A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene Dmel\l(1)3Ah

General Information
SymbolDmel\l(1)3AhSpeciesD. melanogaster
Namelethal (1) 3AhAnnotation symbol
Feature typegeneFlyBase IDFBgn0001406
Gene Model StatusUnannotated Stock availability 1 publicly available
Also Known Aszw2, l(1)zw2, zw-2
Genomic Location
Chromosome (arm)Recombination map1-1.3
Cytogenetic map3A9-3B1Sequence location
hide Summary Information
Automatically generated summary

See sections below for more information
The gene lethal (1) 3Ah is referred to in FlyBase by the symbol Dmel\l(1)3Ah (FBgn0001406). It is a gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 116 alleles are reported. The phenotypes of these alleles are annotated with: female reproductive system; eye. It has no annotated transcripts. Gene has not been localized to the genome sequence.

User Contributed Data
hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
l(1)3Ah
Lethal alleles [l(1)3Ah7, l(1)3Ah9, l(1)3Ah11] die at the egg-larval boundary; l(1)3Ah16 and l(1)3Ah12 die shortly after hatching. Cell viable, but gynandromorphs show reduced survival. l(1)3Ah6 semilethal with biphasic lethal expression in early larval and imago stages; escapers have rough eyes and are male fertile; inviable in combination with deficiency or lethal alleles (Shannon, Kaufman, Shen, and Judd, l972, Genetics 72: 615-38). l(1)3Ah13 viable in epidermal but not female germ-line clones (Garcia-Bellido and Robbins, 1983, Genetics 103: 235-47).
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Description
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FB2013_03
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hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
3A9-3B1  
Left limit from inclusion within Df(1)w-rJ2 (FBrf0023906) Right limit from recombination mapping relative to sgg (FBrf0023906)  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
1-1.3
 
Left of (cM)
(Judd et al., 1972)
Right of (cM)
(Judd et al., 1972)
Notes
hide Gene Model & Products
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
Additional Transcript Data & Comments
Reported size (kB)
7.2 (northern blot)
(Bourouis et al., 1990)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
hide Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term
Evidence
References
hide Expression Deduced from Reporters
hide High-Throughput Expression Data
Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
hide FlyAtlas Anatomy Microarray
hide modENCODE Anatomy RNA-Seq
hide modENCODE Development RNA-Seq
hide modENCODE Cell Lines RNA-Seq
hide modENCODE Treatments RNA-Seq
hide Expression Clusters
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Linkouts
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
cell lethal | germline clone
lethal | larval stage
lethal | larval stage | recessive
lethal | recessive
partially lethal - majority die | polyphasic
Other Phenotypes
Allele
visible
visible | cell non-autonomous | somatic clone
Phenotype manifest in
Allele
egg | germline clone
eye
eye | cell non-autonomous | male | somatic clone
eye | male
female reproductive system
hide Classical Alleles ( 116 )
For All Classical Alleles Show

Allele of l(1)3AhClassMutagenStocksKnown lesion
l(1)3Ah211 --
l(1)3Ah100 --
l(1)3Ah11
0 --
l(1)3Ah120 --
l(1)3Ah130 --
l(1)3Ah140 --
l(1)3Ah150 --
l(1)3Ah160 --
l(1)3Ah170 --
l(1)3Ah180 --
l(1)3Ah190 --
l(1)3Ah10 --
l(1)3Ah200 --
l(1)3Ah220 --
l(1)3Ah230 --
l(1)3Ah240 --
l(1)3Ah250 --
l(1)3Ah260 --
l(1)3Ah270 --
l(1)3Ah280 --
l(1)3Ah290 --
l(1)3Ah20 --
l(1)3Ah300 --
l(1)3Ah310 --
l(1)3Ah320 --
l(1)3Ah330 --
l(1)3Ah340 --
l(1)3Ah350 --
l(1)3Ah360 --
l(1)3Ah370 --
l(1)3Ah380 --
l(1)3Ah390 --
l(1)3Ah30 --
l(1)3Ah400 --
l(1)3Ah410 --
l(1)3Ah420 --
l(1)3Ah430 --
l(1)3Ah440 --
l(1)3Ah450 --
l(1)3Ah460 --
l(1)3Ah470 --
l(1)3Ah480 --
l(1)3Ah490 --
l(1)3Ah510 --
l(1)3Ah520 --
l(1)3Ah530 --
l(1)3Ah540 --
l(1)3Ah550 --
l(1)3Ah560 --
l(1)3Ah570 --
l(1)3Ah580 --
l(1)3Ah590 --
l(1)3Ah50 --
l(1)3Ah600 --
l(1)3Ah610 --
l(1)3Ah620 --
l(1)3Ah62b11
0 --
l(1)3Ah630 --
l(1)3Ah640 --
l(1)3Ah650 --
l(1)3Ah660 --
l(1)3Ah670 --
l(1)3Ah680 --
l(1)3Ah690 --
l(1)3Ah60 --
l(1)3Ah700 --
l(1)3Ah710 --
l(1)3Ah720 --
l(1)3Ah730 --
l(1)3Ah740 --
l(1)3Ah750 --
l(1)3Ah760 --
l(1)3Ah770 --
l(1)3Ah780 --
l(1)3Ah790 --
l(1)3Ah70 --
l(1)3Ah800 --
l(1)3Ah810 --
l(1)3Ah820 --
l(1)3Ah830 --
l(1)3Ah840 --
l(1)3Ah850 --
l(1)3Ah860 --
l(1)3Ah870 --
l(1)3Ah880 --
l(1)3Ah890 --
l(1)3Ah80 --
l(1)3Ah900 --
l(1)3Ah910 --
l(1)3Ah920 --
l(1)3Ah930 --
l(1)3Ah90 --
l(1)3Ahe710 --
l(1)3Ahe730 --
l(1)3Ahe740 --
l(1)3Ahe810 --
l(1)3AhM110 --
l(1)3AhM200 --
l(1)3AhM210 --
l(1)3AhM310 --
l(1)3AhM320 --
l(1)3AhM520 --
l(1)3AhM50 --
l(1)3AhM650 --
l(1)3AhNKu10 --
l(1)3AhNKu20 --
l(1)3AhNKu30 --
l(1)3AhNKu40 --
l(1)3AhNKu50 --
l(1)3AhNKu60 --
l(1)3AhNKu70 --
l(1)3AhNKx10 --
l(1)3AhNKx20 --
l(1)3AhNKx30 --
l(1)3AhNKx40 --
l(1)3AhT160 --
hide Alleles Carried on Transgenic Constructs ( 0 )
For All Alleles Carried on Transgenic Constructs Show

Allele of l(1)3AhClassMutagenStocksKnown lesion
hide Aneuploid Aberrations
Disrupted in
(Nomura and Kurokawa, 1997)
(Judd et al., 1972, Thierry-Mieg, 1982)
(Judd et al., 1972, Thierry-Mieg, 1982, Perrimon and Smouse, 1989, Lin and Wolfner, 1989, Bourouis et al., 1990)
(Kramers et al., 1983)
(Kramers et al., 1983)
(Judd et al., 1972, Thierry-Mieg, 1982, Perrimon and Smouse, 1989)
(Nomura and Kurokawa, 1997)
(Lim and Snyder, 1974, Kramers et al., 1983, Kramers et al., 1991)
(Lim and Snyder, 1974, Liu and Lim, 1975, Thierry-Mieg, 1982, Paradi et al., 1983, Kramers et al., 1983, Kramers et al., 1991)
(Lim and Snyder, 1974)
(Lim and Snyder, 1974, Kramers et al., 1983, Kramers et al., 1991)
(Judd et al., 1972, Thierry-Mieg, 1982)
(Judd et al., 1972, Thierry-Mieg, 1982)
(Kramers et al., 1983, Kramers et al., 1991)
(Judd et al., 1972)
(Judd et al., 1972, Lim and Snyder, 1974, Liu and Lim, 1975, Thierry-Mieg, 1982, Paradi et al., 1983, Kramers et al., 1983, Kramers et al., 1991, Nomura and Kurokawa, 1997)
(Judd et al., 1972)
(Judd et al., 1972, Thierry-Mieg, 1982)
(Goldberg et al., 1989)
(Goldberg et al., 1989)
(Goldberg et al., 1989)
(Goldberg et al., 1989)
(Goldberg et al., 1989)
(Goldberg et al., 1989)
Duplicated in
(Judd et al., 1972, Kramers et al., 1983, Kramers et al., 1991)
(Judd et al., 1972)
(Lefevre, 1981)
(Judd et al., 1972)
(Lefevre, 1981, Eeken et al., 1985)
(Eeken et al., 1985)
(Lefevre, 1981)
Not disrupted in
(Judd et al., 1972)
(Judd et al., 1972, Thierry-Mieg, 1982)
(Judd et al., 1972, Thierry-Mieg, 1982, Perrimon and Smouse, 1989, Lin and Wolfner, 1989, Bourouis et al., 1990)
(Judd et al., 1972, Thierry-Mieg, 1982)
(Nomura and Kurokawa, 1997)
(Nomura and Kurokawa, 1997)
(Eeken et al., 1985, Lin and Wolfner, 1989, Kramers et al., 1991)
(Kramers et al., 1991)
(Kramers et al., 1991)
(Eeken et al., 1985, Kramers et al., 1991)
(Schalet, 1986)
(Lim and Snyder, 1974)
(Liu and Lim, 1975, Paradi et al., 1983, Kramers et al., 1983, Eeken et al., 1985, Kramers et al., 1991)
(Lim and Snyder, 1974, Liu and Lim, 1975, Paradi et al., 1983, Kramers et al., 1983, Eeken et al., 1985, Kramers et al., 1991)
(Lin and Wolfner, 1989)
(Kramers et al., 1991)
(Judd et al., 1972, Thierry-Mieg, 1982, Lin and Wolfner, 1989)
(Goldberg et al., 1989)
(Goldberg et al., 1989)
(Goldberg et al., 1989)
(Goldberg et al., 1989)
(Goldberg et al., 1989)
(Goldberg et al., 1989)
(Goldberg et al., 1989)
(Goldberg et al., 1989)
(Montgomery et al., 1991)
(Montgomery et al., 1991)
(Montgomery et al., 1991)
(Montgomery et al., 1991)
(Montgomery et al., 1991)
(Montgomery et al., 1991)
Not duplicated in
(Kramers et al., 1991)
(Eeken et al., 1985)
(Judd et al., 1972)
(Judd et al., 1972)
(Schalet, 1986)
(Judd et al., 1972)
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
hide Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
hide Terms Based on Experimental Evidence ( 0 terms )
hide Terms Based on Predictions or Assertions ( 0 terms )
hide Sequence Ontology: Class of Gene
gene
 
hide Interactions & Pathways
hide Summary of Physical Interactions
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
l(1)3Ah allele
Gene
References
hide External Data
Linkouts
hide Orthologs
hide OrthoDB Orthologs (0) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
OrthoDB orthology group searches
(Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288)
Drosophila inclusive ortholog search
No orthologs identified
Dipteran inclusive ortholog search
No orthologs identified
Insect inclusive ortholog search
No orthologs identified
Arthropod inclusive ortholog search
No orthologs identified
Metazoa inclusive ortholog search
No orthologs identified
Orthologs in Drosophila Species (None identified)
No orthologies identified
Orthologs in non-Drosophila Dipterans (None identified)
No non-Drosophilid orthologies identified
Orthologs in non-Dipteran Insects (None identified)
No non-Dipteran orthologies identified
Orthologs in non-Insect Arthropods (None identified)
No non-Insect Arthropod orthologies identified
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
hide Human Orthologs (0)
Gene
OMIM
HGNC
hideAAA Orthologs (0) based on analysis using Dmel annotation version 4.3
No orthologs identified
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 1 )
Bloomington
3904
l(1)3Ah21/FM7a/Dp(1;2;Y)w+
hide Genomic Clones ( 0 )
hide cDNA Clones ( 0 )
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
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Linkouts
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
•
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hide Other Information
hide Discoverer
hide Etymology
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
hide Other Comments
Cell viable, but gynandromorphs show reduced survival.
 
hide External Crossreferences & Linkouts
Sequence Crossreferences
Other Crossreferences
Linkouts
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
•
hide Synonyms & Secondary IDs ( 8 )
Reported As
Symbol Synonym
l(1)3Ah
 
l(1)17-59
 
l(1)VA722
 
l(1)zw2
(Williams et al., 1992, Lin and Wolfner, 1989, Paradi et al., 1983, Garcia-Bellido and Robbins, 1983, Lim and Snyder, 1974, Shannon et al., 1972, )
zw-2
(Kramers et al., 1991, Kramers et al., 1983, Liu and Lim, 1975)
zw2
(Montgomery et al., 1991, Pastink et al., 1990, Bourouis et al., 1990, Goldberg et al., 1989, Perrimon and Smouse, 1989, Schalet, 1986, Lefevre and Watkins, 1986, Eeken et al., 1985, Robbins, 1983, Thierry-Mieg, 1982, Lefevre, 1981, Judd et al., 1972)
ZW-2
(Paradi et al., 1983)
Name Synonym
lethal (1) 3Ah
 
Secondary FlyBase IDs
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