A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\mago

General Information
SymbolDmel\magoSpeciesD. melanogaster
Namemago nashiAnnotation symbolCG9401
Feature typeprotein_coding_geneFlyBase IDFBgn0002736
Gene Model StatusCurrent Stock availability 4 publicly available
Also Known AsMGN, MAGOH
Genomic Location
Chromosome (arm)2RRecombination map
Cytogenetic map57C2-57C2Sequence location2R:17,016,084..17,017,245 [+]

Genomic Maps

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modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene mago nashi is referred to in FlyBase by the symbol Dmel\mago (CG9401, FBgn0002736). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process: protein localization; epidermal growth factor receptor signaling pathway; oocyte microtubule cytoskeleton polarization; regulation of pole plasm oskar mRNA localization; RNA splicing. 23 alleles are reported. The phenotypes of these alleles are annotated with: posterior aeropyle; egg; follicle cell; mesothoracic tergum; micropyle; egg operculum; oocyte nucleus; dorsal appendage. It has one annotated transcript and one annotated polypeptide. Protein features are: Mago nashi protein. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval central nervous system, larval salivary gland, adult female reproductive system. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, adult salivary gland, larval trachea, adult male accessory gland, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1636919_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of mago. Gene sequence location is 2R:17016084..17017245.

External Summaries
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
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FB2012_01
Sequence features
Controlled Vocabulary Terms
FB2011_10
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
57C2-57C2  
Limits computationally determined from genome sequence between P{PZ}king-tubby02821&P{lacW}Xbp1k13803 and P{EP}CG4266EP2258  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
57B20-57C2  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\mago for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0071638 FBtr0071637 FBtr0071569 FBtr0071636 FBpp0071561 FBpp0071560 FBpp0071497 FBpp0071559 FBti0044500 FBti0125339_2 FBti0035362 FBti0128141 FBti0105126 FBti0028546 FBti0125339_1 FBti0024483 FBti0125340_2 FBti0125340_1
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0071569
  1104
  147
Additional Transcript Data & Comments
Reported size (kB)
1.1, 0.7 (northern blot)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0071497  
17.3  
147  
6.01  
Additional Polypeptide Data & Comments
Reported size (kDa)
147 (aa); 17 (kD predicted)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Mago nashi protein (IPR004023)
PDB - Protein Data Bank. An information portal to biological macromolecular structures
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
mago transcripts are expressed throughout development and are present in both adult males and females. They are uniformly expressed throughout the nurse cell-oocyte complex during early oogenesis, are abundant in nurse cells at stage 10, and appear to be uniformly distributed throughout the embryo by the time of egg deposition.
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
epitope tag
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
mago protein is localized to the nuclei of nurse cells in the developing egg chamber. mago also colocalizes with btz in a dense cloud around the ring canals, and at the posterior pole of stage 9 oocytes.
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view CG4050-RA mago-RA Magi-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0002736


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0002736
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0002736 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 9338
embryo 02-04hr
 
 14120
embryo 04-06hr
 
 19444
embryo 06-08hr
 
 13788
embryo 08-10hr
 
 13237
embryo 10-12hr
 
 13842
embryo 12-14hr
 
 7885
embryo 14-16hr
 
 6294
embryo 16-18hr
 
 4703
embryo 18-20hr
 
 2575
embryo 20-22hr
 
 3676
embryo 22-24hr
 
 3659
larva L1
 
 3165
larva L2
 
 4423
larva L3 12hr old
 
 3246
larva L3 puffstage 1-2
 
 2623
larva L3 puffstage 3-6
 
 2948
larva L3 puffstage 7-9
 
 4126
white prepupae new
 
 3651
white prepupae 12hr
 
 3416
white prepupae 24hr
 
 4197
pupae 2d postWPP
 
 2076
pupae 3d postWPP
 
 1514
pupae 4d postWPP
 
 1199
adult male 01day
 
 1245
adult male 05day
 
 1361
adult male 30day
 
 1250
adult female 01day
 
 3738
adult female 05day
 
 5938
adult female 30day
 
 6088
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (9338)
embryo 02-04hr
 (14120)
embryo 04-06hr
 (19444)
embryo 06-08hr
 (13788)
embryo 08-10hr
 (13237)
embryo 10-12hr
 (13842)
embryo 12-14hr
 (7885)
embryo 14-16hr
 (6294)
embryo 16-18hr
 (4703)
embryo 18-20hr
 (2575)
embryo 20-22hr
 (3676)
embryo 22-24hr
 (3659)
larva L1
 (3165)
larva L2
 (4423)
larva L3 12hr old
 (3246)
larva L3 puffstage 1-2
 (2623)
larva L3 puffstage 3-6
 (2948)
larva L3 puffstage 7-9
 (4126)
white prepupae new
 (3651)
white prepupae 12hr
 (3416)
white prepupae 24hr
 (4197)
pupae 2d postWPP
 (2076)
pupae 3d postWPP
 (1514)
pupae 4d postWPP
 (1199)
adult male 01day
 (1245)
adult male 05day
 (1361)
adult male 30day
 (1250)
adult female 01day
 (3738)
adult female 05day
 (5938)
adult female 30day
 (6088)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (9338)
embryo 02-04hr
 (14120)
embryo 04-06hr
 (19444)
embryo 06-08hr
 (13788)
embryo 08-10hr
 (13237)
embryo 10-12hr
 (13842)
embryo 12-14hr
 (7885)
embryo 14-16hr
 (6294)
embryo 16-18hr
 (4703)
embryo 18-20hr
 (2575)
embryo 20-22hr
 (3676)
embryo 22-24hr
 (3659)
larva L1
 (3165)
larva L2
 (4423)
larva L3 12hr old
 (3246)
larva L3 puffstage 1-2
 (2623)
larva L3 puffstage 3-6
 (2948)
larva L3 puffstage 7-9
 (4126)
white prepupae new
 (3651)
white prepupae 12hr
 (3416)
white prepupae 24hr
 (4197)
pupae 2d postWPP
 (2076)
pupae 3d postWPP
 (1514)
pupae 4d postWPP
 
 1199
adult male 01day
 
 1245
adult male 05day
 
 1361
adult male 30day
 
 1250
adult female 01day
 (3738)
adult female 05day
 (5938)
adult female 30day
 (6088)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 9338
embryo 02-04hr
 (14120)
embryo 04-06hr
 (19444)
embryo 06-08hr
 (13788)
embryo 08-10hr
 (13237)
embryo 10-12hr
 (13842)
embryo 12-14hr
 
 7885
embryo 14-16hr
 
 6294
embryo 16-18hr
 
 4703
embryo 18-20hr
 
 2575
embryo 20-22hr
 
 3676
embryo 22-24hr
 
 3659
larva L1
 
 3165
larva L2
 
 4423
larva L3 12hr old
 
 3246
larva L3 puffstage 1-2
 
 2623
larva L3 puffstage 3-6
 
 2948
larva L3 puffstage 7-9
 
 4126
white prepupae new
 
 3651
white prepupae 12hr
 
 3416
white prepupae 24hr
 
 4197
pupae 2d postWPP
 
 2076
pupae 3d postWPP
 
 1514
pupae 4d postWPP
 
 1199
adult male 01day
 
 1245
adult male 05day
 
 1361
adult male 30day
 
 1250
adult female 01day
 
 3738
adult female 05day
 
 5938
adult female 30day
 
 6088
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 9338
embryo 02-04hr
 
 14120
embryo 04-06hr
 
 19444
embryo 06-08hr
 
 13788
embryo 08-10hr
 
 13237
embryo 10-12hr
 
 13842
embryo 12-14hr
 
 7885
embryo 14-16hr
 
 6294
embryo 16-18hr
 
 4703
embryo 18-20hr
 
 2575
embryo 20-22hr
 
 3676
embryo 22-24hr
 
 3659
larva L1
 
 3165
larva L2
 
 4423
larva L3 12hr old
 
 3246
larva L3 puffstage 1-2
 
 2623
larva L3 puffstage 3-6
 
 2948
larva L3 puffstage 7-9
 
 4126
white prepupae new
 
 3651
white prepupae 12hr
 
 3416
white prepupae 24hr
 
 4197
pupae 2d postWPP
 
 2076
pupae 3d postWPP
 
 1514
pupae 4d postWPP
 
 1199
adult male 01day
 
 1245
adult male 05day
 
 1361
adult male 30day
 
 1250
adult female 01day
 
 3738
adult female 05day
 
 5938
adult female 30day
 
 6088
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0002736 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 9338
embryo 02-04hr
 
 14120
embryo 04-06hr
 
 19444
embryo 06-08hr
 
 13788
embryo 08-10hr
 
 13237
embryo 10-12hr
 
 13842
embryo 12-14hr
 
 7885
embryo 14-16hr
 
 6294
embryo 16-18hr
 
 4703
embryo 18-20hr
 
 2575
embryo 20-22hr
 
 3676
embryo 22-24hr
 
 3659
larva L1
 
 3165
larva L2
 
 4423
larva L3 12hr old
 
 3246
larva L3 puffstage 1-2
 
 2623
larva L3 puffstage 3-6
 
 2948
larva L3 puffstage 7-9
 
 4126
white prepupae new
 
 3651
white prepupae 12hr
 
 3416
white prepupae 24hr
 
 4197
pupae 2d postWPP
 
 2076
pupae 3d postWPP
 
 1514
pupae 4d postWPP
 
 1199
adult male 01day
 
 1245
adult male 05day
 
 1361
adult male 30day
 
 1250
adult female 01day
 
 3738
adult female 05day
 
 5938
adult female 30day
 
 6088
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (9338)
embryo 02-04hr
 (14120)
embryo 04-06hr
 (19444)
embryo 06-08hr
 (13788)
embryo 08-10hr
 (13237)
embryo 10-12hr
 (13842)
embryo 12-14hr
 (7885)
embryo 14-16hr
 (6294)
embryo 16-18hr
 (4703)
embryo 18-20hr
 (2575)
embryo 20-22hr
 (3676)
embryo 22-24hr
 (3659)
larva L1
 (3165)
larva L2
 (4423)
larva L3 12hr old
 (3246)
larva L3 puffstage 1-2
 (2623)
larva L3 puffstage 3-6
 (2948)
larva L3 puffstage 7-9
 (4126)
white prepupae new
 (3651)
white prepupae 12hr
 (3416)
white prepupae 24hr
 (4197)
pupae 2d postWPP
 (2076)
pupae 3d postWPP
 (1514)
pupae 4d postWPP
 (1199)
adult male 01day
 (1245)
adult male 05day
 (1361)
adult male 30day
 (1250)
adult female 01day
 (3738)
adult female 05day
 (5938)
adult female 30day
 (6088)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (9338)
embryo 02-04hr
 (14120)
embryo 04-06hr
 (19444)
embryo 06-08hr
 (13788)
embryo 08-10hr
 (13237)
embryo 10-12hr
 (13842)
embryo 12-14hr
 (7885)
embryo 14-16hr
 (6294)
embryo 16-18hr
 (4703)
embryo 18-20hr
 (2575)
embryo 20-22hr
 (3676)
embryo 22-24hr
 (3659)
larva L1
 (3165)
larva L2
 (4423)
larva L3 12hr old
 (3246)
larva L3 puffstage 1-2
 (2623)
larva L3 puffstage 3-6
 (2948)
larva L3 puffstage 7-9
 (4126)
white prepupae new
 (3651)
white prepupae 12hr
 (3416)
white prepupae 24hr
 (4197)
pupae 2d postWPP
 2076
pupae 3d postWPP
 1514
pupae 4d postWPP
 
 1199
adult male 01day
 
 1245
adult male 05day
 
 1361
adult male 30day
 
 1250
adult female 01day
 (3738)
adult female 05day
 (5938)
adult female 30day
 (6088)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 9338
embryo 02-04hr
 14120
embryo 04-06hr
 19444
embryo 06-08hr
 13788
embryo 08-10hr
 13237
embryo 10-12hr
 13842
embryo 12-14hr
 
 7885
embryo 14-16hr
 
 6294
embryo 16-18hr
 
 4703
embryo 18-20hr
 
 2575
embryo 20-22hr
 
 3676
embryo 22-24hr
 
 3659
larva L1
 
 3165
larva L2
 
 4423
larva L3 12hr old
 
 3246
larva L3 puffstage 1-2
 
 2623
larva L3 puffstage 3-6
 
 2948
larva L3 puffstage 7-9
 
 4126
white prepupae new
 
 3651
white prepupae 12hr
 
 3416
white prepupae 24hr
 
 4197
pupae 2d postWPP
 
 2076
pupae 3d postWPP
 
 1514
pupae 4d postWPP
 
 1199
adult male 01day
 
 1245
adult male 05day
 
 1361
adult male 30day
 
 1250
adult female 01day
 
 3738
adult female 05day
 
 5938
adult female 30day
 
 6088
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 9338
embryo 02-04hr
 
 14120
embryo 04-06hr
 
 19444
embryo 06-08hr
 
 13788
embryo 08-10hr
 
 13237
embryo 10-12hr
 
 13842
embryo 12-14hr
 
 7885
embryo 14-16hr
 
 6294
embryo 16-18hr
 
 4703
embryo 18-20hr
 
 2575
embryo 20-22hr
 
 3676
embryo 22-24hr
 
 3659
larva L1
 
 3165
larva L2
 
 4423
larva L3 12hr old
 
 3246
larva L3 puffstage 1-2
 
 2623
larva L3 puffstage 3-6
 
 2948
larva L3 puffstage 7-9
 
 4126
white prepupae new
 
 3651
white prepupae 12hr
 
 3416
white prepupae 24hr
 
 4197
pupae 2d postWPP
 
 2076
pupae 3d postWPP
 
 1514
pupae 4d postWPP
 
 1199
adult male 01day
 
 1245
adult male 05day
 
 1361
adult male 30day
 
 1250
adult female 01day
 
 3738
adult female 05day
 
 5938
adult female 30day
 
 6088
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0002736


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0002736
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval central nervous system, larval salivary gland, adult female reproductive system. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, adult salivary gland, larval trachea, adult male accessory gland, larval/adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0002736 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 1114.15
Larval Midgut
 
 188.2
Larval Hindgut
 
 278.9
Larval Malpighian Tubules
 
 263.1
Larval Fat Body
 
 258.4
Larval Salivary Gland
 
 635.7
Larval Trachea
 
 340.35
Larval Carcass
 
 337.175
Adult Head
 
 140.6
Adult Eye
 
 100.325
Adult Brain
 
 193.1
Adult Thoracic-Abdominal Ganglion
 
 166.3
Adult Crop
 
 240.2
Adult Midgut
 
 164.3
Adult Hindgut
 
 160.8
Adult Malpighian Tubules
 
 175.4
Adult Fat Body
 
 323.2
Adult Salivary Gland
 
 228.5
Adult Heart
 
 132.425
Adult VirginFemale Spermatheca
 
 616.7
Adult InseminatedFemale Spermatheca
 
 520.2
Adult Ovary
 
 760.8
Adult Testis
 
 80
Adult Male Accessory Gland
 
 194.6
Adult Carcass
 
 150.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (1114.15)
Larval Midgut
 
 188.2
Larval Hindgut
 
 278.9
Larval Malpighian Tubules
 
 263.1
Larval Fat Body
 
 258.4
Larval Salivary Gland
 (635.7)
Larval Trachea
 
 340.35
Larval Carcass
 
 337.175
Adult Head
 
 140.6
Adult Eye
 
 100.325
Adult Brain
 
 193.1
Adult Thoracic-Abdominal Ganglion
 
 166.3
Adult Crop
 
 240.2
Adult Midgut
 
 164.3
Adult Hindgut
 
 160.8
Adult Malpighian Tubules
 
 175.4
Adult Fat Body
 
 323.2
Adult Salivary Gland
 
 228.5
Adult Heart
 
 132.425
Adult VirginFemale Spermatheca
 (616.7)
Adult InseminatedFemale Spermatheca
 520.2
Adult Ovary
 (760.8)
Adult Testis
 
 80
Adult Male Accessory Gland
 
 194.6
Adult Carcass
 
 150.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 (1114.15)
Larval Midgut
 
 188.2
Larval Hindgut
 
 278.9
Larval Malpighian Tubules
 
 263.1
Larval Fat Body
 
 258.4
Larval Salivary Gland
 
 635.7
Larval Trachea
 
 340.35
Larval Carcass
 
 337.175
Adult Head
 
 140.6
Adult Eye
 
 100.325
Adult Brain
 
 193.1
Adult Thoracic-Abdominal Ganglion
 
 166.3
Adult Crop
 
 240.2
Adult Midgut
 
 164.3
Adult Hindgut
 
 160.8
Adult Malpighian Tubules
 
 175.4
Adult Fat Body
 
 323.2
Adult Salivary Gland
 
 228.5
Adult Heart
 
 132.425
Adult VirginFemale Spermatheca
 
 616.7
Adult InseminatedFemale Spermatheca
 
 520.2
Adult Ovary
 
 760.8
Adult Testis
 
 80
Adult Male Accessory Gland
 
 194.6
Adult Carcass
 
 150.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 1114.15
Larval Midgut
 
 188.2
Larval Hindgut
 
 278.9
Larval Malpighian Tubules
 
 263.1
Larval Fat Body
 
 258.4
Larval Salivary Gland
 
 635.7
Larval Trachea
 
 340.35
Larval Carcass
 
 337.175
Adult Head
 
 140.6
Adult Eye
 
 100.325
Adult Brain
 
 193.1
Adult Thoracic-Abdominal Ganglion
 
 166.3
Adult Crop
 
 240.2
Adult Midgut
 
 164.3
Adult Hindgut
 
 160.8
Adult Malpighian Tubules
 
 175.4
Adult Fat Body
 
 323.2
Adult Salivary Gland
 
 228.5
Adult Heart
 
 132.425
Adult VirginFemale Spermatheca
 
 616.7
Adult InseminatedFemale Spermatheca
 
 520.2
Adult Ovary
 
 760.8
Adult Testis
 
 80
Adult Male Accessory Gland
 
 194.6
Adult Carcass
 
 150.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0002736 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 1114.15
Larval Midgut
 
 188.2
Larval Hindgut
 
 278.9
Larval Malpighian Tubules
 
 263.1
Larval Fat Body
 
 258.4
Larval Salivary Gland
 
 635.7
Larval Trachea
 
 340.35
Larval Carcass
 
 337.175
Adult Head
 
 140.6
Adult Eye
 
 100.325
Adult Brain
 
 193.1
Adult Thoracic-Abdominal Ganglion
 
 166.3
Adult Crop
 
 240.2
Adult Midgut
 
 164.3
Adult Hindgut
 
 160.8
Adult Malpighian Tubules
 
 175.4
Adult Fat Body
 
 323.2
Adult Salivary Gland
 
 228.5
Adult Heart
 
 132.425
Adult VirginFemale Spermatheca
 
 616.7
Adult InseminatedFemale Spermatheca
 
 520.2
Adult Ovary
 
 760.8
Adult Testis
 
 80
Adult Male Accessory Gland
 
 194.6
Adult Carcass
 
 150.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (1114.15)
Larval Midgut
 
 188.2
Larval Hindgut
 
 278.9
Larval Malpighian Tubules
 
 263.1
Larval Fat Body
 
 258.4
Larval Salivary Gland
 635.7
Larval Trachea
 
 340.35
Larval Carcass
 
 337.175
Adult Head
 
 140.6
Adult Eye
 
 100.325
Adult Brain
 
 193.1
Adult Thoracic-Abdominal Ganglion
 
 166.3
Adult Crop
 
 240.2
Adult Midgut
 
 164.3
Adult Hindgut
 
 160.8
Adult Malpighian Tubules
 
 175.4
Adult Fat Body
 
 323.2
Adult Salivary Gland
 
 228.5
Adult Heart
 
 132.425
Adult VirginFemale Spermatheca
 616.7
Adult InseminatedFemale Spermatheca
 520.2
Adult Ovary
 760.8
Adult Testis
 
 80
Adult Male Accessory Gland
 
 194.6
Adult Carcass
 
 150.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 1114.15
Larval Midgut
 
 188.2
Larval Hindgut
 
 278.9
Larval Malpighian Tubules
 
 263.1
Larval Fat Body
 
 258.4
Larval Salivary Gland
 
 635.7
Larval Trachea
 
 340.35
Larval Carcass
 
 337.175
Adult Head
 
 140.6
Adult Eye
 
 100.325
Adult Brain
 
 193.1
Adult Thoracic-Abdominal Ganglion
 
 166.3
Adult Crop
 
 240.2
Adult Midgut
 
 164.3
Adult Hindgut
 
 160.8
Adult Malpighian Tubules
 
 175.4
Adult Fat Body
 
 323.2
Adult Salivary Gland
 
 228.5
Adult Heart
 
 132.425
Adult VirginFemale Spermatheca
 
 616.7
Adult InseminatedFemale Spermatheca
 
 520.2
Adult Ovary
 
 760.8
Adult Testis
 
 80
Adult Male Accessory Gland
 
 194.6
Adult Carcass
 
 150.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 1114.15
Larval Midgut
 
 188.2
Larval Hindgut
 
 278.9
Larval Malpighian Tubules
 
 263.1
Larval Fat Body
 
 258.4
Larval Salivary Gland
 
 635.7
Larval Trachea
 
 340.35
Larval Carcass
 
 337.175
Adult Head
 
 140.6
Adult Eye
 
 100.325
Adult Brain
 
 193.1
Adult Thoracic-Abdominal Ganglion
 
 166.3
Adult Crop
 
 240.2
Adult Midgut
 
 164.3
Adult Hindgut
 
 160.8
Adult Malpighian Tubules
 
 175.4
Adult Fat Body
 
 323.2
Adult Salivary Gland
 
 228.5
Adult Heart
 
 132.425
Adult VirginFemale Spermatheca
 
 616.7
Adult InseminatedFemale Spermatheca
 
 520.2
Adult Ovary
 
 760.8
Adult Testis
 
 80
Adult Male Accessory Gland
 
 194.6
Adult Carcass
 
 150.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 140.6
 
NA 
Eye
 
 100.325
 
NA 
Brain
 
 193.1
 
1114.15 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 166.3
 
NA 
Crop
 
 240.2
 
188.2 
Midgut
 
 164.3
 
278.9 
Hindgut
 
 160.8
 
263.1 
Malpighian Tubules
 
 175.4
 
258.4 
Fat Body
 
 323.2
 
635.7 
Salivary Gland
 
 228.5
 
NA 
Heart
 
 132.425
 
340.35 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 616.7
 
NA 
InseminatedFemale Spermatheca
 
 520.2
 
NA 
Ovary
 
 760.8
 
NA 
Testis
 
 80
 
NA 
Male Accessory Gland
 
 194.6
 
337.175 
Carcass
 
 150.3

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
microtubule & egg chamber
microtubule & oocyte
hide Classical Alleles ( 14 )
For All Classical Alleles Show

Allele of magoClassMutagenStocksKnown lesion
magoKG031191 --
mago115F
0 Yes
mago1antimorphic allele - genetic evidence, hypomorphic allele - genetic evidence0 Yes
mago2antimorphic allele - genetic evidence, hypomorphic allele - genetic evidence0 --
mago30 Yes
mago69L
0 Yes
mago93D
0 Yes
magoE19A0 Yes
magoETo20 --
magoRE20 Yes
magoRE70 Yes
magoSHL10 Yes
magounspecified
0 --
magoWE70 Yes
hide Alleles Carried on Transgenic Constructs ( 9 )
For All Alleles Carried on Transgenic Constructs Show

Allele of magoClassMutagenStocksKnown lesion
magoGD125561 Yes
magoGL003781 Yes
magoHM051421 Yes
mago+t2.20 --
mago1.T:Hsap\MYC0 Yes
magodsRNA.cLa0 --
magoT:Avic\GFP0 Yes
magoT:Hsap\MYC0 Yes
magoαTub67C.T:Avic\GFP0 Yes
hide Aneuploid Aberrations
Disrupted in
Not disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
miscellaneous insertions
hide Gene Ontology: Function, Process & Cellular Component ( 22 unique terms )
hide Terms Based on Experimental Evidence ( 11 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
inferred from mutant phenotype AND inferred from physical interaction with tsu
Cellular Component
CV term
References
inferred from direct assay
inferred from physical interaction with tsu
inferred from direct assay
inferred from direct assay
hide Terms Based on Predictions or Assertions ( 15 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
non-traceable author statement
traceable author statement
non-traceable author statement
traceable author statement
Cellular Component
CV term
References
non-traceable author statement
non-traceable author statement
hide Sequence Ontology: Class of Gene
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hide Summary of Physical Interactions
Protein-protein
Interacting group
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References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
mago allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
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hide Stocks Listed in FlyBase ( 4 )
Bloomington
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 65 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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hide Etymology
"mago nashi" is Japanese for "without grandchildren".
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
hide Other Comments
mago has a role in the splicing regulation of genes containing long introns.
mago has a role in the splicing regulation of heterochromatic genes containing long introns.
dsRNA has been made from templates generated with primers directed against this gene.
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
The mago/tsu physical interaction is conserved, occurs in vitro and in vivo and is not RNA mediated. mago and tsu gene products localize within nuclear speckles. mago/tsu heterodimers associate with spliced mRNAs carrying an exon-exon junction complex.
mago and tsu are required for cell viability.
mago plays two essential roles in Drosophila axis formation: it is required downstream of the signal from the posterior follicle cells for the polarisation of the oocyte microtubule cytoskeleton, and it has a second, independent role in the localisation of osk mRNA to the posterior of the oocyte.
mago protein must be localised within the posterior pole plasm for germ-plasm assembly.
Distribution of tud protein in mutant embryos has been studied.
mago gene product is a component of the posterior determinative system, required during oogenesis for germ cell determination and delineation of the longitudinal axis of the embryo.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Mago nashi protein (IPR004023)
PDB - Protein Data Bank. An information portal to biological macromolecular structures
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 15 )
Reported As
Symbol Synonym
Name Synonym
Secondary FlyBase IDs
  • FBgn0002095
hide References ( 112 )
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hide Recent research papers ( 7 )
Dottorini et al., 2011, BMC Bioinformatics 12: 34
Gepoclu: a software tool for identifying and analyzing gene positional clusters in large-scale gene expression analysis. [FBrf0214379]
Ashton-Beaucage et al., 2010, Cell 143(2): 251--262
The exon junction complex controls the splicing of MAPK and other long intron-containing transcripts in Drosophila. [FBrf0212064]
Blanco et al., 2010, BMC Dev. Biol. 10: 94
Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812]
Bono et al., 2010, Mol. Cell 37(2): 211--222
Nuclear Import Mechanism of the EJC Component Mago-Y14 Revealed by Structural Studies of Importin 13. [FBrf0209868]
Lewandowski et al., 2010, Dev. Biol. 339(2): 307--319
Mago Nashi, Tsunagi/Y14, and Ranshi form a complex that influences oocyte differentiation in Drosophila melanogaster. [FBrf0210119]
Roignant and Treisman, 2010, Cell 143(2): 238--250
Exon Junction Complex Subunits Are Required to Splice Drosophila MAP Kinase, a Large Heterochromatic Gene. [FBrf0212083]
Saulière et al., 2010, Nat. Struct. Mol. Biol. 17(10): 1269--1271
The exon junction complex differentially marks spliced junctions. [FBrf0212018]
hide Recent reviews (0)
All reviews listed in FlyBase were published before 2010