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Gene Dmel\RpS3

General Information
Symbol	Dmel\RpS3	Species	D. melanogaster
Name	Ribosomal protein S3	Annotation symbol	CG6779
Feature type	protein_coding_gene	FlyBase ID	FBgn0002622
Gene Model Status	Current	Stock availability	14 publicly available
Also Known As	M(3)w, M(3)95A, S3, dS3, M(3R)w
Genomic Location
Chromosome (arm)	3R	Recombination map	3-79.7
Cytogenetic map	94E13-94E13	Sequence location	3R:19,184,535..19,185,700 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Ribosomal protein S3 is referred to in FlyBase by the symbol Dmel\RpS3 (CG6779, FBgn0002622). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: oxidized purine base lesion DNA N-glycosylase activity; DNA-(apurinic or apyrimidinic site) lyase activity. There is experimental evidence that it is involved in the biological process: negative regulation of neuron apoptosis; response to DNA damage stimulus; DNA repair; mitosis. 14 alleles are reported. The phenotypes of these alleles are annotated with: organ system; multicellular structure; organ system subdivision; imaginal precursor; sensillum; anatomical structure; germarium; thoracic segment; dorsal thoracic disc; external compound sense organ; female germline cyst; adult segment. It has one annotated transcript and one annotated polypeptide. Protein features are: K Homology; K Homology, prokaryotic type; K Homology, type 2; K homology domain-like, alpha/beta; Ribosomal protein S3, C-terminal; Ribosomal protein S3, conserved site; Ribosomal protein S3, eukaryotic/archaeal. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of very high expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, during early pupal stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: High levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1632269_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of RpS3. Gene sequence location is 3R:19184535..19185700.
Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage	M(3)95A Strong Minute; eclosion delayed 40 hours (Ferrus, 1975, Genetics 79: 589-99).
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2012_01	References Casad et al., 2011, Genetics 189(3): 861--870 Hasegawa et al., 2011, Development 138(5): 983--993 Sequence features BKN29080 HFA16838
FB2011_10	References Alonso and Santaren, 2006, J. Proteome Res. 5(8): 2025--2032
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 94E13-94E13   Limits computationally determined from genome sequence between P{PZ}cnc03921 and P{PZ}l(3)0690606906
Experimentally Determined Cytological Location
Cytogenetic map Notes References 94F-95A   (determined by in situ hybridisation)   (Wilson et al., 1994) 94F-95A   (determined by in situ hybridisation)   (Andersson et al., 1994) 95A-95A   (determined by in situ hybridisation)   (Wilson et al., 1993)
Experimentally Determined Recombination Data
Location	3-73 (Andersson et al., 1994) 3-79.7   3-79.8 (Schultz, 1929) 3- (Lambertsson, 1993.3.29)
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\RpS3 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) RpS3-RA FBtr0084410  NM_057284   903   246
Additional Transcript Data & Comments
Reported size (kB)	0.856 (longest cDNA) (Wilson et al., 1993) 0.94, 0.9 (northern blot) (Andersson et al., 1994)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein RpS3-PA   FBpp0083802   27.5   246   9.90     NP_476632   AAF56129
Additional Polypeptide Data & Comments
Reported size (kDa)	246 (aa); 27 (kD) (Wilson et al., 1993) 246 (aa); 27.5 (kD predicted) (Andersson et al., 1994)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Ribosomal protein S3, conserved site (IPR018280) Ribosomal protein S3, C-terminal (IPR001351) K Homology, type 2 (IPR004044) Ribosomal protein S3, eukaryotic/archaeal (IPR005703) K Homology, prokaryotic type (IPR009019) K Homology (IPR004087) K homology domain-like, alpha/beta (IPR015946)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA264799   AA264874   AA264935   AA390625   AA390929   AA391169   AA391278   AA393004   AA439074   AA439999   AA440845   AA441207   AA539612   AA567057   AA694867   AA694973   AA695347   AA695581   AA695621   AA695792   AA696454   AA696495   AA696616   AA696746   AA698514   AA735287   AA735661   AA735755   AA801935   AA802281   AA802323   AA803104   AA803241   AA804048   AA804075   AA817032   AA817150   AA820250   AA821014   AA941002   AA941812   AA942086   AA949639   AA949658   AA950802   AA951009   AA951123   AA951256   AA951280   AA951939   AE014297 AAF56129   AC010670   AI061990   AI062469   AI063311   AI063535   AI063766   AI064154   AI106764   AI106894   AI107157   AI107390   AI107498   AI109923   AI134834   AI135421   AI135704   AI239023   AI256883   AI257611   AI257641   AI258159   AI258856   AI258989   AI259983   AI260853   AI261083   AI292614   AI293377   AI293773   AI295641   AI295684   AI296003   AI296772   AI387652   AI387788   AI388042   AI388395   AI388720   AI388912   AI389326   AI402624   AI403515   AI403856   AI404176   AI404855   AI405593   AI512545   AI513163   AI513331   AI514111   AI514313   AI515599   AI515646   AI519405   AI519407   AI531032   AI531657   AI532319   AI532666   AI532823   AI532905   AI533295   AI533296   AI533587   AI534125   AI534406   AI534951   AI535012   AI542013   AI542149   AI543356   AY118971 AAM50831   AY231642   AY231995   AY440819   BF505917   BG632983   BG634914   BG635467   BG635500   BG635749   BG635756   BG635835   BG635892   BG635907   BG636002   BG636284   BG636355   BG636401   BG636471   BG636923   BG636932   BG636990   BG637268   BG637281   BG637498   BG640120   BG640159   BG640325   BG641355   BI141754   BI141861   BI142025   BI142086   BI161485   BI161486   BI161789   BI161790   BI162481   BI162482   BI163353   BI164246   BI164696   BI165019   BI165788   BI166030   BI166965   BI167149   BI167680   BI168118   BI168754   BI169563   BI169741   BI169974   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BX070506   BX070555   BX070615   BX070633   BX070755   BX070869   BX071112   BX071304   BX071404   BX071485   BX071616   BX071696   BX071741   BX071776   BX071837   BX071950   BX072062   CA804810   CK135659   CK135817   CK604828   CK604829   CK605240   CK605241   CK605357   CK605358   CK658399   CK658604   CK659115   CK659558   CK659840   CK660485   CK660793   CK661498   CK662459   CK662468   CO152665   CO153406   CO153500   CO153761   CO154289   CO154937   CO154968   CO155211   CO155357   CO155496   CO155903   CO156083   CO156861   CO156970   CO157085   CO177547   CO182564   CO182995   CO185409   CO191476   CO191914   CO193315   CO193458   CO195016   CO195964   CO270936   CO273612   CO285433   CO294781   CO304191   CO320806   CO323623   CO329336   CO335395   CO335555   CO336132   CO336533   CO336571   CO336624   CO337127   CO337320   CO337549   CO337684   CO338749   CR938011   CR938327   CR938573   EC059500   EC063729   EC065155   EC065331   EC066372   EC073917   EC074597   EC194466   EC199543   EC204821   EC207178   EC217417   EC218711   EC230068   EC233078   EC235101   EC249835   EC261038   EC261070   EC261181   EC261464   EC261797   EC262189   EC262930   EC263272   EC263365   EC263697   EC264157   EC264321   EC264627   EC264926   EC264940   EC265157   EC265470   EC266045   EC266247   EC266263   EC266524   EC266621   EC267009   EC267691   EL872442   EL876103   EL876374   EL876375   EL886587   EV574806   EV575905   EV576049   EV576744   EV578263   EV578739   EV579629   EV580088   EV581592   EV581746   EV582519   EV583237   EV583500   EV583696   EV585012   EV587608   EV590301   EV591091   EV592613   EV594424   EV594980   EV596367   EV597659   EV598356   EV599078   EV599728   EV600079   EV600337   GH748238   GH748947   GH749766   GH750185   GH750550   GH750749   GH752608   GH753122   GH753407   GH753520   GH753974   GH754067   GH754280   GH754416   GH754764   GH754993   GH755048   GH755575   GH755771   GH756180   GH756281   GH757166   GH757207   GH757435   GH757642   GH757645   GH758039   GH758617   GH758978   GH759218   GH759307   GH759784   GH760051   GH760906   GH761127   GH761256   GH771016   GH772272   GH773127   GH773136   GH773389   GH773782   GH773785   GH773823   GH775400   GH775562   GH775707   GH775835   GH776186   GH776580   GH776590   GH776794   GH777238   GH777316   GH777752   GH778619   GH778736   GH779021   GH780018   GH780380   GH780396   GH780477   GH781322   GH781488   GH781630   GH781660   GH781920   GH782082   GH782384   GH782415   GH782771   GH783831   GH783861   GH784650   GH785206   GH785525   GH786135   GH786159   GH786221   GH786418   GH786528   GH786761   GH787302   GH787949   GH788861   GH789094   GH789861   GH790579   GH790720   GH790786   GH791515   GH791570   GH791974   GH792022   GH793664   GH793721   GH793848   GH794216   GH794519   GH794607   GH794676   GH795907   GH796086   GH796144   GH796294   GH796395   GH796444   GH797077   GH797700   GH798013   GH798280   GH798328   GH799146   GH799842   GH800648   GH800772   GH801387   GH801776   GH802051   GH802437   GH802799   GH802878   GH803137   GH803356   GH804182   GH804539   GH804562   GH805092   GH805167   GH805500   GH805630   GH805860   GH805933   GH805961   GH806330   GH806932   GH806981   GH807375   GH807934   GH808138   GH808524   GH808568   GH808917   GH809218   GH809581   GH809790   GH810757   GH810932   GH811251   GH811280   GH811476   GH812215   GH812510   GH813213   GH813385   GH813411   GH813439   GH814886   GH815235   GH815701   GH816395   GH816464   GH817581   GH817812   GH818325   GH818527   GH818753   GH819056   GH819513   GH820052   GH820151   GH820191   GH820293   GH820429   GH820779   GH820899   GH821722   GH822501   GH822617   GH822849   GH822940   GH822977   GH823741   GH824032   GH824583   GH824593   GH824734   GH825548   GH826003   GH826562   GH826563   GH826898   GH826955   GH827039   GH827142   GH827711   GH827972   GH828590   GH828859   GH829291   GH829334   GH829548   GH830384   GH830567   GH831919   GH832409   GH832800   GH833028   GH834257   GH834586   GH834928   GH835303   GH835530   GH835900   GH835935   GH835985   GH836019   GH836798   GH837065   GH837071   GH837085   GH837372   GH837430   GH838417   GH839030   GH839094   GH839400   GH839831   GH840927   GH841466   GH841746   GH842005   GH842757   GH842990   GH843008   GH843124   GH843548   GH843869   GH844119   GH844250   GH844539   GH844546   GH844729   GH844885   GH845580   GH845948   GH845955   GH845992   GH846141   GH846321   GH846719   GH847072   GH847275   GH847472   GH847536   GH847762   GH848524   GH848574   GH848591   GH849293   GH849430   GH850073   GH850486   GH850611   GH850684   GH851141   GH851155   GH851330   GH851830   GH852186   GH852893   GH852919   GH852980   GH853648   GH853740   GH853845   GH855100   GH855393   GH855830   GH856944   GH858938   GH859013   GH859395   GH859435   GH859520   GH860338   GH860881   GH861691   GH861901   GH862116   GH862365   GH863368   GH863402   GH863453   GH863701   GH863817   GH863875   GH864072   GH864104   GH864378   GH864928   GH865202   GH865430   GH865711   GH865860   GH866429   GH867710   GH868213   GH868666   GH869083   GH869323   GH870229   GH870283   GH870445   GH870872   GH871059   GH872058   GH872498   GH872890   GH873395   GH873590   GH874913   GH875138   GH875181   GH875461   GH875908   GH876396   GH876587   GH878492   GH878622   GH879099   GH879117   GH879510   GH879654   GH879676   GH879897   GH880415   GH880690   GH880984   GH881747   GH882064   GH882078   GH882454   GH882527   GH882728   GH882795   GH883066   GH883377   GH884006   GH884107   GH885643   GH885884   GH887681   GH887800   GH888233   GH888732   GH888817   GH889122   GH889347   GH889473   GH889633   GH889713   GH889899   GH890442   GH890772   GH890827   GH890870   GH891035   GH891054   GH891682   GH891693   GH891815   GH892036   GH892108   GH892956   GH893114   GH893506   GH893525   GH893526   GH893833   GH894999   GH895432   GH895490   GH895870   GH895924   GH896114   GH896230   GH896640   GH896840   GH897241   GH897489   GH898203   GH899540   GH899560   GH899669   GH899841   GH900668   GH902284   GH902544   GH902815   GH903167   GH903707   GH904182   GH904546   GH904800   GH904853   GH905314   GH905555   GH905762   GH905914   GH906526   GH906781   GH906785   GH907602   GH907766   GH907943   GH908414   GH908459   GH908704   GH909021   GH909144   GH911180   GH911376   GH911523   GH911601   GH911709   GH911972   GH912035   GH912177   GH912888   GH912977   GH913719   GH914432   GH914858   GH915317   GH915334   GH916045   GH916366   GH916436   GH916443   GH916828   GH916939   GH917456   GH917714   GH917854   GH918367   GH918612   GH919008   GH919183   GH919194   GH919564   GH919594   GH919960   GH920442   GH920817   GH922585   GH922622   GH922627   GH922799   GH922962   GH923282   GH923283   GH923743   GH923905   GH923975   GH924196   GH924252   GH924349   GH924753   GH925836   GH925886   GH927280   GH928995   GH929357   GH929863   GH930535   GH931179   GH932072   GH932318   GH932949   GH933832   GH934206   GH934327   GH934541   GH934761   GH934903   GH934945   GH935086   GH935103   GH935236   GH935389   GH935491   GH935685   GH935760   GH935799   GH936013   GH936775   GH936877   GH937225   GH937304   GH937773   GH938315   GH938389   GH939246   GH942371   L13690 AAA28875   X72921 CAA51425
UniProtKB/Swiss-Prot	Q06559
UniProtKB/TrEMBL
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
mass spectroscopy Stage Tissue/Position (including subcellular localization) Reference day 7 of adulthood -- day 49 of adulthood   adult heart   (Cammarato et al., 2011)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0002622    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0002622 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of very high expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, during early pupal stages, in adult female stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0002622 expression level Developmental Stage   Expression Level embryo 00-02hr    144093 embryo 02-04hr    211148 embryo 04-06hr    201268 embryo 06-08hr    211942 embryo 08-10hr    229637 embryo 10-12hr    269095 embryo 12-14hr    146420 embryo 14-16hr    223194 embryo 16-18hr    183829 embryo 18-20hr    204966 embryo 20-22hr    191714 embryo 22-24hr    166644 larva L1    240500 larva L2    191834 larva L3 12hr old    160029 larva L3 puffstage 1-2    113521 larva L3 puffstage 3-6    113324 larva L3 puffstage 7-9    112176 white prepupae new    103615 white prepupae 12hr    104178 white prepupae 24hr    118186 pupae 2d postWPP    89998 pupae 3d postWPP    71940 pupae 4d postWPP    95093 adult male 01day    68054 adult male 05day    72429 adult male 30day    79582 adult female 01day    172453 adult female 05day    140546 adult female 30day    153629 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (144093) embryo 02-04hr  (211148) embryo 04-06hr  (201268) embryo 06-08hr  (211942) embryo 08-10hr  (229637) embryo 10-12hr  (269095) embryo 12-14hr  (146420) embryo 14-16hr  (223194) embryo 16-18hr  (183829) embryo 18-20hr  (204966) embryo 20-22hr  (191714) embryo 22-24hr  (166644) larva L1  (240500) larva L2  (191834) larva L3 12hr old  (160029) larva L3 puffstage 1-2  (113521) larva L3 puffstage 3-6  (113324) larva L3 puffstage 7-9  (112176) white prepupae new  (103615) white prepupae 12hr  (104178) white prepupae 24hr  (118186) pupae 2d postWPP  (89998) pupae 3d postWPP  (71940) pupae 4d postWPP  (95093) adult male 01day  (68054) adult male 05day  (72429) adult male 30day  (79582) adult female 01day  (172453) adult female 05day  (140546) adult female 30day  (153629) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (144093) embryo 02-04hr  (211148) embryo 04-06hr  (201268) embryo 06-08hr  (211942) embryo 08-10hr  (229637) embryo 10-12hr  (269095) embryo 12-14hr  (146420) embryo 14-16hr  (223194) embryo 16-18hr  (183829) embryo 18-20hr  (204966) embryo 20-22hr  (191714) embryo 22-24hr  (166644) larva L1  (240500) larva L2  (191834) larva L3 12hr old  (160029) larva L3 puffstage 1-2  (113521) larva L3 puffstage 3-6  (113324) larva L3 puffstage 7-9  (112176) white prepupae new  (103615) white prepupae 12hr  (104178) white prepupae 24hr  (118186) pupae 2d postWPP  (89998) pupae 3d postWPP  (71940) pupae 4d postWPP  (95093) adult male 01day  (68054) adult male 05day  (72429) adult male 30day  (79582) adult female 01day  (172453) adult female 05day  (140546) adult female 30day  (153629) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr  (144093) embryo 02-04hr  (211148) embryo 04-06hr  (201268) embryo 06-08hr  (211942) embryo 08-10hr  (229637) embryo 10-12hr  (269095) embryo 12-14hr  (146420) embryo 14-16hr  (223194) embryo 16-18hr  (183829) embryo 18-20hr  (204966) embryo 20-22hr  (191714) embryo 22-24hr  (166644) larva L1  (240500) larva L2  (191834) larva L3 12hr old  (160029) larva L3 puffstage 1-2  (113521) larva L3 puffstage 3-6  (113324) larva L3 puffstage 7-9  (112176) white prepupae new  (103615) white prepupae 12hr  (104178) white prepupae 24hr  (118186) pupae 2d postWPP  (89998) pupae 3d postWPP  (71940) pupae 4d postWPP  (95093) adult male 01day  (68054) adult male 05day  (72429) adult male 30day  (79582) adult female 01day  (172453) adult female 05day  (140546) adult female 30day  (153629) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    144093 embryo 02-04hr    211148 embryo 04-06hr    201268 embryo 06-08hr    211942 embryo 08-10hr    229637 embryo 10-12hr    269095 embryo 12-14hr    146420 embryo 14-16hr    223194 embryo 16-18hr    183829 embryo 18-20hr    204966 embryo 20-22hr    191714 embryo 22-24hr    166644 larva L1    240500 larva L2    191834 larva L3 12hr old    160029 larva L3 puffstage 1-2    113521 larva L3 puffstage 3-6    113324 larva L3 puffstage 7-9    112176 white prepupae new    103615 white prepupae 12hr    104178 white prepupae 24hr    118186 pupae 2d postWPP    89998 pupae 3d postWPP    71940 pupae 4d postWPP    95093 adult male 01day    68054 adult male 05day    72429 adult male 30day    79582 adult female 01day    172453 adult female 05day    140546 adult female 30day    153629 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0002622 expression level Developmental Stage   Expression Level embryo 00-02hr    144093 embryo 02-04hr    211148 embryo 04-06hr    201268 embryo 06-08hr    211942 embryo 08-10hr    229637 embryo 10-12hr    269095 embryo 12-14hr    146420 embryo 14-16hr    223194 embryo 16-18hr    183829 embryo 18-20hr    204966 embryo 20-22hr    191714 embryo 22-24hr    166644 larva L1    240500 larva L2    191834 larva L3 12hr old    160029 larva L3 puffstage 1-2    113521 larva L3 puffstage 3-6    113324 larva L3 puffstage 7-9    112176 white prepupae new    103615 white prepupae 12hr    104178 white prepupae 24hr    118186 pupae 2d postWPP    89998 pupae 3d postWPP    71940 pupae 4d postWPP    95093 adult male 01day    68054 adult male 05day    72429 adult male 30day    79582 adult female 01day    172453 adult female 05day    140546 adult female 30day    153629 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (144093) embryo 02-04hr  (211148) embryo 04-06hr  (201268) embryo 06-08hr  (211942) embryo 08-10hr  (229637) embryo 10-12hr  (269095) embryo 12-14hr  (146420) embryo 14-16hr  (223194) embryo 16-18hr  (183829) embryo 18-20hr  (204966) embryo 20-22hr  (191714) embryo 22-24hr  (166644) larva L1  (240500) larva L2  (191834) larva L3 12hr old  (160029) larva L3 puffstage 1-2  (113521) larva L3 puffstage 3-6  (113324) larva L3 puffstage 7-9  (112176) white prepupae new  (103615) white prepupae 12hr  (104178) white prepupae 24hr  (118186) pupae 2d postWPP  (89998) pupae 3d postWPP  (71940) pupae 4d postWPP  (95093) adult male 01day  (68054) adult male 05day  (72429) adult male 30day  (79582) adult female 01day  (172453) adult female 05day  (140546) adult female 30day  (153629) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (144093) embryo 02-04hr  (211148) embryo 04-06hr  (201268) embryo 06-08hr  (211942) embryo 08-10hr  (229637) embryo 10-12hr  (269095) embryo 12-14hr  (146420) embryo 14-16hr  (223194) embryo 16-18hr  (183829) embryo 18-20hr  (204966) embryo 20-22hr  (191714) embryo 22-24hr  (166644) larva L1  (240500) larva L2  (191834) larva L3 12hr old  (160029) larva L3 puffstage 1-2  (113521) larva L3 puffstage 3-6  (113324) larva L3 puffstage 7-9  (112176) white prepupae new  (103615) white prepupae 12hr  (104178) white prepupae 24hr  (118186) pupae 2d postWPP  (89998) pupae 3d postWPP  (71940) pupae 4d postWPP  (95093) adult male 01day  (68054) adult male 05day  (72429) adult male 30day  (79582) adult female 01day  (172453) adult female 05day  (140546) adult female 30day  (153629) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr  (144093) embryo 02-04hr  (211148) embryo 04-06hr  (201268) embryo 06-08hr  (211942) embryo 08-10hr  (229637) embryo 10-12hr  (269095) embryo 12-14hr  (146420) embryo 14-16hr  (223194) embryo 16-18hr  (183829) embryo 18-20hr  (204966) embryo 20-22hr  (191714) embryo 22-24hr  (166644) larva L1  (240500) larva L2  (191834) larva L3 12hr old  (160029) larva L3 puffstage 1-2  (113521) larva L3 puffstage 3-6  (113324) larva L3 puffstage 7-9  (112176) white prepupae new  (103615) white prepupae 12hr  (104178) white prepupae 24hr  (118186) pupae 2d postWPP  (89998) pupae 3d postWPP  (71940) pupae 4d postWPP  (95093) adult male 01day  (68054) adult male 05day  (72429) adult male 30day  (79582) adult female 01day  (172453) adult female 05day  (140546) adult female 30day  (153629) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    144093 embryo 02-04hr    211148 embryo 04-06hr    201268 embryo 06-08hr    211942 embryo 08-10hr    229637 embryo 10-12hr    269095 embryo 12-14hr    146420 embryo 14-16hr    223194 embryo 16-18hr    183829 embryo 18-20hr    204966 embryo 20-22hr    191714 embryo 22-24hr    166644 larva L1    240500 larva L2    191834 larva L3 12hr old    160029 larva L3 puffstage 1-2    113521 larva L3 puffstage 3-6    113324 larva L3 puffstage 7-9    112176 white prepupae new    103615 white prepupae 12hr    104178 white prepupae 24hr    118186 pupae 2d postWPP    89998 pupae 3d postWPP    71940 pupae 4d postWPP    95093 adult male 01day    68054 adult male 05day    72429 adult male 30day    79582 adult female 01day    172453 adult female 05day    140546 adult female 30day    153629 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0002622    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0002622 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0002622 expression level Tissue   Expression Level Larval Central Nervous System    2603.3 Larval Midgut    4373.2 Larval Hindgut    4203.9 Larval Malpighian Tubules    4934.5 Larval Fat Body    7686.2 Larval Salivary Gland    7284.3 Larval Trachea    5937.675 Larval Carcass    4340.5 Adult Head    4531.1 Adult Eye    6342.575 Adult Brain    2960.1 Adult Thoracic-Abdominal Ganglion    4108.6 Adult Crop    6041.4 Adult Midgut    5101.6 Adult Hindgut    5112 Adult Malpighian Tubules    5126.4 Adult Fat Body    5215 Adult Salivary Gland    10420.8 Adult Heart    6552.9 Adult VirginFemale Spermatheca    5559.3 Adult InseminatedFemale Spermatheca    5621.9 Adult Ovary    3341.7 Adult Testis    1222.7 Adult Male Accessory Gland    9099.8 Adult Carcass    5721.3 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  (2603.3) Larval Midgut  (4373.2) Larval Hindgut  (4203.9) Larval Malpighian Tubules  (4934.5) Larval Fat Body  (7686.2) Larval Salivary Gland  (7284.3) Larval Trachea  (5937.675) Larval Carcass  (4340.5) Adult Head  (4531.1) Adult Eye  (6342.575) Adult Brain  (2960.1) Adult Thoracic-Abdominal Ganglion  (4108.6) Adult Crop  (6041.4) Adult Midgut  (5101.6) Adult Hindgut  (5112) Adult Malpighian Tubules  (5126.4) Adult Fat Body  (5215) Adult Salivary Gland  (10420.8) Adult Heart  (6552.9) Adult VirginFemale Spermatheca  (5559.3) Adult InseminatedFemale Spermatheca  (5621.9) Adult Ovary  (3341.7) Adult Testis  (1222.7) Adult Male Accessory Gland  (9099.8) Adult Carcass  (5721.3) Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System  (2603.3) Larval Midgut  (4373.2) Larval Hindgut  (4203.9) Larval Malpighian Tubules  (4934.5) Larval Fat Body  (7686.2) Larval Salivary Gland  (7284.3) Larval Trachea  (5937.675) Larval Carcass  (4340.5) Adult Head  (4531.1) Adult Eye  (6342.575) Adult Brain  (2960.1) Adult Thoracic-Abdominal Ganglion  (4108.6) Adult Crop  (6041.4) Adult Midgut  (5101.6) Adult Hindgut  (5112) Adult Malpighian Tubules  (5126.4) Adult Fat Body  (5215) Adult Salivary Gland  (10420.8) Adult Heart  (6552.9) Adult VirginFemale Spermatheca  (5559.3) Adult InseminatedFemale Spermatheca  (5621.9) Adult Ovary  (3341.7) Adult Testis  (1222.7) Adult Male Accessory Gland  (9099.8) Adult Carcass  (5721.3) Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    2603.3 Larval Midgut    4373.2 Larval Hindgut    4203.9 Larval Malpighian Tubules    4934.5 Larval Fat Body    7686.2 Larval Salivary Gland    7284.3 Larval Trachea    5937.675 Larval Carcass    4340.5 Adult Head    4531.1 Adult Eye    6342.575 Adult Brain    2960.1 Adult Thoracic-Abdominal Ganglion    4108.6 Adult Crop    6041.4 Adult Midgut    5101.6 Adult Hindgut    5112 Adult Malpighian Tubules    5126.4 Adult Fat Body    5215 Adult Salivary Gland    10420.8 Adult Heart    6552.9 Adult VirginFemale Spermatheca    5559.3 Adult InseminatedFemale Spermatheca    5621.9 Adult Ovary    3341.7 Adult Testis    1222.7 Adult Male Accessory Gland    9099.8 Adult Carcass    5721.3 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0002622 expression level Tissue   Expression Level Larval Central Nervous System    2603.3 Larval Midgut    4373.2 Larval Hindgut    4203.9 Larval Malpighian Tubules    4934.5 Larval Fat Body    7686.2 Larval Salivary Gland    7284.3 Larval Trachea    5937.675 Larval Carcass    4340.5 Adult Head    4531.1 Adult Eye    6342.575 Adult Brain    2960.1 Adult Thoracic-Abdominal Ganglion    4108.6 Adult Crop    6041.4 Adult Midgut    5101.6 Adult Hindgut    5112 Adult Malpighian Tubules    5126.4 Adult Fat Body    5215 Adult Salivary Gland    10420.8 Adult Heart    6552.9 Adult VirginFemale Spermatheca    5559.3 Adult InseminatedFemale Spermatheca    5621.9 Adult Ovary    3341.7 Adult Testis    1222.7 Adult Male Accessory Gland    9099.8 Adult Carcass    5721.3 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  (2603.3) Larval Midgut  (4373.2) Larval Hindgut  (4203.9) Larval Malpighian Tubules  (4934.5) Larval Fat Body  (7686.2) Larval Salivary Gland  (7284.3) Larval Trachea  (5937.675) Larval Carcass  (4340.5) Adult Head  (4531.1) Adult Eye  (6342.575) Adult Brain  (2960.1) Adult Thoracic-Abdominal Ganglion  (4108.6) Adult Crop  (6041.4) Adult Midgut  (5101.6) Adult Hindgut  (5112) Adult Malpighian Tubules  (5126.4) Adult Fat Body  (5215) Adult Salivary Gland  (10420.8) Adult Heart  (6552.9) Adult VirginFemale Spermatheca  (5559.3) Adult InseminatedFemale Spermatheca  (5621.9) Adult Ovary  (3341.7) Adult Testis  (1222.7) Adult Male Accessory Gland  (9099.8) Adult Carcass  (5721.3) Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System  (2603.3) Larval Midgut  (4373.2) Larval Hindgut  (4203.9) Larval Malpighian Tubules  (4934.5) Larval Fat Body  (7686.2) Larval Salivary Gland  (7284.3) Larval Trachea  (5937.675) Larval Carcass  (4340.5) Adult Head  (4531.1) Adult Eye  (6342.575) Adult Brain  (2960.1) Adult Thoracic-Abdominal Ganglion  (4108.6) Adult Crop  (6041.4) Adult Midgut  (5101.6) Adult Hindgut  (5112) Adult Malpighian Tubules  (5126.4) Adult Fat Body  (5215) Adult Salivary Gland  (10420.8) Adult Heart  (6552.9) Adult VirginFemale Spermatheca  (5559.3) Adult InseminatedFemale Spermatheca  (5621.9) Adult Ovary  (3341.7) Adult Testis  1222.7 Adult Male Accessory Gland  (9099.8) Adult Carcass  (5721.3) Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    2603.3 Larval Midgut    4373.2 Larval Hindgut    4203.9 Larval Malpighian Tubules    4934.5 Larval Fat Body    7686.2 Larval Salivary Gland    7284.3 Larval Trachea    5937.675 Larval Carcass    4340.5 Adult Head    4531.1 Adult Eye    6342.575 Adult Brain    2960.1 Adult Thoracic-Abdominal Ganglion    4108.6 Adult Crop    6041.4 Adult Midgut    5101.6 Adult Hindgut    5112 Adult Malpighian Tubules    5126.4 Adult Fat Body    5215 Adult Salivary Gland    10420.8 Adult Heart    6552.9 Adult VirginFemale Spermatheca    5559.3 Adult InseminatedFemale Spermatheca    5621.9 Adult Ovary    3341.7 Adult Testis    1222.7 Adult Male Accessory Gland    9099.8 Adult Carcass    5721.3 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    4531.1   NA  Eye    6342.575   NA  Brain    2960.1   2603.3  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    4108.6   NA  Crop    6041.4   4373.2  Midgut    5101.6   4203.9  Hindgut    5112   4934.5  Malpighian Tubules    5126.4   7686.2  Fat Body    5215   7284.3  Salivary Gland    10420.8   NA  Heart    6552.9   5937.675  Trachea    NA   NA  VirginFemale Spermatheca    5559.3   NA  InseminatedFemale Spermatheca    5621.9   NA  Ovary    3341.7   NA  Testis    1222.7   NA  Male Accessory Gland    9099.8   4340.5  Carcass    5721.3 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_22
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0002622 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6779-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for RpS3 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 7-8 Stages(s) 9-10 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele cell lethal | recessive RpS3unspecified lethal, with Scer\GAL4pnr-MD237 RpS3GD4577 lethal | pupal stage, with Scer\GAL4pnr-MD237 RpS3GD4577 lethal | recessive RpS3Plac92 viable RpS33 RpS35 RpS3prv9 RpS3prv11 Sterility Allele female fertile | reduced RpS3Plac92 RpS3prv11 female sterile RpS3prv9 fertile RpS33 RpS35 male sterile RpS3prv9 Other Phenotypes Allele developmental rate defective RpS34 RpS35 developmental rate defective | dominant RpS31 RpS32 developmental rate defective | dominant | larval stage RpS31 Minute RpS33 RpS34 RpS35 Minute | dominant RpS31 RpS32 small body RpS34 visible RpS3prv11 visible | dominant RpS31 RpS32 RpS3Plac92 RpS3prv9 RpS3unspecified Phenotype manifest in Allele egg chamber RpS3prv9 eye RpS31 RpS3unspecified eye-antennal disc RpS3prv9 germarium RpS3prv9 macrochaeta RpS31 RpS32 RpS34 RpS35 RpS3unspecified male genitalia RpS3prv9 ovariole RpS3prv9 primary spermatocyte cyst RpS3prv9 scutellar bristle RpS3Plac92 RpS3prv11 RpS3prv9 testis RpS3prv9 wing disc RpS3prv9
Classical Alleles ( 10 )
For All Classical Alleles Show
Allele of RpS3 Class Mutagen Stocks Known lesion RpS32 3 -- RpS31 2 -- RpS3Plac92 hypomorphic allele - genetic evidence Delta2-3 P-element activity 2 Yes RpS33 1 -- RpS34 1 -- RpS35 0 -- RpS3Plac92rv4 Delta2-3 0 -- RpS3prv11 Delta2-3 0 Yes RpS3prv9 Delta2-3 0 Yes RpS3unspecified 0 --
Alleles Carried on Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show
Allele of RpS3 Class Mutagen Stocks Known lesion RpS3GD4577 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes RpS3GL00332 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes RpS3JF01410 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes RpS3KK109080 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Duplicated in	Dp(3;3)M95A+1 (Broderick and Roberts, 1982) Dp(3;3)M95A+1a (Vassin et al., 1985) Dp(3;3)M95A+4a (Vassin et al., 1985) Dp(3;3)M95A+9 (Broderick and Roberts, 1982) Dp(3;3)M95A+10 (Broderick and Roberts, 1982) Dp(3;3)M95A+13a (Vassin et al., 1985) Dp(3;3)M95A+16 (Vassin et al., 1985) Dp(3;3)M95A+30a (Vassin et al., 1985) Dp(3;3)M95A+33a (Vassin et al., 1985)
Disrupted in	Df(3R)M95A (Reuter et al., 1986)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD4577} NA P{KK109080} NA P{TRiP.GL00332} NA P{TRiP.JF01410} NA
Insertions
	Type of insertions Name Expression data insertion of enhancer trap P{A92}RpS3Plac92 No miscellaneous insertions P{A92-Δprv9}RpS3prv9 NA P{A92-Δprv11}RpS3prv11 NA
Gene Ontology: Function, Process & Cellular Component ( 16 unique terms )
Terms Based on Experimental Evidence ( 11 terms )
Molecular Function
CV term Evidence References
DNA-(apurinic or apyrimidinic site) lyase activity inferred from direct assay (Wilson et al., 1994, Yacoub et al., 1996) oxidized purine base lesion DNA N-glycosylase activity inferred from direct assay (Yacoub et al., 1996)
Biological Process
CV term Evidence References
DNA repair inferred from genetic interaction with EchoBASE:EB0325 AND inferred from genetic interaction with EchoBASE:EB1066, EchoBASE:EB0645 (Yacoub et al., 1996) mitosis inferred from mutant phenotype (Ducat et al., 2008) negative regulation of neuron apoptosis inferred from mutant phenotype (Coelho et al., 2005) response to DNA damage stimulus inferred from mutant phenotype (Ravi et al., 2009)
Cellular Component
CV term Evidence References
lipid particle inferred from direct assay (Cermelli et al., 2006) microtubule associated complex inferred from direct assay (Hughes et al., 2008) nuclear matrix inferred from direct assay (Wilson et al., 1994) nucleus inferred from direct assay (Wilson et al., 1994) ribosome inferred from direct assay (Alonso and Santaren, 2006)
Terms Based on Predictions or Assertions ( 9 terms )
Molecular Function
CV term Evidence References
DNA-(apurinic or apyrimidinic site) lyase activity non-traceable author statement (Wilson, 1993) RNA binding inferred from electronic annotation with InterPro:IPR004044, InterPro:IPR004087, InterPro:IPR009019, InterPro:IPR018280 (FlyBase Curators et al., 2004-) structural constituent of ribosome inferred from sequence or structural similarity with UniProtKB:P17073 (FlyBase, 1992-) non-traceable author statement (Wilson, 1993, Swiss-Prot Project Members, 1994.6.1)
Biological Process
CV term Evidence References
DNA repair non-traceable author statement (Swiss-Prot Project Members, 1994.6.1) translation inferred from sequence or structural similarity with UniProtKB:P17073 (FlyBase, 1992-) non-traceable author statement (Wilson, 1993)
Cellular Component
CV term Evidence References
cytoplasm non-traceable author statement (Swiss-Prot Project Members, 1994.6.1) cytosolic small ribosomal subunit inferred from sequence or structural similarity with UniProtKB:P17073 (FlyBase, 1992-) non-traceable author statement (Wilson, 1993) nucleus non-traceable author statement (Swiss-Prot Project Members, 1994.6.1) ribosome non-traceable author statement (Swiss-Prot Project Members, 1994.6.1)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions RpS3 allele Gene References RpS31 Dl (Schultz, 1929) J (Schultz, 1929) piwi (Smulders-Srinivasan and Lin, 2003) RpS32 Dl (Dietrich and Campos-Ortega, 1984) unspecified Pi3K92E (Coelho et al., 2005) pix (Coelho et al., 2005)
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 67703 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0002622 DroID - A comprehensive database of gene and protein interactions. • FBgn0002622 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42761
Orthologs
Genome-wide drosophilid orthologs	Dana\GF16244 Dere\GG11202 Dgri\GH20000 Dmoj\GI22047 Dper\GL13632 Dpse\GA19858 Dsec\GM26502 Dsim\GD21014 Dvir\RpS3 Dwil\GK14111 Dyak\RpS3
Curated drosophilid orthologs	Dpse\GA19858   Dsim\RpS3 (Swanson et al., 2001) Dvir\RpS3   Dyak\RpS3
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL008192-PB Aedes aegypti (mosquito) AGAP001910-PA Anopheles gambiae (mosquito) XP_623731.1 Apis mellifera (honey bee) XP_001947238.1 Acyrthosiphon pisum (pea aphid) At5g35530.1 Arabidopsis thaliana (wall cress) 91509 Batrachochytrium dendrobatidis (chytrid fungus) 109819 Branchiostoma floridae (lancelet) XP_001893846.1 Brugia malayi (roundworm nematode) BGIBMGA009319-PA Bombyx mori (silk worm) ENSBTAP00000003962 Bos taurus (bovine) CAL0001259 Candida albicans (a form of yeast) CN06335 Caenorhabditis brenneri (small nematode) CBP12814 Caenorhabditis briggsae (nematode) CE01810 Caenorhabditis elegans (worm) ENSCAFP00000008052 Canis familiaris (dog) CAGL0J11220g Candida glabrata (haploid yeast) Chro.70257 Cryptosporidium hominis (obligate parasite) ENSCINP00000010313 Ciona intestinalis (sea squirt) JA00645 Caenorhabditis japonica (nematode) CMN148C Cyanidioschyzon merolae (red alga) cn01107 Cryptococcus neoformans (yeast-like fungus) cgd7_2250 Cryptosporidium parvum (protozoan parasite) CPIJ013941 Culex pipens (mosquito) ENSCPOP00000004201 Cavia porcellus (guinea pig) 134051 Chlamidomonas reinhardtii (green alga) RP37645 Caenorhabditis remanei (nematode) ENSCSAVP00000005843 Ciona savignyi (sedentary tunicate) 171942 Capitella spl (polychaete worm) DDB0201667 Dictyostelium discoideum (amoeba) DEHA2G22770g Debaryomyces Hansenii (yeast) 306633 Daphnia pulex (daphnia) ENSDARP00000067802 Danio rerio (zebra fish) ENSECAP00000011789 Equus caballus (horse) NP_417773.1 Escherichia coli K12 (bacteria) XP_649921 Entamoeba histolytica (anaerobic protozoan) XP_657508 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000017707 Gymnopilus aculeatus (mushroom) ENSGALP00000035584 Gallus gallus (chicken) GL50803_7999 Giardia lamblia (flagellated protozoan) 175017 Hypsipyla robusta (cedar shoot borer) ENSP00000278572 Homo sapiens (human) KLLA0D08305g Kluyveromyces lactis (yeast) 223917 Lottia gigantea (owl limpet) LmjF15.0950 Leishmania major (virus) LmjF33.0920 Leishmania major (virus) 31678 Monocosta brevicollis (choanoflagellate) ENSMODP00000008611 Monodelphis domestica (gray opossum) ENSMMUP00000036826 Macaca mulatta (rhesus monkey) ENSMUSP00000032998 Mus musculus (house mouse) 158071 Nematostella vectensis (starlet anemone) XP_001599651.1 Nasonia vitripennis (wasp) ENSOANP00000015772 Ornithorynchus anatinus (platypus) ENSORLP00000000748 Oryzias latipes (japanese killifish) LOC_Os03g38000.1 Oryza sativa (asian rice) 28059 Ostreococcus tauri (green alga) PF14_0627 Plasmodium falciparum (protozoal parasite) PHUM004224-PA Pediculus humanus (human body louse) PP06665 Pristionchus pacificus (nematode) 162268 Physcomitrella patens (moss) 166897 Physcomitrella patens (moss) 178266 Physcomitrella patens (moss) 206021 Physcomitrella patens (moss) 227837 Physcomitrella patens (moss) 234463 Physcomitrella patens (moss) ENSPPYP00000004215 Pongo pygmaeus (orangutan) 71822 Phytophthora ramorum (sudden oak death pathogen) 108569 Phytophthora sojae (root rot pathogen) 832072 Populus trichocarpa (black cottonwood) 835145 Populus trichocarpa (black cottonwood) ENSPTRP00000026978 Pan troglodytes (chimpanzee) PVX_117170 Plasmodium vivax (protozoal parasite) ENSRNOP00000023935 Rattus norvegicus (norway rat) 4749754 Sorghum bicolor (sorghum) YNL178W Saccharomyces cerevisiae (budding yeast) Smp_027610 Schistosoma mansoni (trematode parasite) SPBC16G5.14c Schizosaccharomyces pombe (fission yeast) XP_001204398.1 Strongylocentrotus purpuratus (purple sea urchin) 38207 Trichoplax adhaerens (metazoa) TA08340 Theileria annulata (apicomplexan parasite) XP_970587.1 Tribolium castaneum (red flour beetle) Tc00.1047053430605.29 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053504021.109 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053507677.39 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053509353.30 Trypanosoma cruzi (parasitic trypanosome) TP04_0421 Theileria parva (parasitic protozoan) 28049 Thalassiosira pseudonana (marine diatom) ENSTRUP00000014737 Takifugu rubripes (pufferfish Takifugu) 3826.m00073 Tetrahymena thermophila (ciliate protozoa) 83923.m00171 Trichomonas vaginalis (parasitic flagellated protozoan) 86319.m00299 Trichomonas vaginalis (parasitic flagellated protozoan) 89018.m00105 Trichomonas vaginalis (parasitic flagellated protozoan) 90925.m00104 Trichomonas vaginalis (parasitic flagellated protozoan) 94782.m00173 Trichomonas vaginalis (parasitic flagellated protozoan) 96252.m00340 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000023473 Xenopus tropicalis (frog) YALI0E23694g Yarrowia lipolytica (nonconventional yeast) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB11760 NV17832 LH14507 FBgn0068050 FBgn0216117 FBgn0061220 FBgn0192469 FBgn0181355 JGI_V11_306633 FBgn0246533 FBgn0079854 FBgn0151237 FBgn0144776 FBgn0127464 FBgn0103503 FBgn0093266 CPIJ013941 BGIBMGA009319 ACYPI005949 GB15637 AGAP001910 AAEL008192 PHUM060690 GLEAN_08261
Stocks & Reagents
Stocks Listed in FlyBase ( 14 )
Bloomington	1696 RpS32/TM2 31625 y1 v1; P{TRiP.JF01410}attP2 527 l(3)ac1 es RpS31/LVM 542 RpS33/In(3R)C, e1 l(3)e1 2148 Ki1 pp RpS32 Bsb1/TM3 35410 y1 sc* v1; P{TRiP.GL00332}attP2 544 RpS34/In(3R)C, Sb1 e1 l(3)e1
Kyoto	101667 In(3R)C, e1 l(3)e1 / RpS32 108345 w1118; P{neoFRT}82B P{Ubi-GFP(S65T)nls}3R P{A92}RpS3Plac92/TM6B, Tb1
VDRC	v106321 P{KK109080}VIE-260B v37741 w1118; P{GD4577}v37741 v37742 w1118; P{GD4577}v37742
	More stocks available...
Genomic Clones ( 2 )
	BACR01E13 BACR15B19 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 1233 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	IP15838 LD47488
Other clones	yak-ad_RpS3 yak-em_RpS3
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT08241 AT31313 GH01683 GH03049 GH03405 GH03740 GH04428 GH04521 GH05212 GH06147 GH07703 GH09320 GH12393 GH13166 GH13549 GH15557 GH17640 GH18233 GH18442 GH18775 GH19294 GH19707 GH19961 GH20465 GH21876 GH22973 GH23386 GH23791 GH24696 GH25648 GH26502 GH27170 GM01694 GM03064 GM03607 GM04477 GM07717 GM08017 GM12748 GM14955 GM16243 GM17234 GM18602 GM21310 GM21720 GM23239 GM23606 GM27154 GM27931 GM28057 GM29995 GM30440 LD02892 LD08560 LD08568 LD09545 LD09690 LD11767 LD12184 LD13523 LD15063 LD15932 LD17849 LD21695 LD22316 LD23428 LD23768 LD26121 LD27109 LD30935 LD31432 LD31633 LD31665 LD36254 LD39003 LD39005 LD44447 LD45358 LD47548 LP01285 LP02152 LP02304 LP03563 LP03570 LP04843 LP04937 LP05159 LP05991 LP06024 LP06060 LP06988 LP09328 LP09381 LP10845 LP15294 LP15658 LP16632 LP17403 LP19101 LP19664 LP21061 LP22707 LP22718 RE04420 RE55996 RE59440 RE59542 RE62170 RE62295 RE67920 RE68048 RE70863 RE72203 RE72917 RE73496 RE73626 RH10318 RH30521 RH37064 RH37475 RH65586 RH69982 RH70065 SD01246 SD01361 SD01888 SD02872 SD04449 SD05057 SD06641 SD08030 SD08268 SD10084 SD11315 SD12677 SD12877 SD13243 SD13334 SD13560 SD13921 SD14013 SD14107 SD14748 SD15180 SD15522 SD16084 SD16655 SD16805 SD17262 SD17908 SD17917 SD17956 SD18394 SD18728 SD19392 SD19482 SD20282 SD20323 SD20767 SD20911 SD20950 SD21445 SD21811 SD23112 SD23663 SD24029 SD24096 SD24958 SD25420 SD26103 SD26558 SD26943 SD27326 SD28130 SD28255
Other clones	16491 44094 53902 63485 63775 73305 106056 108037 158350 161278 190462 473466 522371 522475 522777 523403 524268 524292 524544 524918 525692 527122 528317 533524 533634 533835 557035 557957 558058 561942 562190 568967 569224 569530 572931 CK01.6A.D7 CK01.19C.B12 CK01.64D.A12 CK01.66A.H4 CK01.75D.H3 CK01.91A.E8 Dmel_dig_001524_0701_0448 Dmel_dig_002878_0654_2685 Dmel_dig_004398_0671_1643 Dmel_dig_006633_0653_1446 Dmel_dig_007313_0598_3440 Dmel_dig_008367_0684_0797 Dmel_dig_011035_0643_3259 Dmel_dig_011480_0657_2660 Dmel_dig_013504_0682_1673 Dmel_dig_015561_0682_3033 Dmel_dig_015658_0654_0473 Dmel_dig_018260_0651_3388 Dmel_dig_018800_0630_0370 Dmel_dig_018992_0625_3198 Dmel_dig_020214_0704_2740 Dmel_neb_003086_0883_3739 Dmel_neb_008216_0955_0539 Dmel_neb_009732_0910_2511 Dmel_neb_011277_0921_2097 Dmel_neb_011676_0445_0853 Dmel_neb_011982_0856_2449 Dmel_neb_012943_0151_2744 Dmel_neb_013450_0893_1240 Dmel_neb_013939_0868_0391 Dmel_neb_013957_0615_1749 Dmel_neb_014837_0657_1324 Dmel_neb_015285_0608_1598 Dmel_neb_015435_0365_2695 EC22974 EC24396 EC31138 EC32396 EC35582 EC35933 EC39587 EC43746 EK009216 EK053762 EK101101 EK111607 EK169001 EK190958 EK207643 EK244060 EK288308 EK292629 EN00123 EN01915 EN02112 EN02752 EN03846 EN05051 EN05122 EN05560 EN05908 EN06154 EN06945 EN07319 EN09443 EN09658 EN09914 EN10243 EN10708 EN11914 EN12725 EN12808 EN12921 EN13861 EN14253 EN14760 EN15063 EN17533 ESG0115b.B21_D06 FGC005F08 FGC022A08 FGC022D01 FGC024B02 FGC024G02 FGC028C01 FGC032C12 FGH109E07 FGH113H10 FGH120H07 FGH122C09 FGH129H09 FGM105H09 FGM211A05 FGM212C10 FGM222F04 FGM225G02 FGM228A01 FGM229A04 FGM235F12 FGM312C11 FGM316E08 FGM324A10 GH01018 GH15187 GM01039 GM01874 GM02657 GM03139 GM04133 GM04203 GM05408 GM07004 GM07782 GM08323 GM09745 GM10448 GM12651 GM15358 GM16078 GM16595 GM18179 GM18533 GM18980 GM19737 GM20801 GM21810 GM22638 GM27656 GM28162 GM28370 GM28407 GM28878 GM28970 GM29126 GM29437 GM32585 HL04843 IP04361 IP05964 IP06305 IP17812 LD09245 LD10484 LD15774 LD22028 LD29606 LD29629 LD31237 LD32854 LP09785 LP17913 RE01001 RE01191 RE01784 RE02732 RE03882 RE04818 RE05746 RE06049 RE07223 RE07469 RE08115 RE08672 RE09618 RE10775 RE11008 RE11303 RE12450 RE13595 RE14083 RE17063 RE17188 RE17205 RE18717 RE19384 RE20345 RE20507 RE21481 RE21819 RE25222 RE25653 RE28326 RE34065 RE34907 RE35714 RE35966 RE39549 RE39616 RE41317 RE41705 RE43022 RE43230 RE44712 RE45627 RE47712 RE48010 RE49777 RE50081 RE50481 RE51714 RE52301 RE53733 RE54017 RE54425 RE54851 RE57993 RE58019 RE60206 RE65112 RE66326 RE67767 RE67976 RE68440 RE69420 RH02844 RH03055 RH03705 RH03718 RH03769 RH04434 RH04796 RH05236 RH05390 RH05408 RH05736 RH06050 RH06057 RH06734 RH07030 RH07301 RH07596 RH07660 RH07717 RH07928 RH08074 RH08751 RH08934 RH08948 RH08953 RH08960 RH09057 RH09124 RH09310 RH09435 RH09932 RH09996 RH10326 RH12179 RH13257 RH14330 RH14355 RH14436 RH14661 RH14746 RH16005 RH16050 RH16215 RH16269 RH16938 RH17003 RH17257 RH17414 RH17417 RH17551 RH17563 RH19638 RH19670 RH19717 RH20717 RH20976 RH20989 RH21004 RH21040 RH21919 RH22171 RH22274 RH22831 RH22889 RH23432 RH23628 RH23745 RH23944 RH23985 RH24033 RH24082 RH24192 RH24661 RH24680 RH25155 RH25542 RH25588 RH25735 RH25969 RH26283 RH26758 RH26781 RH26862 RH27326 RH27569 RH27919 RH28531 RH28581 RH28592 RH28785 RH29051 RH29254 RH29318 RH29333 RH30155 RH30754 RH31061 RH31283 RH31361 RH31626 RH31641 RH31707 RH32009 RH32628 RH32771 RH33083 RH33269 RH33367 RH33586 RH33626 RH34134 RH34157 RH34419 RH34641 RH34684 RH34973 RH35135 RH35232 RH35643 RH36382 RH36615 RH36839 RH37280 RH37702 RH37925 RH37973 RH38328 RH38440 RH38518 RH39226 RH39362 RH39484 RH39993 RH40686 RH40759 RH41647 RH41671 RH42791 RH43024 RH43467 RH43518 RH43535 RH43704 RH43796 RH43988 RH44183 RH44370 RH44387 RH44451 RH44657 RH44988 RH45027 RH45313 RH45754 RH46078 RH46181 RH47162 RH47954 RH48058 RH48706 RH48759 RH48803 RH48815 RH48916 RH49344 RH49722 RH49731 RH50232 RH50235 RH50562 RH51044 RH51227 RH51349 RH51610 RH51622 RH51631 RH51821 RH52193 RH52256 RH52377 RH52436 RH52457 RH52686 RH52773 RH52996 RH53239 RH53270 RH54207 RH54319 RH54347 RH54545 RH54627 RH54678 RH54706 RH54719 RH54909 RH55410 RH55430 RH55457 RH56066 RH56157 RH56531 RH56782 RH57120 RH58035 RH58302 RH58455 RH58538 RH58563 RH58647 RH58747 RH59163 RH59379 RH59489 RH59818 RH60556 RH60731 RH60828 RH61140 RH61223 RH61261 RH61344 RH61347 RH61491 RH62326 RH62713 RH62867 RH63394 RH63630 RH63803 RH63942 RH64185 RH64289 RH64382 RH65147 RH65638 RH66022 RH66161 RH66169 RH66392 RH66470 RH67485 RH67622 RH67625 RH68560 RH69050 RH69342 RH69367 RH69524 RH69559 RH69947 RH70202 RH70275 RH70310 RH70373 RH70696 RH71991 RH72940 RH73258 RH73266 RH73655 RH74255 RH74341 RH74402 RH74512 RP003002936 RP003005549 RP003006331 RP003007536 RP003010634 RP003010788 RP003014598 RP003015127 RP003015938 RP003019489 RP003020092 RP003020360 RP003020610 RP003021236 RP003021354 RP003022144 RP003025992 RP003028443 RP003028686 RP003030699 RP003032143 RP003033334 RP003035003 RP003038618 RP003039461 RP003044403 RP003046555 RP003051792 RP003052205 RP003053531 RP003056565 RP003057191 RP003060420 RP003062339 RP003064907 RP003064919 RP003066303 RP003066995 RP003070100 RP003070150 RP003070668 RP003071634 RP003074390 RP003075224 RP003077019 RP003077953 RP003079255 RP003085604 RP003085927 RP003086623 RP003088203 RP003092530 RP003092791 RP003094059 RP003094278 RP003094489 RP003095311 RP003097643 RP003098358 RP003098712 RP003099348 RP003103619 RP003104287 RP003107216 RP003109883 RP003110066 RP003110429 RP003112112 RP003118380 RP003118486 RP003119843 RP003121802 RP003121906 RP003121940 RP003122467 RP003126428 RP003127333 RP003128598 RP003129453 RP003129563 RP003131168 RP003132079 RP003135177 RP003136873 RP003137503 RP003140521 RP003140743 RP003143938 RP003145285 RP003146210 RP003147119 RP003149566 RP003149993 RP003151777 RP003153170 RP003154487 RP003157873 RP003159283 RP003159287 RP003161929 RP003163158 RP003164329 RP003165057 RP003165198 RP003166251 RP003166909 RP003168158 RP003168797 RP003172774 RP003175549 RP003175986 RP003177432 RP003177852 RP003178379 RP003178495 RP003179308 RP003181133 RP003182693 RP003182753 RP003182801 RP003182874 RP003183035 RP003183270 RP003185502 RP003186012 RP003187083 RP003187201 RP003187381 RP003187400 RP003188362 RP003188476 RP003190464 RP003191003 RP003191132 RP003192858 RP003195678 RP003197132 RP003198124 RP003199783 RP003200607 RP003201034 RP003202334 RP003202771 RP003203454 RP003205024 RP003207338 RP003207776 RP003208777 RP003209386 RP003209474 RP003210705 RP003210941 RP003211843 RP003212440 RP003214735 RP003215660 RP003221803 RP003222591 RP003224646 RP003224798 RP003224880 RP003225694 RP003226541 RP003227400 RP003227505 RP003230950 RP003232783 RP003232962 RP003235982 RP003236177 RP003236424 RP003240898 RP003241221 RP003241687 RP003245111 RP003245993 RP003246068 RP003248472 RP003248690 RP003248933 RP003249093 RP003249202 RP003249672 RP003252058 RP003253088 RP003254106 RP003254466 RP003255475 RP003257165 RP003258344 RP003262079 RP003262490 RP003264522 RP003264895 RP003265821 RP003266414 RP003266625 RP003267817 RP003267849 RP003268194 RP003270018 RP003270144 RP003270988 RP003273195 RP003275241 RP003275384 RP003275391 RP003276700 RP003276822 RP003277802 RP003280493 RP003282583 RP003283520 RP003284098 RP003285352 RP003285958 RP003286052 RP003286094 RP003287627 RP003289132 RP003289970 RP003291378 RP003295282 RP003296308 RP003296998 RP003297700 RP003298690 RP003299128 RP003301579 RP003302178 RP003304812 RP003305192 RP003307296 RP003307301 RP003308201 RP003308827 RP003309061 RP003309183 RP003313773 RP003314379 RP003316686 RP003316824 RP003317696 RP003318336 RP003318611 RP003319141 RP003321871 RP003321932 RP003323225 RP003323751 RP003324005 RP003325689 RP003326167 RP003326234 RP003326807 RP003329843 RP003329850 RP003330051 RP003334845 RP003335028 RP003335059 RP003335591 RP003335600 RP003335642 RP003335799 RP003335874 RP003336432 RP003336810 RP003337662 RP003339591 RP003340145 RP003341131 RP003341342 RP003344481 RP003347962 RP003348283 RP003349025 RP003349226 RP003349397 RP003349837 RP003350814 RP003350966 RP003353051 RP003356501 RP003356818 RP003356993 RP003359804 RP003362086 RP003375476 RP003381434 RP003381435 RP003381690 RP003382536 RP003383181 RP003385448 RP003387783 RP003389164 RP003390001 RP003390940 RP003395236 RP003398189 RP003401757 RP003403055 RP003404254 RP003405243 RP003406268 RP003406492 RP003406887 RP003408223 RP003409202 RP003409894 RP003416655 RP003417896 RP003418288 RP003419496 RP003420946 RP003421828 RP003422919 RP003426711 RP003427640 RP003432638 RP003433407 RP003434164 RP003438339 RP003438903 RP003439126 RP003439581 RP003442170 RP003442314 RP003443594 RP003444563 RP003445034 RP003447065 RP003450907 RP003451746 RP003452761 RP003453245 RP003453742 RP003456452 RP003457965 RP003458250 RP003458441 RP003462321 RP003464538 RP003465881 RP003466906 RP003471822 RP003474730 RP003475397 RP003476063 RP003476210 RP003483042 RP003483909 RP003483919 RP003486481 RP003487532 RP003489507 RP003489571 RP003489905 RP003490724 RP003491187 RP003496493 RP003501044 RP003501648 RP003503938 RP003504500 RP003504895 RP003506226 RP003508161 RP003509768 RP003509804 RP003513815 RP003515794 RP003519604 RP003521935 RP003522299 RP003522705 RP003525682 RP003525808 RP003526108 RP003530865 RP003531177 RP003533277 RP003533509 RP003533966 RP003534832 RP003535670 RP003536681 RP003540151 RP003540691 RP003541631 RP003542174 RP003542465 RP003543774 RP003545352 RP003545545 RP003545723 RP003545987 RP003546761 RP003548210 RP003548306 RP003551057 RP003552392 RP003554164 RP003555381 RP003555437 RP003556617 RP003557261 RP003559450 RP003560856 RP003560963 RP003561340 RP003562320 RP003562536 RP003562581 RP003563000 RP003563113 RP003563741 RP003566064 RP003566727 RP003567506 RP003568115 RP003569000 RP003573738 RP003574728 RP003575852 RP003578315 RP003578843 RP003579290 RP003579933 RP003580357 RP003580835 RP003581916 RP003582057 RP003583132 RP003584017 RP003584307 RP003584541 RP003585587 RP003587025 RP003587934 RP003588267 RP003588715 RP003588788 RP003589773 RP003590019 RP003590663 RP003593840 RP003594825 RP003597543 RP003599778 RP003601194 RP003601699 RP003601813 RP003608578 RP003609769 RP003611564 RP003611866 RP003611890 RP003617685 RP003617843 RP003618207 RP003618333 RP003619962 RP003622391 RP003622481 RP003623148 RP003624474 RP003627289 RP003630767 RP003631209 RP003633675 RP003637116 RP003637297 RP003637988 RP003638593 RP003639370 RP003640481 RP003642507 RP003644859 RP003644980 RP003646193 RP003646399 RP003648154 RP003648948 RP003651355 RP003656570 RP003656688 RP003656946 RP003657495 RP003660938 RP003661748 RP003662421 RP003664554 RP003666216 RP003666756 RP003667681 RP003669352 RP003669518 RP003672287 RP003674552 RP003676372 RP003680569 RP003681454 RP003681729 SD03784 SD04252 SD04553 SD05056 SD05473 SD07216 SD11074 SD11121 SD12930 SD13234 SD13404 SD13428 SD14192 SD14760 SD14833 SD15204 SD15665 SD15818 SD16018 SD16933 SD17523 SD18167 SD19357 SD21259 SD22209 SD23072 SD24925 SD26283 SD26425 SD27508 SD27893 UT01468 UT01780 UT01869 UUGC1160
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0002622 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42761
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
	Minute gene. (Marygold et al., 2007) Deletions removing RpS3 but no other cytoplasmic ribosomal protein-encoding genes show Minute phenotypes. (Marygold et al., 2007) Molecularly-defined mutations in RpS3 result in Minute phenotypes. (Marygold et al., 2007) RNAi generated by PCR using primers directed to this gene causes a cell growth and viability phenotype when assayed in Kc167 and S2R+ cells. (Boutros et al., 2004) Identified with: GH06471 (BDGP-DGC) <up>FlyBase curator comment: EST subsequently found to be chimeric</up>. (BDGP Project Members, 2000-) Analysis of complete and partial revertants of RpS3Plac92 reveals that different degrees of RpS3 insufficiency produces distinct phenotypes, in which the penultimate effect prior to lethality constitutes arrest of gametogenesis and many morphological defects. (Saeboe-Larssen et al., 1998) Calf thymus DNA exposed to γ-irradiation under N2O can be used as a means of testing for N-glycosylase activity. 8-oxoGua and FapyGua are efficiently released from the irradiated DNA substrate. The ability of RpS3 to act on base mismatches opposite 8-oxoGua and the formation of an amino intermediate are studied to characterise the N-glycosylase activity of the protein. (Deutsch et al., 1997) RpS3 is demonstrated to have dRpase activities and this suggests the ribosomal protein may be active in several steps of the DNA base excision repair pathway. (Sandigursky et al., 1997) DNA repair activities are associated with RpS3 in vitro. The repair activities directed towards the mutagenic lesions 8-oxoguanine and abasic sites in DNA are able to act in vivo to protect yeast cells from H2O22 and MMS toxicity. Results suggest the possibility that RpS3 may participate in both base excision repair and protein translation. (Yacoub et al., 1996) RpS3 encodes a ribosomal protein. (Andersson et al., 1994) P-element mutagenesis confirms S3 as a Minute gene, mobilisation of the P-element reverts the flies to wild type. (Wilson et al., 1994) Biochemical properties of the recombinant protein demonstrate RpS3 is capable of acting on DNA containing apurinic/apyrimidinic (AP) sites. The protein is tightly associated with the nuclear matrix suggesting the protein may have a function in DNA repair. (Wilson et al., 1994) Cloned by hybridization to rat S3 cDNA probe. The RpS3 gene product has AP endonuclease activity. (Wilson et al., 1993) Strong Minute; eclosion delayed 40 hours (Ferrus, 1975). (Gonzalez et al., 1989) Mutant alleles have the developmental delay and bristle phenotype that makes them useful as markers in clonal analysis. (Lawrence et al., 1986) One of a class of genes (see MIN record) that when present in one, rather than two, copies, produce a characteristic phenotype consisting of short slender bristles and delayed development.
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_057284 RefSeq (Proteins) • NP_476632 DDBJ / EMBL / GenBank • AAA28875 AAF56129 AAM50831 AC010670 AI107157 AI515599 AY118971 BT003618 CAA51425 L13690 X72921 Entrez Gene - A searchable database of RefSeq genes. • 42761 UniProtKB/Swiss-Prot • Q06559
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Ribosomal protein S3, conserved site (IPR018280) Ribosomal protein S3, C-terminal (IPR001351) K Homology, type 2 (IPR004044) Ribosomal protein S3, eukaryotic/archaeal (IPR005703) K Homology, prokaryotic type (IPR009019) K Homology (IPR004087) K homology domain-like, alpha/beta (IPR015946)
Linkouts
	BioGRID - A database of protein and genetic interactions • 67703 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0002622 DroID - A comprehensive database of gene and protein interactions. • FBgn0002622 DRSC - Results from RNAi screens. • FBgn0002622 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0002622 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6779-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0002622 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42761 InParanoid A subset of ortholog calls from InParanoid. • AAEL008192-PB Aedes aegypti (mosquito) AGAP001910-PA Anopheles gambiae (mosquito) XP_623731.1 Apis mellifera (honey bee) XP_001947238.1 Acyrthosiphon pisum (pea aphid) At5g35530.1 Arabidopsis thaliana (wall cress) 91509 Batrachochytrium dendrobatidis (chytrid fungus) 109819 Branchiostoma floridae (lancelet) XP_001893846.1 Brugia malayi (roundworm nematode) BGIBMGA009319-PA Bombyx mori (silk worm) ENSBTAP00000003962 Bos taurus (bovine) CAL0001259 Candida albicans (a form of yeast) CN06335 Caenorhabditis brenneri (small nematode) CBP12814 Caenorhabditis briggsae (nematode) CE01810 Caenorhabditis elegans (worm) ENSCAFP00000008052 Canis familiaris (dog) CAGL0J11220g Candida glabrata (haploid yeast) Chro.70257 Cryptosporidium hominis (obligate parasite) ENSCINP00000010313 Ciona intestinalis (sea squirt) JA00645 Caenorhabditis japonica (nematode) CMN148C Cyanidioschyzon merolae (red alga) cn01107 Cryptococcus neoformans (yeast-like fungus) cgd7_2250 Cryptosporidium parvum (protozoan parasite) CPIJ013941 Culex pipens (mosquito) ENSCPOP00000004201 Cavia porcellus (guinea pig) 134051 Chlamidomonas reinhardtii (green alga) RP37645 Caenorhabditis remanei (nematode) ENSCSAVP00000005843 Ciona savignyi (sedentary tunicate) 171942 Capitella spl (polychaete worm) DDB0201667 Dictyostelium discoideum (amoeba) DEHA2G22770g Debaryomyces Hansenii (yeast) 306633 Daphnia pulex (daphnia) ENSDARP00000067802 Danio rerio (zebra fish) ENSECAP00000011789 Equus caballus (horse) NP_417773.1 Escherichia coli K12 (bacteria) XP_649921 Entamoeba histolytica (anaerobic protozoan) XP_657508 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000017707 Gymnopilus aculeatus (mushroom) ENSGALP00000035584 Gallus gallus (chicken) GL50803_7999 Giardia lamblia (flagellated protozoan) 175017 Hypsipyla robusta (cedar shoot borer) ENSP00000278572 Homo sapiens (human) KLLA0D08305g Kluyveromyces lactis (yeast) 223917 Lottia gigantea (owl limpet) LmjF15.0950 Leishmania major (virus) LmjF33.0920 Leishmania major (virus) 31678 Monocosta brevicollis (choanoflagellate) ENSMODP00000008611 Monodelphis domestica (gray opossum) ENSMMUP00000036826 Macaca mulatta (rhesus monkey) ENSMUSP00000032998 Mus musculus (house mouse) 158071 Nematostella vectensis (starlet anemone) XP_001599651.1 Nasonia vitripennis (wasp) ENSOANP00000015772 Ornithorynchus anatinus (platypus) ENSORLP00000000748 Oryzias latipes (japanese killifish) LOC_Os03g38000.1 Oryza sativa (asian rice) 28059 Ostreococcus tauri (green alga) PF14_0627 Plasmodium falciparum (protozoal parasite) PHUM004224-PA Pediculus humanus (human body louse) PP06665 Pristionchus pacificus (nematode) 162268 Physcomitrella patens (moss) 166897 Physcomitrella patens (moss) 178266 Physcomitrella patens (moss) 206021 Physcomitrella patens (moss) 227837 Physcomitrella patens (moss) 234463 Physcomitrella patens (moss) ENSPPYP00000004215 Pongo pygmaeus (orangutan) 71822 Phytophthora ramorum (sudden oak death pathogen) 108569 Phytophthora sojae (root rot pathogen) 832072 Populus trichocarpa (black cottonwood) 835145 Populus trichocarpa (black cottonwood) ENSPTRP00000026978 Pan troglodytes (chimpanzee) PVX_117170 Plasmodium vivax (protozoal parasite) ENSRNOP00000023935 Rattus norvegicus (norway rat) 4749754 Sorghum bicolor (sorghum) YNL178W Saccharomyces cerevisiae (budding yeast) Smp_027610 Schistosoma mansoni (trematode parasite) SPBC16G5.14c Schizosaccharomyces pombe (fission yeast) XP_001204398.1 Strongylocentrotus purpuratus (purple sea urchin) 38207 Trichoplax adhaerens (metazoa) TA08340 Theileria annulata (apicomplexan parasite) XP_970587.1 Tribolium castaneum (red flour beetle) Tc00.1047053430605.29 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053504021.109 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053507677.39 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053509353.30 Trypanosoma cruzi (parasitic trypanosome) TP04_0421 Theileria parva (parasitic protozoan) 28049 Thalassiosira pseudonana (marine diatom) ENSTRUP00000014737 Takifugu rubripes (pufferfish Takifugu) 3826.m00073 Tetrahymena thermophila (ciliate protozoa) 83923.m00171 Trichomonas vaginalis (parasitic flagellated protozoan) 86319.m00299 Trichomonas vaginalis (parasitic flagellated protozoan) 89018.m00105 Trichomonas vaginalis (parasitic flagellated protozoan) 90925.m00104 Trichomonas vaginalis (parasitic flagellated protozoan) 94782.m00173 Trichomonas vaginalis (parasitic flagellated protozoan) 96252.m00340 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000023473 Xenopus tropicalis (frog) YALI0E23694g Yarrowia lipolytica (nonconventional yeast) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42761 modMine - Data generated by the modENCODE project. • FBgn0002622 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB11760 NV17832 LH14507 FBgn0068050 FBgn0216117 FBgn0061220 FBgn0192469 FBgn0181355 JGI_V11_306633 FBgn0246533 FBgn0079854 FBgn0151237 FBgn0144776 FBgn0127464 FBgn0103503 FBgn0093266 CPIJ013941 BGIBMGA009319 ACYPI005949 GB15637 AGAP001910 AAEL008192 PHUM060690 GLEAN_08261
Synonyms & Secondary IDs ( 27 )
Reported As
Symbol Synonym	6779 (Ravi et al., 2009) CG6779 (Cermelli et al., 2006, Ducat et al., 2008, Worringer et al., 2009, Pisa et al., 2009, Keleman et al., 2009.8.5, Marygold et al., 2007, Hughes et al., 2008, Piacentini et al., 2009, Ni et al., 2008, Ni et al., 2011.7.19, Cammarato et al., 2011) DmRpS3 (Lyamouri et al., 2002) dS3 (Hegde et al., 2001, Kelley et al., 2001) M95A (Tu et al., 2007) M(3)95A (Coelho et al., 2005, Prober and Edgar, 2000, Montagne et al., 1999, Percival-Smith and Hayden, 1998, Neufeld et al., 1998, Saeboe-Larssen et al., 1998, Rasmuson-Lestander et al., 1993, Gonzalez et al., 1989, Tu and Johnston, 2008, de Navascués and Modolell, 2010) M(3)124   M(3)B   M(3)B2   M(3)Fla   M(3)w (Giraldez and Cohen, 2003, Rasmuson-Lestander et al., 1993, Lawrence et al., 1986, Reuter et al., 1986, Kongsuwan et al., 1985, Vassin et al., 1985, Dietrich and Campos-Ortega, 1984, Roberts and Broderick, 1982, Broderick and Roberts, 1982, Lindsley et al., 1972, Seattle-La Jolla Drosophila Laboratories, 1971, ) M(3R)w (Ferrus, 1975, Hasegawa et al., 2011) Mw (Schultz, 1929) Mw (Dunn and Mossige, 1937, ) RpS (Marygold et al., 2007) RpS3 (Wang et al., 2004, Cermelli et al., 2006, Mandal et al., 2005, Tu and Johnston, 2008, Stieper et al., 2008, Worringer et al., 2009, Pisa et al., 2009, Nie et al., 2009, Marygold et al., 2007, Zirin and Mann, 2007) Rps3 (Bullerwell et al., 2000, Morris et al., 2008) rpS3 (Lambertsson et al., 1997, Andersson et al., 1994, ) rps3 (Tu et al., 2007) Rp S3 (Alonso and Santaren, 2006) RS3 (Mushegian et al., 1998) S3 (Molnar et al., 2003, Boiteux and Radicella, 1999, Deutsch et al., 1995, Wilson et al., 1994) X72921 (Ptak and Petrov, 2002)
Name Synonym	Minute(3)95A   ribosomal protein S3 (Wilson, 1993) Ribosomal protein S3 (Ducat et al., 2008, Pisa et al., 2009, Cammarato et al., 2011) rps3 gene (Lambertsson, 1993.3.29)
Secondary FlyBase IDs
	FBgn0010267
References ( 104 )
Generate a list of	All references relating to this gene ( 104 )
List References by type	Research paper  ( 72 ) Supplementary material  ( 6 ) Review  ( 1 ) Personal communication to FlyBase  ( 5 ) Abstract  ( 9 ) FlyBase analysis  ( 2 ) DNA/RNA sequence record  ( 2 ) Computer file  ( 1 ) Protein sequence record  ( 1 ) Book  ( 2 ) Curated genome annotation  ( 1 ) Automatic genome annotation  ( 1 ) Thesis  ( 1 )
Recent research papers ( 7 )
	Bel et al., 2011, BMC Res. Notes 4: 84 Quantitative real-time PCR with SYBR Green detection to assess gene duplication in insects: study of gene dosage in Drosophila melanogaster (Diptera) and in Ostrinia nubilalis (Lepidoptera). [FBrf0213521] Booker et al., 2011, BMC Genomics 12: 50 False negative rates in Drosophila cell-based RNAi screens: a case study. [FBrf0212969] Casad et al., 2011, Genetics 189(3): 861--870 Cardiomyopathy Is Associated with Ribosomal Protein Gene Haplo-Insufficiency in Drosophila melanogaster. [FBrf0216591] Hasegawa et al., 2011, Development 138(5): 983--993 Concentric zones, cell migration and neuronal circuits in the Drosophila visual center. [FBrf0213020] Molnar et al., 2011, PLoS Genet. 7(3): e1001335 Role of the Drosophila non-visual ß-arrestin kurtz in hedgehog signalling. [FBrf0213301] Parker and Shingleton, 2011, Dev. Biol. 357(2): 318--325 The coordination of growth among Drosophila organs in response to localized growth-perturbation. [FBrf0214795] de Navascués and Modolell, 2010, Mech. Dev. 127(9-12): 393--406 The pronotum LIM-HD gene tailup is both a positive and a negative regulator of the proneural genes achaete and scute of Drosophila. [FBrf0212072] Show all research papers ...
Recent reviews (0)
	All reviews listed in FlyBase were published before 2010 Show reviews ...