FB2021_01, released Feb 18, 2021

Gene: Dmel\AspRS

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General Information
Symbol
Dmel\AspRS
Species
D. melanogaster
Name
Aspartyl-tRNA synthetase
Annotation Symbol
CG3821
Feature Type
protein_coding_gene
FlyBase ID
FBgn0002069
Gene Model Status
Current
Stock Availability
9 publicly available
Gene Snapshot
Aspartyl-tRNA synthetase (AspRS) is an essential gene that is predicted to encode an aspartate-tRNA ligase. It functions as a Sxl dosage-sensitive maternal modifier. [Date last reviewed: 2019-08-01]
Other Summaries
Also Known As

Aats-asp, poney, l(2)49Db, l(2)vr1, l(2)k04508

Key Links
Genomic Location
Cytogenetic map
49D6-49D7
Sequence location
2R:12,877,004..12,883,168 [+]
Recombination map

2-67

RefSeq locus
NT_033778 REGION:12877004..12883168
Sequence
Get Decorated FASTA
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
NCBI
UCSC
Ensembl
PopFly
Function
GO Summary Ribbons
Gene Ontology (GO) Annotations (7 terms)
Molecular Function (3 terms)
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (3 terms)
CV Term
Evidence
References
enables aspartate-tRNA ligase activity
inferred from biological aspect of ancestor with PANTHER:PTN000502509
(assigned by GO_Central )
(Gaudet et al., 2011)
traceable author statement
(Lu et al., 2015)
enables ATP binding
(assigned by InterPro )
(FlyBase Curators et al., 2004-)
enables RNA binding
inferred from biological aspect of ancestor with PANTHER:PTN000502509
(assigned by GO_Central )
(Gaudet et al., 2011)
Biological Process (1 term)
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (1 term)
CV Term
Evidence
References
involved_in aspartyl-tRNA aminoacylation
traceable author statement
(Lu et al., 2015)
inferred from biological aspect of ancestor with PANTHER:PTN000502509
(assigned by GO_Central )
(Gaudet et al., 2011)
Cellular Component (3 terms)
Terms Based on Experimental Evidence (1 term)
CV Term
Evidence
References
part_of aminoacyl-tRNA synthetase multienzyme complex
inferred from direct assay
(Kerjan et al., 1994)
Terms Based on Predictions or Assertions (3 terms)
CV Term
Evidence
References
part_of aminoacyl-tRNA synthetase multienzyme complex
inferred from biological aspect of ancestor with PANTHER:PTN000502509
(assigned by GO_Central )
(Gaudet et al., 2011)
located_in cytoplasm
traceable author statement
(Lu et al., 2015)
located_in cytosol
inferred from biological aspect of ancestor with PANTHER:PTN000502509
(assigned by GO_Central )
(Gaudet et al., 2011)
Gene Group (FlyBase)
Protein Family (UniProt)
-
Protein Signatures (InterPro)
Summaries
Gene Group (FlyBase)
CYTOPLASMIC AMINOACYL-TRNA SYNTHETASES -
Cytoplasmic aminoacyl-tRNA synthetases catalyze the ligation of amino acids to their cognate tRNAs in the cytoplasm. (Adapted from FBrf0230668.)
Gene Model and Products
Number of Transcripts
3
Number of Unique Polypeptides
1

Please see the JBrowse view of Dmel\AspRS for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Comments on Gene Model

Gene model reviewed during 5.55

Gene model reviewed during 5.40

Gene model reviewed during 5.46

Low-frequency RNA-Seq exon junction(s) not annotated.

Gene model reviewed during 5.49

Gene model reviewed during 5.57

Sequence Ontology: Class of Gene
nuclear_gene
protein_coding_gene
Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
AspRS-RA
FBtr0087784
NM_057261
1976
531
AspRS-RB
FBtr0332882
NM_001274002
2246
531
AspRS-RC
FBtr0339391
NM_001274001
1899
531
Additional Transcript Data and Comments
Reported size (kB)

1.9 (longest cDNA)

(Stitzinger et al., 1999)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank
AspRS-PA
FBpp0086897
59.1
531
6.80
NP_476609
AAF58445
AspRS-PB
FBpp0305104
59.1
531
6.80
NP_001260931
AGB93464
AspRS-PC
FBpp0308483
59.1
531
6.80
NP_001260930
AGB93463
Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

531 aa isoforms: AspRS-PA, AspRS-PB, AspRS-PC
Additional Polypeptide Data and Comments
Reported size (kDa)

531 (aa)

(Stitzinger et al., 1999)
Comments
External Data
Crossreferences
InterPro - A database of protein families, domains and functional sites
Linkouts
Sequences Consistent with the Gene Model
Nucleotide / Polypeptide Records
 
UniProt
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\AspRS using the Feature Mapper tool.

External Data
Crossreferences
Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
Linkouts
Expression Data
Expression Summary Ribbons
Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.
For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.
Transcript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
embryonic stage
organism | ubiquitous
(Seshaiah and Andrew, 1999)
embryonic/larval salivary gland
(Seshaiah and Andrew, 1999)
embryonic stage 7 -- 8
organism | ubiquitous
(Fisher et al., 2012)
embryonic stage 9 -- 10
organism | ubiquitous
(Fisher et al., 2012)
embryonic stage 11 -- 12
organism | ubiquitous
(Fisher et al., 2012)
embryonic stage 13 -- 16
organism | ubiquitous
(Fisher et al., 2012)
embryonic stage 1 -- 3
organism

Comment: maternally deposited

(Fisher et al., 2012)
embryonic stage 4 -- 6
organism | ubiquitous
(Fisher et al., 2012)
Additional Descriptive Data

Aats-asp transcripts are at a transiently elevated level in the embryonic salivary gland that persists from ~embryonic stage 11-12.

(Seshaiah and Andrew, 1999)
Marker for
 
Subcellular Localization
CV Term
Polypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
day 7 of adulthood -- day 49 of adulthood
adult heart
(Cammarato et al., 2011)
adult stage
adult head
(Aradska et al., 2015)
Additional Descriptive Data
Marker for
 
Subcellular Localization
CV Term
Evidence
References
part_of aminoacyl-tRNA synthetase multienzyme complex
inferred from direct assay
(Kerjan et al., 1994)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\AspRS in GBrowse 2
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Bulk Downloads
RNA-Seq RPKM values for all genes
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
Flygut - An atlas of the Drosophila adult midgut
Images
FlyBase Wiki
Image Based Resources
Alleles, Insertions, Transgenic Constructs, and Aberrations
Classical and Insertion Alleles ( 16 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 6 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of AspRS
Transgenic constructs containing regulatory region of AspRS
Aberrations (Deficiencies and Duplications) ( 27 )
Phenotypes
For more details about a specific phenotype click on the relevant allele symbol.
Lethality
Allele
lethal
lethal, with Scer\GAL4Act5C.PU
lethal, with Scer\GAL4GMR.PF, Scer\GAL4ey.PH
lethal, with Scer\GAL4pnr-MD237
lethal | recessive
lethal - all die before end of larval stage | recessive
lethal - all die before end of pupal stage, with Scer\GAL4pnr-MD237
lethal - all die during P-stage, with Scer\GAL4Mef2.PR
viable, with Dcr-2UAS.cDa, Scer\GAL4elav.PLu
viable, with Scer\GAL4tin.CΔ4
Other Phenotypes
Allele
abnormal mitotic cell cycle | cell autonomous | recessive
abnormal mitotic cell cycle | recessive
abnormal neuroanatomy | larval stage
decreased body size | larval stage
decreased cell number | cell autonomous | larval stage | somatic clone
decreased cell size | cell autonomous | somatic clone
decreased occurrence of cell division | larval stage
non-suppressor of variegation | dominant, with In(1)wm4
non-suppressor of variegation | dominant, with P{hsp26-pt-T}39C-5
some die during larval stage | recessive
some die during pupal stage, with Scer\GAL4pnr-MD237
wild-type
Phenotype manifest in
Allele
embryonic/larval fat body | third instar larval stage, with Scer\GAL4SPARC-MI00329-GAL4
extracellular matrix | third instar larval stage, with Scer\GAL4SPARC-MI00329-GAL4
ganglion mother cell | larval stage
larval neuroblast | larval stage
wing, with Scer\GAL4Bx-MS1096
wing disc | cell autonomous | somatic clone
Orthologs
Downloads
Download All DIOPT Orthologs
Download All OrthoDB Orthologs
Human Orthologs (via DIOPT v8.0)
Homo sapiens (Human) (3)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Source
Compara
eggNOG
Hieranoid
Homologene
Inparanoid
Isobase
OMA
OrthoDB
OrthoFinder
OrthoInspector
orthoMCL
Panther
Phylome
RoundUp
TreeFam
ZFIN
Alignment
Complementation?
Transgene?
Hsap\DARS
15 of 15
Yes
Yes
Hsap\NARS2
1 of 15
No
No
Hsap\NARS
1 of 15
No
No
Model Organism Orthologs (via DIOPT v8.0)
Mus musculus (laboratory mouse) (3)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Source
Compara
eggNOG
Hieranoid
Homologene
Inparanoid
Isobase
OMA
OrthoDB
OrthoFinder
OrthoInspector
orthoMCL
Panther
Phylome
RoundUp
TreeFam
ZFIN
Alignment
Complementation?
Transgene?
Mmus\Dars
14 of 15
Yes
Yes
Mmus\Nars2
1 of 15
No
No
Mmus\Nars
1 of 15
No
No
Rattus norvegicus (Norway rat) (3)
Rnor\Dars
13 of 13
Yes
Yes
Rnor\Nars2
1 of 13
No
No
Rnor\Nars
1 of 13
No
No
Xenopus tropicalis (Western clawed frog) (3)
Xtro\dars
9 of 12
Yes
Yes
Xtro\nars2
1 of 12
No
No
Xtro\nars
1 of 12
No
No
Danio rerio (Zebrafish) (4)
Drer\dars
10 of 15
Yes
Yes
Drer\nars2
1 of 15
No
No
Drer\nars
1 of 15
No
No
Drer\si:ch211-256m1.8
1 of 15
No
No
Caenorhabditis elegans (Nematode, roundworm) (2)
Cele\dars-1
13 of 15
Yes
Yes
Cele\nars-1
1 of 15
No
No
Arabidopsis thaliana (thale-cress) (2)
Atha\AT4G26870
9 of 9
Yes
Yes
Atha\AT4G31180
9 of 9
Yes
Yes
Saccharomyces cerevisiae (Brewer's yeast) (3)
Scer\DPS1
14 of 15
Yes
Yes
Scer\DED81
1 of 15
No
No
Scer\SLM5
1 of 15
No
No
Schizosaccharomyces pombe (Fission yeast) (1)
Spom\drs1
11 of 12
Yes
Yes
Ortholog(s) in Drosophila Species (via OrthoDB v9.1) ( EOG091906IG )
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila suzukii
Spotted wing Drosophila
Dsuz\DS10_00005778
Drosophila simulans
Dsim\GD10925
Drosophila sechellia
Dsec\GM21429
Drosophila erecta
Dere\GG20342
Drosophila yakuba
Dyak\Aats-asp
Drosophila ananassae
Dana\GF12925
Drosophila pseudoobscura pseudoobscura
Dpse\GA17710
Drosophila persimilis
Dper\GL17018
Drosophila willistoni
Dwil\GK20765
Drosophila virilis
Dvir\GJ20350
Drosophila mojavensis
Dmoj\GI18555
Drosophila grimshawi
Dgri\GH21379
Orthologs in non-Drosophila Dipterans (via OrthoDB v9.1) ( EOG091503MK )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Musca domestica
House fly
Mdoa\17012278
Glossina morsitans
Tsetse fly
Gmor\GMOY008696
Lucilia cuprina
Australian sheep blowfly
Lcup\FF38_13176
Aedes aegypti
Yellow fever mosquito
Aaeg\AAEL002748
Aedes aegypti
Yellow fever mosquito
Aaeg\AAEL011518
Anopheles darlingi
American malaria mosquito
Adar\ADAC009182
Anopheles gambiae
Malaria mosquito
Agam\AGAP005576
Culex quinquefasciatus
Southern house mosquito
Cqui\CPIJ015212
Culex quinquefasciatus
Southern house mosquito
Cqui\CPIJ019538
Orthologs in non-Dipteran Insects (via OrthoDB v9.1) ( EOG090W051H )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Bombyx mori
Silkmoth
Bmor\BGIBMGA009794
Bombyx mori
Silkmoth
Bmor\BGIBMGA009795
Danaus plexippus
Monarch butterfly
Dple\DPOGS212525-PA
Heliconius melpomene
Postman butterfly
Hmel\HMEL009339
Apis florea
Little honeybee
Aflo\2147565843
Apis mellifera
Western honey bee
Amel\Aats-asp
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP14100
Bombus terrestris
Buff-tailed bumblebee
Bter\15206201
Linepithema humile
Argentine ant
Lhum\LH10017
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:0011a2
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG015039
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_07893
Tribolium castaneum
Red flour beetle
Tcas\TC002857
Pediculus humanus
Human body louse
Phum\PHUM090410
Rhodnius prolixus
Kissing bug
Rpro\RPRC014948
Cimex lectularius
Bed bug
Clec\CLEC005404
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI007430
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI072994
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_13480
Orthologs in non-Insect Arthropods (via OrthoDB v9.1) ( EOG090X04XR )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Strigamia maritima
European centipede
Smar\SMAR012762
Ixodes scapularis
Black-legged tick
Isca\ISCW008099
Stegodyphus mimosarum
African social velvet spider
Smim\KFM63678.1
Tetranychus urticae
Two-spotted spider mite
Turt\tetur05g08020
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_99304
Orthologs in non-Arthropod Metazoa (via OrthoDB v9.1) ( EOG091G0530 )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Dars
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Asps_1
Ciona intestinalis
Vase tunicate
Cint\LOC100186203
Gallus gallus
Domestic chicken
Ggal\DARS
Paralogs
Downloads
Download All DIOPT Paralogs
Paralogs (via DIOPT v8.0)
Drosophila melanogaster (Fruit fly) (4)
Gene Symbol
Score
Source
Compara
eggNOG
Homologene
Inparanoid
Isobase
OrthoDB
OrthoFinder
orthoMCL
Panther
RoundUp
Alignment
AsnRS
2 of 10
AsnRS-m
2 of 10
AspRS-m
1 of 10
LysRS
1 of 10
Human Disease Associations
FlyBase Human Disease Model Reports
    Disease Model Summary Ribbon
    Disease Ontology (DO) Annotations
    Models Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Evidence
    References
    Potential Models Based on Orthology ( 0 )
    Human Ortholog
    Disease
    Evidence
    References
    Modifiers Based on Experimental Evidence ( 1 )
    Allele
    Disease
    Interaction
    References
    AspRSGD1339
    ameliorates  cancer
    modeled by ykiS168A.UAS.EGFP,Tag:HA
    (Yeom et al., 2020)
    Disease Associations of Human Orthologs (via DIOPT v8.0 and OMIM)
    Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
    Homo sapiens (Human)
    Gene name
    Score
    OMIM
    OMIM Phenotype
    DO term
    Complementation?
    Transgene?
    DARS1; aspartyl-tRNA synthetase 1
    15 of 15
    603084
      Functional Complementation Data
      Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
      Interactions
      Summary of Physical Interactions
      Summary of Genetic Interactions
      esyN Network Diagram
      esyN Network Key:
      Suppression
      Enhancement
      View in Interactions Browser
      Please look at the allele data for full details of the genetic interactions
      Starting gene(s)
      Interaction type
      Interacting gene(s)
      Reference
      AspRS
      suppressible
      Dp
      (Galloni and Edgar, 1999)
      AspRS
      suppressible
      E2f1
      (Galloni and Edgar, 1999)
      Starting gene(s)
      Interaction type
      Interacting gene(s)
      Reference
      Sxl|snf
      enhanceable
      AspRS
      (Stitzinger et al., 1999)
      yki
      suppressible
      AspRS
      (Yeom et al., 2020)
      External Data
      Linkouts
      BioGRID - A database of protein and genetic interactions.
      DroID - A comprehensive database of gene and protein interactions.
      InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.
      MIST (protein-protein) - An integrated Molecular Interaction Database
      Pathways
      Signaling Pathways (FlyBase)
      Metabolic Pathways
      FlyCyc Pathways - Pathways from a BioCyc PGDB for Dmel
      KEGG Pathways - Wiring diagrams of molecular interactions, reactions and relations.
      External Data
      Linkouts
      Genomic Location and Detailed Mapping Data
      Chromosome (arm)
      2R
      Recombination map

      2-67

      Cytogenetic map
      49D6-49D7
      Sequence location
      2R:12,877,004..12,883,168 [+]
      FlyBase Computed Cytological Location
      Cytogenetic map
      Evidence for location
      49D6-49D7
      Limits computationally determined from genome sequence between P{lacW}bick10712 and P{PZ}l(2)0142401424
      Experimentally Determined Cytological Location
      Cytogenetic map
      Notes
      References
      49E1-49E2
      (determined by in situ hybridisation)
      (Spradling et al., 1999, BDGP Project Members, 1994-1999)
      Experimentally Determined Recombination Data
      Location

      2-67

      (FlyBase, 2016)

      2-70.7

      (Comeron et al., 2012)
      Left of (cM)
      Right of (cM)
      Notes
      Stocks and Reagents
      Stocks (9)
      Genomic Clones (24)
      cDNA Clones (165)
       

      Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

      cDNA clones, fully sequenced
      BDGP DGC clones
      Other clones
        Drosophila Genomics Resource Center cDNA clones

        For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

        cDNA Clones, End Sequenced (ESTs)
        BDGP DGC clones
        Other clones
        RNAi and Array Information
        Linkouts
        DRSC - Results frm RNAi screens
        GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents
        Antibody Information
        Laboratory Generated Antibodies
         
        Commercially Available Antibodies
         
        Other Information
        Relationship to Other Genes
        Source for database identify of

        Source for identity of: AspRS Aats-asp

        (Lu et al., 2015)
        Source for database merge of

        Source for merge of: Aats-asp l(2)k04508

        (Galloni and Edgar, 1999)

        Source for merge of: Aats-asp anon- EST:Liang-2.49

        (Ashburner, 2004.6.30)
        Additional comments
        Other Comments

        Area matching Drosophila gene for Aspartate ligase, Acc. No. AF113612.

        (Davies, 2001.3.15)

        Identification: One of a collection of genes identified with defective larval growth that extend larval life.

        (Galloni and Edgar, 1999)

        Aats-asp is involved in sex determination and a mutant has been isolated that rescues the male lethality of snf1 SxlM1 individuals.

        (Albrecht and Salz, 1994)
        Origin and Etymology
        Discoverer
        Etymology
        Identification
        External Crossreferences and Linkouts ( 53 )
        Sequence Crossreferences
        NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
        GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
        GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information
        Other crossreferences
        BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
        Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones
        Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
        Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
        Flygut - An atlas of the Drosophila adult midgut
        GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents
        iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)
        InterPro - A database of protein families, domains and functional sites
        KEGG Genes - Molecular building blocks of life in the genomic space.
        modMine - A data warehouse for the modENCODE project
        Linkouts
        ApoDroso - Functional genomic database for photoreceptor development, survival and function
        BioGRID - A database of protein and genetic interactions.
        DroID - A comprehensive database of gene and protein interactions.
        DRSC - Results frm RNAi screens
        FLIGHT - Cell culture data for RNAi and other high-throughput technologies
        FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
        FlyCyc Genes - Genes from a BioCyc PGDB for Dmel
        FlyCyc Pathways - Pathways from a BioCyc PGDB for Dmel
        FlyMine - An integrated database for Drosophila genomics
        InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.
        KEGG Pathways - Wiring diagrams of molecular interactions, reactions and relations.
        MIST (protein-protein) - An integrated Molecular Interaction Database
        Synonyms and Secondary IDs (19)
        Datasets (0)
        Study focus (0)
        Experimental Role
        Project
        Project Type
        Title
        References (80)