male
 
 11
head, mated 20-day male
 
 14
salivary gland, larvae L3 wandering
 
 5
salivary gland, white prepupae
 
 14
digestive system, larvae L3 wandering
 28
digestive system, 1-day adult
 
 20
digestive system, 4-day adult
 
 20
digestive system, 20-day adult
 
 23
fat body, larvae L3 wandering
 
 2
fat body, white prepupae
 (55)
fat body, pupae P8
 
 8
carcass, larvae L3 wandering
 30
carcass, 1-day adult
 
 8
carcass, 4-day adult
 
 9
carcass, 20-day adult
 
 10
ovary, virgin 4-day female
 (102)
ovary, mated 4-day female
 (64)
testis, mated 4-day male
 
 7
accessory gland, mated 4-day male
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 37
central nervous system, larvae L3
 
 34
central nervous system, pupae P8
 
 16
head, virgin 1-day female
 
 7
head, virgin 4-day female
 
 6
head, virgin 20-day female
 
 8
head, mated 1-day female
 
 6
head, mated 4-day female
 
 7
head, mated 20-day female
 
 9
head, mated 1-day male
 
 11
head, mated 4-day male
 
 11
head, mated 20-day male
 
 14
salivary gland, larvae L3 wandering
 
 5
salivary gland, white prepupae
 
 14
digestive system, larvae L3 wandering
 
 28
digestive system, 1-day adult
 
 20
digestive system, 4-day adult
 
 20
digestive system, 20-day adult
 
 23
fat body, larvae L3 wandering
 
 2
fat body, white prepupae
 
 55
fat body, pupae P8
 
 8
carcass, larvae L3 wandering
 
 30
carcass, 1-day adult
 
 8
carcass, 4-day adult
 
 9
carcass, 20-day adult
 
 10
ovary, virgin 4-day female
 102
ovary, mated 4-day female
 
 64
testis, mated 4-day male
 
 7
accessory gland, mated 4-day male
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 37
central nervous system, larvae L3
 
 34
central nervous system, pupae P8
 
 16
head, virgin 1-day female
 
 7
head, virgin 4-day female
 
 6
head, virgin 20-day female
 
 8
head, mated 1-day female
 
 6
head, mated 4-day female
 
 7
head, mated 20-day female
 
 9
head, mated 1-day male
 
 11
head, mated 4-day male
 
 11
head, mated 20-day male
 
 14
salivary gland, larvae L3 wandering
 
 5
salivary gland, white prepupae
 
 14
digestive system, larvae L3 wandering
 
 28
digestive system, 1-day adult
 
 20
digestive system, 4-day adult
 
 20
digestive system, 20-day adult
 
 23
fat body, larvae L3 wandering
 
 2
fat body, white prepupae
 
 55
fat body, pupae P8
 
 8
carcass, larvae L3 wandering
 
 30
carcass, 1-day adult
 
 8
carcass, 4-day adult
 
 9
carcass, 20-day adult
 
 10
ovary, virgin 4-day female
 
 102
ovary, mated 4-day female
 
 64
testis, mated 4-day male
 
 7
accessory gland, mated 4-day male
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 
central nervous system, larvae L3
 
 
central nervous system, pupae P8
 
 
head, virgin 1-day female
 
 
head, virgin 4-day female
 
 
head, virgin 20-day female
 
 
head, mated 1-day female
 
 
head, mated 4-day female
 
 
head, mated 20-day female
 
 
head, mated 1-day male
 
 
head, mated 4-day male
 
 
head, mated 20-day male
 
 
salivary gland, larvae L3 wandering
 
 
salivary gland, white prepupae
 
 
digestive system, larvae L3 wandering
 
 
digestive system, 1-day adult
 
 
digestive system, 4-day adult
 
 
digestive system, 20-day adult
 
 
fat body, larvae L3 wandering
 
 
fat body, white prepupae
 
 
fat body, pupae P8
 
 
carcass, larvae L3 wandering
 
 
carcass, 1-day adult
 
 
carcass, 4-day adult
 
 
carcass, 20-day adult
 
 
ovary, virgin 4-day female
 
 
ovary, mated 4-day female
 
 
testis, mated 4-day male
 
 
accessory gland, mated 4-day male
 
 

hide modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)


   Styles
   Scales

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 162
embryo 02-04hr
 
 261
embryo 04-06hr
 
 236
embryo 06-08hr
 
 227
embryo 08-10hr
 
 186
embryo 10-12hr
 
 137
embryo 12-14hr
 
 107
embryo 14-16hr
 
 77
embryo 16-18hr
 
 71
embryo 18-20hr
 
 41
embryo 20-22hr
 
 64
embryo 22-24hr
 
 69
larva L1
 
 21
larva L2
 
 25
larva L3 12hr old
 
 19
larva L3 puffstage 1-2
 
 25
larva L3 puffstage 3-6
 
 36
larva L3 puffstage 7-9
 
 60
white prepupae new
 
 80
white prepupae 12hr
 
 60
white prepupae 24hr
 
 60
pupae 2d postWPP
 
 43
pupae 3d postWPP
 
 25
pupae 4d postWPP
 
 19
adult male 01day
 
 15
adult male 05day
 
 13
adult male 30day
 
 13
adult female 01day
 
 44
adult female 05day
 
 85
adult female 30day
 
 84
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (162)
embryo 02-04hr
 (261)
embryo 04-06hr
 (236)
embryo 06-08hr
 (227)
embryo 08-10hr
 (186)
embryo 10-12hr
 (137)
embryo 12-14hr
 (107)
embryo 14-16hr
 (77)
embryo 16-18hr
 (71)
embryo 18-20hr
 (41)
embryo 20-22hr
 (64)
embryo 22-24hr
 (69)
larva L1
 
 21
larva L2
 
 25
larva L3 12hr old
 
 19
larva L3 puffstage 1-2
 
 25
larva L3 puffstage 3-6
 (36)
larva L3 puffstage 7-9
 (60)
white prepupae new
 (80)
white prepupae 12hr
 (60)
white prepupae 24hr
 (60)
pupae 2d postWPP
 (43)
pupae 3d postWPP
 
 25
pupae 4d postWPP
 
 19
adult male 01day
 
 15
adult male 05day
 
 13
adult male 30day
 
 13
adult female 01day
 (44)
adult female 05day
 (85)
adult female 30day
 (84)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 (162)
embryo 02-04hr
 (261)
embryo 04-06hr
 (236)
embryo 06-08hr
 (227)
embryo 08-10hr
 (186)
embryo 10-12hr
 (137)
embryo 12-14hr
 107
embryo 14-16hr
 
 77
embryo 16-18hr
 
 71
embryo 18-20hr
 
 41
embryo 20-22hr
 
 64
embryo 22-24hr
 
 69
larva L1
 
 21
larva L2
 
 25
larva L3 12hr old
 
 19
larva L3 puffstage 1-2
 
 25
larva L3 puffstage 3-6
 
 36
larva L3 puffstage 7-9
 
 60
white prepupae new
 
 80
white prepupae 12hr
 
 60
white prepupae 24hr
 
 60
pupae 2d postWPP
 
 43
pupae 3d postWPP
 
 25
pupae 4d postWPP
 
 19
adult male 01day
 
 15
adult male 05day
 
 13
adult male 30day
 
 13
adult female 01day
 
 44
adult female 05day
 
 85
adult female 30day
 
 84
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 162
embryo 02-04hr
 
 261
embryo 04-06hr
 
 236
embryo 06-08hr
 
 227
embryo 08-10hr
 
 186
embryo 10-12hr
 
 137
embryo 12-14hr
 
 107
embryo 14-16hr
 
 77
embryo 16-18hr
 
 71
embryo 18-20hr
 
 41
embryo 20-22hr
 
 64
embryo 22-24hr
 
 69
larva L1
 
 21
larva L2
 
 25
larva L3 12hr old
 
 19
larva L3 puffstage 1-2
 
 25
larva L3 puffstage 3-6
 
 36
larva L3 puffstage 7-9
 
 60
white prepupae new
 
 80
white prepupae 12hr
 
 60
white prepupae 24hr
 
 60
pupae 2d postWPP
 
 43
pupae 3d postWPP
 
 25
pupae 4d postWPP
 
 19
adult male 01day
 
 15
adult male 05day
 
 13
adult male 30day
 
 13
adult female 01day
 
 44
adult female 05day
 
 85
adult female 30day
 
 84
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 162
embryo 02-04hr
 
 261
embryo 04-06hr
 
 236
embryo 06-08hr
 
 227
embryo 08-10hr
 
 186
embryo 10-12hr
 
 137
embryo 12-14hr
 
 107
embryo 14-16hr
 
 77
embryo 16-18hr
 
 71
embryo 18-20hr
 
 41
embryo 20-22hr
 
 64
embryo 22-24hr
 
 69
larva L1
 
 21
larva L2
 
 25
larva L3 12hr old
 
 19
larva L3 puffstage 1-2
 
 25
larva L3 puffstage 3-6
 
 36
larva L3 puffstage 7-9
 
 60
white prepupae new
 
 80
white prepupae 12hr
 
 60
white prepupae 24hr
 
 60
pupae 2d postWPP
 
 43
pupae 3d postWPP
 
 25
pupae 4d postWPP
 
 19
adult male 01day
 
 15
adult male 05day
 
 13
adult male 30day
 
 13
adult female 01day
 
 44
adult female 05day
 
 85
adult female 30day
 
 84
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (162)
embryo 02-04hr
 (261)
embryo 04-06hr
 (236)
embryo 06-08hr
 (227)
embryo 08-10hr
 (186)
embryo 10-12hr
 (137)
embryo 12-14hr
 (107)
embryo 14-16hr
 (77)
embryo 16-18hr
 (71)
embryo 18-20hr
 (41)
embryo 20-22hr
 (64)
embryo 22-24hr
 (69)
larva L1
 
 21
larva L2
 
 25
larva L3 12hr old
 
 19
larva L3 puffstage 1-2
 
 25
larva L3 puffstage 3-6
 (36)
larva L3 puffstage 7-9
 (60)
white prepupae new
 (80)
white prepupae 12hr
 (60)
white prepupae 24hr
 (60)
pupae 2d postWPP
 (43)
pupae 3d postWPP
 
 25
pupae 4d postWPP
 
 19
adult male 01day
 
 15
adult male 05day
 
 13
adult male 30day
 
 13
adult female 01day
 (44)
adult female 05day
 (85)
adult female 30day
 (84)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 (162)
embryo 02-04hr
 (261)
embryo 04-06hr
 (236)
embryo 06-08hr
 (227)
embryo 08-10hr
 (186)
embryo 10-12hr
 137
embryo 12-14hr
 107
embryo 14-16hr
 
 77
embryo 16-18hr
 
 71
embryo 18-20hr
 
 41
embryo 20-22hr
 
 64
embryo 22-24hr
 
 69
larva L1
 
 21
larva L2
 
 25
larva L3 12hr old
 
 19
larva L3 puffstage 1-2
 
 25
larva L3 puffstage 3-6
 
 36
larva L3 puffstage 7-9
 
 60
white prepupae new
 
 80
white prepupae 12hr
 
 60
white prepupae 24hr
 
 60
pupae 2d postWPP
 
 43
pupae 3d postWPP
 
 25
pupae 4d postWPP
 
 19
adult male 01day
 
 15
adult male 05day
 
 13
adult male 30day
 
 13
adult female 01day
 
 44
adult female 05day
 
 85
adult female 30day
 
 84
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 162
embryo 02-04hr
 
 261
embryo 04-06hr
 
 236
embryo 06-08hr
 
 227
embryo 08-10hr
 
 186
embryo 10-12hr
 
 137
embryo 12-14hr
 
 107
embryo 14-16hr
 
 77
embryo 16-18hr
 
 71
embryo 18-20hr
 
 41
embryo 20-22hr
 
 64
embryo 22-24hr
 
 69
larva L1
 
 21
larva L2
 
 25
larva L3 12hr old
 
 19
larva L3 puffstage 1-2
 
 25
larva L3 puffstage 3-6
 
 36
larva L3 puffstage 7-9
 
 60
white prepupae new
 
 80
white prepupae 12hr
 
 60
white prepupae 24hr
 
 60
pupae 2d postWPP
 
 43
pupae 3d postWPP
 
 25
pupae 4d postWPP
 
 19
adult male 01day
 
 15
adult male 05day
 
 13
adult male 30day
 
 13
adult female 01day
 
 44
adult female 05day
 
 85
adult female 30day
 
 84
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

modENCODE Temporal Expression Data (Graveley et al., 2011)
hide modENCODE Cell Lines RNA-Seq

modENCODE Cell Line Expression Data

(modENCODE_mRNA-Seq_cell.A)

(modENCODE_mRNA-Seq_cell.B)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 306
Schneider line 2 Sg4
 
 60
embryonic 1182-4H
 
 63
embryonic GM2
 
 68
embryonic Kc167
 
 48
embryonic S1
 
 60
embryonic S3
 
 51
leg disc CME L1
 
 46
wing disc CME-W2
 
 57
wing disc ML-DmD8
 
 53
wing disc ML-DmD9
 
 44
wing disc ML-DmD16-c3
 
 46
wing disc ML-DmD21
 
 44
wing disc ML-DmD32
 
 36
haltere disc ML-DmD17-c3
 
 65
eye-antennal disc ML-DmD11
 
 32
antennal disc ML-DmD20-c5
 
 46
mixed discs ML-DmD4-c1
 
 126
CNS ML-DmBG1-c1
 
 64
CNS ML-DmBG2-c2
 
 64
tumorous blood cells mbn2
 
 452
ovary fGS/OSS
 
 40
ovary OSC
 
 46
ovary OSS
 
 30
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 (306)
Schneider line 2 Sg4
 (60)
embryonic 1182-4H
 (63)
embryonic GM2
 (68)
embryonic Kc167
 (48)
embryonic S1
 (60)
embryonic S3
 (51)
leg disc CME L1
 (46)
wing disc CME-W2
 (57)
wing disc ML-DmD8
 (53)
wing disc ML-DmD9
 (44)
wing disc ML-DmD16-c3
 (46)
wing disc ML-DmD21
 (44)
wing disc ML-DmD32
 (36)
haltere disc ML-DmD17-c3
 (65)
eye-antennal disc ML-DmD11
 (32)
antennal disc ML-DmD20-c5
 (46)
mixed discs ML-DmD4-c1
 (126)
CNS ML-DmBG1-c1
 (64)
CNS ML-DmBG2-c2
 (64)
tumorous blood cells mbn2
 (452)
ovary fGS/OSS
 (40)
ovary OSC
 (46)
ovary OSS
 (30)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 (306)
Schneider line 2 Sg4
 
 60
embryonic 1182-4H
 
 63
embryonic GM2
 
 68
embryonic Kc167
 
 48
embryonic S1
 
 60
embryonic S3
 
 51
leg disc CME L1
 
 46
wing disc CME-W2
 
 57
wing disc ML-DmD8
 
 53
wing disc ML-DmD9
 
 44
wing disc ML-DmD16-c3
 
 46
wing disc ML-DmD21
 
 44
wing disc ML-DmD32
 
 36
haltere disc ML-DmD17-c3
 
 65
eye-antennal disc ML-DmD11
 
 32
antennal disc ML-DmD20-c5
 
 46
mixed discs ML-DmD4-c1
 (126)
CNS ML-DmBG1-c1
 
 64
CNS ML-DmBG2-c2
 
 64
tumorous blood cells mbn2
 (452)
ovary fGS/OSS
 
 40
ovary OSC
 
 46
ovary OSS
 
 30
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 306
Schneider line 2 Sg4
 
 60
embryonic 1182-4H
 
 63
embryonic GM2
 
 68
embryonic Kc167
 
 48
embryonic S1
 
 60
embryonic S3
 
 51
leg disc CME L1
 
 46
wing disc CME-W2
 
 57
wing disc ML-DmD8
 
 53
wing disc ML-DmD9
 
 44
wing disc ML-DmD16-c3
 
 46
wing disc ML-DmD21
 
 44
wing disc ML-DmD32
 
 36
haltere disc ML-DmD17-c3
 
 65
eye-antennal disc ML-DmD11
 
 32
antennal disc ML-DmD20-c5
 
 46
mixed discs ML-DmD4-c1
 
 126
CNS ML-DmBG1-c1
 
 64
CNS ML-DmBG2-c2
 
 64
tumorous blood cells mbn2
 
 452
ovary fGS/OSS
 
 40
ovary OSC
 
 46
ovary OSS
 
 30
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 306
Schneider line 2 Sg4
 
 60
embryonic 1182-4H
 
 63
embryonic GM2
 
 68
embryonic Kc167
 
 48
embryonic S1
 
 60
embryonic S3
 
 51
leg disc CME L1
 
 46
wing disc CME-W2
 
 57
wing disc ML-DmD8
 
 53
wing disc ML-DmD9
 
 44
wing disc ML-DmD16-c3
 
 46
wing disc ML-DmD21
 
 44
wing disc ML-DmD32
 
 36
haltere disc ML-DmD17-c3
 
 65
eye-antennal disc ML-DmD11
 
 32
antennal disc ML-DmD20-c5
 
 46
mixed discs ML-DmD4-c1
 
 126
CNS ML-DmBG1-c1
 
 64
CNS ML-DmBG2-c2
 
 64
tumorous blood cells mbn2
 
 452
ovary fGS/OSS
 
 40
ovary OSC
 
 46
ovary OSS
 
 30
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 (306)
Schneider line 2 Sg4
 (60)
embryonic 1182-4H
 (63)
embryonic GM2
 (68)
embryonic Kc167
 (48)
embryonic S1
 (60)
embryonic S3
 (51)
leg disc CME L1
 (46)
wing disc CME-W2
 (57)
wing disc ML-DmD8
 (53)
wing disc ML-DmD9
 (44)
wing disc ML-DmD16-c3
 (46)
wing disc ML-DmD21
 (44)
wing disc ML-DmD32
 (36)
haltere disc ML-DmD17-c3
 (65)
eye-antennal disc ML-DmD11
 32
antennal disc ML-DmD20-c5
 (46)
mixed discs ML-DmD4-c1
 (126)
CNS ML-DmBG1-c1
 (64)
CNS ML-DmBG2-c2
 (64)
tumorous blood cells mbn2
 (452)
ovary fGS/OSS
 (40)
ovary OSC
 (46)
ovary OSS
 30
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 (306)
Schneider line 2 Sg4
 
 60
embryonic 1182-4H
 
 63
embryonic GM2
 
 68
embryonic Kc167
 
 48
embryonic S1
 
 60
embryonic S3
 
 51
leg disc CME L1
 
 46
wing disc CME-W2
 
 57
wing disc ML-DmD8
 
 53
wing disc ML-DmD9
 
 44
wing disc ML-DmD16-c3
 
 46
wing disc ML-DmD21
 
 44
wing disc ML-DmD32
 
 36
haltere disc ML-DmD17-c3
 
 65
eye-antennal disc ML-DmD11
 
 32
antennal disc ML-DmD20-c5
 
 46
mixed discs ML-DmD4-c1
 126
CNS ML-DmBG1-c1
 
 64
CNS ML-DmBG2-c2
 
 64
tumorous blood cells mbn2
 (452)
ovary fGS/OSS
 
 40
ovary OSC
 
 46
ovary OSS
 
 30
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 306
Schneider line 2 Sg4
 
 60
embryonic 1182-4H
 
 63
embryonic GM2
 
 68
embryonic Kc167
 
 48
embryonic S1
 
 60
embryonic S3
 
 51
leg disc CME L1
 
 46
wing disc CME-W2
 
 57
wing disc ML-DmD8
 
 53
wing disc ML-DmD9
 
 44
wing disc ML-DmD16-c3
 
 46
wing disc ML-DmD21
 
 44
wing disc ML-DmD32
 
 36
haltere disc ML-DmD17-c3
 
 65
eye-antennal disc ML-DmD11
 
 32
antennal disc ML-DmD20-c5
 
 46
mixed discs ML-DmD4-c1
 
 126
CNS ML-DmBG1-c1
 
 64
CNS ML-DmBG2-c2
 
 64
tumorous blood cells mbn2
 
 452
ovary fGS/OSS
 
 40
ovary OSC
 
 46
ovary OSS
 
 30
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Cell Line   Expression Level
Schneider line 2 S2R+
 
 
Schneider line 2 Sg4
 
 
embryonic 1182-4H
 
 
embryonic GM2
 
 
embryonic Kc167
 
 
embryonic S1
 
 
embryonic S3
 
 
leg disc CME L1
 
 
wing disc CME-W2
 
 
wing disc ML-DmD8
 
 
wing disc ML-DmD9
 
 
wing disc ML-DmD16-c3
 
 
wing disc ML-DmD21
 
 
wing disc ML-DmD32
 
 
haltere disc ML-DmD17-c3
 
 
eye-antennal disc ML-DmD11
 
 
antennal disc ML-DmD20-c5
 
 
mixed discs ML-DmD4-c1
 
 
CNS ML-DmBG1-c1
 
 
CNS ML-DmBG2-c2
 
 
tumorous blood cells mbn2
 
 
ovary fGS/OSS
 
 
ovary OSC
 
 
ovary OSS
 
 

hide modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 16
cold shock, 4-day adult
 
 10
heat shock, 4-day adult
 
 28
Cadmium 50 mM 6 hrs, larvae L3
 
 14
Cadmium 50 mM 12 hrs, larvae L3
 
 23
Cadmium 50 mM 48 hrs, 4-day adult
 
 22
Cadmium 100 mM 48 hrs, 4-day adult
 
 50
Copper 0.5 mM 12 hrs, larvae L3
 
 7
Copper 15 mM 48 hrs, 4-day adult
 
 26
Zinc 5 mM 12 hrs, larvae L3
 
 8
Zinc 4.5 mM 48 hrs, 4-day adult
 
 14
Ethanol 2.5% 3 hrs, larvae L3
 
 50
Ethanol 5% 3 hrs, larvae L3
 
 16
Ethanol 10% 3 hrs, larvae L3
 
 13
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 11
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 44
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 17
Paraquat 5 mM 48 hrs, 4-day adult
 
 43
Paraquat 10 mM 48 hrs, 4-day adult
 
 35
Rotenone 2 μg 12 hrs, larvae L3
 
 18
Rotenone 8 μg 12 hrs, larvae L3
 
 12
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 16
cold shock, 4-day adult
 
 10
heat shock, 4-day adult
 (28)
Cadmium 50 mM 6 hrs, larvae L3
 
 14
Cadmium 50 mM 12 hrs, larvae L3
 
 23
Cadmium 50 mM 48 hrs, 4-day adult
 
 22
Cadmium 100 mM 48 hrs, 4-day adult
 (50)
Copper 0.5 mM 12 hrs, larvae L3
 
 7
Copper 15 mM 48 hrs, 4-day adult
 26
Zinc 5 mM 12 hrs, larvae L3
 
 8
Zinc 4.5 mM 48 hrs, 4-day adult
 
 14
Ethanol 2.5% 3 hrs, larvae L3
 (50)
Ethanol 5% 3 hrs, larvae L3
 
 16
Ethanol 10% 3 hrs, larvae L3
 
 13
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 11
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 (44)
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 17
Paraquat 5 mM 48 hrs, 4-day adult
 (43)
Paraquat 10 mM 48 hrs, 4-day adult
 (35)
Rotenone 2 μg 12 hrs, larvae L3
 
 18
Rotenone 8 μg 12 hrs, larvae L3
 
 12
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 16
cold shock, 4-day adult
 
 10
heat shock, 4-day adult
 
 28
Cadmium 50 mM 6 hrs, larvae L3
 
 14
Cadmium 50 mM 12 hrs, larvae L3
 
 23
Cadmium 50 mM 48 hrs, 4-day adult
 
 22
Cadmium 100 mM 48 hrs, 4-day adult
 
 50
Copper 0.5 mM 12 hrs, larvae L3
 
 7
Copper 15 mM 48 hrs, 4-day adult
 
 26
Zinc 5 mM 12 hrs, larvae L3
 
 8
Zinc 4.5 mM 48 hrs, 4-day adult
 
 14
Ethanol 2.5% 3 hrs, larvae L3
 
 50
Ethanol 5% 3 hrs, larvae L3
 
 16
Ethanol 10% 3 hrs, larvae L3
 
 13
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 11
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 44
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 17
Paraquat 5 mM 48 hrs, 4-day adult
 
 43
Paraquat 10 mM 48 hrs, 4-day adult
 
 35
Rotenone 2 μg 12 hrs, larvae L3
 
 18
Rotenone 8 μg 12 hrs, larvae L3
 
 12
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 16
cold shock, 4-day adult
 
 10
heat shock, 4-day adult
 
 28
Cadmium 50 mM 6 hrs, larvae L3
 
 14
Cadmium 50 mM 12 hrs, larvae L3
 
 23
Cadmium 50 mM 48 hrs, 4-day adult
 
 22
Cadmium 100 mM 48 hrs, 4-day adult
 
 50
Copper 0.5 mM 12 hrs, larvae L3
 
 7
Copper 15 mM 48 hrs, 4-day adult
 
 26
Zinc 5 mM 12 hrs, larvae L3
 
 8
Zinc 4.5 mM 48 hrs, 4-day adult
 
 14
Ethanol 2.5% 3 hrs, larvae L3
 
 50
Ethanol 5% 3 hrs, larvae L3
 
 16
Ethanol 10% 3 hrs, larvae L3
 
 13
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 11
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 44
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 17
Paraquat 5 mM 48 hrs, 4-day adult
 
 43
Paraquat 10 mM 48 hrs, 4-day adult
 
 35
Rotenone 2 μg 12 hrs, larvae L3
 
 18
Rotenone 8 μg 12 hrs, larvae L3
 
 12
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 16
cold shock, 4-day adult
 
 10
heat shock, 4-day adult
 
 28
Cadmium 50 mM 6 hrs, larvae L3
 
 14
Cadmium 50 mM 12 hrs, larvae L3
 
 23
Cadmium 50 mM 48 hrs, 4-day adult
 
 22
Cadmium 100 mM 48 hrs, 4-day adult
 
 50
Copper 0.5 mM 12 hrs, larvae L3
 
 7
Copper 15 mM 48 hrs, 4-day adult
 
 26
Zinc 5 mM 12 hrs, larvae L3
 
 8
Zinc 4.5 mM 48 hrs, 4-day adult
 
 14
Ethanol 2.5% 3 hrs, larvae L3
 
 50
Ethanol 5% 3 hrs, larvae L3
 
 16
Ethanol 10% 3 hrs, larvae L3
 
 13
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 11
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 44
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 17
Paraquat 5 mM 48 hrs, 4-day adult
 
 43
Paraquat 10 mM 48 hrs, 4-day adult
 
 35
Rotenone 2 μg 12 hrs, larvae L3
 
 18
Rotenone 8 μg 12 hrs, larvae L3
 
 12
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
log, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 16
cold shock, 4-day adult
 
 10
heat shock, 4-day adult
 28
Cadmium 50 mM 6 hrs, larvae L3
 
 14
Cadmium 50 mM 12 hrs, larvae L3
 
 23
Cadmium 50 mM 48 hrs, 4-day adult
 
 22
Cadmium 100 mM 48 hrs, 4-day adult
 (50)
Copper 0.5 mM 12 hrs, larvae L3
 
 7
Copper 15 mM 48 hrs, 4-day adult
 26
Zinc 5 mM 12 hrs, larvae L3
 
 8
Zinc 4.5 mM 48 hrs, 4-day adult
 
 14
Ethanol 2.5% 3 hrs, larvae L3
 (50)
Ethanol 5% 3 hrs, larvae L3
 
 16
Ethanol 10% 3 hrs, larvae L3
 
 13
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 11
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 (44)
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 17
Paraquat 5 mM 48 hrs, 4-day adult
 (43)
Paraquat 10 mM 48 hrs, 4-day adult
 (35)
Rotenone 2 μg 12 hrs, larvae L3
 
 18
Rotenone 8 μg 12 hrs, larvae L3
 
 12
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 16
cold shock, 4-day adult
 
 10
heat shock, 4-day adult
 
 28
Cadmium 50 mM 6 hrs, larvae L3
 
 14
Cadmium 50 mM 12 hrs, larvae L3
 
 23
Cadmium 50 mM 48 hrs, 4-day adult
 
 22
Cadmium 100 mM 48 hrs, 4-day adult
 
 50
Copper 0.5 mM 12 hrs, larvae L3
 
 7
Copper 15 mM 48 hrs, 4-day adult
 
 26
Zinc 5 mM 12 hrs, larvae L3
 
 8
Zinc 4.5 mM 48 hrs, 4-day adult
 
 14
Ethanol 2.5% 3 hrs, larvae L3
 
 50
Ethanol 5% 3 hrs, larvae L3
 
 16
Ethanol 10% 3 hrs, larvae L3
 
 13
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 11
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 44
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 17
Paraquat 5 mM 48 hrs, 4-day adult
 
 43
Paraquat 10 mM 48 hrs, 4-day adult
 
 35
Rotenone 2 μg 12 hrs, larvae L3
 
 18
Rotenone 8 μg 12 hrs, larvae L3
 
 12
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 16
cold shock, 4-day adult
 
 10
heat shock, 4-day adult
 
 28
Cadmium 50 mM 6 hrs, larvae L3
 
 14
Cadmium 50 mM 12 hrs, larvae L3
 
 23
Cadmium 50 mM 48 hrs, 4-day adult
 
 22
Cadmium 100 mM 48 hrs, 4-day adult
 
 50
Copper 0.5 mM 12 hrs, larvae L3
 
 7
Copper 15 mM 48 hrs, 4-day adult
 
 26
Zinc 5 mM 12 hrs, larvae L3
 
 8
Zinc 4.5 mM 48 hrs, 4-day adult
 
 14
Ethanol 2.5% 3 hrs, larvae L3
 
 50
Ethanol 5% 3 hrs, larvae L3
 
 16
Ethanol 10% 3 hrs, larvae L3
 
 13
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 11
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 44
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 17
Paraquat 5 mM 48 hrs, 4-day adult
 
 43
Paraquat 10 mM 48 hrs, 4-day adult
 
 35
Rotenone 2 μg 12 hrs, larvae L3
 
 18
Rotenone 8 μg 12 hrs, larvae L3
 
 12
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Treatment   Expression Level
extended cold, 4-day adult
 
 
cold shock, 4-day adult
 
 
heat shock, 4-day adult
 
 
Cadmium 50 mM 6 hrs, larvae L3
 
 
Cadmium 50 mM 12 hrs, larvae L3
 
 
Cadmium 50 mM 48 hrs, 4-day adult
 
 
Cadmium 100 mM 48 hrs, 4-day adult
 
 
Copper 0.5 mM 12 hrs, larvae L3
 
 
Copper 15 mM 48 hrs, 4-day adult
 
 
Zinc 5 mM 12 hrs, larvae L3
 
 
Zinc 4.5 mM 48 hrs, 4-day adult
 
 
Ethanol 2.5% 3 hrs, larvae L3
 
 
Ethanol 5% 3 hrs, larvae L3
 
 
Ethanol 10% 3 hrs, larvae L3
 
 
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 
Paraquat 5 mM 48 hrs, 4-day adult
 
 
Paraquat 10 mM 48 hrs, 4-day adult
 
 
Rotenone 2 μg 12 hrs, larvae L3
 
 
Rotenone 8 μg 12 hrs, larvae L3
 
 

hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
cell cortex & cortical cytoskeleton, with Scer\GAL4repo
embryonic neuroblast & spindle, with Scer\GAL4mat.αTub67C.T:Hsim\VP16
lateral cord surface glia & nucleus, with Scer\GAL4repo
mitotic domain 9 & epithelial cell
sensory mother cell & spindle, with Scer\GAL4sca-109-68
spindle & external sensory organ precursor cell I
spindle & neuroblast
spindle pole centrosome & astral microtubule, with Scer\GAL4sca-P309
hide Classical Alleles ( 19 )
For All Classical Alleles Show

Allele of GαiClassMutagenStocksKnown lesion
Gαi5-HA-1168
1 --
GαiCB-6162-3
1 --
Gαid063101 --
GαiEY03976b1 --
GαiEY103551 --
GαiKG019071 --
GαiMB07632
1 --
GαiNP4704
1 --
Gαi570 Yes
GαiDG24505
0 --
Gαie020440 --
GαiGS-A28880 --
GαiP200 Yes
GαiP290 Yes
GαiP50 Yes
GαiP60 Yes
GαiP70 Yes
GαiP8loss of function allele0 Yes
Gαiunspecified
0 --
hide Alleles Carried on Transgenic Constructs ( 14 )
For All Alleles Carried on Transgenic Constructs Show

Allele of GαiClassMutagenStocksKnown lesion
GαiGD125761 Yes
GαiGL003281 Yes
GαiHMS012731 Yes
GαiHMS021381 Yes
GαiJF016081 Yes
GαidsRNA.cCa0 Yes
GαidsRNA.Scer\UAS0 Yes
GαiG204A.Scer\UAS0 Yes
Gαipept.Scer\UAS0 Yes
GαiQ205L.Scer\UAS0 Yes
GαiScer\UAS.cCa0 Yes
GαiScer\UAS.cFa0 Yes
GαiScer\UAS.cLa0 Yes
GαiScer\UAS.cUa0 Yes
hide Aneuploid Aberrations
Disrupted in
Partially disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
insertion of enhancer trap binary system
hide Gene Ontology: Function, Process & Cellular Component ( 23 unique terms )
hide Terms Based on Experimental Evidence ( 12 terms )
Molecular Function
CV term
References
inferred from direct assay
inferred from physical interaction with loco
inferred from physical interaction with raps
Biological Process
CV term
References
inferred from mutant phenotype
inferred from mutant phenotype
Cellular Component
CV term
References
hide Terms Based on Predictions or Assertions ( 11 terms )
Molecular Function
CV term
References
inferred from biological aspect of ancestor with PANTHER:PTN000026392
(assigned by RefGenome)
inferred from biological aspect of ancestor with PANTHER:PTN000026392
(assigned by RefGenome)
inferred from biological aspect of ancestor with PANTHER:PTN000026392
(assigned by RefGenome)
inferred from sequence or structural similarity with UniProtKB:P41776
non-traceable author statement
inferred from electronic annotation with InterPro:IPR001408
inferred from biological aspect of ancestor with PANTHER:PTN000026392
(assigned by RefGenome)
Biological Process
CV term
References
inferred from biological aspect of ancestor with PANTHER:PTN000026392
(assigned by RefGenome)
inferred from sequence or structural similarity with UniProtKB:P41776
non-traceable author statement
Cellular Component
CV term
References
traceable author statement
inferred from biological aspect of ancestor with PANTHER:PTN000026392
(assigned by RefGenome)
inferred from biological aspect of ancestor with PANTHER:PTN000026392
(assigned by RefGenome)
inferred from sequence or structural similarity with UniProtKB:P41776
non-traceable author statement
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
protein-protein
Interacting group
Assay
References
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti bait coimmunoprecipitation, western blot, anti tag coimmunoprecipitation
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
Gαi allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
hide OrthoDB Orthologs (97) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
Insect inclusive ortholog search
Arthropod inclusive ortholog search
Metazoa inclusive ortholog search
hideOrthologs in Drosophila Species (EOG6FR1BM)
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly 
 
 
Drosophila simulans
 
Y
 
Drosophila sechellia
 
Y
 
Drosophila erecta
 
Y
 
Drosophila yakuba
 
Y
 
Drosophila ananassae
 
Y
 
Drosophila pseudoobscura pseudoobscura
 
Y
 
Drosophila willistoni
 
Y
 
Drosophila virilis
 
Y
 
Drosophila mojavensis
 
Y
 
Drosophila grimshawi
 
Y
 
hideOrthologs in non-Drosophila Dipterans (EOG6SF9FM)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Aedes aegypti
Yellow fever mosquito 
 
Aedes aegypti
Yellow fever mosquito 
 
Anopheles gambiae
Malaria mosquito 
 
Culex quinquefasciatus
Southern house mosquito 
 
Culex quinquefasciatus
Southern house mosquito 
 
hideOrthologs in non-Dipteran Insects (EOG6J6QMG)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Apis mellifera
Western honey bee 
Amel\LOC411704
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG037232
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG031438
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG019514
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG017607
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH14539
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH12191
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP18018
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP10660
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO18126
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO21977
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL13552
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL15055
Y
Linepithema humile
Argentine ant 
Lhum\LH24762
Y
Linepithema humile
Argentine ant 
Lhum\LH21928
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB19876
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB24405
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV18421
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV26210
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Bombyx mori
Silkmoth 
Y
Pediculus humanus
Human body louse 
Y
Pediculus humanus
Human body louse 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
hideOrthologs in non-Insect Arthropods (EOG6R229D)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Ixodes scapularis
Deer tick 
Y
hideOrthologs in non-Arthropod Metazoa (EOG6S528Z)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Xenopus tropicalis
Western clawed frog 
Y
Xenopus tropicalis
Western clawed frog 
Y
Xenopus tropicalis
Western clawed frog 
Y
Xenopus tropicalis
Western clawed frog 
Y
Xenopus tropicalis
Western clawed frog 
Y
Xenopus tropicalis
Western clawed frog 
Y
Xenopus tropicalis
Western clawed frog 
Y
Gallus gallus
Domestic chicken 
Y
Gallus gallus
Domestic chicken 
Y
Gallus gallus
Domestic chicken 
Y
Gallus gallus
Domestic chicken 
Y
Gallus gallus
Domestic chicken 
Y
Gallus gallus
Domestic chicken 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Rattus norvegicus
Norway rat 
Y
Rattus norvegicus
Norway rat 
Y
Rattus norvegicus
Norway rat 
Y
Rattus norvegicus
Norway rat 
Y
Rattus norvegicus
Norway rat 
Y
Rattus norvegicus
Norway rat 
Y
Rattus norvegicus
Norway rat 
Y
Rattus norvegicus
Norway rat 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
hide Human Orthologs (7)
Gene
OMIM
HGNC
 
 
hideAAA Orthologs (10) based on analysis using Dmel annotation version 4.3
Organism
Gene
Drosophila simulans
Drosophila sechellia
Drosophila erecta
Drosophila yakuba
Drosophila ananassae
Drosophila pseudoobscura pseudoobscura
Drosophila willistoni
Drosophila virilis
Drosophila mojavensis
Drosophila grimshawi
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 13 )
Bloomington
Harvard
Kyoto
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 131 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for identity of: G-oα65A CG10060
Source for identity of: Gαi G-iα65A
Source for database merge of
Additional comments
FlyBase curator comment: Genes encoding Gα subunits that have been named for their molecular function/orthology have had their symbols and names standardized following the format used in FBrf0220456, which also reflects popular usage in the Drosophila literature.
hide Other Comments
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
dsRNA made from templates generated with primers against this gene tested in a cl-8 cell reporter assay to examine any role of G-iα65A in the hh signalling pathway.
Overexpression of G-iα65A results in defects in both spindle orientation and determinant localisation in neuroblasts and sensory organ precursor cells.
Dominant adult phenotypes can be caused by the overexpression of activated Gα proteins.
Posterior localization of the G-iα65A protein during early embryogenesis requires a subset of the posterior group genes.
The expression of G-iα65A during development has been studied.
G-iα65A protein expression in the adult Drosophila central nervous system has been studied.
Isolated from a genomic library using bovine rod and cone transducin α subunit cDNAs as probe.
G-iα65A has been cloned and sequenced.
G proteins belong to a family of membrane-associated guanine nucleotide-binding proteins that couple specific receptors for extracellular signals to specific intracellular effectors, thus regulating the activity of these effectors. When not interacting with the receptor, G proteins are usually in the form of a heterotrimer made up of α, β and γ subunits, with the α subunit bound to GDP. Upon activation by the receptor, the α subunit exchanges GDP for GTP, dissociates from the β-γ subunits and interacts with the effector. Afterwards GTP is hydrolyzed and the heterotrimer of α, β and γ subunits is formed again.
 
Encodes a G protein α subunit displaying sequence homology to mammalian Giα that inhibits adenylate cyclase activity. The G protein is uniformly distributed in oocytes, becomes restricted to the posterior pole of the embryo during early cleavage and is lost during the blastoderm stage (Wolfgang et al., 1990).
 
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
hide Synonyms & Secondary IDs ( 33 )
Reported As
Symbol Synonym
Galpha65A
G-oα65A
 
G-α-65A
 
Name Synonym
G protein alpha subunit
G protein alpha-subunit
G protein I a-subunit 65A
G protein α i subunit
 
G protein αi subunit 65A
 
G protein α o subunit 65A
G protein αo subunit 65A
 
Secondary FlyBase IDs
hide References ( 138 )
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hide Recent research papers ( 11 )
Cheng et al., 2012, Development 139(1): 85--94
Drosophila G-protein-coupled receptor kinase 2 regulates cAMP-dependent Hedgehog signaling. [FBrf0216860]
Koon and Budnik, 2012, J. Neurosci. 32(18): 6312--6322
Inhibitory control of synaptic and behavioral plasticity by octopaminergic signaling. [FBrf0218256]
Mauser and Prehoda, 2012, PLoS ONE 7(1): e29611
Inscuteable regulates the Pins-Mud spindle orientation pathway. [FBrf0218437]
Shirasaki et al., 2012, Neuron 75(1): 41--57
Network organization of the huntingtin proteomic interactome in Mammalian brain. [FBrf0218881]
Yoshiura et al., 2012, Dev. Cell 22(1): 79--91
Tre1 GPCR Signaling Orients Stem Cell Divisions in the Drosophila Central Nervous System. [FBrf0217269]
Bredendiek et al., 2011, Chem. Senses 36(1): 69--81
Go α is involved in sugar perception in Drosophila. [FBrf0212580]
Connell et al., 2011, Mol. Biol. Cell 22(22): 4220--4226
Asymmetric cortical extension shifts cleavage furrow position in Drosophila neuroblasts. [FBrf0216801]
Deng et al., 2011, PLoS ONE 6(4): e18605
The Stimulatory Gα(s) Protein Is Involved in Olfactory Signal Transduction in Drosophila. [FBrf0213437]
Guo et al., 2011, Sleep (Rochester) 34(3): 273--281
Go signaling in mushroom bodies regulates sleep in Drosophila. [FBrf0213134]
Lin et al., 2011, Small Gtpases 2(3): 158--161
Loco signaling pathway in longevity. [FBrf0214455]
Smith and Prehoda, 2011, Mol. Cell 43(4): 540--549
Robust spindle alignment in Drosophila neuroblasts by ultrasensitive activation of pins. [FBrf0214708]
hide Recent reviews (0)
All reviews listed in FlyBase were published before 2011