A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\Gβ13F

General Information
SymbolDmel\Gβ13FSpeciesD. melanogaster
NameG protein β-subunit 13FAnnotation symbolCG10545
Feature typeprotein_coding_geneFlyBase IDFBgn0001105
Gene Model StatusCurrent Stock availability 6 publicly available
Also Known AsGbeta13F, Gβ, G-beta, Gb13F, Gbb
Genomic Location
Chromosome (arm)XRecombination map
Cytogenetic map13F16-13F16Sequence locationX:15,754,159..15,756,919 [+]

Genomic Maps

GBrowse View Help
modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene G protein β-subunit 13F is referred to in FlyBase by the symbol Dmel\Gβ13F (CG10545, FBgn0001105). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: GTPase activity. There is experimental evidence that it is involved in the biological process: asymmetric neuroblast division; actin filament organization. 17 alleles are reported. The phenotypes of these alleles are annotated with: trichogen cell; embryonic neuroblast; mesothoracic tergum. It has 6 annotated transcripts and 6 annotated polypeptides. Protein features are: G-protein beta WD-40 repeat; G-protein, beta subunit; Guanine nucleotide-binding protein, beta subunit; WD40 repeat; WD40 repeat 2; WD40 repeat, conserved site; WD40 repeat, subgroup; WD40 repeat-like-containing domain; WD40-repeat-containing domain; WD40/YVTN repeat-like-containing domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed within 00-18 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval midgut, larval/adult hindgut, larval Malpighian tubules, adult heart, larval fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult midgut, adult Malpighian tubules, adult fat body, adult testis. Comments on Affy2 ProbeSet: ProbeSet 1627398_a_at completely aligns to an exonic region common to each of the 6 FlyBase-annotated transcript isoforms of Gbeta13F. Gene sequence location is X:15754159..15756919.

hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
Gβ13F: G protein β subunit at 13F
This gene encodes one isoform of the G protein β subunit in Drosophila melanogaster. After the G protein α has interacted with the effector, the β-γ subunits reassociate with the α subunit and bring the α subunit to its specific receptor.
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2012_01
Sequence features
FB2011_10
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
13F16-13F16  
Limits computationally determined from genome sequence between P{EP}BEST:RE35685EP1581&P{EP}sdEP1088 and P{EP}Gβ13FEP1071  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
13F-13F  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\Gβ13F for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0074168 FBtr0074109 FBtr0074106 FBtr0074108 FBtr0074107 FBtr0074111 FBtr0074110 FBpp0089414 FBpp0089185 FBpp0089184 FBpp0089183 FBpp0073920 FBpp0073921 FBpp0089182 FBti0007357 FBti0071316 FBti0039043 FBti0013916 FBti0071494
Comments on Gene Model
EST data suggest additional 5' exon(s)
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0074107
  1950
  340
FBtr0074106
  1562
  340
FBtr0074108
  1787
  340
FBtr0074109
  1859
  340
FBtr0074110
  2112
  340
FBtr0074111
  1871
  340
Additional Transcript Data & Comments
Reported size (kB)
5.2, 4.2, 3.3, 3.0 (unknown); 3.1, 2.5, 2.0, 1.9 (northern blot)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0073921  
37.1  
340  
6.41  
FBpp0073920  
37.1  
340  
6.41  
FBpp0089182  
37.1  
340  
6.41  
FBpp0089183  
37.1  
340  
6.41  
FBpp0089184  
37.1  
340  
6.41  
FBpp0089185  
37.1  
340  
6.41  
Additional Polypeptide Data & Comments
Reported size (kDa)
37 (kD observed)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
radioisotope in situ
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
A monoclonal antibody generated against Gβ13F protein also recognizes Gβ76C protein. The antibody stains the brain neuropil and cortex, the eye, and the thoracic ganglion; the staining in the brain neuropil and cortex, and thoracic ganglion is due to Gβ13F protein.
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view AlkB-RA Gbeta13F-RD Gbeta13F-RB Gbeta13F-RC Gbeta13F-RA Gbeta13F-RF Gbeta13F-RE
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0001105


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0001105
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed within 00-18 hour embryonic stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0001105 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 10347
embryo 02-04hr
 
 14204
embryo 04-06hr
 
 12224
embryo 06-08hr
 
 11488
embryo 08-10hr
 
 13113
embryo 10-12hr
 
 16816
embryo 12-14hr
 
 11147
embryo 14-16hr
 
 13749
embryo 16-18hr
 
 11860
embryo 18-20hr
 
 9333
embryo 20-22hr
 
 8191
embryo 22-24hr
 
 7549
larva L1
 
 6830
larva L2
 
 4506
larva L3 12hr old
 
 3559
larva L3 puffstage 1-2
 
 2557
larva L3 puffstage 3-6
 
 5649
larva L3 puffstage 7-9
 
 6985
white prepupae new
 
 8241
white prepupae 12hr
 
 7711
white prepupae 24hr
 
 8489
pupae 2d postWPP
 
 7792
pupae 3d postWPP
 
 5761
pupae 4d postWPP
 
 4026
adult male 01day
 
 3579
adult male 05day
 
 3805
adult male 30day
 
 3757
adult female 01day
 
 6087
adult female 05day
 
 7300
adult female 30day
 
 7067
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (10347)
embryo 02-04hr
 (14204)
embryo 04-06hr
 (12224)
embryo 06-08hr
 (11488)
embryo 08-10hr
 (13113)
embryo 10-12hr
 (16816)
embryo 12-14hr
 (11147)
embryo 14-16hr
 (13749)
embryo 16-18hr
 (11860)
embryo 18-20hr
 (9333)
embryo 20-22hr
 (8191)
embryo 22-24hr
 (7549)
larva L1
 (6830)
larva L2
 (4506)
larva L3 12hr old
 (3559)
larva L3 puffstage 1-2
 (2557)
larva L3 puffstage 3-6
 (5649)
larva L3 puffstage 7-9
 (6985)
white prepupae new
 (8241)
white prepupae 12hr
 (7711)
white prepupae 24hr
 (8489)
pupae 2d postWPP
 (7792)
pupae 3d postWPP
 (5761)
pupae 4d postWPP
 (4026)
adult male 01day
 (3579)
adult male 05day
 (3805)
adult male 30day
 (3757)
adult female 01day
 (6087)
adult female 05day
 (7300)
adult female 30day
 (7067)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (10347)
embryo 02-04hr
 (14204)
embryo 04-06hr
 (12224)
embryo 06-08hr
 (11488)
embryo 08-10hr
 (13113)
embryo 10-12hr
 (16816)
embryo 12-14hr
 (11147)
embryo 14-16hr
 (13749)
embryo 16-18hr
 (11860)
embryo 18-20hr
 (9333)
embryo 20-22hr
 (8191)
embryo 22-24hr
 (7549)
larva L1
 (6830)
larva L2
 (4506)
larva L3 12hr old
 (3559)
larva L3 puffstage 1-2
 (2557)
larva L3 puffstage 3-6
 (5649)
larva L3 puffstage 7-9
 (6985)
white prepupae new
 (8241)
white prepupae 12hr
 (7711)
white prepupae 24hr
 (8489)
pupae 2d postWPP
 (7792)
pupae 3d postWPP
 (5761)
pupae 4d postWPP
 (4026)
adult male 01day
 (3579)
adult male 05day
 (3805)
adult male 30day
 (3757)
adult female 01day
 (6087)
adult female 05day
 (7300)
adult female 30day
 (7067)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 10347
embryo 02-04hr
 (14204)
embryo 04-06hr
 (12224)
embryo 06-08hr
 (11488)
embryo 08-10hr
 (13113)
embryo 10-12hr
 (16816)
embryo 12-14hr
 (11147)
embryo 14-16hr
 (13749)
embryo 16-18hr
 (11860)
embryo 18-20hr
 
 9333
embryo 20-22hr
 
 8191
embryo 22-24hr
 
 7549
larva L1
 
 6830
larva L2
 
 4506
larva L3 12hr old
 
 3559
larva L3 puffstage 1-2
 
 2557
larva L3 puffstage 3-6
 
 5649
larva L3 puffstage 7-9
 
 6985
white prepupae new
 
 8241
white prepupae 12hr
 
 7711
white prepupae 24hr
 
 8489
pupae 2d postWPP
 
 7792
pupae 3d postWPP
 
 5761
pupae 4d postWPP
 
 4026
adult male 01day
 
 3579
adult male 05day
 
 3805
adult male 30day
 
 3757
adult female 01day
 
 6087
adult female 05day
 
 7300
adult female 30day
 
 7067
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 10347
embryo 02-04hr
 
 14204
embryo 04-06hr
 
 12224
embryo 06-08hr
 
 11488
embryo 08-10hr
 
 13113
embryo 10-12hr
 
 16816
embryo 12-14hr
 
 11147
embryo 14-16hr
 
 13749
embryo 16-18hr
 
 11860
embryo 18-20hr
 
 9333
embryo 20-22hr
 
 8191
embryo 22-24hr
 
 7549
larva L1
 
 6830
larva L2
 
 4506
larva L3 12hr old
 
 3559
larva L3 puffstage 1-2
 
 2557
larva L3 puffstage 3-6
 
 5649
larva L3 puffstage 7-9
 
 6985
white prepupae new
 
 8241
white prepupae 12hr
 
 7711
white prepupae 24hr
 
 8489
pupae 2d postWPP
 
 7792
pupae 3d postWPP
 
 5761
pupae 4d postWPP
 
 4026
adult male 01day
 
 3579
adult male 05day
 
 3805
adult male 30day
 
 3757
adult female 01day
 
 6087
adult female 05day
 
 7300
adult female 30day
 
 7067
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0001105 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 10347
embryo 02-04hr
 
 14204
embryo 04-06hr
 
 12224
embryo 06-08hr
 
 11488
embryo 08-10hr
 
 13113
embryo 10-12hr
 
 16816
embryo 12-14hr
 
 11147
embryo 14-16hr
 
 13749
embryo 16-18hr
 
 11860
embryo 18-20hr
 
 9333
embryo 20-22hr
 
 8191
embryo 22-24hr
 
 7549
larva L1
 
 6830
larva L2
 
 4506
larva L3 12hr old
 
 3559
larva L3 puffstage 1-2
 
 2557
larva L3 puffstage 3-6
 
 5649
larva L3 puffstage 7-9
 
 6985
white prepupae new
 
 8241
white prepupae 12hr
 
 7711
white prepupae 24hr
 
 8489
pupae 2d postWPP
 
 7792
pupae 3d postWPP
 
 5761
pupae 4d postWPP
 
 4026
adult male 01day
 
 3579
adult male 05day
 
 3805
adult male 30day
 
 3757
adult female 01day
 
 6087
adult female 05day
 
 7300
adult female 30day
 
 7067
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (10347)
embryo 02-04hr
 (14204)
embryo 04-06hr
 (12224)
embryo 06-08hr
 (11488)
embryo 08-10hr
 (13113)
embryo 10-12hr
 (16816)
embryo 12-14hr
 (11147)
embryo 14-16hr
 (13749)
embryo 16-18hr
 (11860)
embryo 18-20hr
 (9333)
embryo 20-22hr
 (8191)
embryo 22-24hr
 (7549)
larva L1
 (6830)
larva L2
 (4506)
larva L3 12hr old
 (3559)
larva L3 puffstage 1-2
 (2557)
larva L3 puffstage 3-6
 (5649)
larva L3 puffstage 7-9
 (6985)
white prepupae new
 (8241)
white prepupae 12hr
 (7711)
white prepupae 24hr
 (8489)
pupae 2d postWPP
 (7792)
pupae 3d postWPP
 (5761)
pupae 4d postWPP
 (4026)
adult male 01day
 (3579)
adult male 05day
 (3805)
adult male 30day
 (3757)
adult female 01day
 (6087)
adult female 05day
 (7300)
adult female 30day
 (7067)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (10347)
embryo 02-04hr
 (14204)
embryo 04-06hr
 (12224)
embryo 06-08hr
 (11488)
embryo 08-10hr
 (13113)
embryo 10-12hr
 (16816)
embryo 12-14hr
 (11147)
embryo 14-16hr
 (13749)
embryo 16-18hr
 (11860)
embryo 18-20hr
 (9333)
embryo 20-22hr
 (8191)
embryo 22-24hr
 (7549)
larva L1
 (6830)
larva L2
 (4506)
larva L3 12hr old
 (3559)
larva L3 puffstage 1-2
 (2557)
larva L3 puffstage 3-6
 (5649)
larva L3 puffstage 7-9
 (6985)
white prepupae new
 (8241)
white prepupae 12hr
 (7711)
white prepupae 24hr
 (8489)
pupae 2d postWPP
 (7792)
pupae 3d postWPP
 (5761)
pupae 4d postWPP
 (4026)
adult male 01day
 (3579)
adult male 05day
 (3805)
adult male 30day
 (3757)
adult female 01day
 (6087)
adult female 05day
 (7300)
adult female 30day
 (7067)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 10347
embryo 02-04hr
 14204
embryo 04-06hr
 12224
embryo 06-08hr
 11488
embryo 08-10hr
 13113
embryo 10-12hr
 16816
embryo 12-14hr
 11147
embryo 14-16hr
 13749
embryo 16-18hr
 11860
embryo 18-20hr
 
 9333
embryo 20-22hr
 
 8191
embryo 22-24hr
 
 7549
larva L1
 
 6830
larva L2
 
 4506
larva L3 12hr old
 
 3559
larva L3 puffstage 1-2
 
 2557
larva L3 puffstage 3-6
 
 5649
larva L3 puffstage 7-9
 
 6985
white prepupae new
 
 8241
white prepupae 12hr
 
 7711
white prepupae 24hr
 
 8489
pupae 2d postWPP
 
 7792
pupae 3d postWPP
 
 5761
pupae 4d postWPP
 
 4026
adult male 01day
 
 3579
adult male 05day
 
 3805
adult male 30day
 
 3757
adult female 01day
 
 6087
adult female 05day
 
 7300
adult female 30day
 
 7067
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 10347
embryo 02-04hr
 
 14204
embryo 04-06hr
 
 12224
embryo 06-08hr
 
 11488
embryo 08-10hr
 
 13113
embryo 10-12hr
 
 16816
embryo 12-14hr
 
 11147
embryo 14-16hr
 
 13749
embryo 16-18hr
 
 11860
embryo 18-20hr
 
 9333
embryo 20-22hr
 
 8191
embryo 22-24hr
 
 7549
larva L1
 
 6830
larva L2
 
 4506
larva L3 12hr old
 
 3559
larva L3 puffstage 1-2
 
 2557
larva L3 puffstage 3-6
 
 5649
larva L3 puffstage 7-9
 
 6985
white prepupae new
 
 8241
white prepupae 12hr
 
 7711
white prepupae 24hr
 
 8489
pupae 2d postWPP
 
 7792
pupae 3d postWPP
 
 5761
pupae 4d postWPP
 
 4026
adult male 01day
 
 3579
adult male 05day
 
 3805
adult male 30day
 
 3757
adult female 01day
 
 6087
adult female 05day
 
 7300
adult female 30day
 
 7067
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0001105


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0001105
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval midgut, larval/adult hindgut, larval Malpighian tubules, adult heart, larval fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult midgut, adult Malpighian tubules, adult fat body, adult testis.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0001105 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 1522.4
Larval Midgut
 
 638.4
Larval Hindgut
 
 902.5
Larval Malpighian Tubules
 
 1079.6
Larval Fat Body
 
 789.5
Larval Salivary Gland
 
 565.1
Larval Trachea
 
 1349.325
Larval Carcass
 
 798.85
Adult Head
 
 635.4
Adult Eye
 
 1289.35
Adult Brain
 
 1502.4
Adult Thoracic-Abdominal Ganglion
 
 1568.9
Adult Crop
 
 869.5
Adult Midgut
 
 443.4
Adult Hindgut
 
 751.4
Adult Malpighian Tubules
 
 475.7
Adult Fat Body
 
 447
Adult Salivary Gland
 
 672.7
Adult Heart
 
 1364.3
Adult VirginFemale Spermatheca
 
 587.4
Adult InseminatedFemale Spermatheca
 
 522.9
Adult Ovary
 
 858.2
Adult Testis
 
 347.7
Adult Male Accessory Gland
 
 547
Adult Carcass
 
 554
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (1522.4)
Larval Midgut
 (638.4)
Larval Hindgut
 (902.5)
Larval Malpighian Tubules
 (1079.6)
Larval Fat Body
 (789.5)
Larval Salivary Gland
 (565.1)
Larval Trachea
 (1349.325)
Larval Carcass
 (798.85)
Adult Head
 (635.4)
Adult Eye
 (1289.35)
Adult Brain
 (1502.4)
Adult Thoracic-Abdominal Ganglion
 (1568.9)
Adult Crop
 (869.5)
Adult Midgut
 
 443.4
Adult Hindgut
 (751.4)
Adult Malpighian Tubules
 
 475.7
Adult Fat Body
 
 447
Adult Salivary Gland
 (672.7)
Adult Heart
 (1364.3)
Adult VirginFemale Spermatheca
 (587.4)
Adult InseminatedFemale Spermatheca
 522.9
Adult Ovary
 (858.2)
Adult Testis
 
 347.7
Adult Male Accessory Gland
 (547)
Adult Carcass
 (554)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 (1522.4)
Larval Midgut
 
 638.4
Larval Hindgut
 
 902.5
Larval Malpighian Tubules
 (1079.6)
Larval Fat Body
 
 789.5
Larval Salivary Gland
 
 565.1
Larval Trachea
 (1349.325)
Larval Carcass
 
 798.85
Adult Head
 
 635.4
Adult Eye
 (1289.35)
Adult Brain
 (1502.4)
Adult Thoracic-Abdominal Ganglion
 (1568.9)
Adult Crop
 
 869.5
Adult Midgut
 
 443.4
Adult Hindgut
 
 751.4
Adult Malpighian Tubules
 
 475.7
Adult Fat Body
 
 447
Adult Salivary Gland
 
 672.7
Adult Heart
 (1364.3)
Adult VirginFemale Spermatheca
 
 587.4
Adult InseminatedFemale Spermatheca
 
 522.9
Adult Ovary
 
 858.2
Adult Testis
 
 347.7
Adult Male Accessory Gland
 
 547
Adult Carcass
 
 554
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 1522.4
Larval Midgut
 
 638.4
Larval Hindgut
 
 902.5
Larval Malpighian Tubules
 
 1079.6
Larval Fat Body
 
 789.5
Larval Salivary Gland
 
 565.1
Larval Trachea
 
 1349.325
Larval Carcass
 
 798.85
Adult Head
 
 635.4
Adult Eye
 
 1289.35
Adult Brain
 
 1502.4
Adult Thoracic-Abdominal Ganglion
 
 1568.9
Adult Crop
 
 869.5
Adult Midgut
 
 443.4
Adult Hindgut
 
 751.4
Adult Malpighian Tubules
 
 475.7
Adult Fat Body
 
 447
Adult Salivary Gland
 
 672.7
Adult Heart
 
 1364.3
Adult VirginFemale Spermatheca
 
 587.4
Adult InseminatedFemale Spermatheca
 
 522.9
Adult Ovary
 
 858.2
Adult Testis
 
 347.7
Adult Male Accessory Gland
 
 547
Adult Carcass
 
 554
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0001105 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 1522.4
Larval Midgut
 
 638.4
Larval Hindgut
 
 902.5
Larval Malpighian Tubules
 
 1079.6
Larval Fat Body
 
 789.5
Larval Salivary Gland
 
 565.1
Larval Trachea
 
 1349.325
Larval Carcass
 
 798.85
Adult Head
 
 635.4
Adult Eye
 
 1289.35
Adult Brain
 
 1502.4
Adult Thoracic-Abdominal Ganglion
 
 1568.9
Adult Crop
 
 869.5
Adult Midgut
 
 443.4
Adult Hindgut
 
 751.4
Adult Malpighian Tubules
 
 475.7
Adult Fat Body
 
 447
Adult Salivary Gland
 
 672.7
Adult Heart
 
 1364.3
Adult VirginFemale Spermatheca
 
 587.4
Adult InseminatedFemale Spermatheca
 
 522.9
Adult Ovary
 
 858.2
Adult Testis
 
 347.7
Adult Male Accessory Gland
 
 547
Adult Carcass
 
 554
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (1522.4)
Larval Midgut
 638.4
Larval Hindgut
 (902.5)
Larval Malpighian Tubules
 (1079.6)
Larval Fat Body
 789.5
Larval Salivary Gland
 565.1
Larval Trachea
 (1349.325)
Larval Carcass
 798.85
Adult Head
 635.4
Adult Eye
 (1289.35)
Adult Brain
 (1502.4)
Adult Thoracic-Abdominal Ganglion
 (1568.9)
Adult Crop
 (869.5)
Adult Midgut
 
 443.4
Adult Hindgut
 751.4
Adult Malpighian Tubules
 
 475.7
Adult Fat Body
 
 447
Adult Salivary Gland
 672.7
Adult Heart
 (1364.3)
Adult VirginFemale Spermatheca
 587.4
Adult InseminatedFemale Spermatheca
 522.9
Adult Ovary
 (858.2)
Adult Testis
 
 347.7
Adult Male Accessory Gland
 547
Adult Carcass
 554
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 1522.4
Larval Midgut
 
 638.4
Larval Hindgut
 
 902.5
Larval Malpighian Tubules
 1079.6
Larval Fat Body
 
 789.5
Larval Salivary Gland
 
 565.1
Larval Trachea
 1349.325
Larval Carcass
 
 798.85
Adult Head
 
 635.4
Adult Eye
 1289.35
Adult Brain
 1502.4
Adult Thoracic-Abdominal Ganglion
 1568.9
Adult Crop
 
 869.5
Adult Midgut
 
 443.4
Adult Hindgut
 
 751.4
Adult Malpighian Tubules
 
 475.7
Adult Fat Body
 
 447
Adult Salivary Gland
 
 672.7
Adult Heart
 1364.3
Adult VirginFemale Spermatheca
 
 587.4
Adult InseminatedFemale Spermatheca
 
 522.9
Adult Ovary
 
 858.2
Adult Testis
 
 347.7
Adult Male Accessory Gland
 
 547
Adult Carcass
 
 554
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 1522.4
Larval Midgut
 
 638.4
Larval Hindgut
 
 902.5
Larval Malpighian Tubules
 
 1079.6
Larval Fat Body
 
 789.5
Larval Salivary Gland
 
 565.1
Larval Trachea
 
 1349.325
Larval Carcass
 
 798.85
Adult Head
 
 635.4
Adult Eye
 
 1289.35
Adult Brain
 
 1502.4
Adult Thoracic-Abdominal Ganglion
 
 1568.9
Adult Crop
 
 869.5
Adult Midgut
 
 443.4
Adult Hindgut
 
 751.4
Adult Malpighian Tubules
 
 475.7
Adult Fat Body
 
 447
Adult Salivary Gland
 
 672.7
Adult Heart
 
 1364.3
Adult VirginFemale Spermatheca
 
 587.4
Adult InseminatedFemale Spermatheca
 
 522.9
Adult Ovary
 
 858.2
Adult Testis
 
 347.7
Adult Male Accessory Gland
 
 547
Adult Carcass
 
 554
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 635.4
 
NA 
Eye
 
 1289.35
 
NA 
Brain
 
 1502.4
 
1522.4 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 1568.9
 
NA 
Crop
 
 869.5
 
638.4 
Midgut
 
 443.4
 
902.5 
Hindgut
 
 751.4
 
1079.6 
Malpighian Tubules
 
 475.7
 
789.5 
Fat Body
 
 447
 
565.1 
Salivary Gland
 
 672.7
 
NA 
Heart
 
 1364.3
 
1349.325 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 587.4
 
NA 
InseminatedFemale Spermatheca
 
 522.9
 
NA 
Ovary
 
 858.2
 
NA 
Testis
 
 347.7
 
NA 
Male Accessory Gland
 
 547
 
798.85 
Carcass
 
 554

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
embryonic neuroblast & spindle | germ-line clone
spindle & neuroblast
hide Classical Alleles ( 8 )
For All Classical Alleles Show

Allele of Gβ13FClassMutagenStocksKnown lesion
Gβ13FEP10711 Yes
Gβ13FKG084101 --
Gβ13Ff261
0 Yes
Gβ13FGG01564
0 --
Gβ13FGG01743
0 --
Gβ13Funspecified
0 --
Gβ13FΔ1-96A0 Yes
Gβ13FΔ150 Yes
hide Alleles Carried on Transgenic Constructs ( 9 )
For All Alleles Carried on Transgenic Constructs Show

Allele of Gβ13FClassMutagenStocksKnown lesion
Gβ13FGD70111 Yes
Gβ13FHMS014551 Yes
Gβ13FJF016091 Yes
Gβ13FKK1029231 Yes
Gβ13F+t9.80 Yes
Gβ13F+tSa0 Yes
Gβ13FScer\UAS.cFa0 Yes
Gβ13FScer\UAS.cHa0 Yes
Gβ13FScer\UAS.cUa0 Yes
hide Aneuploid Aberrations
Disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
UAS construct
characterization construct
Insertions
Type of insertions
Name
Expression data
miscellaneous insertions
hide Gene Ontology: Function, Process & Cellular Component ( 8 unique terms )
hide Terms Based on Experimental Evidence ( 4 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
inferred from mutant phenotype
inferred from mutant phenotype
Cellular Component
CV term
References
inferred from direct assay
hide Terms Based on Predictions or Assertions ( 4 terms )
Molecular Function
CV term
References
inferred from sequence or structural similarity with UniProtKB:O45040
non-traceable author statement
Biological Process
CV term
References
inferred from sequence or structural similarity with UniProtKB:O45040
non-traceable author statement
Cellular Component
CV term
References
inferred from sequence or structural similarity with UniProtKB:O45040
non-traceable author statement
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
Gβ13F allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 6 )
Bloomington
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 164 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for identity of: Gβ13F CG10545
Source for database merge of
Additional comments
"l(1)G0369" may affect "Gβ13F".
hide Other Comments
RNAi screen using dsRNA made from templates generated with primers directed against this gene causes a phenotype when assayed in Kc167 and S2R+ cells: increased or polarized (uneven) accumulation of F-actin.
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
dsRNA made from templates generated with primers against this gene tested in a cl-8 cell reporter assay to examine any role of Gβ13F in the hh signalling pathway.
Gβ13F mutant show defects in both spindle orientation and determinant localisation in neuroblasts.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 18 )
Reported As
Symbol Synonym
anon-EST:Liang-1.22
 
G-βb
 
Name Synonym
G protein beta-subunit 13F
G-protein β 13F
G protein β-subunit 13F
Secondary FlyBase IDs
hide References ( 77 )
Generate a list of
List References by type
hide Recent research papers ( 4 )
Boyle et al., 2010, Dev. Biol. 346(1): 68--79
Division of labor: Subsets of dorsal-appendage-forming cells control the shape of the entire tube. [FBrf0211761]
Egger-Adam and Katanaev, 2010, Dev. Dyn. 239(1): 168--183
The trimeric G protein Go inflicts a double impact on axin in the Wnt/frizzled signaling pathway. [FBrf0209618]
Katanayeva et al., 2010, PLoS ONE 5(8): e12331
Competing activities of heterotrimeric g proteins in Drosophila wing maturation. [FBrf0211718]
Kitajima et al., 2010, Dev. Biol. 347(1): 9--23
Progenitor properties of symmetrically dividing Drosophila neuroblasts during embryonic and larval development. [FBrf0211968]
hide Recent reviews (0)
All reviews listed in FlyBase were published before 2010