A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\l(2)37Cc

General Information
SymbolDmel\l(2)37CcSpeciesD. melanogaster
Namelethal (2) 37CcAnnotation symbolCG10691
Feature typeprotein_coding_geneFlyBase IDFBgn0002031
Gene Model StatusCurrent Stock availability 14 publicly available
Also Known AsCc
Genomic Location
Chromosome (arm)2LRecombination map2-53.9+
Cytogenetic map37C1-37C1Sequence location2L:19,122,040..19,123,866 [-]

Genomic Maps

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modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene lethal (2) 37Cc is referred to in FlyBase by the symbol Dmel\l(2)37Cc (CG10691, FBgn0002031). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process: cellular response to hypoxia. 40 alleles are reported. The phenotypes of these alleles are annotated with: yolk; cystocyte; trichogen cell; egg; macrochaeta; mesothoracic tergum; wing; egg chamber. It has 3 annotated transcripts and 3 annotated polypeptides. Protein features are: Band 7 protein; Prohibitin. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed at stages throughout embryogenesis, during early larval stages, during late pupal stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, adult Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult brain, larval Malpighian tubules, larval fat body. Comments on Affy2 ProbeSet: ProbeSet 1630771_s_at completely aligns to an exonic region common to each of the 3 FlyBase-annotated transcript isoforms of l(2)37Cc. Gene sequence location is 2L:19122040..19123866.

hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
l(2)37Cc
Many different complementing heteroallelic genotypes exhibit opaque wings, often incompletely expanded, moderate Minute-like bristles, and a lighter tan body color.
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2011_10
FB2012_01
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
37C1-37C1  
Limits computationally determined from genome sequence between P{lacW}Ddck02104 and P{lacW}bratk06028&P{lacW}l(2)k09613k09613  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
37C-37C  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
2-53.9+
 
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\l(2)37Cc for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0290291 FBtr0081166 FBtr0081167 FBtr0081165 FBtr0081164 FBtr0301814 FBtr0081163 FBpp0080708 FBpp0291028 FBpp0080707 FBpp0080706 FBti0106021 FBti0037900 FBti0018106
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0081165
  1311
  276
FBtr0081164
  1324
  276
FBtr0301814
  1267
  257
Additional Transcript Data & Comments
Reported size (kB)
1.6 (northern blot)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0080708  
30.4  
276  
5.44  
FBpp0080707  
30.4  
276  
5.44  
FBpp0291028  
28.3  
257  
5.80  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Prohibitin (IPR000163)
Band 7 protein (IPR001107)
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
l(2)37Cc transcripts are observed on northern blots in RNA from early and late embryos, third instar larvae, and adults. They are most abundant at the late embryo stage.
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view l(2)37Cc-RA l(2)37Cc-RB l(2)37Cc-RC l(2)37Cb-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0002031


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0002031
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed at stages throughout embryogenesis, during early larval stages, during late pupal stages, in adult female stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0002031 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 17564
embryo 02-04hr
 
 5167
embryo 04-06hr
 
 3201
embryo 06-08hr
 
 6289
embryo 08-10hr
 
 8669
embryo 10-12hr
 
 14716
embryo 12-14hr
 
 10461
embryo 14-16hr
 
 17301
embryo 16-18hr
 
 15205
embryo 18-20hr
 
 12580
embryo 20-22hr
 
 12043
embryo 22-24hr
 
 9737
larva L1
 
 22925
larva L2
 
 19842
larva L3 12hr old
 
 15273
larva L3 puffstage 1-2
 
 6077
larva L3 puffstage 3-6
 
 5938
larva L3 puffstage 7-9
 
 6424
white prepupae new
 
 5435
white prepupae 12hr
 
 5202
white prepupae 24hr
 
 6624
pupae 2d postWPP
 
 11578
pupae 3d postWPP
 
 10605
pupae 4d postWPP
 
 7575
adult male 01day
 
 7438
adult male 05day
 
 8579
adult male 30day
 
 9236
adult female 01day
 
 14478
adult female 05day
 
 15439
adult female 30day
 
 15770
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (17564)
embryo 02-04hr
 (5167)
embryo 04-06hr
 (3201)
embryo 06-08hr
 (6289)
embryo 08-10hr
 (8669)
embryo 10-12hr
 (14716)
embryo 12-14hr
 (10461)
embryo 14-16hr
 (17301)
embryo 16-18hr
 (15205)
embryo 18-20hr
 (12580)
embryo 20-22hr
 (12043)
embryo 22-24hr
 (9737)
larva L1
 (22925)
larva L2
 (19842)
larva L3 12hr old
 (15273)
larva L3 puffstage 1-2
 (6077)
larva L3 puffstage 3-6
 (5938)
larva L3 puffstage 7-9
 (6424)
white prepupae new
 (5435)
white prepupae 12hr
 (5202)
white prepupae 24hr
 (6624)
pupae 2d postWPP
 (11578)
pupae 3d postWPP
 (10605)
pupae 4d postWPP
 (7575)
adult male 01day
 (7438)
adult male 05day
 (8579)
adult male 30day
 (9236)
adult female 01day
 (14478)
adult female 05day
 (15439)
adult female 30day
 (15770)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (17564)
embryo 02-04hr
 (5167)
embryo 04-06hr
 (3201)
embryo 06-08hr
 (6289)
embryo 08-10hr
 (8669)
embryo 10-12hr
 (14716)
embryo 12-14hr
 (10461)
embryo 14-16hr
 (17301)
embryo 16-18hr
 (15205)
embryo 18-20hr
 (12580)
embryo 20-22hr
 (12043)
embryo 22-24hr
 (9737)
larva L1
 (22925)
larva L2
 (19842)
larva L3 12hr old
 (15273)
larva L3 puffstage 1-2
 (6077)
larva L3 puffstage 3-6
 (5938)
larva L3 puffstage 7-9
 (6424)
white prepupae new
 (5435)
white prepupae 12hr
 (5202)
white prepupae 24hr
 (6624)
pupae 2d postWPP
 (11578)
pupae 3d postWPP
 (10605)
pupae 4d postWPP
 (7575)
adult male 01day
 (7438)
adult male 05day
 (8579)
adult male 30day
 (9236)
adult female 01day
 (14478)
adult female 05day
 (15439)
adult female 30day
 (15770)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 (17564)
embryo 02-04hr
 
 5167
embryo 04-06hr
 
 3201
embryo 06-08hr
 
 6289
embryo 08-10hr
 
 8669
embryo 10-12hr
 (14716)
embryo 12-14hr
 10461
embryo 14-16hr
 (17301)
embryo 16-18hr
 (15205)
embryo 18-20hr
 (12580)
embryo 20-22hr
 (12043)
embryo 22-24hr
 
 9737
larva L1
 (22925)
larva L2
 (19842)
larva L3 12hr old
 (15273)
larva L3 puffstage 1-2
 
 6077
larva L3 puffstage 3-6
 
 5938
larva L3 puffstage 7-9
 
 6424
white prepupae new
 
 5435
white prepupae 12hr
 
 5202
white prepupae 24hr
 
 6624
pupae 2d postWPP
 (11578)
pupae 3d postWPP
 10605
pupae 4d postWPP
 
 7575
adult male 01day
 
 7438
adult male 05day
 
 8579
adult male 30day
 
 9236
adult female 01day
 (14478)
adult female 05day
 (15439)
adult female 30day
 (15770)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 17564
embryo 02-04hr
 
 5167
embryo 04-06hr
 
 3201
embryo 06-08hr
 
 6289
embryo 08-10hr
 
 8669
embryo 10-12hr
 
 14716
embryo 12-14hr
 
 10461
embryo 14-16hr
 
 17301
embryo 16-18hr
 
 15205
embryo 18-20hr
 
 12580
embryo 20-22hr
 
 12043
embryo 22-24hr
 
 9737
larva L1
 
 22925
larva L2
 
 19842
larva L3 12hr old
 
 15273
larva L3 puffstage 1-2
 
 6077
larva L3 puffstage 3-6
 
 5938
larva L3 puffstage 7-9
 
 6424
white prepupae new
 
 5435
white prepupae 12hr
 
 5202
white prepupae 24hr
 
 6624
pupae 2d postWPP
 
 11578
pupae 3d postWPP
 
 10605
pupae 4d postWPP
 
 7575
adult male 01day
 
 7438
adult male 05day
 
 8579
adult male 30day
 
 9236
adult female 01day
 
 14478
adult female 05day
 
 15439
adult female 30day
 
 15770
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0002031 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 17564
embryo 02-04hr
 
 5167
embryo 04-06hr
 
 3201
embryo 06-08hr
 
 6289
embryo 08-10hr
 
 8669
embryo 10-12hr
 
 14716
embryo 12-14hr
 
 10461
embryo 14-16hr
 
 17301
embryo 16-18hr
 
 15205
embryo 18-20hr
 
 12580
embryo 20-22hr
 
 12043
embryo 22-24hr
 
 9737
larva L1
 
 22925
larva L2
 
 19842
larva L3 12hr old
 
 15273
larva L3 puffstage 1-2
 
 6077
larva L3 puffstage 3-6
 
 5938
larva L3 puffstage 7-9
 
 6424
white prepupae new
 
 5435
white prepupae 12hr
 
 5202
white prepupae 24hr
 
 6624
pupae 2d postWPP
 
 11578
pupae 3d postWPP
 
 10605
pupae 4d postWPP
 
 7575
adult male 01day
 
 7438
adult male 05day
 
 8579
adult male 30day
 
 9236
adult female 01day
 
 14478
adult female 05day
 
 15439
adult female 30day
 
 15770
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (17564)
embryo 02-04hr
 (5167)
embryo 04-06hr
 (3201)
embryo 06-08hr
 (6289)
embryo 08-10hr
 (8669)
embryo 10-12hr
 (14716)
embryo 12-14hr
 (10461)
embryo 14-16hr
 (17301)
embryo 16-18hr
 (15205)
embryo 18-20hr
 (12580)
embryo 20-22hr
 (12043)
embryo 22-24hr
 (9737)
larva L1
 (22925)
larva L2
 (19842)
larva L3 12hr old
 (15273)
larva L3 puffstage 1-2
 (6077)
larva L3 puffstage 3-6
 (5938)
larva L3 puffstage 7-9
 (6424)
white prepupae new
 (5435)
white prepupae 12hr
 (5202)
white prepupae 24hr
 (6624)
pupae 2d postWPP
 (11578)
pupae 3d postWPP
 (10605)
pupae 4d postWPP
 (7575)
adult male 01day
 (7438)
adult male 05day
 (8579)
adult male 30day
 (9236)
adult female 01day
 (14478)
adult female 05day
 (15439)
adult female 30day
 (15770)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (17564)
embryo 02-04hr
 (5167)
embryo 04-06hr
 (3201)
embryo 06-08hr
 (6289)
embryo 08-10hr
 (8669)
embryo 10-12hr
 (14716)
embryo 12-14hr
 (10461)
embryo 14-16hr
 (17301)
embryo 16-18hr
 (15205)
embryo 18-20hr
 (12580)
embryo 20-22hr
 (12043)
embryo 22-24hr
 (9737)
larva L1
 (22925)
larva L2
 (19842)
larva L3 12hr old
 (15273)
larva L3 puffstage 1-2
 (6077)
larva L3 puffstage 3-6
 (5938)
larva L3 puffstage 7-9
 (6424)
white prepupae new
 (5435)
white prepupae 12hr
 (5202)
white prepupae 24hr
 (6624)
pupae 2d postWPP
 (11578)
pupae 3d postWPP
 (10605)
pupae 4d postWPP
 (7575)
adult male 01day
 (7438)
adult male 05day
 (8579)
adult male 30day
 (9236)
adult female 01day
 (14478)
adult female 05day
 (15439)
adult female 30day
 (15770)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 17564
embryo 02-04hr
 
 5167
embryo 04-06hr
 
 3201
embryo 06-08hr
 
 6289
embryo 08-10hr
 
 8669
embryo 10-12hr
 14716
embryo 12-14hr
 10461
embryo 14-16hr
 17301
embryo 16-18hr
 15205
embryo 18-20hr
 12580
embryo 20-22hr
 12043
embryo 22-24hr
 
 9737
larva L1
 (22925)
larva L2
 19842
larva L3 12hr old
 15273
larva L3 puffstage 1-2
 
 6077
larva L3 puffstage 3-6
 
 5938
larva L3 puffstage 7-9
 
 6424
white prepupae new
 
 5435
white prepupae 12hr
 
 5202
white prepupae 24hr
 
 6624
pupae 2d postWPP
 11578
pupae 3d postWPP
 10605
pupae 4d postWPP
 
 7575
adult male 01day
 
 7438
adult male 05day
 
 8579
adult male 30day
 
 9236
adult female 01day
 14478
adult female 05day
 15439
adult female 30day
 15770
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 17564
embryo 02-04hr
 
 5167
embryo 04-06hr
 
 3201
embryo 06-08hr
 
 6289
embryo 08-10hr
 
 8669
embryo 10-12hr
 
 14716
embryo 12-14hr
 
 10461
embryo 14-16hr
 
 17301
embryo 16-18hr
 
 15205
embryo 18-20hr
 
 12580
embryo 20-22hr
 
 12043
embryo 22-24hr
 
 9737
larva L1
 
 22925
larva L2
 
 19842
larva L3 12hr old
 
 15273
larva L3 puffstage 1-2
 
 6077
larva L3 puffstage 3-6
 
 5938
larva L3 puffstage 7-9
 
 6424
white prepupae new
 
 5435
white prepupae 12hr
 
 5202
white prepupae 24hr
 
 6624
pupae 2d postWPP
 
 11578
pupae 3d postWPP
 
 10605
pupae 4d postWPP
 
 7575
adult male 01day
 
 7438
adult male 05day
 
 8579
adult male 30day
 
 9236
adult female 01day
 
 14478
adult female 05day
 
 15439
adult female 30day
 
 15770
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0002031


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0002031
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, adult Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult brain, larval Malpighian tubules, larval fat body.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0002031 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 778.525
Larval Midgut
 
 568
Larval Hindgut
 
 980.8
Larval Malpighian Tubules
 
 444.5
Larval Fat Body
 
 494.8
Larval Salivary Gland
 
 784.1
Larval Trachea
 
 688.55
Larval Carcass
 
 775.225
Adult Head
 
 394.5
Adult Eye
 
 458.875
Adult Brain
 
 411.2
Adult Thoracic-Abdominal Ganglion
 
 555
Adult Crop
 
 669.3
Adult Midgut
 
 712.8
Adult Hindgut
 
 800.9
Adult Malpighian Tubules
 
 1116.8
Adult Fat Body
 
 863.2
Adult Salivary Gland
 
 536.9
Adult Heart
 
 524.05
Adult VirginFemale Spermatheca
 
 1183.1
Adult InseminatedFemale Spermatheca
 
 1331.8
Adult Ovary
 
 1062.2
Adult Testis
 
 670.1
Adult Male Accessory Gland
 
 667.6
Adult Carcass
 
 576.8
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (778.525)
Larval Midgut
 (568)
Larval Hindgut
 (980.8)
Larval Malpighian Tubules
 
 444.5
Larval Fat Body
 
 494.8
Larval Salivary Gland
 (784.1)
Larval Trachea
 (688.55)
Larval Carcass
 (775.225)
Adult Head
 
 394.5
Adult Eye
 
 458.875
Adult Brain
 
 411.2
Adult Thoracic-Abdominal Ganglion
 (555)
Adult Crop
 (669.3)
Adult Midgut
 (712.8)
Adult Hindgut
 (800.9)
Adult Malpighian Tubules
 (1116.8)
Adult Fat Body
 (863.2)
Adult Salivary Gland
 536.9
Adult Heart
 524.05
Adult VirginFemale Spermatheca
 (1183.1)
Adult InseminatedFemale Spermatheca
 (1331.8)
Adult Ovary
 (1062.2)
Adult Testis
 (670.1)
Adult Male Accessory Gland
 (667.6)
Adult Carcass
 (576.8)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 778.525
Larval Midgut
 
 568
Larval Hindgut
 
 980.8
Larval Malpighian Tubules
 
 444.5
Larval Fat Body
 
 494.8
Larval Salivary Gland
 
 784.1
Larval Trachea
 
 688.55
Larval Carcass
 
 775.225
Adult Head
 
 394.5
Adult Eye
 
 458.875
Adult Brain
 
 411.2
Adult Thoracic-Abdominal Ganglion
 
 555
Adult Crop
 
 669.3
Adult Midgut
 
 712.8
Adult Hindgut
 
 800.9
Adult Malpighian Tubules
 (1116.8)
Adult Fat Body
 
 863.2
Adult Salivary Gland
 
 536.9
Adult Heart
 
 524.05
Adult VirginFemale Spermatheca
 (1183.1)
Adult InseminatedFemale Spermatheca
 (1331.8)
Adult Ovary
 1062.2
Adult Testis
 
 670.1
Adult Male Accessory Gland
 
 667.6
Adult Carcass
 
 576.8
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 778.525
Larval Midgut
 
 568
Larval Hindgut
 
 980.8
Larval Malpighian Tubules
 
 444.5
Larval Fat Body
 
 494.8
Larval Salivary Gland
 
 784.1
Larval Trachea
 
 688.55
Larval Carcass
 
 775.225
Adult Head
 
 394.5
Adult Eye
 
 458.875
Adult Brain
 
 411.2
Adult Thoracic-Abdominal Ganglion
 
 555
Adult Crop
 
 669.3
Adult Midgut
 
 712.8
Adult Hindgut
 
 800.9
Adult Malpighian Tubules
 
 1116.8
Adult Fat Body
 
 863.2
Adult Salivary Gland
 
 536.9
Adult Heart
 
 524.05
Adult VirginFemale Spermatheca
 
 1183.1
Adult InseminatedFemale Spermatheca
 
 1331.8
Adult Ovary
 
 1062.2
Adult Testis
 
 670.1
Adult Male Accessory Gland
 
 667.6
Adult Carcass
 
 576.8
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0002031 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 778.525
Larval Midgut
 
 568
Larval Hindgut
 
 980.8
Larval Malpighian Tubules
 
 444.5
Larval Fat Body
 
 494.8
Larval Salivary Gland
 
 784.1
Larval Trachea
 
 688.55
Larval Carcass
 
 775.225
Adult Head
 
 394.5
Adult Eye
 
 458.875
Adult Brain
 
 411.2
Adult Thoracic-Abdominal Ganglion
 
 555
Adult Crop
 
 669.3
Adult Midgut
 
 712.8
Adult Hindgut
 
 800.9
Adult Malpighian Tubules
 
 1116.8
Adult Fat Body
 
 863.2
Adult Salivary Gland
 
 536.9
Adult Heart
 
 524.05
Adult VirginFemale Spermatheca
 
 1183.1
Adult InseminatedFemale Spermatheca
 
 1331.8
Adult Ovary
 
 1062.2
Adult Testis
 
 670.1
Adult Male Accessory Gland
 
 667.6
Adult Carcass
 
 576.8
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 778.525
Larval Midgut
 568
Larval Hindgut
 (980.8)
Larval Malpighian Tubules
 
 444.5
Larval Fat Body
 
 494.8
Larval Salivary Gland
 784.1
Larval Trachea
 688.55
Larval Carcass
 775.225
Adult Head
 
 394.5
Adult Eye
 
 458.875
Adult Brain
 
 411.2
Adult Thoracic-Abdominal Ganglion
 555
Adult Crop
 669.3
Adult Midgut
 712.8
Adult Hindgut
 800.9
Adult Malpighian Tubules
 (1116.8)
Adult Fat Body
 (863.2)
Adult Salivary Gland
 536.9
Adult Heart
 524.05
Adult VirginFemale Spermatheca
 (1183.1)
Adult InseminatedFemale Spermatheca
 (1331.8)
Adult Ovary
 (1062.2)
Adult Testis
 670.1
Adult Male Accessory Gland
 667.6
Adult Carcass
 576.8
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 778.525
Larval Midgut
 
 568
Larval Hindgut
 
 980.8
Larval Malpighian Tubules
 
 444.5
Larval Fat Body
 
 494.8
Larval Salivary Gland
 
 784.1
Larval Trachea
 
 688.55
Larval Carcass
 
 775.225
Adult Head
 
 394.5
Adult Eye
 
 458.875
Adult Brain
 
 411.2
Adult Thoracic-Abdominal Ganglion
 
 555
Adult Crop
 
 669.3
Adult Midgut
 
 712.8
Adult Hindgut
 
 800.9
Adult Malpighian Tubules
 1116.8
Adult Fat Body
 
 863.2
Adult Salivary Gland
 
 536.9
Adult Heart
 
 524.05
Adult VirginFemale Spermatheca
 1183.1
Adult InseminatedFemale Spermatheca
 1331.8
Adult Ovary
 1062.2
Adult Testis
 
 670.1
Adult Male Accessory Gland
 
 667.6
Adult Carcass
 
 576.8
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 778.525
Larval Midgut
 
 568
Larval Hindgut
 
 980.8
Larval Malpighian Tubules
 
 444.5
Larval Fat Body
 
 494.8
Larval Salivary Gland
 
 784.1
Larval Trachea
 
 688.55
Larval Carcass
 
 775.225
Adult Head
 
 394.5
Adult Eye
 
 458.875
Adult Brain
 
 411.2
Adult Thoracic-Abdominal Ganglion
 
 555
Adult Crop
 
 669.3
Adult Midgut
 
 712.8
Adult Hindgut
 
 800.9
Adult Malpighian Tubules
 
 1116.8
Adult Fat Body
 
 863.2
Adult Salivary Gland
 
 536.9
Adult Heart
 
 524.05
Adult VirginFemale Spermatheca
 
 1183.1
Adult InseminatedFemale Spermatheca
 
 1331.8
Adult Ovary
 
 1062.2
Adult Testis
 
 670.1
Adult Male Accessory Gland
 
 667.6
Adult Carcass
 
 576.8
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 394.5
 
NA 
Eye
 
 458.875
 
NA 
Brain
 
 411.2
 
778.525 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 555
 
NA 
Crop
 
 669.3
 
568 
Midgut
 
 712.8
 
980.8 
Hindgut
 
 800.9
 
444.5 
Malpighian Tubules
 
 1116.8
 
494.8 
Fat Body
 
 863.2
 
784.1 
Salivary Gland
 
 536.9
 
NA 
Heart
 
 524.05
 
688.55 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 1183.1
 
NA 
InseminatedFemale Spermatheca
 
 1331.8
 
NA 
Ovary
 
 1062.2
 
NA 
Testis
 
 670.1
 
NA 
Male Accessory Gland
 
 667.6
 
775.225 
Carcass
 
 576.8

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
melanotic mass & adult abdomen
hide Classical Alleles ( 29 )
For All Classical Alleles Show

Allele of l(2)37CcClassMutagenStocksKnown lesion
l(2)37Cc202 Yes
l(2)37Cc23
2 --
l(2)37Cc42 --
l(2)37Ccts12 --
l(2)37CcC283
1 --
l(2)37Ccfs11 --
l(2)37Cc100 --
l(2)37Cc110 --
l(2)37Cc120 --
l(2)37Cc130 --
l(2)37Cc140 --
l(2)37Cc15hypomorphic allele - genetic evidence0 --
l(2)37Cc160 --
l(2)37Cc170 --
l(2)37Cc180 --
l(2)37Cc190 --
l(2)37Cc10 --
l(2)37Cc21
0 --
l(2)37Cc22
0 --
l(2)37Cc20 --
l(2)37Cc30 --
l(2)37Cc50 --
l(2)37Cc60 --
l(2)37Cc70 --
l(2)37Cc80 --
l(2)37Cc90 --
l(2)37Ccts20 --
l(2)37Ccts3
0 --
l(2)37CcVA18
0 Yes
hide Alleles Carried on Transgenic Constructs ( 11 )
For All Alleles Carried on Transgenic Constructs Show

Allele of l(2)37CcClassMutagenStocksKnown lesion
l(2)37CcGD53282 Yes
l(2)37CcHMS003991 Yes
l(2)37CcHMS007021 Yes
l(2)37Cc+t5.30 Yes
l(2)37Cc+t6.60 Yes
l(2)37CcC20 Yes
l(2)37CcC40 Yes
l(2)37CcC50 Yes
l(2)37CcC60 Yes
l(2)37CcScer\UAS.T:Avic\GFP-EGFP0 Yes
l(2)37CcUbi-p63E.T:Avic\GFP-EGFP0 Yes
hide Aneuploid Aberrations
Disrupted in
Not disrupted in
Duplicated in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
characterization construct
Insertions
Type of insertions
Name
Expression data
miscellaneous insertions
hide Gene Ontology: Function, Process & Cellular Component ( 8 unique terms )
hide Terms Based on Experimental Evidence ( 5 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
inferred from mutant phenotype
Cellular Component
CV term
References
inferred from direct assay
inferred from direct assay
hide Terms Based on Predictions or Assertions ( 4 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
Cellular Component
CV term
References
inferred from electronic annotation with InterPro:IPR000163
non-traceable author statement
inferred from sequence or structural similarity with Saccharomyces PHB1
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
l(2)37Cc allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
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hide Stocks Listed in FlyBase ( 14 )
Bloomington
Kyoto
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 95 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Source for merge of: l(2)37Cc CG10691
Additional comments
hide Other Comments
Located between coordinates +5.8 and +7.4.
Biochemical characterization of the l(2)37Cc gene product suggest the protein is associated with a mitochondrial membrane.
l(2)37Cc has a role in cuticle formation.
Dot matrix analysis demonstrates there is very little sequence homology between Ddc or amd, and l(2)37Cc or CG10561 transcripts, nor is there any relationship between l(2)37Cc or CG10561 transcripts.
Complementation analysis of the 7.6kb PstI fragment demonstrates this fragment carries the Ddc gene alone.
Many different complementing heteroallelic genotypes exhibit opaque wings, often incompletely expanded, moderate Minute-like bristles and a lighter tan body color.
 
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Prohibitin (IPR000163)
Band 7 protein (IPR001107)
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 7 )
Reported As
Symbol Synonym
fs(2)HH32
 
Name Synonym
lethal (2) 37Cc
transcription unit No. 4
Secondary FlyBase IDs
  • FBgn0032758
hide References ( 46 )
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hide Recent research papers ( 1 )
Blanco et al., 2010, BMC Dev. Biol. 10: 94
Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812]
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All reviews listed in FlyBase were published before 2010