A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\hyd

General Information
SymbolDmel\hydSpeciesD. melanogaster
Namehyperplastic discsAnnotation symbolCG9484
Feature typeprotein_coding_geneFlyBase IDFBgn0002431
Gene Model StatusCurrent Stock availability 6 publicly available
Also Known Asl(3)c43, c43
Genomic Location
Chromosome (arm)3RRecombination map3-49.0
Cytogenetic map85E5-85E5Sequence location3R:5,540,345..5,551,333 [-]

Genomic Maps

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modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene hyperplastic discs is referred to in FlyBase by the symbol Dmel\hyd (CG9484, FBgn0002431). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: ubiquitin-protein ligase activity. There is experimental evidence that it is involved in the biological process: male meiosis cytokinesis; spermatid nucleus differentiation; female gonad development; imaginal disc development; eye-antennal disc morphogenesis; imaginal disc growth; spermatogenesis. 43 alleles are reported. The phenotypes of these alleles are annotated with: organ system; multicellular structure; organelle; dorsal thoracic disc; imaginal precursor; thoracic segment; anatomical structure; larval thorax; organ system subdivision; spermatocyte; elongation stage spermatid; cytoplasmic part; nucleus. It has one annotated transcript and one annotated polypeptide. Protein features are: E3 ubiquitin ligase EDD, ubiquitin-associated domain; HECT; Polyadenylate-binding protein/Hyperplastic disc protein; Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote; Zinc finger, N-recognin; Zinc finger, N-recognin, metazoa. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval central nervous system, adult crop, adult Malpighian tubules, larval/adult salivary gland, larval trachea, adult ovary, adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, larval/adult midgut, larval/adult hindgut, larval Malpighian tubules, adult heart, larval/adult fat body, adult spermathecae, adult male accessory gland, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1641297_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of hyd. Gene sequence location is 3R:5540345..5551333.

External Summaries
hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
l(3)85Ea
l(3)85Ea1 is a heat-sensitive allele. At 20 about half the expected number of homozygotes eclose, the remainder dying as pharate adults; those that emerge are sterile, ovaries failing to mature, testes appearing morphologically normal; they also exhibit other slight abnormalities such as extra sex-comb teeth and defective wing margins. At 22 all flies die as pharate adults with greatly reduced heads, often with duplicated antennal and palpal structures. No metamorphosis accompanies development at 25; the eye disc is virtually missing, whereas the wing and haltere discs are severely hyperplastic; disc effects autonomous in transplants. Temperature-shift experiments demonstrate a temperature-sensitive period lasting from the beginning of the second instar until the end of pupation. The 24-hr pulses of 27 during development reveal that the various phenotypic consequences of homozygosity for this allele have different TSP's. l(3)85Ea1 wing discs used to demonstrate that extra cellular proliferation is insufficient to induce transdetermination (Shearn, Martin, Davis, and Hersperger, 1984, Dev. Biol. 106: 135-46). Density of gap junctions in hyperplastic imaginal wing discs markedly reduced (Ryerse and Nagel, 1984, Dev. Biol. 105: 396-403); in shift-up experiments, reduction in gap junctions precedes the onset of tissue hyperplasia (Ryerse and Nagel, 1985, Wilhelm Roux's Arch. Dev. Biol. 194: 480-86). Cell death also observed in wing discs as early as twelve hours following application of restrictive temperature (Sedlak, 1986, Dev. Genet 6: 199-212). Mitosis normal (Gatti and Baker, 1989, Genes Dev. 3: 438-53).
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2011_10
Controlled Vocabulary Terms
References
FB2012_01
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
85E5-85E5  
Limits computationally determined from genome sequence between P{EP}CrcEP3006 and P{lacW}s2681  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
85E-85E  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
3-49.0 +/- 0.5
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\hyd for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0082086 FBtr0309776 FBtr0082090 FBtr0304868 FBtr0304869 FBpp0081564 FBpp0081568 FBpp0293408 FBpp0293409 FBti0037830 FBti0104061 FBti0049238 FBti0044630 FBti0051415 FBti0030257 FBti0110070 FBti0112076
Comments on Gene Model
Gene model reviewed during 5.39
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0082090
  9073
  2885
Additional Transcript Data & Comments
Reported size (kB)
9.5 (northern blot)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
hyd-PA  
FBpp0081568  
318.9  
2885  
5.73  
Additional Polypeptide Data & Comments
Reported size (kDa)
2897 (aa); 280 (kD observed)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
hyd transcripts are detected throughout development but accumulate to the highest levels in pupae.
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
western blot
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Cell fractionation studies localize hyd protein to the nucleus and cytoplasm.
Marker for
Subcellular Localization
CV Term
nucleus cytoplasm
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view dmt-RA snoRNA:dmt-a-RA hyd-RA FoxP-RC
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0002431


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0002431
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0002431 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 3448
embryo 02-04hr
 
 4882
embryo 04-06hr
 
 5109
embryo 06-08hr
 
 3943
embryo 08-10hr
 
 3706
embryo 10-12hr
 
 1742
embryo 12-14hr
 
 3022
embryo 14-16hr
 
 2250
embryo 16-18hr
 
 2131
embryo 18-20hr
 
 1250
embryo 20-22hr
 
 2702
embryo 22-24hr
 
 2720
larva L1
 
 1664
larva L2
 
 1394
larva L3 12hr old
 
 1306
larva L3 puffstage 1-2
 
 795
larva L3 puffstage 3-6
 
 1506
larva L3 puffstage 7-9
 
 1816
white prepupae new
 
 1925
white prepupae 12hr
 
 1874
white prepupae 24hr
 
 2451
pupae 2d postWPP
 
 1999
pupae 3d postWPP
 
 1361
pupae 4d postWPP
 
 828
adult male 01day
 
 1584
adult male 05day
 
 1706
adult male 30day
 
 1522
adult female 01day
 
 1682
adult female 05day
 
 2950
adult female 30day
 
 2877
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (3448)
embryo 02-04hr
 (4882)
embryo 04-06hr
 (5109)
embryo 06-08hr
 (3943)
embryo 08-10hr
 (3706)
embryo 10-12hr
 (1742)
embryo 12-14hr
 (3022)
embryo 14-16hr
 (2250)
embryo 16-18hr
 (2131)
embryo 18-20hr
 (1250)
embryo 20-22hr
 (2702)
embryo 22-24hr
 (2720)
larva L1
 (1664)
larva L2
 (1394)
larva L3 12hr old
 (1306)
larva L3 puffstage 1-2
 (795)
larva L3 puffstage 3-6
 (1506)
larva L3 puffstage 7-9
 (1816)
white prepupae new
 (1925)
white prepupae 12hr
 (1874)
white prepupae 24hr
 (2451)
pupae 2d postWPP
 (1999)
pupae 3d postWPP
 (1361)
pupae 4d postWPP
 (828)
adult male 01day
 (1584)
adult male 05day
 (1706)
adult male 30day
 (1522)
adult female 01day
 (1682)
adult female 05day
 (2950)
adult female 30day
 (2877)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (3448)
embryo 02-04hr
 (4882)
embryo 04-06hr
 (5109)
embryo 06-08hr
 (3943)
embryo 08-10hr
 (3706)
embryo 10-12hr
 (1742)
embryo 12-14hr
 (3022)
embryo 14-16hr
 (2250)
embryo 16-18hr
 (2131)
embryo 18-20hr
 
 1250
embryo 20-22hr
 (2702)
embryo 22-24hr
 (2720)
larva L1
 (1664)
larva L2
 
 1394
larva L3 12hr old
 
 1306
larva L3 puffstage 1-2
 
 795
larva L3 puffstage 3-6
 1506
larva L3 puffstage 7-9
 (1816)
white prepupae new
 (1925)
white prepupae 12hr
 (1874)
white prepupae 24hr
 (2451)
pupae 2d postWPP
 (1999)
pupae 3d postWPP
 
 1361
pupae 4d postWPP
 
 828
adult male 01day
 (1584)
adult male 05day
 (1706)
adult male 30day
 (1522)
adult female 01day
 (1682)
adult female 05day
 (2950)
adult female 30day
 (2877)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3448
embryo 02-04hr
 
 4882
embryo 04-06hr
 
 5109
embryo 06-08hr
 
 3943
embryo 08-10hr
 
 3706
embryo 10-12hr
 
 1742
embryo 12-14hr
 
 3022
embryo 14-16hr
 
 2250
embryo 16-18hr
 
 2131
embryo 18-20hr
 
 1250
embryo 20-22hr
 
 2702
embryo 22-24hr
 
 2720
larva L1
 
 1664
larva L2
 
 1394
larva L3 12hr old
 
 1306
larva L3 puffstage 1-2
 
 795
larva L3 puffstage 3-6
 
 1506
larva L3 puffstage 7-9
 
 1816
white prepupae new
 
 1925
white prepupae 12hr
 
 1874
white prepupae 24hr
 
 2451
pupae 2d postWPP
 
 1999
pupae 3d postWPP
 
 1361
pupae 4d postWPP
 
 828
adult male 01day
 
 1584
adult male 05day
 
 1706
adult male 30day
 
 1522
adult female 01day
 
 1682
adult female 05day
 
 2950
adult female 30day
 
 2877
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3448
embryo 02-04hr
 
 4882
embryo 04-06hr
 
 5109
embryo 06-08hr
 
 3943
embryo 08-10hr
 
 3706
embryo 10-12hr
 
 1742
embryo 12-14hr
 
 3022
embryo 14-16hr
 
 2250
embryo 16-18hr
 
 2131
embryo 18-20hr
 
 1250
embryo 20-22hr
 
 2702
embryo 22-24hr
 
 2720
larva L1
 
 1664
larva L2
 
 1394
larva L3 12hr old
 
 1306
larva L3 puffstage 1-2
 
 795
larva L3 puffstage 3-6
 
 1506
larva L3 puffstage 7-9
 
 1816
white prepupae new
 
 1925
white prepupae 12hr
 
 1874
white prepupae 24hr
 
 2451
pupae 2d postWPP
 
 1999
pupae 3d postWPP
 
 1361
pupae 4d postWPP
 
 828
adult male 01day
 
 1584
adult male 05day
 
 1706
adult male 30day
 
 1522
adult female 01day
 
 1682
adult female 05day
 
 2950
adult female 30day
 
 2877
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0002431 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 3448
embryo 02-04hr
 
 4882
embryo 04-06hr
 
 5109
embryo 06-08hr
 
 3943
embryo 08-10hr
 
 3706
embryo 10-12hr
 
 1742
embryo 12-14hr
 
 3022
embryo 14-16hr
 
 2250
embryo 16-18hr
 
 2131
embryo 18-20hr
 
 1250
embryo 20-22hr
 
 2702
embryo 22-24hr
 
 2720
larva L1
 
 1664
larva L2
 
 1394
larva L3 12hr old
 
 1306
larva L3 puffstage 1-2
 
 795
larva L3 puffstage 3-6
 
 1506
larva L3 puffstage 7-9
 
 1816
white prepupae new
 
 1925
white prepupae 12hr
 
 1874
white prepupae 24hr
 
 2451
pupae 2d postWPP
 
 1999
pupae 3d postWPP
 
 1361
pupae 4d postWPP
 
 828
adult male 01day
 
 1584
adult male 05day
 
 1706
adult male 30day
 
 1522
adult female 01day
 
 1682
adult female 05day
 
 2950
adult female 30day
 
 2877
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (3448)
embryo 02-04hr
 (4882)
embryo 04-06hr
 (5109)
embryo 06-08hr
 (3943)
embryo 08-10hr
 (3706)
embryo 10-12hr
 (1742)
embryo 12-14hr
 (3022)
embryo 14-16hr
 (2250)
embryo 16-18hr
 (2131)
embryo 18-20hr
 (1250)
embryo 20-22hr
 (2702)
embryo 22-24hr
 (2720)
larva L1
 (1664)
larva L2
 (1394)
larva L3 12hr old
 (1306)
larva L3 puffstage 1-2
 (795)
larva L3 puffstage 3-6
 (1506)
larva L3 puffstage 7-9
 (1816)
white prepupae new
 (1925)
white prepupae 12hr
 (1874)
white prepupae 24hr
 (2451)
pupae 2d postWPP
 (1999)
pupae 3d postWPP
 (1361)
pupae 4d postWPP
 (828)
adult male 01day
 (1584)
adult male 05day
 (1706)
adult male 30day
 (1522)
adult female 01day
 (1682)
adult female 05day
 (2950)
adult female 30day
 (2877)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (3448)
embryo 02-04hr
 (4882)
embryo 04-06hr
 (5109)
embryo 06-08hr
 (3943)
embryo 08-10hr
 (3706)
embryo 10-12hr
 1742
embryo 12-14hr
 (3022)
embryo 14-16hr
 2250
embryo 16-18hr
 2131
embryo 18-20hr
 
 1250
embryo 20-22hr
 (2702)
embryo 22-24hr
 (2720)
larva L1
 1664
larva L2
 
 1394
larva L3 12hr old
 
 1306
larva L3 puffstage 1-2
 
 795
larva L3 puffstage 3-6
 1506
larva L3 puffstage 7-9
 1816
white prepupae new
 1925
white prepupae 12hr
 1874
white prepupae 24hr
 2451
pupae 2d postWPP
 1999
pupae 3d postWPP
 
 1361
pupae 4d postWPP
 
 828
adult male 01day
 1584
adult male 05day
 1706
adult male 30day
 1522
adult female 01day
 1682
adult female 05day
 (2950)
adult female 30day
 (2877)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3448
embryo 02-04hr
 
 4882
embryo 04-06hr
 
 5109
embryo 06-08hr
 
 3943
embryo 08-10hr
 
 3706
embryo 10-12hr
 
 1742
embryo 12-14hr
 
 3022
embryo 14-16hr
 
 2250
embryo 16-18hr
 
 2131
embryo 18-20hr
 
 1250
embryo 20-22hr
 
 2702
embryo 22-24hr
 
 2720
larva L1
 
 1664
larva L2
 
 1394
larva L3 12hr old
 
 1306
larva L3 puffstage 1-2
 
 795
larva L3 puffstage 3-6
 
 1506
larva L3 puffstage 7-9
 
 1816
white prepupae new
 
 1925
white prepupae 12hr
 
 1874
white prepupae 24hr
 
 2451
pupae 2d postWPP
 
 1999
pupae 3d postWPP
 
 1361
pupae 4d postWPP
 
 828
adult male 01day
 
 1584
adult male 05day
 
 1706
adult male 30day
 
 1522
adult female 01day
 
 1682
adult female 05day
 
 2950
adult female 30day
 
 2877
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3448
embryo 02-04hr
 
 4882
embryo 04-06hr
 
 5109
embryo 06-08hr
 
 3943
embryo 08-10hr
 
 3706
embryo 10-12hr
 
 1742
embryo 12-14hr
 
 3022
embryo 14-16hr
 
 2250
embryo 16-18hr
 
 2131
embryo 18-20hr
 
 1250
embryo 20-22hr
 
 2702
embryo 22-24hr
 
 2720
larva L1
 
 1664
larva L2
 
 1394
larva L3 12hr old
 
 1306
larva L3 puffstage 1-2
 
 795
larva L3 puffstage 3-6
 
 1506
larva L3 puffstage 7-9
 
 1816
white prepupae new
 
 1925
white prepupae 12hr
 
 1874
white prepupae 24hr
 
 2451
pupae 2d postWPP
 
 1999
pupae 3d postWPP
 
 1361
pupae 4d postWPP
 
 828
adult male 01day
 
 1584
adult male 05day
 
 1706
adult male 30day
 
 1522
adult female 01day
 
 1682
adult female 05day
 
 2950
adult female 30day
 
 2877
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0002431


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0002431
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval central nervous system, adult crop, adult Malpighian tubules, larval/adult salivary gland, larval trachea, adult ovary, adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, larval/adult midgut, larval/adult hindgut, larval Malpighian tubules, adult heart, larval/adult fat body, adult spermathecae, adult male accessory gland, larval/adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0002431 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 606.925
Larval Midgut
 
 255
Larval Hindgut
 
 374.2
Larval Malpighian Tubules
 
 473.4
Larval Fat Body
 
 267.5
Larval Salivary Gland
 
 595.6
Larval Trachea
 
 518.125
Larval Carcass
 
 338.85
Adult Head
 
 341.2
Adult Eye
 
 303.675
Adult Brain
 
 473.5
Adult Thoracic-Abdominal Ganglion
 
 344.4
Adult Crop
 
 523.8
Adult Midgut
 
 306.2
Adult Hindgut
 
 416.3
Adult Malpighian Tubules
 
 604.4
Adult Fat Body
 
 487.6
Adult Salivary Gland
 
 726
Adult Heart
 
 434.1
Adult VirginFemale Spermatheca
 
 260.3
Adult InseminatedFemale Spermatheca
 
 283.5
Adult Ovary
 
 756.2
Adult Testis
 
 570.9
Adult Male Accessory Gland
 
 467.5
Adult Carcass
 
 312.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (606.925)
Larval Midgut
 
 255
Larval Hindgut
 
 374.2
Larval Malpighian Tubules
 
 473.4
Larval Fat Body
 
 267.5
Larval Salivary Gland
 (595.6)
Larval Trachea
 518.125
Larval Carcass
 
 338.85
Adult Head
 
 341.2
Adult Eye
 
 303.675
Adult Brain
 
 473.5
Adult Thoracic-Abdominal Ganglion
 
 344.4
Adult Crop
 523.8
Adult Midgut
 
 306.2
Adult Hindgut
 
 416.3
Adult Malpighian Tubules
 (604.4)
Adult Fat Body
 
 487.6
Adult Salivary Gland
 (726)
Adult Heart
 
 434.1
Adult VirginFemale Spermatheca
 
 260.3
Adult InseminatedFemale Spermatheca
 
 283.5
Adult Ovary
 (756.2)
Adult Testis
 (570.9)
Adult Male Accessory Gland
 
 467.5
Adult Carcass
 
 312.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 606.925
Larval Midgut
 
 255
Larval Hindgut
 
 374.2
Larval Malpighian Tubules
 
 473.4
Larval Fat Body
 
 267.5
Larval Salivary Gland
 
 595.6
Larval Trachea
 
 518.125
Larval Carcass
 
 338.85
Adult Head
 
 341.2
Adult Eye
 
 303.675
Adult Brain
 
 473.5
Adult Thoracic-Abdominal Ganglion
 
 344.4
Adult Crop
 
 523.8
Adult Midgut
 
 306.2
Adult Hindgut
 
 416.3
Adult Malpighian Tubules
 
 604.4
Adult Fat Body
 
 487.6
Adult Salivary Gland
 
 726
Adult Heart
 
 434.1
Adult VirginFemale Spermatheca
 
 260.3
Adult InseminatedFemale Spermatheca
 
 283.5
Adult Ovary
 
 756.2
Adult Testis
 
 570.9
Adult Male Accessory Gland
 
 467.5
Adult Carcass
 
 312.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 606.925
Larval Midgut
 
 255
Larval Hindgut
 
 374.2
Larval Malpighian Tubules
 
 473.4
Larval Fat Body
 
 267.5
Larval Salivary Gland
 
 595.6
Larval Trachea
 
 518.125
Larval Carcass
 
 338.85
Adult Head
 
 341.2
Adult Eye
 
 303.675
Adult Brain
 
 473.5
Adult Thoracic-Abdominal Ganglion
 
 344.4
Adult Crop
 
 523.8
Adult Midgut
 
 306.2
Adult Hindgut
 
 416.3
Adult Malpighian Tubules
 
 604.4
Adult Fat Body
 
 487.6
Adult Salivary Gland
 
 726
Adult Heart
 
 434.1
Adult VirginFemale Spermatheca
 
 260.3
Adult InseminatedFemale Spermatheca
 
 283.5
Adult Ovary
 
 756.2
Adult Testis
 
 570.9
Adult Male Accessory Gland
 
 467.5
Adult Carcass
 
 312.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0002431 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 606.925
Larval Midgut
 
 255
Larval Hindgut
 
 374.2
Larval Malpighian Tubules
 
 473.4
Larval Fat Body
 
 267.5
Larval Salivary Gland
 
 595.6
Larval Trachea
 
 518.125
Larval Carcass
 
 338.85
Adult Head
 
 341.2
Adult Eye
 
 303.675
Adult Brain
 
 473.5
Adult Thoracic-Abdominal Ganglion
 
 344.4
Adult Crop
 
 523.8
Adult Midgut
 
 306.2
Adult Hindgut
 
 416.3
Adult Malpighian Tubules
 
 604.4
Adult Fat Body
 
 487.6
Adult Salivary Gland
 
 726
Adult Heart
 
 434.1
Adult VirginFemale Spermatheca
 
 260.3
Adult InseminatedFemale Spermatheca
 
 283.5
Adult Ovary
 
 756.2
Adult Testis
 
 570.9
Adult Male Accessory Gland
 
 467.5
Adult Carcass
 
 312.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 606.925
Larval Midgut
 
 255
Larval Hindgut
 
 374.2
Larval Malpighian Tubules
 
 473.4
Larval Fat Body
 
 267.5
Larval Salivary Gland
 595.6
Larval Trachea
 518.125
Larval Carcass
 
 338.85
Adult Head
 
 341.2
Adult Eye
 
 303.675
Adult Brain
 
 473.5
Adult Thoracic-Abdominal Ganglion
 
 344.4
Adult Crop
 523.8
Adult Midgut
 
 306.2
Adult Hindgut
 
 416.3
Adult Malpighian Tubules
 604.4
Adult Fat Body
 
 487.6
Adult Salivary Gland
 726
Adult Heart
 
 434.1
Adult VirginFemale Spermatheca
 
 260.3
Adult InseminatedFemale Spermatheca
 
 283.5
Adult Ovary
 756.2
Adult Testis
 570.9
Adult Male Accessory Gland
 
 467.5
Adult Carcass
 
 312.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 606.925
Larval Midgut
 
 255
Larval Hindgut
 
 374.2
Larval Malpighian Tubules
 
 473.4
Larval Fat Body
 
 267.5
Larval Salivary Gland
 
 595.6
Larval Trachea
 
 518.125
Larval Carcass
 
 338.85
Adult Head
 
 341.2
Adult Eye
 
 303.675
Adult Brain
 
 473.5
Adult Thoracic-Abdominal Ganglion
 
 344.4
Adult Crop
 
 523.8
Adult Midgut
 
 306.2
Adult Hindgut
 
 416.3
Adult Malpighian Tubules
 
 604.4
Adult Fat Body
 
 487.6
Adult Salivary Gland
 
 726
Adult Heart
 
 434.1
Adult VirginFemale Spermatheca
 
 260.3
Adult InseminatedFemale Spermatheca
 
 283.5
Adult Ovary
 
 756.2
Adult Testis
 
 570.9
Adult Male Accessory Gland
 
 467.5
Adult Carcass
 
 312.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 606.925
Larval Midgut
 
 255
Larval Hindgut
 
 374.2
Larval Malpighian Tubules
 
 473.4
Larval Fat Body
 
 267.5
Larval Salivary Gland
 
 595.6
Larval Trachea
 
 518.125
Larval Carcass
 
 338.85
Adult Head
 
 341.2
Adult Eye
 
 303.675
Adult Brain
 
 473.5
Adult Thoracic-Abdominal Ganglion
 
 344.4
Adult Crop
 
 523.8
Adult Midgut
 
 306.2
Adult Hindgut
 
 416.3
Adult Malpighian Tubules
 
 604.4
Adult Fat Body
 
 487.6
Adult Salivary Gland
 
 726
Adult Heart
 
 434.1
Adult VirginFemale Spermatheca
 
 260.3
Adult InseminatedFemale Spermatheca
 
 283.5
Adult Ovary
 
 756.2
Adult Testis
 
 570.9
Adult Male Accessory Gland
 
 467.5
Adult Carcass
 
 312.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 341.2
 
NA 
Eye
 
 303.675
 
NA 
Brain
 
 473.5
 
606.925 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 344.4
 
NA 
Crop
 
 523.8
 
255 
Midgut
 
 306.2
 
374.2 
Hindgut
 
 416.3
 
473.4 
Malpighian Tubules
 
 604.4
 
267.5 
Fat Body
 
 487.6
 
595.6 
Salivary Gland
 
 726
 
NA 
Heart
 
 434.1
 
518.125 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 260.3
 
NA 
InseminatedFemale Spermatheca
 
 283.5
 
NA 
Ovary
 
 756.2
 
NA 
Testis
 
 570.9
 
NA 
Male Accessory Gland
 
 467.5
 
338.85 
Carcass
 
 312.7

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
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hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 41 )
For All Classical Alleles Show

Allele of hydClassMutagenStocksKnown lesion
hyd152 --
hydC017
1 --
hyd14amorphic allele - genetic evidence0 Yes
hyd8amorphic allele - genetic evidence0 --
hyd100 --
hyd110 --
hyd120 --
hyd13loss of function allele0 --
hyd160 --
hyd170 --
hyd180 --
hyd190 --
hyd10 --
hyd200 --
hyd210 --
hyd220 --
hyd230 --
hyd240 --
hyd250 --
hyd260 --
hyd280 --
hyd290 --
hyd20 --
hyd300 --
hyd310 --
hyd320 --
hyd330 --
hyd340 Yes
hyd350 Yes
hyd360 Yes
hyd370 --
hyd30 --
hyd40 --
hyd50 --
hyd60 --
hyd70 --
hyd90 --
hydhs1
0 --
hydK3.5
0 --
hydK7.19
0 --
hydunspecified
0 --
hide Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show

Allele of hydClassMutagenStocksKnown lesion
hydGD142272 Yes
hydHMS003431 Yes
hide Aneuploid Aberrations
Disrupted in
Not disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
miscellaneous insertions
hide Gene Ontology: Function, Process & Cellular Component ( 19 unique terms )
hide Terms Based on Experimental Evidence ( 9 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
Cellular Component
CV term
References
inferred from direct assay
inferred from direct assay
hide Terms Based on Predictions or Assertions ( 12 terms )
Molecular Function
CV term
References
inferred from electronic annotation with InterPro:IPR002004
inferred from sequence or structural similarity
inferred from sequence or structural similarity with mouse Nedd4
non-traceable author statement
inferred from electronic annotation with InterPro:IPR003126
Biological Process
CV term
References
non-traceable author statement
non-traceable author statement
Cellular Component
CV term
References
non-traceable author statement
hide Sequence Ontology: Class of Gene
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hide Summary of Physical Interactions
Protein-protein
Interacting group
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Interacts with
Please look at the allele data for full details of the genetic interactions
hyd allele
Gene
References
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Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
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hide Stocks Listed in FlyBase ( 6 )
Bloomington
Kyoto
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 77 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
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Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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Source for database identity of
Source for identity of: hyd l(3)SG33
Source for database merge of
Additional comments
Also a series of P-element induced alleles recovered by Cheney.
 
hide Other Comments
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
Cells in the eye disc that are mutant for hyd ectopically express dpp and hh in anterior regions of the disc, leading to premature photoreceptor differentiation and overgrowth of surrounding tissue.
Mutants display hyperplastic phenotype, with imaginal disc overgrowth.
Endocrine mechanisms responsible for the prolongation of larval life in hyd mutants were investigated: results suggest that delayed pupariation is caused by the overgrown imaginal discs inhibiting the production or release of ecdysteroids from the endocrine system.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 14 )
Reported As
Symbol Synonym
l(3)85Ea
 
l(3)SG33
 
Name Synonym
Secondary FlyBase IDs
  • FBgn0002317
hide References ( 76 )
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hide Recent research papers ( 4 )
Grusche et al., 2011, Dev. Biol. 350(2): 255--266
The Salvador/Warts/Hippo pathway controls regenerative tissue growth in Drosophila melanogaster. [FBrf0212888]
Jia et al., 2010, J. Biol. Chem. 285(48): 37218--37226
Casein kinase 2 promotes Hedgehog signaling by regulating both smoothened and Cubitus interruptus. [FBrf0214177]
Pertceva et al., 2010, Cell Biol. Int. 34(10): 991--996
The role of Drosophila hyperplastic discs gene in spermatogenesis. [FBrf0211767]
Pospisilik et al., 2010, Cell 140(1): 148--160
Drosophila genome-wide obesity screen reveals hedgehog as a determinant of brown versus white adipose cell fate. [FBrf0212676]
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All reviews listed in FlyBase were published before 2010