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Gene Dmel\Mal-A1

General Information
Symbol	Dmel\Mal-A1	Species	D. melanogaster
Name	Maltase A1	Annotation symbol	CG8696
Feature type	protein_coding_gene	FlyBase ID	FBgn0002570
Gene Model Status	Current	Stock availability	4 publicly available
Also Known As	LvpH, H, mal_A1
Genomic Location
Chromosome (arm)	2R	Recombination map
Cytogenetic map	44D1-44D1	Sequence location	2R:4,337,169..4,339,409 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Maltase A1 is referred to in FlyBase by the symbol Dmel\Mal-A1 (CG8696, FBgn0002570). It is a protein_coding_gene from Drosophila melanogaster. It is reported to have molecular function: alpha-glucosidase activity. It is reported to be involved in the biological process: glucose metabolic process. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Glycoside hydrolase, catalytic domain; Glycoside hydrolase, family 13; Glycoside hydrolase, superfamily; Glycosyl hydrolase, family 13, catalytic domain; Glycosyl hydrolase, family 13, subfamily, catalytic domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of very low expression. Peak expression observed within 18-24 hour embryonic stages, during early larval stages, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval/adult midgut. Comments on Affy2 ProbeSet: ProbeSet 1639401_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of LvpH. Gene sequence location is 2R:4337169..4339409.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 44D1-44D1   Limits computationally determined from genome sequence between P{lacW}Rs1k09514&P{lacW}l(2)k03110k03110 and P{lacW}Vps25k08904&P{lacW}ptck02507
Experimentally Determined Cytological Location
Cytogenetic map Notes References 44D-44D   Inferred from proximity to Lcp gene cluster.   (Snyder et al., 1982)
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Mal-A1 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.49
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Mal-A1-RA FBtr0088759  NM_057279   1826   577
Additional Transcript Data & Comments
Reported size (kB)	1.7 (northern blot) (Snyder and Davidson, 1983)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Mal-A1-PA   FBpp0087838   66.4   577   4.52     NP_476627   AAF59089
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Glycosyl hydrolase, family 13, catalytic domain (IPR006047) Glycosyl hydrolase, family 13, subfamily, catalytic domain (IPR006589) Glycoside hydrolase, catalytic domain (IPR013781) Glycoside hydrolase, superfamily (IPR017853) Glycoside hydrolase, family 13 (IPR015902)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA697991   AE013599 AAF59089   AC005451   AI295803   AI386572   AI517021   AY070626   BI173333   BI228916   BI366411   BI372255   CO177254   CO194487   CO285537   CO293062   CO294532   CO340043   EC058190   EC201198   EC211450   EC224361   EC255791   EV582628   EV583038   EV584248   EV585465   EV586911   EV587592   EV589505   EV591897   EV593311   EV595043   EV598546   EV599304   EV599672   EV600284   GH759126   GH789937   GH806788   GH811910   GH843564   GH848782   GH861140   GH862753   GH865565   GH890871   GH909468   GH918391   GH934577   V00204 CAA23491
UniProtKB/Swiss-Prot	P07190
UniProtKB/TrEMBL
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences	EPD - Eukarytoic Promoter Database, an annotated collection of POL II promoters • 07033 07034
Expression Data
Transcript Expression
northern blot Stage Tissue/Position (including subcellular localization) Reference first instar larval stage     (Snyder and Davidson, 1983) second instar larval stage     (Snyder and Davidson, 1983) early third instar larval stage   organism   (Snyder and Davidson, 1983) adult stage     (Snyder and Davidson, 1983)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval/adult midgut. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    0.575 Larval Midgut    1611.9 Larval Hindgut    5.9 Larval Malpighian Tubules    4 Larval Fat Body    1.9 Larval Salivary Gland    0.7 Larval Trachea    1.55 Larval Carcass    0.95 Adult Head    35 Adult Eye    12.175 Adult Brain    1.7 Adult Thoracic-Abdominal Ganglion    1.7 Adult Crop    6.4 Adult Midgut    6005.6 Adult Hindgut    12.2 Adult Malpighian Tubules    5.1 Adult Fat Body    1.9 Adult Salivary Gland    2.5 Adult Heart    2.85 Adult VirginFemale Spermatheca    1 Adult InseminatedFemale Spermatheca    1.6 Adult Ovary    2 Adult Testis    12.2 Adult Male Accessory Gland    2.8 Adult Carcass    22.4 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    0.575 Larval Midgut  (1611.9) Larval Hindgut    5.9 Larval Malpighian Tubules    4 Larval Fat Body    1.9 Larval Salivary Gland    0.7 Larval Trachea    1.55 Larval Carcass    0.95 Adult Head    35 Adult Eye    12.175 Adult Brain    1.7 Adult Thoracic-Abdominal Ganglion    1.7 Adult Crop    6.4 Adult Midgut  (6005.6) Adult Hindgut    12.2 Adult Malpighian Tubules    5.1 Adult Fat Body    1.9 Adult Salivary Gland    2.5 Adult Heart    2.85 Adult VirginFemale Spermatheca    1 Adult InseminatedFemale Spermatheca    1.6 Adult Ovary    2 Adult Testis    12.2 Adult Male Accessory Gland    2.8 Adult Carcass    22.4 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    0.575 Larval Midgut  (1611.9) Larval Hindgut    5.9 Larval Malpighian Tubules    4 Larval Fat Body    1.9 Larval Salivary Gland    0.7 Larval Trachea    1.55 Larval Carcass    0.95 Adult Head    35 Adult Eye    12.175 Adult Brain    1.7 Adult Thoracic-Abdominal Ganglion    1.7 Adult Crop    6.4 Adult Midgut  (6005.6) Adult Hindgut    12.2 Adult Malpighian Tubules    5.1 Adult Fat Body    1.9 Adult Salivary Gland    2.5 Adult Heart    2.85 Adult VirginFemale Spermatheca    1 Adult InseminatedFemale Spermatheca    1.6 Adult Ovary    2 Adult Testis    12.2 Adult Male Accessory Gland    2.8 Adult Carcass    22.4 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    0.575 Larval Midgut    1611.9 Larval Hindgut    5.9 Larval Malpighian Tubules    4 Larval Fat Body    1.9 Larval Salivary Gland    0.7 Larval Trachea    1.55 Larval Carcass    0.95 Adult Head    35 Adult Eye    12.175 Adult Brain    1.7 Adult Thoracic-Abdominal Ganglion    1.7 Adult Crop    6.4 Adult Midgut    6005.6 Adult Hindgut    12.2 Adult Malpighian Tubules    5.1 Adult Fat Body    1.9 Adult Salivary Gland    2.5 Adult Heart    2.85 Adult VirginFemale Spermatheca    1 Adult InseminatedFemale Spermatheca    1.6 Adult Ovary    2 Adult Testis    12.2 Adult Male Accessory Gland    2.8 Adult Carcass    22.4 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    0.575 Larval Midgut    1611.9 Larval Hindgut    5.9 Larval Malpighian Tubules    4 Larval Fat Body    1.9 Larval Salivary Gland    0.7 Larval Trachea    1.55 Larval Carcass    0.95 Adult Head    35 Adult Eye    12.175 Adult Brain    1.7 Adult Thoracic-Abdominal Ganglion    1.7 Adult Crop    6.4 Adult Midgut    6005.6 Adult Hindgut    12.2 Adult Malpighian Tubules    5.1 Adult Fat Body    1.9 Adult Salivary Gland    2.5 Adult Heart    2.85 Adult VirginFemale Spermatheca    1 Adult InseminatedFemale Spermatheca    1.6 Adult Ovary    2 Adult Testis    12.2 Adult Male Accessory Gland    2.8 Adult Carcass    22.4 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    0.575 Larval Midgut  (1611.9) Larval Hindgut    5.9 Larval Malpighian Tubules    4 Larval Fat Body    1.9 Larval Salivary Gland    0.7 Larval Trachea    1.55 Larval Carcass    0.95 Adult Head    35 Adult Eye    12.175 Adult Brain    1.7 Adult Thoracic-Abdominal Ganglion    1.7 Adult Crop    6.4 Adult Midgut  (6005.6) Adult Hindgut    12.2 Adult Malpighian Tubules    5.1 Adult Fat Body    1.9 Adult Salivary Gland    2.5 Adult Heart    2.85 Adult VirginFemale Spermatheca    1 Adult InseminatedFemale Spermatheca    1.6 Adult Ovary    2 Adult Testis    12.2 Adult Male Accessory Gland    2.8 Adult Carcass    22.4 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    0.575 Larval Midgut  1611.9 Larval Hindgut    5.9 Larval Malpighian Tubules    4 Larval Fat Body    1.9 Larval Salivary Gland    0.7 Larval Trachea    1.55 Larval Carcass    0.95 Adult Head    35 Adult Eye    12.175 Adult Brain    1.7 Adult Thoracic-Abdominal Ganglion    1.7 Adult Crop    6.4 Adult Midgut  (6005.6) Adult Hindgut    12.2 Adult Malpighian Tubules    5.1 Adult Fat Body    1.9 Adult Salivary Gland    2.5 Adult Heart    2.85 Adult VirginFemale Spermatheca    1 Adult InseminatedFemale Spermatheca    1.6 Adult Ovary    2 Adult Testis    12.2 Adult Male Accessory Gland    2.8 Adult Carcass    22.4 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    0.575 Larval Midgut    1611.9 Larval Hindgut    5.9 Larval Malpighian Tubules    4 Larval Fat Body    1.9 Larval Salivary Gland    0.7 Larval Trachea    1.55 Larval Carcass    0.95 Adult Head    35 Adult Eye    12.175 Adult Brain    1.7 Adult Thoracic-Abdominal Ganglion    1.7 Adult Crop    6.4 Adult Midgut    6005.6 Adult Hindgut    12.2 Adult Malpighian Tubules    5.1 Adult Fat Body    1.9 Adult Salivary Gland    2.5 Adult Heart    2.85 Adult VirginFemale Spermatheca    1 Adult InseminatedFemale Spermatheca    1.6 Adult Ovary    2 Adult Testis    12.2 Adult Male Accessory Gland    2.8 Adult Carcass    22.4 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    35   NA  Eye    no informative data   NA  Brain    1.7   0.575  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    1.7   NA  Crop    6.4   1611.9  Midgut    6005.6   5.9  Hindgut    no informative data   4  Malpighian Tubules    5.1   1.9  Fat Body    1.9   0.7  Salivary Gland    2.5   NA  Heart    2.85   1.55  Trachea    NA   NA  VirginFemale Spermatheca    1   NA  InseminatedFemale Spermatheca    1.6   NA  Ovary    2   NA  Testis    no informative data   NA  Male Accessory Gland    2.8   0.95  Carcass    no informative data FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    58 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    1 head, virgin 4-day female    2 head, virgin 20-day female    1 head, mated 1-day female    19 head, mated 4-day female    0 head, mated 20-day female    3 head, mated 1-day male    3 head, mated 4-day male    2 head, mated 20-day male    4 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    55 digestive system, 1-day adult    2806 digestive system, 4-day adult    1945 digestive system, 20-day adult    4596 fat body, larvae L3 wandering    1 fat body, white prepupae    0 fat body, pupae P8    6 carcass, larvae L3 wandering    1 carcass, 1-day adult    43 carcass, 4-day adult    29 carcass, 20-day adult    102 ovary, virgin 4-day female    2 ovary, mated 4-day female    0 testis, mated 4-day male    51 accessory gland, mated 4-day male    101 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (58) central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    1 head, virgin 4-day female    2 head, virgin 20-day female    1 head, mated 1-day female    19 head, mated 4-day female    0 head, mated 20-day female    3 head, mated 1-day male    3 head, mated 4-day male    2 head, mated 20-day male    4 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    0 digestive system, larvae L3 wandering  (55) digestive system, 1-day adult  (2806) digestive system, 4-day adult  (1945) digestive system, 20-day adult  (4596) fat body, larvae L3 wandering    1 fat body, white prepupae    0 fat body, pupae P8    6 carcass, larvae L3 wandering    1 carcass, 1-day adult  (43) carcass, 4-day adult  (29) carcass, 20-day adult  (102) ovary, virgin 4-day female    2 ovary, mated 4-day female    0 testis, mated 4-day male  (51) accessory gland, mated 4-day male  (101) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    58 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    1 head, virgin 4-day female    2 head, virgin 20-day female    1 head, mated 1-day female    19 head, mated 4-day female    0 head, mated 20-day female    3 head, mated 1-day male    3 head, mated 4-day male    2 head, mated 20-day male    4 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    55 digestive system, 1-day adult  (2806) digestive system, 4-day adult  (1945) digestive system, 20-day adult  (4596) fat body, larvae L3 wandering    1 fat body, white prepupae    0 fat body, pupae P8    6 carcass, larvae L3 wandering    1 carcass, 1-day adult    43 carcass, 4-day adult    29 carcass, 20-day adult  102 ovary, virgin 4-day female    2 ovary, mated 4-day female    0 testis, mated 4-day male    51 accessory gland, mated 4-day male  101 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    58 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    1 head, virgin 4-day female    2 head, virgin 20-day female    1 head, mated 1-day female    19 head, mated 4-day female    0 head, mated 20-day female    3 head, mated 1-day male    3 head, mated 4-day male    2 head, mated 20-day male    4 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    55 digestive system, 1-day adult    2806 digestive system, 4-day adult    1945 digestive system, 20-day adult    4596 fat body, larvae L3 wandering    1 fat body, white prepupae    0 fat body, pupae P8    6 carcass, larvae L3 wandering    1 carcass, 1-day adult    43 carcass, 4-day adult    29 carcass, 20-day adult    102 ovary, virgin 4-day female    2 ovary, mated 4-day female    0 testis, mated 4-day male    51 accessory gland, mated 4-day male    101 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    58 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    1 head, virgin 4-day female    2 head, virgin 20-day female    1 head, mated 1-day female    19 head, mated 4-day female    0 head, mated 20-day female    3 head, mated 1-day male    3 head, mated 4-day male    2 head, mated 20-day male    4 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    55 digestive system, 1-day adult    2806 digestive system, 4-day adult    1945 digestive system, 20-day adult    4596 fat body, larvae L3 wandering    1 fat body, white prepupae    0 fat body, pupae P8    6 carcass, larvae L3 wandering    1 carcass, 1-day adult    43 carcass, 4-day adult    29 carcass, 20-day adult    102 ovary, virgin 4-day female    2 ovary, mated 4-day female    0 testis, mated 4-day male    51 accessory gland, mated 4-day male    101 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (58) central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    1 head, virgin 4-day female    2 head, virgin 20-day female    1 head, mated 1-day female    19 head, mated 4-day female    0 head, mated 20-day female    3 head, mated 1-day male    3 head, mated 4-day male    2 head, mated 20-day male    4 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    0 digestive system, larvae L3 wandering  (55) digestive system, 1-day adult  (2806) digestive system, 4-day adult  (1945) digestive system, 20-day adult  (4596) fat body, larvae L3 wandering    1 fat body, white prepupae    0 fat body, pupae P8    6 carcass, larvae L3 wandering    1 carcass, 1-day adult  (43) carcass, 4-day adult  29 carcass, 20-day adult  (102) ovary, virgin 4-day female    2 ovary, mated 4-day female    0 testis, mated 4-day male  (51) accessory gland, mated 4-day male  (101) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    58 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    1 head, virgin 4-day female    2 head, virgin 20-day female    1 head, mated 1-day female    19 head, mated 4-day female    0 head, mated 20-day female    3 head, mated 1-day male    3 head, mated 4-day male    2 head, mated 20-day male    4 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    55 digestive system, 1-day adult  (2806) digestive system, 4-day adult  (1945) digestive system, 20-day adult  (4596) fat body, larvae L3 wandering    1 fat body, white prepupae    0 fat body, pupae P8    6 carcass, larvae L3 wandering    1 carcass, 1-day adult    43 carcass, 4-day adult    29 carcass, 20-day adult  102 ovary, virgin 4-day female    2 ovary, mated 4-day female    0 testis, mated 4-day male    51 accessory gland, mated 4-day male  101 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    58 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    1 head, virgin 4-day female    2 head, virgin 20-day female    1 head, mated 1-day female    19 head, mated 4-day female    0 head, mated 20-day female    3 head, mated 1-day male    3 head, mated 4-day male    2 head, mated 20-day male    4 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    55 digestive system, 1-day adult    2806 digestive system, 4-day adult    1945 digestive system, 20-day adult    4596 fat body, larvae L3 wandering    1 fat body, white prepupae    0 fat body, pupae P8    6 carcass, larvae L3 wandering    1 carcass, 1-day adult    43 carcass, 4-day adult    29 carcass, 20-day adult    102 ovary, virgin 4-day female    2 ovary, mated 4-day female    0 testis, mated 4-day male    51 accessory gland, mated 4-day male    101 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of very low expression. Peak expression observed within 18-24 hour embryonic stages, during early larval stages, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    1 embryo 08-10hr    5 embryo 10-12hr    13 embryo 12-14hr    8 embryo 14-16hr    3 embryo 16-18hr    2 embryo 18-20hr    31 embryo 20-22hr    184 embryo 22-24hr    224 larva L1    275 larva L2    354 larva L3 12hr old    182 larva L3 puffstage 1-2    57 larva L3 puffstage 3-6    25 larva L3 puffstage 7-9    7 white prepupae new    3 white prepupae 12hr    1 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    92 adult male 01day    489 adult male 05day    432 adult male 30day    588 adult female 01day    365 adult female 05day    103 adult female 30day    76 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    1 embryo 08-10hr    5 embryo 10-12hr    13 embryo 12-14hr    8 embryo 14-16hr    3 embryo 16-18hr    2 embryo 18-20hr  (31) embryo 20-22hr  (184) embryo 22-24hr  (224) larva L1  (275) larva L2  (354) larva L3 12hr old  (182) larva L3 puffstage 1-2  (57) larva L3 puffstage 3-6    25 larva L3 puffstage 7-9    7 white prepupae new    3 white prepupae 12hr    1 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP  (92) adult male 01day  (489) adult male 05day  (432) adult male 30day  (588) adult female 01day  (365) adult female 05day  (103) adult female 30day  (76) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    1 embryo 08-10hr    5 embryo 10-12hr    13 embryo 12-14hr    8 embryo 14-16hr    3 embryo 16-18hr    2 embryo 18-20hr    31 embryo 20-22hr  (184) embryo 22-24hr  (224) larva L1  (275) larva L2  (354) larva L3 12hr old  (182) larva L3 puffstage 1-2    57 larva L3 puffstage 3-6    25 larva L3 puffstage 7-9    7 white prepupae new    3 white prepupae 12hr    1 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    92 adult male 01day  (489) adult male 05day  (432) adult male 30day  (588) adult female 01day  (365) adult female 05day  103 adult female 30day    76 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    1 embryo 08-10hr    5 embryo 10-12hr    13 embryo 12-14hr    8 embryo 14-16hr    3 embryo 16-18hr    2 embryo 18-20hr    31 embryo 20-22hr    184 embryo 22-24hr    224 larva L1    275 larva L2    354 larva L3 12hr old    182 larva L3 puffstage 1-2    57 larva L3 puffstage 3-6    25 larva L3 puffstage 7-9    7 white prepupae new    3 white prepupae 12hr    1 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    92 adult male 01day    489 adult male 05day    432 adult male 30day    588 adult female 01day    365 adult female 05day    103 adult female 30day    76 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    1 embryo 08-10hr    5 embryo 10-12hr    13 embryo 12-14hr    8 embryo 14-16hr    3 embryo 16-18hr    2 embryo 18-20hr    31 embryo 20-22hr    184 embryo 22-24hr    224 larva L1    275 larva L2    354 larva L3 12hr old    182 larva L3 puffstage 1-2    57 larva L3 puffstage 3-6    25 larva L3 puffstage 7-9    7 white prepupae new    3 white prepupae 12hr    1 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    92 adult male 01day    489 adult male 05day    432 adult male 30day    588 adult female 01day    365 adult female 05day    103 adult female 30day    76 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    1 embryo 08-10hr    5 embryo 10-12hr    13 embryo 12-14hr    8 embryo 14-16hr    3 embryo 16-18hr    2 embryo 18-20hr  31 embryo 20-22hr  (184) embryo 22-24hr  (224) larva L1  (275) larva L2  (354) larva L3 12hr old  (182) larva L3 puffstage 1-2  (57) larva L3 puffstage 3-6    25 larva L3 puffstage 7-9    7 white prepupae new    3 white prepupae 12hr    1 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP  (92) adult male 01day  (489) adult male 05day  (432) adult male 30day  (588) adult female 01day  (365) adult female 05day  (103) adult female 30day  (76) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    1 embryo 08-10hr    5 embryo 10-12hr    13 embryo 12-14hr    8 embryo 14-16hr    3 embryo 16-18hr    2 embryo 18-20hr    31 embryo 20-22hr  (184) embryo 22-24hr  (224) larva L1  (275) larva L2  (354) larva L3 12hr old  (182) larva L3 puffstage 1-2    57 larva L3 puffstage 3-6    25 larva L3 puffstage 7-9    7 white prepupae new    3 white prepupae 12hr    1 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    92 adult male 01day  (489) adult male 05day  (432) adult male 30day  (588) adult female 01day  (365) adult female 05day  103 adult female 30day    76 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    1 embryo 08-10hr    5 embryo 10-12hr    13 embryo 12-14hr    8 embryo 14-16hr    3 embryo 16-18hr    2 embryo 18-20hr    31 embryo 20-22hr    184 embryo 22-24hr    224 larva L1    275 larva L2    354 larva L3 12hr old    182 larva L3 puffstage 1-2    57 larva L3 puffstage 3-6    25 larva L3 puffstage 7-9    7 white prepupae new    3 white prepupae 12hr    1 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    92 adult male 01day    489 adult male 05day    432 adult male 30day    588 adult female 01day    365 adult female 05day    103 adult female 30day    76 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    0 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    0 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    0 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    0 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    1 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    0 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    0 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    0 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    0 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    142 cold shock, 4-day adult    48 heat shock, 4-day adult    180 Cadmium 50 mM 6 hrs, larvae L3    318 Cadmium 50 mM 12 hrs, larvae L3    83 Cadmium 50 mM 48 hrs, 4-day adult    305 Cadmium 100 mM 48 hrs, 4-day adult    118 Copper 0.5 mM 12 hrs, larvae L3    36 Copper 15 mM 48 hrs, 4-day adult    75 Zinc 5 mM 12 hrs, larvae L3    58 Zinc 4.5 mM 48 hrs, 4-day adult    303 Ethanol 2.5% 3 hrs, larvae L3    149 Ethanol 5% 3 hrs, larvae L3    503 Ethanol 10% 3 hrs, larvae L3    313 Caffeine 1.5 mg/ml 4 hrs, larvae L3    464 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    700 Caffeine 25 mg/ml 48 hrs, 4-day adult    158 Paraquat 5 mM 48 hrs, 4-day adult    315 Paraquat 10 mM 48 hrs, 4-day adult    1939 Rotenone 2 μg 12 hrs, larvae L3    403 Rotenone 8 μg 12 hrs, larvae L3    227 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  (142) cold shock, 4-day adult  (48) heat shock, 4-day adult  (180) Cadmium 50 mM 6 hrs, larvae L3  (318) Cadmium 50 mM 12 hrs, larvae L3  (83) Cadmium 50 mM 48 hrs, 4-day adult  (305) Cadmium 100 mM 48 hrs, 4-day adult  (118) Copper 0.5 mM 12 hrs, larvae L3  (36) Copper 15 mM 48 hrs, 4-day adult  (75) Zinc 5 mM 12 hrs, larvae L3  (58) Zinc 4.5 mM 48 hrs, 4-day adult  (303) Ethanol 2.5% 3 hrs, larvae L3  (149) Ethanol 5% 3 hrs, larvae L3  (503) Ethanol 10% 3 hrs, larvae L3  (313) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (464) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (700) Caffeine 25 mg/ml 48 hrs, 4-day adult  (158) Paraquat 5 mM 48 hrs, 4-day adult  (315) Paraquat 10 mM 48 hrs, 4-day adult  (1939) Rotenone 2 μg 12 hrs, larvae L3  (403) Rotenone 8 μg 12 hrs, larvae L3  (227) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult  (142) cold shock, 4-day adult    48 heat shock, 4-day adult  (180) Cadmium 50 mM 6 hrs, larvae L3  (318) Cadmium 50 mM 12 hrs, larvae L3    83 Cadmium 50 mM 48 hrs, 4-day adult  (305) Cadmium 100 mM 48 hrs, 4-day adult  (118) Copper 0.5 mM 12 hrs, larvae L3    36 Copper 15 mM 48 hrs, 4-day adult    75 Zinc 5 mM 12 hrs, larvae L3    58 Zinc 4.5 mM 48 hrs, 4-day adult  (303) Ethanol 2.5% 3 hrs, larvae L3  (149) Ethanol 5% 3 hrs, larvae L3  (503) Ethanol 10% 3 hrs, larvae L3  (313) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (464) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (700) Caffeine 25 mg/ml 48 hrs, 4-day adult  (158) Paraquat 5 mM 48 hrs, 4-day adult  (315) Paraquat 10 mM 48 hrs, 4-day adult  (1939) Rotenone 2 μg 12 hrs, larvae L3  (403) Rotenone 8 μg 12 hrs, larvae L3  (227) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    142 cold shock, 4-day adult    48 heat shock, 4-day adult    180 Cadmium 50 mM 6 hrs, larvae L3    318 Cadmium 50 mM 12 hrs, larvae L3    83 Cadmium 50 mM 48 hrs, 4-day adult    305 Cadmium 100 mM 48 hrs, 4-day adult    118 Copper 0.5 mM 12 hrs, larvae L3    36 Copper 15 mM 48 hrs, 4-day adult    75 Zinc 5 mM 12 hrs, larvae L3    58 Zinc 4.5 mM 48 hrs, 4-day adult    303 Ethanol 2.5% 3 hrs, larvae L3    149 Ethanol 5% 3 hrs, larvae L3    503 Ethanol 10% 3 hrs, larvae L3    313 Caffeine 1.5 mg/ml 4 hrs, larvae L3    464 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    700 Caffeine 25 mg/ml 48 hrs, 4-day adult    158 Paraquat 5 mM 48 hrs, 4-day adult    315 Paraquat 10 mM 48 hrs, 4-day adult    1939 Rotenone 2 μg 12 hrs, larvae L3    403 Rotenone 8 μg 12 hrs, larvae L3    227 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    142 cold shock, 4-day adult    48 heat shock, 4-day adult    180 Cadmium 50 mM 6 hrs, larvae L3    318 Cadmium 50 mM 12 hrs, larvae L3    83 Cadmium 50 mM 48 hrs, 4-day adult    305 Cadmium 100 mM 48 hrs, 4-day adult    118 Copper 0.5 mM 12 hrs, larvae L3    36 Copper 15 mM 48 hrs, 4-day adult    75 Zinc 5 mM 12 hrs, larvae L3    58 Zinc 4.5 mM 48 hrs, 4-day adult    303 Ethanol 2.5% 3 hrs, larvae L3    149 Ethanol 5% 3 hrs, larvae L3    503 Ethanol 10% 3 hrs, larvae L3    313 Caffeine 1.5 mg/ml 4 hrs, larvae L3    464 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    700 Caffeine 25 mg/ml 48 hrs, 4-day adult    158 Paraquat 5 mM 48 hrs, 4-day adult    315 Paraquat 10 mM 48 hrs, 4-day adult    1939 Rotenone 2 μg 12 hrs, larvae L3    403 Rotenone 8 μg 12 hrs, larvae L3    227 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  (142) cold shock, 4-day adult  (48) heat shock, 4-day adult  (180) Cadmium 50 mM 6 hrs, larvae L3  (318) Cadmium 50 mM 12 hrs, larvae L3  (83) Cadmium 50 mM 48 hrs, 4-day adult  (305) Cadmium 100 mM 48 hrs, 4-day adult  (118) Copper 0.5 mM 12 hrs, larvae L3  (36) Copper 15 mM 48 hrs, 4-day adult  (75) Zinc 5 mM 12 hrs, larvae L3  (58) Zinc 4.5 mM 48 hrs, 4-day adult  (303) Ethanol 2.5% 3 hrs, larvae L3  (149) Ethanol 5% 3 hrs, larvae L3  (503) Ethanol 10% 3 hrs, larvae L3  (313) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (464) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (700) Caffeine 25 mg/ml 48 hrs, 4-day adult  (158) Paraquat 5 mM 48 hrs, 4-day adult  (315) Paraquat 10 mM 48 hrs, 4-day adult  (1939) Rotenone 2 μg 12 hrs, larvae L3  (403) Rotenone 8 μg 12 hrs, larvae L3  (227) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult  142 cold shock, 4-day adult    48 heat shock, 4-day adult  (180) Cadmium 50 mM 6 hrs, larvae L3  (318) Cadmium 50 mM 12 hrs, larvae L3    83 Cadmium 50 mM 48 hrs, 4-day adult  (305) Cadmium 100 mM 48 hrs, 4-day adult  118 Copper 0.5 mM 12 hrs, larvae L3    36 Copper 15 mM 48 hrs, 4-day adult    75 Zinc 5 mM 12 hrs, larvae L3    58 Zinc 4.5 mM 48 hrs, 4-day adult  (303) Ethanol 2.5% 3 hrs, larvae L3  (149) Ethanol 5% 3 hrs, larvae L3  (503) Ethanol 10% 3 hrs, larvae L3  (313) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (464) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (700) Caffeine 25 mg/ml 48 hrs, 4-day adult  (158) Paraquat 5 mM 48 hrs, 4-day adult  (315) Paraquat 10 mM 48 hrs, 4-day adult  (1939) Rotenone 2 μg 12 hrs, larvae L3  (403) Rotenone 8 μg 12 hrs, larvae L3  (227) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    142 cold shock, 4-day adult    48 heat shock, 4-day adult    180 Cadmium 50 mM 6 hrs, larvae L3    318 Cadmium 50 mM 12 hrs, larvae L3    83 Cadmium 50 mM 48 hrs, 4-day adult    305 Cadmium 100 mM 48 hrs, 4-day adult    118 Copper 0.5 mM 12 hrs, larvae L3    36 Copper 15 mM 48 hrs, 4-day adult    75 Zinc 5 mM 12 hrs, larvae L3    58 Zinc 4.5 mM 48 hrs, 4-day adult    303 Ethanol 2.5% 3 hrs, larvae L3    149 Ethanol 5% 3 hrs, larvae L3    503 Ethanol 10% 3 hrs, larvae L3    313 Caffeine 1.5 mg/ml 4 hrs, larvae L3    464 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    700 Caffeine 25 mg/ml 48 hrs, 4-day adult    158 Paraquat 5 mM 48 hrs, 4-day adult    315 Paraquat 10 mM 48 hrs, 4-day adult    1939 Rotenone 2 μg 12 hrs, larvae L3    403 Rotenone 8 μg 12 hrs, larvae L3    227 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_20 mE1_20_mRNA_expression_cluster_16
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0002570 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG8696-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 Mal-A1GD5459 Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of Mal-A1 Class Mutagen Stocks Known lesion Mal-A1MB05107 1 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Mal-A1 Class Mutagen Stocks Known lesion Mal-A1GD5459 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes Mal-A1KK105272 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Mal-A1NIG.8696R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(2R)Exel7096 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{NIG.8696R} NA
Insertions
	Type of insertions Name Expression data insertion of enhancer trap binary system Mi{ET1}Mal-A1MB05107 No
Gene Ontology: Function, Process & Cellular Component ( 5 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 5 terms )
Molecular Function
CV term Evidence References
alpha-glucosidase activity non-traceable author statement (Swiss-Prot Project Members, 1988.4.1) catalytic activity inferred from electronic annotation with InterPro:IPR006047, InterPro:IPR006589, InterPro:IPR013780, InterPro:IPR013781 (FlyBase Curators et al., 2004-) cation binding inferred from electronic annotation with InterPro:IPR006047, InterPro:IPR006589, InterPro:IPR013780, InterPro:IPR013781 (FlyBase Curators et al., 2004-)
Biological Process
CV term Evidence References
carbohydrate metabolic process inferred from electronic annotation with InterPro:IPR006047, InterPro:IPR006589, InterPro:IPR013780, InterPro:IPR013781 (FlyBase Curators et al., 2004-) glucose metabolic process non-traceable author statement (Swiss-Prot Project Members, 1988.4.1)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	gene_with_edited_transcript (Graveley et al., 2011) nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Mal-A1 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 61676 DroID - A comprehensive database of gene and protein interactions. • FBgn0002570 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 35824
Orthologs
OrthoDB Orthologs (65) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6TXCBF Dipteran inclusive ortholog search No orthologs identified Insect inclusive ortholog search EOG6RFJNQ Arthropod inclusive ortholog search EOG6612K6 Metazoa inclusive ortholog search EOG6XDGK6
Orthologs in Drosophila Species (EOG6TXCBF)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\Mal-A1     Drosophila simulans   Dsim\Mal-A1 Y   Drosophila sechellia   Dsec\Mal-A1 Y   Drosophila erecta   Dere\Mal-A1 Y   Drosophila yakuba   Dyak\Mal-A1 Y   Drosophila ananassae   Dana\Mal-A1 Y   Drosophila pseudoobscura pseudoobscura   Dpse\Mal-A1 Y   Drosophila persimilis   Dper\Mal-A1 Y   Drosophila willistoni   Dwil\Mal-A1 Y   Drosophila virilis   Dvir\Mal-A1 Y   Drosophila mojavensis   Dmoj\Mal-A1 Y   Drosophila grimshawi   Dgri\Mal-A1 Y
Orthologs in non-Drosophila Dipterans (None identified)
No non-Drosophilid orthologies identified
Orthologs in non-Dipteran Insects (EOG6RFJNQ)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\hbg1 Y Apis mellifera Western honey bee  Amel\GB54549 Y Apis mellifera Western honey bee  Amel\GB43247 Y Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG002670 Y Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG004884 Y Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG004882 Y Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG013755 Y Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG013754 Y Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG002671 Y Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG016364 Y Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH26714 Y Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH21222 Y Atta cephalotes Leafcutter ant  Acep\ACEP20326 Y Atta cephalotes Leafcutter ant  Acep\ACEP22714 Y Camponotus floridanus Florida carpenter ant  Cflo\CFLO20794 Y Camponotus floridanus Florida carpenter ant  Cflo\CFLO23600 Y Camponotus floridanus Florida carpenter ant  Cflo\CFLO15056 Y Camponotus floridanus Florida carpenter ant  Cflo\CFLO15057 Y Camponotus floridanus Florida carpenter ant  Cflo\CFLO20792 Y Camponotus floridanus Florida carpenter ant  Cflo\CFLO15942 Y Camponotus floridanus Florida carpenter ant  Cflo\CFLO15944 Y Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL15977 Y Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL18504 Y Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL15976 Y Linepithema humile Argentine ant  Lhum\LH18070 Y Linepithema humile Argentine ant  Lhum\LH19163 Y Linepithema humile Argentine ant  Lhum\LH24003 Y Linepithema humile Argentine ant  Lhum\LH24002 Y Linepithema humile Argentine ant  Lhum\LH19162 Y Pogonomyrmex barbatus Red harvester ant  Pbar\PB12187 Y Pogonomyrmex barbatus Red harvester ant  Pbar\PB25255 Y Pogonomyrmex barbatus Red harvester ant  Pbar\PB12189 Y Pogonomyrmex barbatus Red harvester ant  Pbar\PB18852 Y Pogonomyrmex barbatus Red harvester ant  Pbar\PB24189 Y Solenopsis invicta Red fire ant  Sinv\SINV18722 Y Solenopsis invicta Red fire ant  Sinv\SINV12248 Y Solenopsis invicta Red fire ant  Sinv\SINV22164 Y Acyrthosiphon pisum Pea aphid  Apim\ACYPI009042 Y Acyrthosiphon pisum Pea aphid  Apim\ACYPI000768 Y Acyrthosiphon pisum Pea aphid  Apim\S1 Y Acyrthosiphon pisum Pea aphid  Apim\ACYPI007467 Y Acyrthosiphon pisum Pea aphid  Apim\ACYPI002659 Y Bombyx mori Silkmoth  Bmor\BGIBMGA003056 Y Bombyx mori Silkmoth  Bmor\Bmo.13277 Y Bombyx mori Silkmoth  Bmor\BGIBMGA006066 Y Bombyx mori Silkmoth  Bmor\BGIBMGA003057 Y Pediculus humanus Human body louse  Phum\PHUM308690 Y Tribolium castaneum Red flour beetle  Tcas\GLEAN_08357 Y Tribolium castaneum Red flour beetle  Tcas\GLEAN_08359 Y Tribolium castaneum Red flour beetle  Tcas\GLEAN_08358 Y
Orthologs in non-Insect Arthropods (EOG6612K6)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\hsp60 Y
Orthologs in non-Arthropod Metazoa (EOG6XDGK6)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\atgp-1 Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_013735gn Y
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\Mal-A1 Drosophila sechellia Dsec\Mal-A1 Drosophila erecta Dere\Mal-A1 Drosophila yakuba Dyak\Mal-A1 Drosophila ananassae Dana\Mal-A1 Drosophila pseudoobscura pseudoobscura Dpse\Mal-A1 Drosophila persimilis Dper\Mal-A1 Drosophila willistoni Dwil\Mal-A1 Drosophila virilis Dvir\Mal-A1 Drosophila mojavensis Dmoj\Mal-A1 Drosophila grimshawi Dgri\Mal-A1
Stocks & Reagents
Stocks Listed in FlyBase ( 4 )
Bloomington	24850 w1118; Mi{ET1}Mal-A1MB05107
VDRC	v106220 P{KK105272}VIE-260B v15789 w1118; P{GD5459}v15789 v15790 w1118; P{GD5459}v15790/TM3
Genomic Clones ( 1 )
	BACR34O23 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 47 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE72980
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH16695 GH27641 HL03582 LP09544 RE16233 RE26576 RE51942 RE59173
Other clones	56557 72801 74883 214379.34 CK01.65A.F7 Dmel_dig_004276_0711_1259 Dmel_dig_006811_0692_2245 Dmel_dig_014651_0644_0825 Dmel_dig_018916_0619_0840 Dmel_neb_005605_0908_3325 Dmel_neb_008778_0697_0930 Dmel_neb_011699_0899_3014 Dmel_neb_013279_0127_1564 Dmel_neb_014417_0861_2831 Dmel_neb_014797_0633_0586 Dmel_neb_014807_0827_1977 Dmel_neb_014886_0113_1996 Dmel_neb_015214_0680_2789 Dmel_neb_015952_0436_3568 EC38653 EK053024 EK169217 EK201616 EK207139 EP09928 RP003042166 RP003114216 RP003158277 RP003170416 RP003202507 RP003268200 RP003322640 RP003331233 RP003470916 RP003530895 RP003569007 RP003581723 RP003652710
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0002570 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 35824
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: Mal-A1 LvpH (Gabrisko and Janecek, 2011)
Source for database merge of
Additional comments
Other Comments
	Identified during a molecular analysis of the larval cuticle proteins Lcp1, Lcp2, Lcp3 and Lcp4 at 44D. (Snyder et al., 1982) One of three genes that are clustered in an 8 kb segment of DNA and lie 11 kb from the second-chromosome Lcp gene cluster (Snyder and Davidson, 1983). The order of the genes is LvpH--1.7kb--LvpD--1.1kb--LvpL, with LvpH being closest to the Lcp cluster. LvpH and LvpL are transcribed off the same strand as Lcp1 and Lcp2 and LcpD off the same strand as Lcp3 and Lcp4. Three genes are completely sequenced and are 50-60% homologous in DNA sequence; they encode polypeptides of approximately 500 amino acids, which contain apparent signal peptide sequences but lack hydrophobic regions indicating that they are secreted rather than being membrane proteins; each has a sequence of 12 amino acids similar to known calcium binding domains of other proteins. The genes are coordinately transcribed in abundance in young larvae and adults, but not in late larvae when Lcp genes are transcribed; whereas Lcp genes are transcribed in the larval cuticle, Lvp transcripts are found in the larval viscera. The time and place of Lvp transcription suggests a possible digestive function of the gene products.
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_057279 RefSeq (Proteins) • NP_476627 DDBJ / EMBL / GenBank • AAF59089 AC005451 CAA23491 V00204 Entrez Gene - A searchable database of RefSeq genes. • 35824 UniProtKB/Swiss-Prot • P07190
Other Crossreferences
	EPD - Eukarytoic Promoter Database, an annotated collection of POL II promoters • 07033 07034 InterPro domains - A database of protein families, domains, and functional sites • Glycosyl hydrolase, family 13, catalytic domain (IPR006047) Glycosyl hydrolase, family 13, subfamily, catalytic domain (IPR006589) Glycoside hydrolase, catalytic domain (IPR013781) Glycoside hydrolase, superfamily (IPR017853) Glycoside hydrolase, family 13 (IPR015902)
Linkouts
	BioGRID - A database of protein and genetic interactions • 61676 DroID - A comprehensive database of gene and protein interactions. • FBgn0002570 DRSC - Results from RNAi screens. • FBgn0002570 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0002570 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG8696-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0002570 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 35824 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 35824 modMine - Data generated by the modENCODE project. • FBgn0002570
Synonyms & Secondary IDs ( 14 )
Reported As
Symbol Synonym	CG8696 (Fulton et al., 2001, Keleman et al., 2009.8.5) Drome_A1 (Gabriško and Janeček, 2011) H (Vieira et al., 1997, Henikoff and Wallace, 1988) LvpH (Gabrisko and Janecek, 2011, Geng and MacDonald, 2007, Japanese National Institute of Genetics, 2012.5.21) lvpH (Gabriško and Janeček, 2011) mal_A1 (Gabrisko and Janecek, 2011, Gabriško and Janeček, 2011) Mal-A1   V (Snyder et al., 1982)
Name Synonym	gene V (Snyder et al., 1982) hdl cuticle gene cluster (Snyder, 1993.3.25) Larval visceral protein H (Pedersen et al., 2010) maltase (Vieira et al., 1997) Maltase A1   maltase H precursor (Prager et al., 2007)
Secondary FlyBase IDs
References ( 34 )
Generate a list of	All references relating to this gene ( 34 )
List References by type	Research paper  ( 13 ) Supplementary material  ( 6 ) Personal communication to FlyBase  ( 7 ) FlyBase analysis  ( 2 ) DNA/RNA sequence record  ( 1 ) Stock list  ( 1 ) Protein sequence record  ( 1 ) Curated genome annotation  ( 2 ) Book  ( 1 )
Recent research papers ( 2 )
	Baycin-Hizal et al., 2011, J. Proteome Res. 10(6): 2777--2784 GlycoFly: A Database of Drosophila N-linked Glycoproteins Identified Using SPEG-MS Techniques. [FBrf0213834] Gabriško and Janeček, 2011, J. Mol. Evol. 72(1): 104--118 Characterization of maltase clusters in the genus Drosophila. [FBrf0212941] Show all research papers ...