A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene Dmel\Gαs

General Information
SymbolDmel\GαsSpeciesD. melanogaster
NameG protein α s subunitAnnotation symbolCG2835
Feature typeprotein_coding_geneFlyBase IDFBgn0001123
Gene Model StatusCurrent Stock availability 13 publicly available
Also Known Ass, dgs, Gs, GSα, Gsα, G-salpha60A, dgsα, Gsα60A, G-sα60A
Genomic Location
Chromosome (arm)2RRecombination map
Cytogenetic map60A12-60A13Sequence location2R:19,830,064..19,834,459 [+]

Genomic Maps

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Automatically generated summary

See sections below for more information
The gene G protein α s subunit is referred to in FlyBase by the symbol Dmel\Gαs (CG2835, FBgn0001123). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: GTPase activity. There is experimental evidence that it is involved in the biological process: chaeta development; synaptic transmission; wing disc development; response to trehalose stimulus; sensory perception of sweet taste; neuromuscular junction development; imaginal disc-derived wing morphogenesis. 26 alleles are reported. The phenotypes of these alleles are annotated with: organ system; organ system subdivision; adult segment; multicellular structure; thoracic segment; gustatory sensory organ; integumentary specialisation; adult; synapse; distiproboscis; embryonic/larval fat body. It has 4 annotated transcripts and 4 annotated polypeptides. Protein features are: G protein alpha subunit, helical insertion; G-protein alpha subunit, group S; Guanine nucleotide binding protein (G-protein), alpha subunit. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 00-18 hour embryonic stages, during late larval stages, during early pupal stages. Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at high levels. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval fat body, larval/adult salivary gland, larval trachea, adult male accessory gland, larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult fat body, adult spermathecae, adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1639015_s_at completely aligns to an exonic region common to each of the 4 FlyBase-annotated transcript isoforms of G-salpha60A. Gene sequence location is 2R:19830064..19834459.

User Contributed Data
External Summaries
hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
Gα60A: G protein α subunit at 60A
Encodes a stimulatory G protein α subunit with high homology to mammalian Gsα that is responsible for the coupling of extracellular receptors to adenylate cyclase and an increase in the second messenger cAMP (Quan et al., 1989). The protein is expressed at low levels until completion of germband shortening; then high levels begin to be expressed in the neuropil (Wolfgang et al., 1990).
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Description
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FB2013_03
Alleles
FB2013_02
Controlled Vocabulary Terms
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
60A12-60A13  
Limits computationally determined from genome sequence between P{EP}TalEP489&P{EP}CG3065EP316 and P{lacW}Phmk07623&P{lacW}tsrk05633  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
60A-60A  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
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Please see the GBrowse view of Dmel\Gαs for information on other features GBrowse View Help
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0072141 FBtr0072142 FBtr0072144 FBtr0072143 FBtr0301411 FBtr0072209 FBtr0331981 FBpp0072050 FBpp0072052 FBpp0072051 FBpp0072053 FBpp0290625 FBpp0304306 FBpp0072118 FBti0125405_1 FBti0125405_2 FBti0102539 FBti0067200 FBti0067202 FBti0014144 FBti0026090 FBti0114857
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0072144
  1847
  382
FBtr0072143
  1856
  385
FBtr0072142
  1634
  382
FBtr0301411
  1630
  385
Additional Transcript Data & Comments
Reported size (kB)
1.9 (unknown)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0072053  
44.7  
382  
7.98  
FBpp0072052  
45.0  
385  
7.74  
FBpp0072051  
44.7  
382  
7.98  
FBpp0290625  
45.0  
385  
7.74  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
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Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
regulatory region
evidence=experimental
comment=DNA replication-related element (DRE)(TATCGATA) acts as a promoter activating element for the mus209 and DNApol-α180 genes.
regulatory region
comment=downstream basal promoter element
evidence=experimental
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Linkouts
Crossreferences
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hideTranscript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
RT-PCR
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
G-sα60A transcript of 1.9 kb appears in 2-6 hr embryos, and persists at constant levels through embryonic, larval and pupal stages.
G-sα60A transcript is detected predominantly in the adult head. In adult head sections, G-sα60A transcript localizes to the cortex of the brain, and to the eye.
RT-PCR analysis shows that G-sα60A transcripts are expressed in the adult head, third segment of the antenna and maxillary palps. The primers used are common to transcripts -RA, -RB and -RC of G-sα60A.
G-sα60A transcript of 1.9 kb appears in 2-6 hr embryos, and persists at constant levels through embryonic, larval and pupal stages.
Marker for
Subcellular Localization
CV Term
hide Polypeptide Expression
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
G-sα60A protein is associated with all cell membranes by germ band extension.
G-sα60A protein is expressed in the neurons and at the base of the olfactory sensilla of the third segment of the antenna. It co-localises with G-iα65A protein.
G-sα60A protein is detected in the cortex of follicle cells during oogenesis. Undetectable early in embryogenesis, it is detected after gastrulation, and is associated with all cell membranes by germ band extension.
Marker for
Subcellular Localization (GO Cellular Component)
CV term
References
inferred from direct assay
hide Expression Deduced from Reporters
hide High-Throughput Expression Data
Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
hide FlyAtlas Anatomy Microarray

FlyAtlas Anatomical Expression Data

(FlyAtlas-RNA.adult)

(FlyAtlas-RNA.larva)


   Styles
   Scales

Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at high levels. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval fat body, larval/adult salivary gland, larval trachea, adult male accessory gland, larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult fat body, adult spermathecae, adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (>999.999)

Linear, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 1055.025
Larval Midgut
 
 562.5
Larval Hindgut
 
 1016
Larval Malpighian Tubules
 
 815.1
Larval Fat Body
 
 580.8
Larval Salivary Gland
 
 843
Larval Trachea
 
 1488.5
Larval Carcass
 
 1332.925
Adult Head
 
 707
Adult Eye
 
 737.4
Adult Brain
 
 1451
Adult Thoracic-Abdominal Ganglion
 
 1314.4
Adult Crop
 
 1222.2
Adult Midgut
 
 589.2
Adult Hindgut
 
 897.8
Adult Malpighian Tubules
 
 727.3
Adult Fat Body
 
 399.1
Adult Salivary Gland
 
 846.8
Adult Heart
 
 660.8
Adult VirginFemale Spermatheca
 
 448
Adult InseminatedFemale Spermatheca
 
 463
Adult Ovary
 
 78.8
Adult Testis
 
 84
Adult Male Accessory Gland
 
 1270.9
Adult Carcass
 
 433.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (1055.025)
Larval Midgut
 (562.5)
Larval Hindgut
 (1016)
Larval Malpighian Tubules
 (815.1)
Larval Fat Body
 (580.8)
Larval Salivary Gland
 (843)
Larval Trachea
 (1488.5)
Larval Carcass
 (1332.925)
Adult Head
 (707)
Adult Eye
 (737.4)
Adult Brain
 (1451)
Adult Thoracic-Abdominal Ganglion
 (1314.4)
Adult Crop
 (1222.2)
Adult Midgut
 (589.2)
Adult Hindgut
 (897.8)
Adult Malpighian Tubules
 (727.3)
Adult Fat Body
 
 399.1
Adult Salivary Gland
 (846.8)
Adult Heart
 (660.8)
Adult VirginFemale Spermatheca
 
 448
Adult InseminatedFemale Spermatheca
 
 463
Adult Ovary
 
 78.8
Adult Testis
 
 84
Adult Male Accessory Gland
 (1270.9)
Adult Carcass
 
 433.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 1055.025
Larval Midgut
 
 562.5
Larval Hindgut
 1016
Larval Malpighian Tubules
 
 815.1
Larval Fat Body
 
 580.8
Larval Salivary Gland
 
 843
Larval Trachea
 (1488.5)
Larval Carcass
 (1332.925)
Adult Head
 
 707
Adult Eye
 
 737.4
Adult Brain
 (1451)
Adult Thoracic-Abdominal Ganglion
 (1314.4)
Adult Crop
 (1222.2)
Adult Midgut
 
 589.2
Adult Hindgut
 
 897.8
Adult Malpighian Tubules
 
 727.3
Adult Fat Body
 
 399.1
Adult Salivary Gland
 
 846.8
Adult Heart
 
 660.8
Adult VirginFemale Spermatheca
 
 448
Adult InseminatedFemale Spermatheca
 
 463
Adult Ovary
 
 78.8
Adult Testis
 
 84
Adult Male Accessory Gland
 (1270.9)
Adult Carcass
 
 433.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 1055.025
Larval Midgut
 
 562.5
Larval Hindgut
 
 1016
Larval Malpighian Tubules
 
 815.1
Larval Fat Body
 
 580.8
Larval Salivary Gland
 
 843
Larval Trachea
 
 1488.5
Larval Carcass
 
 1332.925
Adult Head
 
 707
Adult Eye
 
 737.4
Adult Brain
 
 1451
Adult Thoracic-Abdominal Ganglion
 
 1314.4
Adult Crop
 
 1222.2
Adult Midgut
 
 589.2
Adult Hindgut
 
 897.8
Adult Malpighian Tubules
 
 727.3
Adult Fat Body
 
 399.1
Adult Salivary Gland
 
 846.8
Adult Heart
 
 660.8
Adult VirginFemale Spermatheca
 
 448
Adult InseminatedFemale Spermatheca
 
 463
Adult Ovary
 
 78.8
Adult Testis
 
 84
Adult Male Accessory Gland
 
 1270.9
Adult Carcass
 
 433.4
Expression Level Scale
 Very high 
log, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 1055.025
Larval Midgut
 
 562.5
Larval Hindgut
 
 1016
Larval Malpighian Tubules
 
 815.1
Larval Fat Body
 
 580.8
Larval Salivary Gland
 
 843
Larval Trachea
 
 1488.5
Larval Carcass
 
 1332.925
Adult Head
 
 707
Adult Eye
 
 737.4
Adult Brain
 
 1451
Adult Thoracic-Abdominal Ganglion
 
 1314.4
Adult Crop
 
 1222.2
Adult Midgut
 
 589.2
Adult Hindgut
 
 897.8
Adult Malpighian Tubules
 
 727.3
Adult Fat Body
 
 399.1
Adult Salivary Gland
 
 846.8
Adult Heart
 
 660.8
Adult VirginFemale Spermatheca
 
 448
Adult InseminatedFemale Spermatheca
 
 463
Adult Ovary
 
 78.8
Adult Testis
 
 84
Adult Male Accessory Gland
 
 1270.9
Adult Carcass
 
 433.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (1055.025)
Larval Midgut
 562.5
Larval Hindgut
 (1016)
Larval Malpighian Tubules
 (815.1)
Larval Fat Body
 580.8
Larval Salivary Gland
 (843)
Larval Trachea
 (1488.5)
Larval Carcass
 (1332.925)
Adult Head
 707
Adult Eye
 737.4
Adult Brain
 (1451)
Adult Thoracic-Abdominal Ganglion
 (1314.4)
Adult Crop
 (1222.2)
Adult Midgut
 589.2
Adult Hindgut
 (897.8)
Adult Malpighian Tubules
 727.3
Adult Fat Body
 
 399.1
Adult Salivary Gland
 (846.8)
Adult Heart
 660.8
Adult VirginFemale Spermatheca
 
 448
Adult InseminatedFemale Spermatheca
 
 463
Adult Ovary
 
 78.8
Adult Testis
 
 84
Adult Male Accessory Gland
 (1270.9)
Adult Carcass
 
 433.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 1055.025
Larval Midgut
 
 562.5
Larval Hindgut
 1016
Larval Malpighian Tubules
 
 815.1
Larval Fat Body
 
 580.8
Larval Salivary Gland
 
 843
Larval Trachea
 1488.5
Larval Carcass
 1332.925
Adult Head
 
 707
Adult Eye
 
 737.4
Adult Brain
 1451
Adult Thoracic-Abdominal Ganglion
 1314.4
Adult Crop
 1222.2
Adult Midgut
 
 589.2
Adult Hindgut
 
 897.8
Adult Malpighian Tubules
 
 727.3
Adult Fat Body
 
 399.1
Adult Salivary Gland
 
 846.8
Adult Heart
 
 660.8
Adult VirginFemale Spermatheca
 
 448
Adult InseminatedFemale Spermatheca
 
 463
Adult Ovary
 
 78.8
Adult Testis
 
 84
Adult Male Accessory Gland
 1270.9
Adult Carcass
 
 433.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 1055.025
Larval Midgut
 
 562.5
Larval Hindgut
 
 1016
Larval Malpighian Tubules
 
 815.1
Larval Fat Body
 
 580.8
Larval Salivary Gland
 
 843
Larval Trachea
 
 1488.5
Larval Carcass
 
 1332.925
Adult Head
 
 707
Adult Eye
 
 737.4
Adult Brain
 
 1451
Adult Thoracic-Abdominal Ganglion
 
 1314.4
Adult Crop
 
 1222.2
Adult Midgut
 
 589.2
Adult Hindgut
 
 897.8
Adult Malpighian Tubules
 
 727.3
Adult Fat Body
 
 399.1
Adult Salivary Gland
 
 846.8
Adult Heart
 
 660.8
Adult VirginFemale Spermatheca
 
 448
Adult InseminatedFemale Spermatheca
 
 463
Adult Ovary
 
 78.8
Adult Testis
 
 84
Adult Male Accessory Gland
 
 1270.9
Adult Carcass
 
 433.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 707
 
NA 
Eye
 
 737.4
 
NA 
Brain
 
 1451
 
1055.025 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 1314.4
 
NA 
Crop
 
 1222.2
 
562.5 
Midgut
 
 589.2
 
1016 
Hindgut
 
 897.8
 
815.1 
Malpighian Tubules
 
 727.3
 
580.8 
Fat Body
 
 399.1
 
843 
Salivary Gland
 
 846.8
 
NA 
Heart
 
 660.8
 
1488.5 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 448
 
NA 
InseminatedFemale Spermatheca
 
 463
 
NA 
Ovary
 
 78.8
 
NA 
Testis
 
 84
 
NA 
Male Accessory Gland
 
 1270.9
 
1332.925 
Carcass
 
 433.4

FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 42
central nervous system, larvae L3
 
 54
central nervous system, pupae P8
 
 76
head, virgin 1-day female
 
 31
head, virgin 4-day female
 
 28
head, virgin 20-day female
 
 23
head, mated 1-day female
 
 19
head, mated 4-day female
 
 24
head, mated 20-day female
 
 21
head, mated 1-day male
 
 39
head, mated 4-day male
 
 40
head, mated 20-day male
 
 34
salivary gland, larvae L3 wandering
 
 12
salivary gland, white prepupae
 
 41
digestive system, larvae L3 wandering
 
 33
digestive system, 1-day adult
 
 16
digestive system, 4-day adult
 
 16
digestive system, 20-day adult
 
 15
fat body, larvae L3 wandering
 
 8
fat body, white prepupae
 
 24
fat body, pupae P8
 
 28
carcass, larvae L3 wandering
 
 48
carcass, 1-day adult
 
 15
carcass, 4-day adult
 
 16
carcass, 20-day adult
 
 17
ovary, virgin 4-day female
 
 3
ovary, mated 4-day female
 
 2
testis, mated 4-day male
 
 11
accessory gland, mated 4-day male
 
 19
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 (42)
central nervous system, larvae L3
 (54)
central nervous system, pupae P8
 (76)
head, virgin 1-day female
 (31)
head, virgin 4-day female
 (28)
head, virgin 20-day female
 
 23
head, mated 1-day female
 
 19
head, mated 4-day female
 
 24
head, mated 20-day female
 
 21
head, mated 1-day male
 (39)
head, mated 4-day male
 (40)
head, mated 20-day male
 (34)
salivary gland, larvae L3 wandering
 
 12
salivary gland, white prepupae
 (41)
digestive system, larvae L3 wandering
 (33)
digestive system, 1-day adult
 
 16
digestive system, 4-day adult
 
 16
digestive system, 20-day adult
 
 15
fat body, larvae L3 wandering
 
 8
fat body, white prepupae
 
 24
fat body, pupae P8
 (28)
carcass, larvae L3 wandering
 (48)
carcass, 1-day adult
 
 15
carcass, 4-day adult
 
 16
carcass, 20-day adult
 
 17
ovary, virgin 4-day female
 
 3
ovary, mated 4-day female
 
 2
testis, mated 4-day male
 
 11
accessory gland, mated 4-day male
 
 19
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 42
central nervous system, larvae L3
 
 54
central nervous system, pupae P8
 
 76
head, virgin 1-day female
 
 31
head, virgin 4-day female
 
 28
head, virgin 20-day female
 
 23
head, mated 1-day female
 
 19
head, mated 4-day female
 
 24
head, mated 20-day female
 
 21
head, mated 1-day male
 
 39
head, mated 4-day male
 
 40
head, mated 20-day male
 
 34
salivary gland, larvae L3 wandering
 
 12
salivary gland, white prepupae
 
 41
digestive system, larvae L3 wandering
 
 33
digestive system, 1-day adult
 
 16
digestive system, 4-day adult
 
 16
digestive system, 20-day adult
 
 15
fat body, larvae L3 wandering
 
 8
fat body, white prepupae
 
 24
fat body, pupae P8
 
 28
carcass, larvae L3 wandering
 
 48
carcass, 1-day adult
 
 15
carcass, 4-day adult
 
 16
carcass, 20-day adult
 
 17
ovary, virgin 4-day female
 
 3
ovary, mated 4-day female
 
 2
testis, mated 4-day male
 
 11
accessory gland, mated 4-day male
 
 19
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 42
central nervous system, larvae L3
 
 54
central nervous system, pupae P8
 
 76
head, virgin 1-day female
 
 31
head, virgin 4-day female
 
 28
head, virgin 20-day female
 
 23
head, mated 1-day female
 
 19
head, mated 4-day female
 
 24
head, mated 20-day female
 
 21
head, mated 1-day male
 
 39
head, mated 4-day male
 
 40
head, mated 20-day male
 
 34
salivary gland, larvae L3 wandering
 
 12
salivary gland, white prepupae
 
 41
digestive system, larvae L3 wandering
 
 33
digestive system, 1-day adult
 
 16
digestive system, 4-day adult
 
 16
digestive system, 20-day adult
 
 15
fat body, larvae L3 wandering
 
 8
fat body, white prepupae
 
 24
fat body, pupae P8
 
 28
carcass, larvae L3 wandering
 
 48
carcass, 1-day adult
 
 15
carcass, 4-day adult
 
 16
carcass, 20-day adult
 
 17
ovary, virgin 4-day female
 
 3
ovary, mated 4-day female
 
 2
testis, mated 4-day male
 
 11
accessory gland, mated 4-day male
 
 19
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 42
central nervous system, larvae L3
 
 54
central nervous system, pupae P8
 
 76
head, virgin 1-day female
 
 31
head, virgin 4-day female
 
 28
head, virgin 20-day female
 
 23
head, mated 1-day female
 
 19
head, mated 4-day female
 
 24
head, mated 20-day female
 
 21
head, mated 1-day male
 
 39
head, mated 4-day male
 
 40
head, mated 20-day male
 
 34
salivary gland, larvae L3 wandering
 
 12
salivary gland, white prepupae
 
 41
digestive system, larvae L3 wandering
 
 33
digestive system, 1-day adult
 
 16
digestive system, 4-day adult
 
 16
digestive system, 20-day adult
 
 15
fat body, larvae L3 wandering
 
 8
fat body, white prepupae
 
 24
fat body, pupae P8
 
 28
carcass, larvae L3 wandering
 
 48
carcass, 1-day adult
 
 15
carcass, 4-day adult
 
 16
carcass, 20-day adult
 
 17
ovary, virgin 4-day female
 
 3
ovary, mated 4-day female
 
 2
testis, mated 4-day male
 
 11
accessory gland, mated 4-day male
 
 19
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 (42)
central nervous system, larvae L3
 (54)
central nervous system, pupae P8
 (76)
head, virgin 1-day female
 31
head, virgin 4-day female
 28
head, virgin 20-day female
 
 23
head, mated 1-day female
 
 19
head, mated 4-day female
 
 24
head, mated 20-day female
 
 21
head, mated 1-day male
 (39)
head, mated 4-day male
 (40)
head, mated 20-day male
 (34)
salivary gland, larvae L3 wandering
 
 12
salivary gland, white prepupae
 (41)
digestive system, larvae L3 wandering
 (33)
digestive system, 1-day adult
 
 16
digestive system, 4-day adult
 
 16
digestive system, 20-day adult
 
 15
fat body, larvae L3 wandering
 
 8
fat body, white prepupae
 
 24
fat body, pupae P8
 28
carcass, larvae L3 wandering
 (48)
carcass, 1-day adult
 
 15
carcass, 4-day adult
 
 16
carcass, 20-day adult
 
 17
ovary, virgin 4-day female
 
 3
ovary, mated 4-day female
 
 2
testis, mated 4-day male
 
 11
accessory gland, mated 4-day male
 
 19
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 42
central nervous system, larvae L3
 
 54
central nervous system, pupae P8
 
 76
head, virgin 1-day female
 
 31
head, virgin 4-day female
 
 28
head, virgin 20-day female
 
 23
head, mated 1-day female
 
 19
head, mated 4-day female
 
 24
head, mated 20-day female
 
 21
head, mated 1-day male
 
 39
head, mated 4-day male
 
 40
head, mated 20-day male
 
 34
salivary gland, larvae L3 wandering
 
 12
salivary gland, white prepupae
 
 41
digestive system, larvae L3 wandering
 
 33
digestive system, 1-day adult
 
 16
digestive system, 4-day adult
 
 16
digestive system, 20-day adult
 
 15
fat body, larvae L3 wandering
 
 8
fat body, white prepupae
 
 24
fat body, pupae P8
 
 28
carcass, larvae L3 wandering
 
 48
carcass, 1-day adult
 
 15
carcass, 4-day adult
 
 16
carcass, 20-day adult
 
 17
ovary, virgin 4-day female
 
 3
ovary, mated 4-day female
 
 2
testis, mated 4-day male
 
 11
accessory gland, mated 4-day male
 
 19
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 42
central nervous system, larvae L3
 
 54
central nervous system, pupae P8
 
 76
head, virgin 1-day female
 
 31
head, virgin 4-day female
 
 28
head, virgin 20-day female
 
 23
head, mated 1-day female
 
 19
head, mated 4-day female
 
 24
head, mated 20-day female
 
 21
head, mated 1-day male
 
 39
head, mated 4-day male
 
 40
head, mated 20-day male
 
 34
salivary gland, larvae L3 wandering
 
 12
salivary gland, white prepupae
 
 41
digestive system, larvae L3 wandering
 
 33
digestive system, 1-day adult
 
 16
digestive system, 4-day adult
 
 16
digestive system, 20-day adult
 
 15
fat body, larvae L3 wandering
 
 8
fat body, white prepupae
 
 24
fat body, pupae P8
 
 28
carcass, larvae L3 wandering
 
 48
carcass, 1-day adult
 
 15
carcass, 4-day adult
 
 16
carcass, 20-day adult
 
 17
ovary, virgin 4-day female
 
 3
ovary, mated 4-day female
 
 2
testis, mated 4-day male
 
 11
accessory gland, mated 4-day male
 
 19
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 
central nervous system, larvae L3
 
 
central nervous system, pupae P8
 
 
head, virgin 1-day female
 
 
head, virgin 4-day female
 
 
head, virgin 20-day female
 
 
head, mated 1-day female
 
 
head, mated 4-day female
 
 
head, mated 20-day female
 
 
head, mated 1-day male
 
 
head, mated 4-day male
 
 
head, mated 20-day male
 
 
salivary gland, larvae L3 wandering
 
 
salivary gland, white prepupae
 
 
digestive system, larvae L3 wandering
 
 
digestive system, 1-day adult
 
 
digestive system, 4-day adult
 
 
digestive system, 20-day adult
 
 
fat body, larvae L3 wandering
 
 
fat body, white prepupae
 
 
fat body, pupae P8
 
 
carcass, larvae L3 wandering
 
 
carcass, 1-day adult
 
 
carcass, 4-day adult
 
 
carcass, 20-day adult
 
 
ovary, virgin 4-day female
 
 
ovary, mated 4-day female
 
 
testis, mated 4-day male
 
 
accessory gland, mated 4-day male
 
 

hide modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)


   Styles
   Scales

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 00-18 hour embryonic stages, during late larval stages, during early pupal stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 2
embryo 02-04hr
 
 22
embryo 04-06hr
 
 57
embryo 06-08hr
 
 50
embryo 08-10hr
 
 54
embryo 10-12hr
 
 43
embryo 12-14hr
 
 71
embryo 14-16hr
 
 24
embryo 16-18hr
 
 37
embryo 18-20hr
 
 34
embryo 20-22hr
 
 29
embryo 22-24hr
 
 41
larva L1
 
 25
larva L2
 
 31
larva L3 12hr old
 
 26
larva L3 puffstage 1-2
 
 29
larva L3 puffstage 3-6
 
 37
larva L3 puffstage 7-9
 
 53
white prepupae new
 
 53
white prepupae 12hr
 
 49
white prepupae 24hr
 
 55
pupae 2d postWPP
 
 49
pupae 3d postWPP
 
 33
pupae 4d postWPP
 
 17
adult male 01day
 
 20
adult male 05day
 
 15
adult male 30day
 
 12
adult female 01day
 
 9
adult female 05day
 
 8
adult female 30day
 
 7
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 2
embryo 02-04hr
 
 22
embryo 04-06hr
 (57)
embryo 06-08hr
 (50)
embryo 08-10hr
 (54)
embryo 10-12hr
 (43)
embryo 12-14hr
 (71)
embryo 14-16hr
 
 24
embryo 16-18hr
 (37)
embryo 18-20hr
 (34)
embryo 20-22hr
 (29)
embryo 22-24hr
 (41)
larva L1
 
 25
larva L2
 (31)
larva L3 12hr old
 26
larva L3 puffstage 1-2
 (29)
larva L3 puffstage 3-6
 (37)
larva L3 puffstage 7-9
 (53)
white prepupae new
 (53)
white prepupae 12hr
 (49)
white prepupae 24hr
 (55)
pupae 2d postWPP
 (49)
pupae 3d postWPP
 (33)
pupae 4d postWPP
 
 17
adult male 01day
 
 20
adult male 05day
 
 15
adult male 30day
 
 12
adult female 01day
 
 9
adult female 05day
 
 8
adult female 30day
 
 7
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 2
embryo 02-04hr
 
 22
embryo 04-06hr
 
 57
embryo 06-08hr
 
 50
embryo 08-10hr
 
 54
embryo 10-12hr
 
 43
embryo 12-14hr
 
 71
embryo 14-16hr
 
 24
embryo 16-18hr
 
 37
embryo 18-20hr
 
 34
embryo 20-22hr
 
 29
embryo 22-24hr
 
 41
larva L1
 
 25
larva L2
 
 31
larva L3 12hr old
 
 26
larva L3 puffstage 1-2
 
 29
larva L3 puffstage 3-6
 
 37
larva L3 puffstage 7-9
 
 53
white prepupae new
 
 53
white prepupae 12hr
 
 49
white prepupae 24hr
 
 55
pupae 2d postWPP
 
 49
pupae 3d postWPP
 
 33
pupae 4d postWPP
 
 17
adult male 01day
 
 20
adult male 05day
 
 15
adult male 30day
 
 12
adult female 01day
 
 9
adult female 05day
 
 8
adult female 30day
 
 7
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 2
embryo 02-04hr
 
 22
embryo 04-06hr
 
 57
embryo 06-08hr
 
 50
embryo 08-10hr
 
 54
embryo 10-12hr
 
 43
embryo 12-14hr
 
 71
embryo 14-16hr
 
 24
embryo 16-18hr
 
 37
embryo 18-20hr
 
 34
embryo 20-22hr
 
 29
embryo 22-24hr
 
 41
larva L1
 
 25
larva L2
 
 31
larva L3 12hr old
 
 26
larva L3 puffstage 1-2
 
 29
larva L3 puffstage 3-6
 
 37
larva L3 puffstage 7-9
 
 53
white prepupae new
 
 53
white prepupae 12hr
 
 49
white prepupae 24hr
 
 55
pupae 2d postWPP
 
 49
pupae 3d postWPP
 
 33
pupae 4d postWPP
 
 17
adult male 01day
 
 20
adult male 05day
 
 15
adult male 30day
 
 12
adult female 01day
 
 9
adult female 05day
 
 8
adult female 30day
 
 7
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 2
embryo 02-04hr
 
 22
embryo 04-06hr
 
 57
embryo 06-08hr
 
 50
embryo 08-10hr
 
 54
embryo 10-12hr
 
 43
embryo 12-14hr
 
 71
embryo 14-16hr
 
 24
embryo 16-18hr
 
 37
embryo 18-20hr
 
 34
embryo 20-22hr
 
 29
embryo 22-24hr
 
 41
larva L1
 
 25
larva L2
 
 31
larva L3 12hr old
 
 26
larva L3 puffstage 1-2
 
 29
larva L3 puffstage 3-6
 
 37
larva L3 puffstage 7-9
 
 53
white prepupae new
 
 53
white prepupae 12hr
 
 49
white prepupae 24hr
 
 55
pupae 2d postWPP
 
 49
pupae 3d postWPP
 
 33
pupae 4d postWPP
 
 17
adult male 01day
 
 20
adult male 05day
 
 15
adult male 30day
 
 12
adult female 01day
 
 9
adult female 05day
 
 8
adult female 30day
 
 7
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 2
embryo 02-04hr
 
 22
embryo 04-06hr
 (57)
embryo 06-08hr
 (50)
embryo 08-10hr
 (54)
embryo 10-12hr
 (43)
embryo 12-14hr
 (71)
embryo 14-16hr
 
 24
embryo 16-18hr
 (37)
embryo 18-20hr
 (34)
embryo 20-22hr
 29
embryo 22-24hr
 (41)
larva L1
 
 25
larva L2
 31
larva L3 12hr old
 26
larva L3 puffstage 1-2
 29
larva L3 puffstage 3-6
 (37)
larva L3 puffstage 7-9
 (53)
white prepupae new
 (53)
white prepupae 12hr
 (49)
white prepupae 24hr
 (55)
pupae 2d postWPP
 (49)
pupae 3d postWPP
 (33)
pupae 4d postWPP
 
 17
adult male 01day
 
 20
adult male 05day
 
 15
adult male 30day
 
 12
adult female 01day
 
 9
adult female 05day
 
 8
adult female 30day
 
 7
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 2
embryo 02-04hr
 
 22
embryo 04-06hr
 
 57
embryo 06-08hr
 
 50
embryo 08-10hr
 
 54
embryo 10-12hr
 
 43
embryo 12-14hr
 
 71
embryo 14-16hr
 
 24
embryo 16-18hr
 
 37
embryo 18-20hr
 
 34
embryo 20-22hr
 
 29
embryo 22-24hr
 
 41
larva L1
 
 25
larva L2
 
 31
larva L3 12hr old
 
 26
larva L3 puffstage 1-2
 
 29
larva L3 puffstage 3-6
 
 37
larva L3 puffstage 7-9
 
 53
white prepupae new
 
 53
white prepupae 12hr
 
 49
white prepupae 24hr
 
 55
pupae 2d postWPP
 
 49
pupae 3d postWPP
 
 33
pupae 4d postWPP
 
 17
adult male 01day
 
 20
adult male 05day
 
 15
adult male 30day
 
 12
adult female 01day
 
 9
adult female 05day
 
 8
adult female 30day
 
 7
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 2
embryo 02-04hr
 
 22
embryo 04-06hr
 
 57
embryo 06-08hr
 
 50
embryo 08-10hr
 
 54
embryo 10-12hr
 
 43
embryo 12-14hr
 
 71
embryo 14-16hr
 
 24
embryo 16-18hr
 
 37
embryo 18-20hr
 
 34
embryo 20-22hr
 
 29
embryo 22-24hr
 
 41
larva L1
 
 25
larva L2
 
 31
larva L3 12hr old
 
 26
larva L3 puffstage 1-2
 
 29
larva L3 puffstage 3-6
 
 37
larva L3 puffstage 7-9
 
 53
white prepupae new
 
 53
white prepupae 12hr
 
 49
white prepupae 24hr
 
 55
pupae 2d postWPP
 
 49
pupae 3d postWPP
 
 33
pupae 4d postWPP
 
 17
adult male 01day
 
 20
adult male 05day
 
 15
adult male 30day
 
 12
adult female 01day
 
 9
adult female 05day
 
 8
adult female 30day
 
 7
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

modENCODE Temporal Expression Data (Graveley et al., 2011)
hide modENCODE Cell Lines RNA-Seq

modENCODE Cell Line Expression Data

(modENCODE_mRNA-Seq_cell.A)

(modENCODE_mRNA-Seq_cell.B)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 68
Schneider line 2 Sg4
 
 25
embryonic 1182-4H
 
 35
embryonic GM2
 
 45
embryonic Kc167
 
 43
embryonic S1
 
 57
embryonic S3
 
 63
leg disc CME L1
 
 33
wing disc CME-W2
 
 47
wing disc ML-DmD8
 
 48
wing disc ML-DmD9
 
 34
wing disc ML-DmD16-c3
 
 33
wing disc ML-DmD21
 
 22
wing disc ML-DmD32
 
 19
haltere disc ML-DmD17-c3
 
 62
eye-antennal disc ML-DmD11
 
 27
antennal disc ML-DmD20-c5
 
 31
mixed discs ML-DmD4-c1
 
 22
CNS ML-DmBG1-c1
 
 33
CNS ML-DmBG2-c2
 
 29
tumorous blood cells mbn2
 
 48
ovary fGS/OSS
 
 30
ovary OSC
 
 39
ovary OSS
 
 17
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 (68)
Schneider line 2 Sg4
 
 25
embryonic 1182-4H
 (35)
embryonic GM2
 (45)
embryonic Kc167
 (43)
embryonic S1
 (57)
embryonic S3
 (63)
leg disc CME L1
 (33)
wing disc CME-W2
 (47)
wing disc ML-DmD8
 (48)
wing disc ML-DmD9
 (34)
wing disc ML-DmD16-c3
 (33)
wing disc ML-DmD21
 
 22
wing disc ML-DmD32
 
 19
haltere disc ML-DmD17-c3
 (62)
eye-antennal disc ML-DmD11
 (27)
antennal disc ML-DmD20-c5
 (31)
mixed discs ML-DmD4-c1
 
 22
CNS ML-DmBG1-c1
 (33)
CNS ML-DmBG2-c2
 (29)
tumorous blood cells mbn2
 (48)
ovary fGS/OSS
 (30)
ovary OSC
 (39)
ovary OSS
 
 17
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 68
Schneider line 2 Sg4
 
 25
embryonic 1182-4H
 
 35
embryonic GM2
 
 45
embryonic Kc167
 
 43
embryonic S1
 
 57
embryonic S3
 
 63
leg disc CME L1
 
 33
wing disc CME-W2
 
 47
wing disc ML-DmD8
 
 48
wing disc ML-DmD9
 
 34
wing disc ML-DmD16-c3
 
 33
wing disc ML-DmD21
 
 22
wing disc ML-DmD32
 
 19
haltere disc ML-DmD17-c3
 
 62
eye-antennal disc ML-DmD11
 
 27
antennal disc ML-DmD20-c5
 
 31
mixed discs ML-DmD4-c1
 
 22
CNS ML-DmBG1-c1
 
 33
CNS ML-DmBG2-c2
 
 29
tumorous blood cells mbn2
 
 48
ovary fGS/OSS
 
 30
ovary OSC
 
 39
ovary OSS
 
 17
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 68
Schneider line 2 Sg4
 
 25
embryonic 1182-4H
 
 35
embryonic GM2
 
 45
embryonic Kc167
 
 43
embryonic S1
 
 57
embryonic S3
 
 63
leg disc CME L1
 
 33
wing disc CME-W2
 
 47
wing disc ML-DmD8
 
 48
wing disc ML-DmD9
 
 34
wing disc ML-DmD16-c3
 
 33
wing disc ML-DmD21
 
 22
wing disc ML-DmD32
 
 19
haltere disc ML-DmD17-c3
 
 62
eye-antennal disc ML-DmD11
 
 27
antennal disc ML-DmD20-c5
 
 31
mixed discs ML-DmD4-c1
 
 22
CNS ML-DmBG1-c1
 
 33
CNS ML-DmBG2-c2
 
 29
tumorous blood cells mbn2
 
 48
ovary fGS/OSS
 
 30
ovary OSC
 
 39
ovary OSS
 
 17
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 68
Schneider line 2 Sg4
 
 25
embryonic 1182-4H
 
 35
embryonic GM2
 
 45
embryonic Kc167
 
 43
embryonic S1
 
 57
embryonic S3
 
 63
leg disc CME L1
 
 33
wing disc CME-W2
 
 47
wing disc ML-DmD8
 
 48
wing disc ML-DmD9
 
 34
wing disc ML-DmD16-c3
 
 33
wing disc ML-DmD21
 
 22
wing disc ML-DmD32
 
 19
haltere disc ML-DmD17-c3
 
 62
eye-antennal disc ML-DmD11
 
 27
antennal disc ML-DmD20-c5
 
 31
mixed discs ML-DmD4-c1
 
 22
CNS ML-DmBG1-c1
 
 33
CNS ML-DmBG2-c2
 
 29
tumorous blood cells mbn2
 
 48
ovary fGS/OSS
 
 30
ovary OSC
 
 39
ovary OSS
 
 17
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 (68)
Schneider line 2 Sg4
 
 25
embryonic 1182-4H
 (35)
embryonic GM2
 (45)
embryonic Kc167
 (43)
embryonic S1
 (57)
embryonic S3
 (63)
leg disc CME L1
 (33)
wing disc CME-W2
 (47)
wing disc ML-DmD8
 (48)
wing disc ML-DmD9
 (34)
wing disc ML-DmD16-c3
 (33)
wing disc ML-DmD21
 
 22
wing disc ML-DmD32
 
 19
haltere disc ML-DmD17-c3
 (62)
eye-antennal disc ML-DmD11
 27
antennal disc ML-DmD20-c5
 31
mixed discs ML-DmD4-c1
 
 22
CNS ML-DmBG1-c1
 (33)
CNS ML-DmBG2-c2
 29
tumorous blood cells mbn2
 (48)
ovary fGS/OSS
 30
ovary OSC
 (39)
ovary OSS
 
 17
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 68
Schneider line 2 Sg4
 
 25
embryonic 1182-4H
 
 35
embryonic GM2
 
 45
embryonic Kc167
 
 43
embryonic S1
 
 57
embryonic S3
 
 63
leg disc CME L1
 
 33
wing disc CME-W2
 
 47
wing disc ML-DmD8
 
 48
wing disc ML-DmD9
 
 34
wing disc ML-DmD16-c3
 
 33
wing disc ML-DmD21
 
 22
wing disc ML-DmD32
 
 19
haltere disc ML-DmD17-c3
 
 62
eye-antennal disc ML-DmD11
 
 27
antennal disc ML-DmD20-c5
 
 31
mixed discs ML-DmD4-c1
 
 22
CNS ML-DmBG1-c1
 
 33
CNS ML-DmBG2-c2
 
 29
tumorous blood cells mbn2
 
 48
ovary fGS/OSS
 
 30
ovary OSC
 
 39
ovary OSS
 
 17
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 68
Schneider line 2 Sg4
 
 25
embryonic 1182-4H
 
 35
embryonic GM2
 
 45
embryonic Kc167
 
 43
embryonic S1
 
 57
embryonic S3
 
 63
leg disc CME L1
 
 33
wing disc CME-W2
 
 47
wing disc ML-DmD8
 
 48
wing disc ML-DmD9
 
 34
wing disc ML-DmD16-c3
 
 33
wing disc ML-DmD21
 
 22
wing disc ML-DmD32
 
 19
haltere disc ML-DmD17-c3
 
 62
eye-antennal disc ML-DmD11
 
 27
antennal disc ML-DmD20-c5
 
 31
mixed discs ML-DmD4-c1
 
 22
CNS ML-DmBG1-c1
 
 33
CNS ML-DmBG2-c2
 
 29
tumorous blood cells mbn2
 
 48
ovary fGS/OSS
 
 30
ovary OSC
 
 39
ovary OSS
 
 17
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Cell Line   Expression Level
Schneider line 2 S2R+
 
 
Schneider line 2 Sg4
 
 
embryonic 1182-4H
 
 
embryonic GM2
 
 
embryonic Kc167
 
 
embryonic S1
 
 
embryonic S3
 
 
leg disc CME L1
 
 
wing disc CME-W2
 
 
wing disc ML-DmD8
 
 
wing disc ML-DmD9
 
 
wing disc ML-DmD16-c3
 
 
wing disc ML-DmD21
 
 
wing disc ML-DmD32
 
 
haltere disc ML-DmD17-c3
 
 
eye-antennal disc ML-DmD11
 
 
antennal disc ML-DmD20-c5
 
 
mixed discs ML-DmD4-c1
 
 
CNS ML-DmBG1-c1
 
 
CNS ML-DmBG2-c2
 
 
tumorous blood cells mbn2
 
 
ovary fGS/OSS
 
 
ovary OSC
 
 
ovary OSS
 
 

hide modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 12
cold shock, 4-day adult
 
 10
heat shock, 4-day adult
 
 20
Cadmium 50 mM 6 hrs, larvae L3
 
 27
Cadmium 50 mM 12 hrs, larvae L3
 
 52
Cadmium 50 mM 48 hrs, 4-day adult
 
 22
Cadmium 100 mM 48 hrs, 4-day adult
 
 9
Copper 0.5 mM 12 hrs, larvae L3
 
 16
Copper 15 mM 48 hrs, 4-day adult
 
 17
Zinc 5 mM 12 hrs, larvae L3
 
 13
Zinc 4.5 mM 48 hrs, 4-day adult
 
 17
Ethanol 2.5% 3 hrs, larvae L3
 
 9
Ethanol 5% 3 hrs, larvae L3
 
 40
Ethanol 10% 3 hrs, larvae L3
 
 29
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 31
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 11
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 8
Paraquat 5 mM 48 hrs, 4-day adult
 
 13
Paraquat 10 mM 48 hrs, 4-day adult
 
 13
Rotenone 2 μg 12 hrs, larvae L3
 
 36
Rotenone 8 μg 12 hrs, larvae L3
 
 33
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 12
cold shock, 4-day adult
 
 10
heat shock, 4-day adult
 
 20
Cadmium 50 mM 6 hrs, larvae L3
 (27)
Cadmium 50 mM 12 hrs, larvae L3
 (52)
Cadmium 50 mM 48 hrs, 4-day adult
 
 22
Cadmium 100 mM 48 hrs, 4-day adult
 
 9
Copper 0.5 mM 12 hrs, larvae L3
 
 16
Copper 15 mM 48 hrs, 4-day adult
 
 17
Zinc 5 mM 12 hrs, larvae L3
 
 13
Zinc 4.5 mM 48 hrs, 4-day adult
 
 17
Ethanol 2.5% 3 hrs, larvae L3
 
 9
Ethanol 5% 3 hrs, larvae L3
 (40)
Ethanol 10% 3 hrs, larvae L3
 (29)
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 (31)
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 11
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 8
Paraquat 5 mM 48 hrs, 4-day adult
 
 13
Paraquat 10 mM 48 hrs, 4-day adult
 
 13
Rotenone 2 μg 12 hrs, larvae L3
 (36)
Rotenone 8 μg 12 hrs, larvae L3
 (33)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 12
cold shock, 4-day adult
 
 10
heat shock, 4-day adult
 
 20
Cadmium 50 mM 6 hrs, larvae L3
 
 27
Cadmium 50 mM 12 hrs, larvae L3
 
 52
Cadmium 50 mM 48 hrs, 4-day adult
 
 22
Cadmium 100 mM 48 hrs, 4-day adult
 
 9
Copper 0.5 mM 12 hrs, larvae L3
 
 16
Copper 15 mM 48 hrs, 4-day adult
 
 17
Zinc 5 mM 12 hrs, larvae L3
 
 13
Zinc 4.5 mM 48 hrs, 4-day adult
 
 17
Ethanol 2.5% 3 hrs, larvae L3
 
 9
Ethanol 5% 3 hrs, larvae L3
 
 40
Ethanol 10% 3 hrs, larvae L3
 
 29
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 31
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 11
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 8
Paraquat 5 mM 48 hrs, 4-day adult
 
 13
Paraquat 10 mM 48 hrs, 4-day adult
 
 13
Rotenone 2 μg 12 hrs, larvae L3
 
 36
Rotenone 8 μg 12 hrs, larvae L3
 
 33
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 12
cold shock, 4-day adult
 
 10
heat shock, 4-day adult
 
 20
Cadmium 50 mM 6 hrs, larvae L3
 
 27
Cadmium 50 mM 12 hrs, larvae L3
 
 52
Cadmium 50 mM 48 hrs, 4-day adult
 
 22
Cadmium 100 mM 48 hrs, 4-day adult
 
 9
Copper 0.5 mM 12 hrs, larvae L3
 
 16
Copper 15 mM 48 hrs, 4-day adult
 
 17
Zinc 5 mM 12 hrs, larvae L3
 
 13
Zinc 4.5 mM 48 hrs, 4-day adult
 
 17
Ethanol 2.5% 3 hrs, larvae L3
 
 9
Ethanol 5% 3 hrs, larvae L3
 
 40
Ethanol 10% 3 hrs, larvae L3
 
 29
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 31
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 11
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 8
Paraquat 5 mM 48 hrs, 4-day adult
 
 13
Paraquat 10 mM 48 hrs, 4-day adult
 
 13
Rotenone 2 μg 12 hrs, larvae L3
 
 36
Rotenone 8 μg 12 hrs, larvae L3
 
 33
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 12
cold shock, 4-day adult
 
 10
heat shock, 4-day adult
 
 20
Cadmium 50 mM 6 hrs, larvae L3
 
 27
Cadmium 50 mM 12 hrs, larvae L3
 
 52
Cadmium 50 mM 48 hrs, 4-day adult
 
 22
Cadmium 100 mM 48 hrs, 4-day adult
 
 9
Copper 0.5 mM 12 hrs, larvae L3
 
 16
Copper 15 mM 48 hrs, 4-day adult
 
 17
Zinc 5 mM 12 hrs, larvae L3
 
 13
Zinc 4.5 mM 48 hrs, 4-day adult
 
 17
Ethanol 2.5% 3 hrs, larvae L3
 
 9
Ethanol 5% 3 hrs, larvae L3
 
 40
Ethanol 10% 3 hrs, larvae L3
 
 29
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 31
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 11
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 8
Paraquat 5 mM 48 hrs, 4-day adult
 
 13
Paraquat 10 mM 48 hrs, 4-day adult
 
 13
Rotenone 2 μg 12 hrs, larvae L3
 
 36
Rotenone 8 μg 12 hrs, larvae L3
 
 33
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
log, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 12
cold shock, 4-day adult
 
 10
heat shock, 4-day adult
 
 20
Cadmium 50 mM 6 hrs, larvae L3
 27
Cadmium 50 mM 12 hrs, larvae L3
 (52)
Cadmium 50 mM 48 hrs, 4-day adult
 
 22
Cadmium 100 mM 48 hrs, 4-day adult
 
 9
Copper 0.5 mM 12 hrs, larvae L3
 
 16
Copper 15 mM 48 hrs, 4-day adult
 
 17
Zinc 5 mM 12 hrs, larvae L3
 
 13
Zinc 4.5 mM 48 hrs, 4-day adult
 
 17
Ethanol 2.5% 3 hrs, larvae L3
 
 9
Ethanol 5% 3 hrs, larvae L3
 (40)
Ethanol 10% 3 hrs, larvae L3
 29
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 31
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 11
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 8
Paraquat 5 mM 48 hrs, 4-day adult
 
 13
Paraquat 10 mM 48 hrs, 4-day adult
 
 13
Rotenone 2 μg 12 hrs, larvae L3
 (36)
Rotenone 8 μg 12 hrs, larvae L3
 (33)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 12
cold shock, 4-day adult
 
 10
heat shock, 4-day adult
 
 20
Cadmium 50 mM 6 hrs, larvae L3
 
 27
Cadmium 50 mM 12 hrs, larvae L3
 
 52
Cadmium 50 mM 48 hrs, 4-day adult
 
 22
Cadmium 100 mM 48 hrs, 4-day adult
 
 9
Copper 0.5 mM 12 hrs, larvae L3
 
 16
Copper 15 mM 48 hrs, 4-day adult
 
 17
Zinc 5 mM 12 hrs, larvae L3
 
 13
Zinc 4.5 mM 48 hrs, 4-day adult
 
 17
Ethanol 2.5% 3 hrs, larvae L3
 
 9
Ethanol 5% 3 hrs, larvae L3
 
 40
Ethanol 10% 3 hrs, larvae L3
 
 29
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 31
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 11
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 8
Paraquat 5 mM 48 hrs, 4-day adult
 
 13
Paraquat 10 mM 48 hrs, 4-day adult
 
 13
Rotenone 2 μg 12 hrs, larvae L3
 
 36
Rotenone 8 μg 12 hrs, larvae L3
 
 33
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 12
cold shock, 4-day adult
 
 10
heat shock, 4-day adult
 
 20
Cadmium 50 mM 6 hrs, larvae L3
 
 27
Cadmium 50 mM 12 hrs, larvae L3
 
 52
Cadmium 50 mM 48 hrs, 4-day adult
 
 22
Cadmium 100 mM 48 hrs, 4-day adult
 
 9
Copper 0.5 mM 12 hrs, larvae L3
 
 16
Copper 15 mM 48 hrs, 4-day adult
 
 17
Zinc 5 mM 12 hrs, larvae L3
 
 13
Zinc 4.5 mM 48 hrs, 4-day adult
 
 17
Ethanol 2.5% 3 hrs, larvae L3
 
 9
Ethanol 5% 3 hrs, larvae L3
 
 40
Ethanol 10% 3 hrs, larvae L3
 
 29
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 31
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 11
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 8
Paraquat 5 mM 48 hrs, 4-day adult
 
 13
Paraquat 10 mM 48 hrs, 4-day adult
 
 13
Rotenone 2 μg 12 hrs, larvae L3
 
 36
Rotenone 8 μg 12 hrs, larvae L3
 
 33
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Treatment   Expression Level
extended cold, 4-day adult
 
 
cold shock, 4-day adult
 
 
heat shock, 4-day adult
 
 
Cadmium 50 mM 6 hrs, larvae L3
 
 
Cadmium 50 mM 12 hrs, larvae L3
 
 
Cadmium 50 mM 48 hrs, 4-day adult
 
 
Cadmium 100 mM 48 hrs, 4-day adult
 
 
Copper 0.5 mM 12 hrs, larvae L3
 
 
Copper 15 mM 48 hrs, 4-day adult
 
 
Zinc 5 mM 12 hrs, larvae L3
 
 
Zinc 4.5 mM 48 hrs, 4-day adult
 
 
Ethanol 2.5% 3 hrs, larvae L3
 
 
Ethanol 5% 3 hrs, larvae L3
 
 
Ethanol 10% 3 hrs, larvae L3
 
 
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 
Paraquat 5 mM 48 hrs, 4-day adult
 
 
Paraquat 10 mM 48 hrs, 4-day adult
 
 
Rotenone 2 μg 12 hrs, larvae L3
 
 
Rotenone 8 μg 12 hrs, larvae L3
 
 

hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
sensory neuron & labellar taste bristle
hide Classical Alleles ( 11 )
For All Classical Alleles Show

Allele of GαsClassMutagenStocksKnown lesion
GαsSH0782
2 --
GαsB19hypomorphic allele - genetic evidence1 Yes
Gαse046171 --
GαsR60loss of function allele1 Yes
Gαse046160 --
GαsP10 Yes
GαsR190 Yes
GαsR330 --
GαsR650 --
GαsR670 --
GαsR790 --
hide Alleles Carried on Transgenic Constructs ( 16 )
For All Alleles Carried on Transgenic Constructs Show

Allele of GαsClassMutagenStocksKnown lesion
GαsGD85472 Yes
GαsQ215L.Scer\UAS2 Yes
GαsScer\UAS.cCa2 Yes
GαsJF032551 Yes
GαsKK1077421 Yes
Gαs+t100 Yes
GαsdsRNA.cGa0 Yes
GαsdsRNA.Scer\UAS0 Yes
GαsL215Q.ninaE0 Yes
GαsNIG.2835R0 Yes
Gαspept.Scer\UAS0 Yes
GαsScer\UAS.T:Avic\GFP0 Yes
GαsScer\UAS.T:Ivir\HA10 Yes
GαstH30 Yes
GαsVDRC.cUa0 Yes
GαsW24.Scer\UAS0 Yes
hide Aneuploid Aberrations
Disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
insertion of enhancer trap
miscellaneous insertions
hide Gene Ontology: Function, Process & Cellular Component ( 24 unique terms )
hide Terms Based on Experimental Evidence ( 9 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
inferred from genetic interaction with Chi
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from genetic interaction with Bx
inferred from mutant phenotype
Cellular Component
CV term
References
inferred from direct assay
hide Terms Based on Predictions or Assertions ( 15 terms )
Molecular Function
CV term
References
inferred from biological aspect of ancestor with PANTHER:PTN000026392
(assigned by RefGenome)
inferred from biological aspect of ancestor with PANTHER:PTN000026392
(assigned by RefGenome)
inferred from biological aspect of ancestor with PANTHER:PTN000026392
(assigned by RefGenome)
inferred from sequence or structural similarity with UniProtKB:O16118
non-traceable author statement
inferred from electronic annotation with InterPro:IPR000367
inferred from biological aspect of ancestor with PANTHER:PTN000026392
(assigned by RefGenome)
Biological Process
CV term
References
inferred from biological aspect of ancestor with PANTHER:PTN000026754
(assigned by RefGenome)
non-traceable author statement
inferred from sequence or structural similarity with UniProtKB:O16118
non-traceable author statement
non-traceable author statement
non-traceable author statement
Cellular Component
CV term
References
inferred from biological aspect of ancestor with PANTHER:PTN000026392
(assigned by RefGenome)
inferred from biological aspect of ancestor with PANTHER:PTN000026392
(assigned by RefGenome)
inferred from sequence or structural similarity with UniProtKB:O16118
non-traceable author statement
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
protein-protein
Interacting group
Assay
References
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
Gαs allele
Gene
References
unspecified
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
hide OrthoDB Orthologs (47) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
Insect inclusive ortholog search
Arthropod inclusive ortholog search
Metazoa inclusive ortholog search
hideOrthologs in Drosophila Species (EOG6TB4X8)
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly 
 
 
Drosophila simulans
 
Y
 
Drosophila sechellia
 
Y
 
Drosophila erecta
 
Y
 
Drosophila yakuba
 
Y
 
Drosophila ananassae
 
Y
 
Drosophila pseudoobscura pseudoobscura
 
Y
 
Drosophila persimilis
 
Y
 
Drosophila willistoni
 
Y
 
Drosophila virilis
 
Y
 
Drosophila mojavensis
 
Y
 
Drosophila grimshawi
 
Y
 
hideOrthologs in non-Drosophila Dipterans (EOG6CVGGH)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Aedes aegypti
Yellow fever mosquito 
 
Anopheles gambiae
Malaria mosquito 
 
Culex quinquefasciatus
Southern house mosquito 
 
hideOrthologs in non-Dipteran Insects (EOG6T76ZX)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Apis mellifera
Western honey bee 
Amel\LOC411011
 
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG010676
 
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH15895
 
Atta cephalotes
Leafcutter ant 
Acep\ACEP10970
 
Atta cephalotes
Leafcutter ant 
Acep\ACEP10967
 
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO18043
 
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO18042
 
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL15362
 
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL15363
 
Linepithema humile
Argentine ant 
Lhum\LH26148
 
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB24270
 
Solenopsis invicta
Red fire ant 
Sinv\SINV14872
 
Acyrthosiphon pisum
Pea aphid 
 
Bombyx mori
Silkmoth 
 
Bombyx mori
Silkmoth 
 
Pediculus humanus
Human body louse 
 
Tribolium castaneum
Red flour beetle 
 
Tribolium castaneum
Red flour beetle 
 
hideOrthologs in non-Insect Arthropods (EOG6F7M1K)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Daphnia pulex
Water flea 
 
Ixodes scapularis
Deer tick 
 
hideOrthologs in non-Arthropod Metazoa (EOG679T1R)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Caenorhabditis elegans
Nematode 
 
Strongylocentrotus purpuratus
Purple sea urchin 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Xenopus tropicalis
Western clawed frog 
 
Xenopus tropicalis
Western clawed frog 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Mus musculus
House mouse 
 
Rattus norvegicus
Norway rat 
 
Homo sapiens
Human 
 
hide Human Orthologs (1)
Gene
OMIM
HGNC
 
 
hideAAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism
Gene
Drosophila simulans
Drosophila sechellia
Drosophila erecta
Drosophila yakuba
Drosophila ananassae
Drosophila pseudoobscura pseudoobscura
Drosophila persimilis
Drosophila willistoni
Drosophila virilis
Drosophila mojavensis
Drosophila grimshawi
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 13 )
Bloomington
Harvard
Kyoto
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 64 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
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Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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hide Relationship to Other Genes
Source for database identity of
Source for identity of: G-sα60A CG2835
Source for identity of: Gαs G-sα60A
Source for database merge of
Additional comments
FlyBase curator comment: Genes encoding Gα subunits that have been named for their molecular function/orthology have had their symbols and names standardized following the format used in FBrf0220456, which also reflects popular usage in the Drosophila literature.
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G-salpha60A signaling mediates odor identity discrimination in conditioned flies.
One of 42 Drosophila genes identified as being most likely to reveal molecular and cellular mechanisms of nervous system development or plasticity relevant to human Mental Retardation disorders.
G-sα60A is necessary for the death and resorption of wing blade cells after eclosion.
G-sα60A is required for growth and function of neuromuscular synapses.
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
dsRNA made from templates generated with primers against this gene tested in a cl-8 cell reporter assay to examine any role of G-sα60A in the hh signalling pathway.
One of a class of genes with TATA-less promoters that have the conserved DPE sequence.
Olfactory learning depends on regulated Gs signalling in mushroom bodies.
Genetic studies indicate that the G-sα60A pathway mediates its primary effects by a novel pathway in differentiating wing epithelial cells.
Dominant adult phenotypes can be caused by the overexpression of activated Gα proteins.
G proteins belong to a family of membrane-associated guanine nucleotide-binding proteins that couple specific receptors for extracellular signals to specific intracellular effectors, thus regulating the activity of these effectors. When not interacting with the receptor, G proteins are usually in the form of a heterotrimer made up of α, β and γ subunits, with the α subunit bound to GDP. Upon activation by the receptor, the α subunit exchanges GDP for GTP, dissociates from the β-γ subunits and interacts with the effector. Afterwards GTP is hydrolyzed and the heterotrimer of α, β and γ subunits is formed again.
Identification: Isolated from a cDNA library using a bovine Gsα cDNA fragment as a probe.
Encodes a stimulatory G protein α subunit with high homology to mammalian Gsα that is responsible for the coupling of extracellular receptors to adenylate cyclase and an increase in the second messenger cAMP.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
hide Synonyms & Secondary IDs ( 30 )
Reported As
Symbol Synonym
Galpha60A
G-α-60A
 
Gα60A
 
Name Synonym
G-alpha s
G protein sα 60A
G protein α s subunit
 
stimulatory alpha subunit of G protein
Secondary FlyBase IDs
hide References ( 105 )
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hide Recent research papers ( 8 )
Chen and Ganetzky, 2012, J. Cell Biol. 196(4): 529--543
A neuropeptide signaling pathway regulates synaptic growth in Drosophila. [FBrf0217500]
Cheng et al., 2012, Development 139(1): 85--94
Drosophila G-protein-coupled receptor kinase 2 regulates cAMP-dependent Hedgehog signaling. [FBrf0216860]
Choi et al., 2012, Cell Rep. 2(2): 332--344
Autoreceptor Control of Peptide/Neurotransmitter Corelease from PDF Neurons Determines Allocation of Circadian Activity in Drosophila. [FBrf0219328]
Duvall and Taghert, 2012, PLoS Biol. 10(6): e1001337
The Circadian Neuropeptide PDF Signals Preferentially through a Specific Adenylate Cyclase Isoform AC3 in M Pacemakers of Drosophila. [FBrf0218594]
Bredendiek et al., 2011, Chem. Senses 36(1): 69--81
Go α is involved in sugar perception in Drosophila. [FBrf0212580]
Deng et al., 2011, PLoS ONE 6(4): e18605
The Stimulatory Gα(s) Protein Is Involved in Olfactory Signal Transduction in Drosophila. [FBrf0213437]
Guo et al., 2011, Sleep (Rochester) 34(3): 273--281
Go signaling in mushroom bodies regulates sleep in Drosophila. [FBrf0213134]
Moon et al., 2011, Development 138(17): 3835--3845
The THO complex is required for nucleolar integrity in Drosophila spermatocytes. [FBrf0214600]
hide Recent reviews (0)
All reviews listed in FlyBase were published before 2011