A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene Dmel\E(spl)mγ-HLH

General Information
SymbolDmel\E(spl)mγ-HLHSpeciesD. melanogaster
NameEnhancer of split mγ, helix-loop-helixAnnotation symbolCG8333
Feature typeprotein_coding_geneFlyBase IDFBgn0002735
Gene Model StatusCurrent Stock availability 2 publicly available
Also Known Asmγ, E(spl)mγ, HLHmgamma, HLHmγ, E(spl)mgamma, mgamma, E(spl)mB, E(spl) mgamma, E(spl)γ
Genomic Location
Chromosome (arm)3RRecombination map3-89.1
Cytogenetic map96F9-96F9Sequence location3R:21,825,573..21,826,483 [+]

Genomic Maps

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Automatically generated summary

See sections below for more information
The gene Enhancer of split mγ, helix-loop-helix is referred to in FlyBase by the symbol Dmel\E(spl)mγ-HLH (CG8333, FBgn0002735). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: transcription factor binding; sequence-specific DNA binding. There is experimental evidence that it is involved in the biological process: positive regulation of neuroblast proliferation; wing disc dorsal/ventral pattern formation; negative regulation of transcription from RNA polymerase II promoter. 14 alleles are reported. The phenotypes of these alleles are annotated with: adult thorax; wing margin bristle; macrochaeta; scutellar bristle; microchaeta; wing vein. It has one annotated transcript and one annotated polypeptide. Protein features are: Myc-type, basic helix-loop-helix (bHLH) domain; Orange; Orange subgroup. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of extremely low expression. Peak expression observed within 00-12 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval central nervous system. Comments on Affy2 ProbeSet: ProbeSet 1626048_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of HLHmgamma. Gene sequence location is 3R:21825573..21826483.

User Contributed Data
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Description
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
96F9-96F9  
Limits computationally determined from genome sequence between P{PZ}l(3)rQ197rQ197 and P{lacW}scribj7B3  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
96F11-96F14  
Experimentally Determined Recombination Data
Location
3-89.1
 
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\E(spl)mγ-HLH for information on other features GBrowse View Help
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0084954 FBtr0084955 FBpp0084328 FBpp0084329 FBti0047091 FBti0115673 FBti0103436 FBti0150693
Comments on Gene Model
Gene model reviewed during 5.42
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0084955
  911
  205
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0084329  
23.1  
205  
7.24  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
The predicted protein products of the seven HLH genes in the Dhyd\E(spl) complex exhibit a great degree of sequence similarity extending over the first 120 amino acids of the proteins. The carboxy terminus is unique for each except for the terminal 4 amino acids, which are identical in all of the proteins.
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
protein binding site
bound_moiety=Su(H)-XP
comment=Su(H)-protein-binding site mgammaS5 (complement)
evidence=experimental
protein binding site
bound_moiety=Su(H)-XP
comment=Su(H)-protein-binding site mgammaS4 (complement)
evidence=experimental
protein binding site
bound_moiety=Su(H)-XP
comment=Su(H)-protein-binding site mgammaS3
evidence=experimental
protein binding site
bound_moiety=Su(H)-XP
comment=Su(H)-protein-binding site mgammaS2
evidence=experimental
protein binding site
bound_moiety=Su(H)-XP
comment=Su(H)-protein-binding site mgammaS1 (complement)
evidence=experimental
regulatory region
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
Comment:reported as procephalic ectoderm anlage
Comment:reported as procephalic ectoderm anlage
Comment:reported as procephalic ectoderm anlage
Comment:reported as procephalic ectoderm anlage
Comment:transiently expressed
Comment:reported as procephalic ectoderm primordium
Comment:reported as procephalic ectoderm primordium
Comment:reported as procephalic ectoderm primordium
Comment:reported as procephalic ectoderm primordium
Comment:reported as procephalic ectoderm primordium
Comment:reported as procephalic ectoderm primordium
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
hide Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term
References
hide Expression Deduced from Reporters
hide High-Throughput Expression Data
Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
hide FlyAtlas Anatomy Microarray

FlyAtlas Anatomical Expression Data

(FlyAtlas-RNA.adult)

(FlyAtlas-RNA.larva)


   Styles
   Scales

Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval central nervous system.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (>999.999)

Linear, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 534.675
Larval Midgut
 
 3.4
Larval Hindgut
 
 5
Larval Malpighian Tubules
 
 2.2
Larval Fat Body
 
 3.6
Larval Salivary Gland
 
 15.3
Larval Trachea
 
 9.6
Larval Carcass
 
 17.525
Adult Head
 
 4.3
Adult Eye
 
 8.15
Adult Brain
 
 1.2
Adult Thoracic-Abdominal Ganglion
 
 2.8
Adult Crop
 
 4.5
Adult Midgut
 
 3.8
Adult Hindgut
 
 2.3
Adult Malpighian Tubules
 
 3.1
Adult Fat Body
 
 16.8
Adult Salivary Gland
 
 30.1
Adult Heart
 
 2.55
Adult VirginFemale Spermatheca
 
 13.9
Adult InseminatedFemale Spermatheca
 
 16.5
Adult Ovary
 
 2.4
Adult Testis
 
 1.9
Adult Male Accessory Gland
 
 7.7
Adult Carcass
 
 11.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 534.675
Larval Midgut
 
 3.4
Larval Hindgut
 
 5
Larval Malpighian Tubules
 
 2.2
Larval Fat Body
 
 3.6
Larval Salivary Gland
 
 15.3
Larval Trachea
 
 9.6
Larval Carcass
 
 17.525
Adult Head
 
 4.3
Adult Eye
 
 8.15
Adult Brain
 
 1.2
Adult Thoracic-Abdominal Ganglion
 
 2.8
Adult Crop
 
 4.5
Adult Midgut
 
 3.8
Adult Hindgut
 
 2.3
Adult Malpighian Tubules
 
 3.1
Adult Fat Body
 
 16.8
Adult Salivary Gland
 
 30.1
Adult Heart
 
 2.55
Adult VirginFemale Spermatheca
 
 13.9
Adult InseminatedFemale Spermatheca
 
 16.5
Adult Ovary
 
 2.4
Adult Testis
 
 1.9
Adult Male Accessory Gland
 
 7.7
Adult Carcass
 
 11.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 534.675
Larval Midgut
 
 3.4
Larval Hindgut
 
 5
Larval Malpighian Tubules
 
 2.2
Larval Fat Body
 
 3.6
Larval Salivary Gland
 
 15.3
Larval Trachea
 
 9.6
Larval Carcass
 
 17.525
Adult Head
 
 4.3
Adult Eye
 
 8.15
Adult Brain
 
 1.2
Adult Thoracic-Abdominal Ganglion
 
 2.8
Adult Crop
 
 4.5
Adult Midgut
 
 3.8
Adult Hindgut
 
 2.3
Adult Malpighian Tubules
 
 3.1
Adult Fat Body
 
 16.8
Adult Salivary Gland
 
 30.1
Adult Heart
 
 2.55
Adult VirginFemale Spermatheca
 
 13.9
Adult InseminatedFemale Spermatheca
 
 16.5
Adult Ovary
 
 2.4
Adult Testis
 
 1.9
Adult Male Accessory Gland
 
 7.7
Adult Carcass
 
 11.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 534.675
Larval Midgut
 
 3.4
Larval Hindgut
 
 5
Larval Malpighian Tubules
 
 2.2
Larval Fat Body
 
 3.6
Larval Salivary Gland
 
 15.3
Larval Trachea
 
 9.6
Larval Carcass
 
 17.525
Adult Head
 
 4.3
Adult Eye
 
 8.15
Adult Brain
 
 1.2
Adult Thoracic-Abdominal Ganglion
 
 2.8
Adult Crop
 
 4.5
Adult Midgut
 
 3.8
Adult Hindgut
 
 2.3
Adult Malpighian Tubules
 
 3.1
Adult Fat Body
 
 16.8
Adult Salivary Gland
 
 30.1
Adult Heart
 
 2.55
Adult VirginFemale Spermatheca
 
 13.9
Adult InseminatedFemale Spermatheca
 
 16.5
Adult Ovary
 
 2.4
Adult Testis
 
 1.9
Adult Male Accessory Gland
 
 7.7
Adult Carcass
 
 11.4
Expression Level Scale
 Very high 
log, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 534.675
Larval Midgut
 
 3.4
Larval Hindgut
 
 5
Larval Malpighian Tubules
 
 2.2
Larval Fat Body
 
 3.6
Larval Salivary Gland
 
 15.3
Larval Trachea
 
 9.6
Larval Carcass
 
 17.525
Adult Head
 
 4.3
Adult Eye
 
 8.15
Adult Brain
 
 1.2
Adult Thoracic-Abdominal Ganglion
 
 2.8
Adult Crop
 
 4.5
Adult Midgut
 
 3.8
Adult Hindgut
 
 2.3
Adult Malpighian Tubules
 
 3.1
Adult Fat Body
 
 16.8
Adult Salivary Gland
 
 30.1
Adult Heart
 
 2.55
Adult VirginFemale Spermatheca
 
 13.9
Adult InseminatedFemale Spermatheca
 
 16.5
Adult Ovary
 
 2.4
Adult Testis
 
 1.9
Adult Male Accessory Gland
 
 7.7
Adult Carcass
 
 11.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 534.675
Larval Midgut
 
 3.4
Larval Hindgut
 
 5
Larval Malpighian Tubules
 
 2.2
Larval Fat Body
 
 3.6
Larval Salivary Gland
 
 15.3
Larval Trachea
 
 9.6
Larval Carcass
 
 17.525
Adult Head
 
 4.3
Adult Eye
 
 8.15
Adult Brain
 
 1.2
Adult Thoracic-Abdominal Ganglion
 
 2.8
Adult Crop
 
 4.5
Adult Midgut
 
 3.8
Adult Hindgut
 
 2.3
Adult Malpighian Tubules
 
 3.1
Adult Fat Body
 
 16.8
Adult Salivary Gland
 
 30.1
Adult Heart
 
 2.55
Adult VirginFemale Spermatheca
 
 13.9
Adult InseminatedFemale Spermatheca
 
 16.5
Adult Ovary
 
 2.4
Adult Testis
 
 1.9
Adult Male Accessory Gland
 
 7.7
Adult Carcass
 
 11.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 534.675
Larval Midgut
 
 3.4
Larval Hindgut
 
 5
Larval Malpighian Tubules
 
 2.2
Larval Fat Body
 
 3.6
Larval Salivary Gland
 
 15.3
Larval Trachea
 
 9.6
Larval Carcass
 
 17.525
Adult Head
 
 4.3
Adult Eye
 
 8.15
Adult Brain
 
 1.2
Adult Thoracic-Abdominal Ganglion
 
 2.8
Adult Crop
 
 4.5
Adult Midgut
 
 3.8
Adult Hindgut
 
 2.3
Adult Malpighian Tubules
 
 3.1
Adult Fat Body
 
 16.8
Adult Salivary Gland
 
 30.1
Adult Heart
 
 2.55
Adult VirginFemale Spermatheca
 
 13.9
Adult InseminatedFemale Spermatheca
 
 16.5
Adult Ovary
 
 2.4
Adult Testis
 
 1.9
Adult Male Accessory Gland
 
 7.7
Adult Carcass
 
 11.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 534.675
Larval Midgut
 
 3.4
Larval Hindgut
 
 5
Larval Malpighian Tubules
 
 2.2
Larval Fat Body
 
 3.6
Larval Salivary Gland
 
 15.3
Larval Trachea
 
 9.6
Larval Carcass
 
 17.525
Adult Head
 
 4.3
Adult Eye
 
 8.15
Adult Brain
 
 1.2
Adult Thoracic-Abdominal Ganglion
 
 2.8
Adult Crop
 
 4.5
Adult Midgut
 
 3.8
Adult Hindgut
 
 2.3
Adult Malpighian Tubules
 
 3.1
Adult Fat Body
 
 16.8
Adult Salivary Gland
 
 30.1
Adult Heart
 
 2.55
Adult VirginFemale Spermatheca
 
 13.9
Adult InseminatedFemale Spermatheca
 
 16.5
Adult Ovary
 
 2.4
Adult Testis
 
 1.9
Adult Male Accessory Gland
 
 7.7
Adult Carcass
 
 11.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 4.3
 
NA 
Eye
 
 8.15
 
NA 
Brain
 
 1.2
 
534.675 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 2.8
 
NA 
Crop
 
 4.5
 
3.4 
Midgut
 
 3.8
 
Hindgut
 
 2.3
 
2.2 
Malpighian Tubules
 
 3.1
 
3.6 
Fat Body
 
 no informative data
 
no informative data 
Salivary Gland
 
 no informative data
 
NA 
Heart
 
 2.55
 
9.6 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 no informative data
 
NA 
InseminatedFemale Spermatheca
 
 no informative data
 
NA 
Ovary
 
 2.4
 
NA 
Testis
 
 1.9
 
NA 
Male Accessory Gland
 
 7.7
 
no informative data 
Carcass
 
 no informative data

FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 3
central nervous system, larvae L3
 
 19
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 1
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 6
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 3
central nervous system, larvae L3
 
 19
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 1
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 6
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 3
central nervous system, larvae L3
 
 19
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 1
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 6
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 3
central nervous system, larvae L3
 
 19
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 1
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 6
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 1
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 3
central nervous system, larvae L3
 
 19
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 1
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 6
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 3
central nervous system, larvae L3
 
 19
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 1
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 6
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 3
central nervous system, larvae L3
 
 19
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 1
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 6
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 3
central nervous system, larvae L3
 
 19
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 1
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 6
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 
central nervous system, larvae L3
 
 
central nervous system, pupae P8
 
 
head, virgin 1-day female
 
 
head, virgin 4-day female
 
 
head, virgin 20-day female
 
 
head, mated 1-day female
 
 
head, mated 4-day female
 
 
head, mated 20-day female
 
 
head, mated 1-day male
 
 
head, mated 4-day male
 
 
head, mated 20-day male
 
 
salivary gland, larvae L3 wandering
 
 
salivary gland, white prepupae
 
 
digestive system, larvae L3 wandering
 
 
digestive system, 1-day adult
 
 
digestive system, 4-day adult
 
 
digestive system, 20-day adult
 
 
fat body, larvae L3 wandering
 
 
fat body, white prepupae
 
 
fat body, pupae P8
 
 
carcass, larvae L3 wandering
 
 
carcass, 1-day adult
 
 
carcass, 4-day adult
 
 
carcass, 20-day adult
 
 
ovary, virgin 4-day female
 
 
ovary, mated 4-day female
 
 
testis, mated 4-day male
 
 
accessory gland, mated 4-day male
 
 

hide modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)


   Styles
   Scales

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of extremely low expression. Peak expression observed within 00-12 hour embryonic stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 3
embryo 02-04hr
 
 28
embryo 04-06hr
 
 169
embryo 06-08hr
 
 255
embryo 08-10hr
 
 184
embryo 10-12hr
 
 59
embryo 12-14hr
 
 22
embryo 14-16hr
 
 6
embryo 16-18hr
 
 4
embryo 18-20hr
 
 4
embryo 20-22hr
 
 2
embryo 22-24hr
 
 3
larva L1
 
 1
larva L2
 
 1
larva L3 12hr old
 
 2
larva L3 puffstage 1-2
 
 5
larva L3 puffstage 3-6
 
 8
larva L3 puffstage 7-9
 
 10
white prepupae new
 
 11
white prepupae 12hr
 
 12
white prepupae 24hr
 
 5
pupae 2d postWPP
 
 2
pupae 3d postWPP
 
 0
pupae 4d postWPP
 
 0
adult male 01day
 
 0
adult male 05day
 
 0
adult male 30day
 
 0
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3
embryo 02-04hr
 (28)
embryo 04-06hr
 (169)
embryo 06-08hr
 (255)
embryo 08-10hr
 (184)
embryo 10-12hr
 (59)
embryo 12-14hr
 
 22
embryo 14-16hr
 
 6
embryo 16-18hr
 
 4
embryo 18-20hr
 
 4
embryo 20-22hr
 
 2
embryo 22-24hr
 
 3
larva L1
 
 1
larva L2
 
 1
larva L3 12hr old
 
 2
larva L3 puffstage 1-2
 
 5
larva L3 puffstage 3-6
 
 8
larva L3 puffstage 7-9
 
 10
white prepupae new
 
 11
white prepupae 12hr
 
 12
white prepupae 24hr
 
 5
pupae 2d postWPP
 
 2
pupae 3d postWPP
 
 0
pupae 4d postWPP
 
 0
adult male 01day
 
 0
adult male 05day
 
 0
adult male 30day
 
 0
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3
embryo 02-04hr
 
 28
embryo 04-06hr
 (169)
embryo 06-08hr
 (255)
embryo 08-10hr
 (184)
embryo 10-12hr
 
 59
embryo 12-14hr
 
 22
embryo 14-16hr
 
 6
embryo 16-18hr
 
 4
embryo 18-20hr
 
 4
embryo 20-22hr
 
 2
embryo 22-24hr
 
 3
larva L1
 
 1
larva L2
 
 1
larva L3 12hr old
 
 2
larva L3 puffstage 1-2
 
 5
larva L3 puffstage 3-6
 
 8
larva L3 puffstage 7-9
 
 10
white prepupae new
 
 11
white prepupae 12hr
 
 12
white prepupae 24hr
 
 5
pupae 2d postWPP
 
 2
pupae 3d postWPP
 
 0
pupae 4d postWPP
 
 0
adult male 01day
 
 0
adult male 05day
 
 0
adult male 30day
 
 0
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3
embryo 02-04hr
 
 28
embryo 04-06hr
 
 169
embryo 06-08hr
 
 255
embryo 08-10hr
 
 184
embryo 10-12hr
 
 59
embryo 12-14hr
 
 22
embryo 14-16hr
 
 6
embryo 16-18hr
 
 4
embryo 18-20hr
 
 4
embryo 20-22hr
 
 2
embryo 22-24hr
 
 3
larva L1
 
 1
larva L2
 
 1
larva L3 12hr old
 
 2
larva L3 puffstage 1-2
 
 5
larva L3 puffstage 3-6
 
 8
larva L3 puffstage 7-9
 
 10
white prepupae new
 
 11
white prepupae 12hr
 
 12
white prepupae 24hr
 
 5
pupae 2d postWPP
 
 2
pupae 3d postWPP
 
 0
pupae 4d postWPP
 
 0
adult male 01day
 
 0
adult male 05day
 
 0
adult male 30day
 
 0
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 3
embryo 02-04hr
 
 28
embryo 04-06hr
 
 169
embryo 06-08hr
 
 255
embryo 08-10hr
 
 184
embryo 10-12hr
 
 59
embryo 12-14hr
 
 22
embryo 14-16hr
 
 6
embryo 16-18hr
 
 4
embryo 18-20hr
 
 4
embryo 20-22hr
 
 2
embryo 22-24hr
 
 3
larva L1
 
 1
larva L2
 
 1
larva L3 12hr old
 
 2
larva L3 puffstage 1-2
 
 5
larva L3 puffstage 3-6
 
 8
larva L3 puffstage 7-9
 
 10
white prepupae new
 
 11
white prepupae 12hr
 
 12
white prepupae 24hr
 
 5
pupae 2d postWPP
 
 2
pupae 3d postWPP
 
 0
pupae 4d postWPP
 
 0
adult male 01day
 
 0
adult male 05day
 
 0
adult male 30day
 
 0
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3
embryo 02-04hr
 28
embryo 04-06hr
 (169)
embryo 06-08hr
 (255)
embryo 08-10hr
 (184)
embryo 10-12hr
 (59)
embryo 12-14hr
 
 22
embryo 14-16hr
 
 6
embryo 16-18hr
 
 4
embryo 18-20hr
 
 4
embryo 20-22hr
 
 2
embryo 22-24hr
 
 3
larva L1
 
 1
larva L2
 
 1
larva L3 12hr old
 
 2
larva L3 puffstage 1-2
 
 5
larva L3 puffstage 3-6
 
 8
larva L3 puffstage 7-9
 
 10
white prepupae new
 
 11
white prepupae 12hr
 
 12
white prepupae 24hr
 
 5
pupae 2d postWPP
 
 2
pupae 3d postWPP
 
 0
pupae 4d postWPP
 
 0
adult male 01day
 
 0
adult male 05day
 
 0
adult male 30day
 
 0
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3
embryo 02-04hr
 
 28
embryo 04-06hr
 (169)
embryo 06-08hr
 (255)
embryo 08-10hr
 (184)
embryo 10-12hr
 
 59
embryo 12-14hr
 
 22
embryo 14-16hr
 
 6
embryo 16-18hr
 
 4
embryo 18-20hr
 
 4
embryo 20-22hr
 
 2
embryo 22-24hr
 
 3
larva L1
 
 1
larva L2
 
 1
larva L3 12hr old
 
 2
larva L3 puffstage 1-2
 
 5
larva L3 puffstage 3-6
 
 8
larva L3 puffstage 7-9
 
 10
white prepupae new
 
 11
white prepupae 12hr
 
 12
white prepupae 24hr
 
 5
pupae 2d postWPP
 
 2
pupae 3d postWPP
 
 0
pupae 4d postWPP
 
 0
adult male 01day
 
 0
adult male 05day
 
 0
adult male 30day
 
 0
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3
embryo 02-04hr
 
 28
embryo 04-06hr
 
 169
embryo 06-08hr
 
 255
embryo 08-10hr
 
 184
embryo 10-12hr
 
 59
embryo 12-14hr
 
 22
embryo 14-16hr
 
 6
embryo 16-18hr
 
 4
embryo 18-20hr
 
 4
embryo 20-22hr
 
 2
embryo 22-24hr
 
 3
larva L1
 
 1
larva L2
 
 1
larva L3 12hr old
 
 2
larva L3 puffstage 1-2
 
 5
larva L3 puffstage 3-6
 
 8
larva L3 puffstage 7-9
 
 10
white prepupae new
 
 11
white prepupae 12hr
 
 12
white prepupae 24hr
 
 5
pupae 2d postWPP
 
 2
pupae 3d postWPP
 
 0
pupae 4d postWPP
 
 0
adult male 01day
 
 0
adult male 05day
 
 0
adult male 30day
 
 0
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

modENCODE Temporal Expression Data (Graveley et al., 2011)
hide modENCODE Cell Lines RNA-Seq

modENCODE Cell Line Expression Data

(modENCODE_mRNA-Seq_cell.A)

(modENCODE_mRNA-Seq_cell.B)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 1
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 3
wing disc ML-DmD16-c3
 
 2
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 1
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 3
wing disc ML-DmD16-c3
 
 2
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 1
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 3
wing disc ML-DmD16-c3
 
 2
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 1
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 3
wing disc ML-DmD16-c3
 
 2
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 1
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 3
wing disc ML-DmD16-c3
 
 2
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
log, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 1
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 3
wing disc ML-DmD16-c3
 
 2
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 1
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 3
wing disc ML-DmD16-c3
 
 2
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 1
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 3
wing disc ML-DmD16-c3
 
 2
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Cell Line   Expression Level
Schneider line 2 S2R+
 
 
Schneider line 2 Sg4
 
 
embryonic 1182-4H
 
 
embryonic GM2
 
 
embryonic Kc167
 
 
embryonic S1
 
 
embryonic S3
 
 
leg disc CME L1
 
 
wing disc CME-W2
 
 
wing disc ML-DmD8
 
 
wing disc ML-DmD9
 
 
wing disc ML-DmD16-c3
 
 
wing disc ML-DmD21
 
 
wing disc ML-DmD32
 
 
haltere disc ML-DmD17-c3
 
 
eye-antennal disc ML-DmD11
 
 
antennal disc ML-DmD20-c5
 
 
mixed discs ML-DmD4-c1
 
 
CNS ML-DmBG1-c1
 
 
CNS ML-DmBG2-c2
 
 
tumorous blood cells mbn2
 
 
ovary fGS/OSS
 
 
ovary OSC
 
 
ovary OSS
 
 

hide modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 3
cold shock, 4-day adult
 
 1
heat shock, 4-day adult
 
 1
Cadmium 50 mM 6 hrs, larvae L3
 
 2
Cadmium 50 mM 12 hrs, larvae L3
 
 4
Cadmium 50 mM 48 hrs, 4-day adult
 
 1
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 6
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 1
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 3
Ethanol 10% 3 hrs, larvae L3
 
 1
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 0
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 2
Rotenone 8 μg 12 hrs, larvae L3
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 3
cold shock, 4-day adult
 
 1
heat shock, 4-day adult
 
 1
Cadmium 50 mM 6 hrs, larvae L3
 
 2
Cadmium 50 mM 12 hrs, larvae L3
 
 4
Cadmium 50 mM 48 hrs, 4-day adult
 
 1
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 6
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 1
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 3
Ethanol 10% 3 hrs, larvae L3
 
 1
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 0
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 2
Rotenone 8 μg 12 hrs, larvae L3
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 3
cold shock, 4-day adult
 
 1
heat shock, 4-day adult
 
 1
Cadmium 50 mM 6 hrs, larvae L3
 
 2
Cadmium 50 mM 12 hrs, larvae L3
 
 4
Cadmium 50 mM 48 hrs, 4-day adult
 
 1
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 6
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 1
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 3
Ethanol 10% 3 hrs, larvae L3
 
 1
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 0
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 2
Rotenone 8 μg 12 hrs, larvae L3
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 3
cold shock, 4-day adult
 
 1
heat shock, 4-day adult
 
 1
Cadmium 50 mM 6 hrs, larvae L3
 
 2
Cadmium 50 mM 12 hrs, larvae L3
 
 4
Cadmium 50 mM 48 hrs, 4-day adult
 
 1
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 6
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 1
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 3
Ethanol 10% 3 hrs, larvae L3
 
 1
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 0
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 2
Rotenone 8 μg 12 hrs, larvae L3
 
 1
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 3
cold shock, 4-day adult
 
 1
heat shock, 4-day adult
 
 1
Cadmium 50 mM 6 hrs, larvae L3
 
 2
Cadmium 50 mM 12 hrs, larvae L3
 
 4
Cadmium 50 mM 48 hrs, 4-day adult
 
 1
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 6
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 1
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 3
Ethanol 10% 3 hrs, larvae L3
 
 1
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 0
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 2
Rotenone 8 μg 12 hrs, larvae L3
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
log, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 3
cold shock, 4-day adult
 
 1
heat shock, 4-day adult
 
 1
Cadmium 50 mM 6 hrs, larvae L3
 
 2
Cadmium 50 mM 12 hrs, larvae L3
 
 4
Cadmium 50 mM 48 hrs, 4-day adult
 
 1
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 6
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 1
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 3
Ethanol 10% 3 hrs, larvae L3
 
 1
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 0
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 2
Rotenone 8 μg 12 hrs, larvae L3
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 3
cold shock, 4-day adult
 
 1
heat shock, 4-day adult
 
 1
Cadmium 50 mM 6 hrs, larvae L3
 
 2
Cadmium 50 mM 12 hrs, larvae L3
 
 4
Cadmium 50 mM 48 hrs, 4-day adult
 
 1
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 6
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 1
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 3
Ethanol 10% 3 hrs, larvae L3
 
 1
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 0
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 2
Rotenone 8 μg 12 hrs, larvae L3
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 3
cold shock, 4-day adult
 
 1
heat shock, 4-day adult
 
 1
Cadmium 50 mM 6 hrs, larvae L3
 
 2
Cadmium 50 mM 12 hrs, larvae L3
 
 4
Cadmium 50 mM 48 hrs, 4-day adult
 
 1
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 6
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 1
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 3
Ethanol 10% 3 hrs, larvae L3
 
 1
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 0
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 2
Rotenone 8 μg 12 hrs, larvae L3
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Treatment   Expression Level
extended cold, 4-day adult
 
 
cold shock, 4-day adult
 
 
heat shock, 4-day adult
 
 
Cadmium 50 mM 6 hrs, larvae L3
 
 
Cadmium 50 mM 12 hrs, larvae L3
 
 
Cadmium 50 mM 48 hrs, 4-day adult
 
 
Cadmium 100 mM 48 hrs, 4-day adult
 
 
Copper 0.5 mM 12 hrs, larvae L3
 
 
Copper 15 mM 48 hrs, 4-day adult
 
 
Zinc 5 mM 12 hrs, larvae L3
 
 
Zinc 4.5 mM 48 hrs, 4-day adult
 
 
Ethanol 2.5% 3 hrs, larvae L3
 
 
Ethanol 5% 3 hrs, larvae L3
 
 
Ethanol 10% 3 hrs, larvae L3
 
 
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 
Paraquat 5 mM 48 hrs, 4-day adult
 
 
Paraquat 10 mM 48 hrs, 4-day adult
 
 
Rotenone 2 μg 12 hrs, larvae L3
 
 
Rotenone 8 μg 12 hrs, larvae L3
 
 

hide Expression Clusters
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
chordotonal organ precursor cell & ventral thoracic disc, with Scer\GAL4sca-109-68
dorsal row & sensory mother cell, with Scer\GAL4ap-md544
scutum & macrochaeta, with Scer\GAL4h-1J3
scutum & microchaeta, with Scer\GAL432B
hide Classical Alleles ( 3 )
For All Classical Alleles Show

Allele of E(spl)mγ-HLHClassMutagenStocksKnown lesion
E(spl)mγ-HLHA5891C0 --
E(spl)mγ-HLHG6121T0 Yes
E(spl)mγ-HLHMI07190
0 --
hide Alleles Carried on Transgenic Constructs ( 11 )
For All Alleles Carried on Transgenic Constructs Show

Allele of E(spl)mγ-HLHClassMutagenStocksKnown lesion
E(spl)mγ-HLHGD44591 Yes
E(spl)mγ-HLHJF020001 Yes
E(spl)mγ-HLH+t130 Yes
E(spl)mγ-HLHAct5C.PG0 Yes
E(spl)mγ-HLHKNEQ.Scer\UAS.T:Hsim\VP160 Yes
E(spl)mγ-HLHKNEQ.Scer\UAS0 Yes
E(spl)mγ-HLHNIG.8333R0 Yes
E(spl)mγ-HLHScer\UAS.cBa0 Yes
E(spl)mγ-HLHScer\UAS.cLa0 Yes
E(spl)mγ-HLHScer\UAS.T:Hsim\VP160 Yes
E(spl)mγ-HLHT:Avic\GFP0 Yes
hide Aneuploid Aberrations
Disrupted in
Duplicated in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
miscellaneous insertions
hide Gene Ontology: Function, Process & Cellular Component ( 13 unique terms )
hide Terms Based on Experimental Evidence ( 5 terms )
Molecular Function
CV term
References
inferred from genetic interaction with da
inferred from genetic interaction with sc
Biological Process
CV term
References
Cellular Component ( 0 terms)
hide Terms Based on Predictions or Assertions ( 9 terms )
Molecular Function
CV term
References
inferred from sequence or structural similarity with mouse Hes1
non-traceable author statement
Biological Process
CV term
References
inferred from sequence or structural similarity with mouse Hes1
traceable author statement
Cellular Component
CV term
References
inferred by curator from GO:0003677
non-traceable author statement
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
protein-protein
Interacting group
Assay
References
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
pull down, autoradiography
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
E(spl)mγ-HLH allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
hide OrthoDB Orthologs (30) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
Insect inclusive ortholog search
Arthropod inclusive ortholog search
Metazoa inclusive ortholog search
No orthologs identified
hideOrthologs in Drosophila Species (EOG6Z0BS4)
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly 
 
 
Drosophila simulans
 
Y
 
Drosophila sechellia
 
Y
 
Drosophila erecta
 
Y
 
Drosophila yakuba
 
Y
 
Drosophila ananassae
 
Y
 
Drosophila pseudoobscura pseudoobscura
 
Y
 
Drosophila persimilis
 
Y
 
Drosophila willistoni
 
Y
 
Drosophila virilis
 
Y
 
Drosophila mojavensis
 
Y
 
Drosophila grimshawi
 
Y
 
hideOrthologs in non-Drosophila Dipterans (EOG6Z8Z5V)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Aedes aegypti
Yellow fever mosquito 
Y
Anopheles gambiae
Malaria mosquito 
Y
Culex quinquefasciatus
Southern house mosquito 
Y
hideOrthologs in non-Dipteran Insects (EOG6QNKSR)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Apis mellifera
Western honey bee 
Amel\LOC409822
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH21572
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP15330
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO14590
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL13669
Y
Linepithema humile
Argentine ant 
Lhum\LH11777
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB12775
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV15880
Y
Acyrthosiphon pisum
Pea aphid 
Y
Bombyx mori
Silkmoth 
Y
Pediculus humanus
Human body louse 
Y
Tribolium castaneum
Red flour beetle 
Y
hideOrthologs in non-Insect Arthropods (EOG6WH73C)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
hide Human Orthologs (0)
Gene
OMIM
HGNC
hideAAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism
Gene
Drosophila simulans
Drosophila sechellia
Drosophila erecta
Drosophila yakuba
Drosophila ananassae
Drosophila pseudoobscura pseudoobscura
Drosophila persimilis
Drosophila willistoni
Drosophila virilis
Drosophila mojavensis
Drosophila grimshawi
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 2 )
Bloomington
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 11 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
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cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
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Source for database identity of
Source for identity of: E(spl)mγ-HLH HLHmγ
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The distinct expression patterns of genes of the E(spl) complex in imaginal tissues depend to a significant degree on the capacity of their transcriptional cis-regulatory apparatus to respond selectively to direct proneural and Su(H)-mediated activation, often in a subset of the territories and cells in which proneural and Su(H) regulation is occurring. The m4 and HLHmγ enhancers are distinctly similar though the genes are expressed in dissimilar patterns in the wing disc. The HLHmγ enhancer shows a selective response to the N signalling pathway.
N-inducible expression of HLHmδ and HLHmγ both in cultured cells and in vivo is dependent on functional Su(H) protein.
The bHLH domains of the gene products encoded by the E(spl)-C and AS-C differ in their ability to form homo- and/or heterodimers. The interactions established through the bHLH link the products of the two complexes in a single interaction network which may function to ensure that a given cell retains the capacity to choose between epidermoblast and neuroblast fates until the cell becomes definitively determined.
Clones mutant for E(spl)-C bHLH-encoding genes or for gro display bristle hyperplasia. The E(spl)-C genes participate in the N signalling pathway. E(spl)-C mutants are epistatic over a gain of function mutant of N and ac-sc mutants are epistatic over E(spl)-C mutants.
The expression pattern of proneural genes of the AS-C and neurogenic genes of the E(spl)-C are examined in the procephlon and a map of the cells is constructed.
Almost all E(spl)-complex bHLH proteins can homo-hetero-dimerise, but not with the same efficiency. All E(spl)-complex bHLH proteins interact with gro protein via their C-terminal domain. E(spl)-complex bHLH proteins interact with proneural proteins, with members of the E(spl) family exhibiting distinct preferences for different proneural proteins.
The bristle loss phenotype of H mutants can be suppressed by deleting components of the E(spl)-complex. The degree of suppression depends on both the number and identity of E(spl)-complex transcription units removed.
Gel retardation experiments demonstrate the 5' regulatory region contains putative in vitro binding sites for Su(H).
Arrangement and sequence of E(spl)-complex genes in D.melanogaster and D.hydei revealed that the E(spl)-gene, and the structure of complex are highly conserved, suggesting that each individual gene, as well as the organization of the complex, is of functional importance.
E(spl) region gene encoding HLH protein identified by low stringency hybridization to previously defined HLHm5 and HLHm7 probes. On basis of cross-hybridization and sequence data the E(spl) HLH genes can be placed into 3 groups. The first includes E(spl) and HLHm5, the second includes HLHm7, HLHm3, HLHmA and HLHmB and the last includes HLHmC.
Direction of transcription of HLHmγ reported is at odds with that reported in Delidakis et al., PNAS 89:8731--8735.
Molecular analysis established identity of HLHmβ, HLHmγ and HLHmδ with HLHmA, HLHmB and HLHmC of Delidakis et al., respectively. HLHm3, HLHmβ, HLHmγ and HLHmδ encode helix-loop-helix proteins, bringing the total of such proteins in the E(spl) complex to seven.
Genes of the E(spl) complex act as a functional unit composed of redundant genes which can partially substitute for each other. Eight E(spl)-region genes are required for the development of neurectodermal cells: HLHmδ, HLHmβ, HLHmγ, HLHm3, HLHm5, HLHm7, E(spl) and gro. The E(spl)-region gene m4 may also play a role in this process.
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Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
REDfly - A database of transcriptional regulatory elements.
hide Synonyms & Secondary IDs ( 29 )
Reported As
Symbol Synonym
anon-EST:Liang-1.49
 
E(Spl) HLH-m gamma
e(spl)mgamma
E(spl)mγ-HLH
 
HLHmB
 
Name Synonym
Enhancer of split mgamma
Enhancer of split mγ, helix-loop-helix
 
Enhancer of split region transcript HLHmB
 
split locus enhancer protein mB
Secondary FlyBase IDs
hide References ( 135 )
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hide Recent research papers ( 14 )
Housden et al., 2013, PLoS Genet. 9(1): e1003162
Transcriptional Dynamics Elicited by a Short Pulse of Notch Activation Involves Feed-Forward Regulation by E(spl)/Hes Genes. [FBrf0220474]
Berger et al., 2012, Cell Rep. 2(2): 407--418
FACS Purification and Transcriptome Analysis of Drosophila Neural Stem Cells Reveals a Role for Klumpfuss in Self-Renewal. [FBrf0219320]
Engel et al., 2012, Toxicol. In Vitro 26(3): 485--492
The effects of methylmercury on Notch signaling during embryonic neural development in Drosophila melanogaster. [FBrf0217650]
Rebeiz et al., 2012, Dev. Biol. 362(2): 282--294
Ancestral and conserved cis-regulatory architectures in developmental control genes. [FBrf0217764]
Weng et al., 2012, Dev. Neurobiol. 72(11): 1376--1390
Changes in Notch signaling coordinates maintenance and differentiation of the Drosophila larval optic lobe neuroepithelia. [FBrf0219799]
Zacharioudaki et al., 2012, Development 139(7): 1258--1269
bHLH-O proteins are crucial for Drosophila neuroblast self-renewal and mediate Notch-induced overproliferation. [FBrf0217605]
Baker et al., 2011, BMC Evol. Biol. 11: 354
The Enhancer of split complex arose prior to the diversification of schizophoran flies and is strongly conserved between Drosophila and stalk-eyed flies (Diopsidae). [FBrf0217296]
Barry et al., 2011, Development 138(9): 1759--1769
The Drosophila STUbL protein Degringolade limits HES functions during embryogenesis. [FBrf0213458]
Cave et al., 2011, Mol. Cell. Biol. 31(1): 22--29
Differential Regulation of Transcription through Distinct Suppressor of Hairless DNA Binding Site Architectures during Notch Signaling in Proneural Clusters. [FBrf0212524]
Duan et al., 2011, EMBO J. 30(15): 3120--3133
Insensitive is a corepressor for Suppressor of Hairless and regulates Notch signalling during neural development. [FBrf0214638]
Johnson et al., 2011, Development 138(21): 4627--4638
JAK/Stat signaling regulates heart precursor diversification in Drosophila. [FBrf0216404]
Michaut et al., 2011, Dev. Growth Differ. 53(9): 982--993
Analyzing the function of a hox gene: An evolutionary approach. [FBrf0216990]
Ouyang et al., 2011, Development 138(11): 2185--2196
Dronc caspase exerts a non-apoptotic function to restrain phospho-Numb-induced ectopic neuroblast formation in Drosophila. [FBrf0213702]
Toku et al., 2011, Comput. Biol. Chem. 35(5): 282--292
Reconstruction and crosstalk of protein-protein interaction networks of Wnt and Hedgehog signaling in Drosophila melanogaster. [FBrf0216393]
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All reviews listed in FlyBase were published before 2011