A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene Dmel\ms(3)K81

General Information
SymbolDmel\ms(3)K81SpeciesD. melanogaster
Namemale sterile (3) K81Annotation symbolCG14251
Feature typeprotein_coding_geneFlyBase IDFBgn0002838
Gene Model StatusCurrent Stock availability 3 publicly available
Also Known AsK81
Genomic Location
Chromosome (arm)3RRecombination map3-91.3
Cytogenetic map97D4-97D4Sequence location3R:22,701,574..22,702,284 [+]

Genomic Maps

GBrowse View Help
Beta
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene male sterile (3) K81 is referred to in FlyBase by the symbol Dmel\ms(3)K81 (CG14251, FBgn0002838). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process: telomere capping. 16 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of no expression detected. Peak expression observed at stages throughout the pupal period, in adult male stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult testis. Comments on Affy2 ProbeSet: ProbeSet 1636834_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of ms(3)K81. Gene sequence location is 3R:22701574..22702284.

User Contributed Data
hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
ms(3)K81
Homozygous males produce motile sperm capable of fertilizing eggs, but defective in pronuclear function. Development of fertilized eggs initiated; arrested after several nuclear divisions in three-fourths of the embryos, the remainder developing beyond blastoderm and proving to be haploid upon cytological examination. Nuclear division cycle protracted compared to wild type, and the syncytial blastoderm nuclei undergo an extra division to produce twice the normal density prior to cellularization (Edgar, Kiehle, and Schuberger, 1986, Cell 44: 365-72). A small fraction of the eggs diploidize and yield viable daughters, mostly by fusion of products of the first meiotic division (85%); fusion of products of second meiotic divison rare or nonexistent. Incidence of gynogenetic diploids becomes appreciable in crosses to a stock designated G9 by Fuyama (1986, Genetics 114: 495-509).
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
atom feed
FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
97D4-97D4  
Limits computationally determined from genome sequence between P{lacW}His2AvL1602 and P{PZ}sda03884  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
3-91.3
 
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\ms(3)K81 for information on other features GBrowse View Help
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0100334 FBtr0100337 FBtr0100340 FBtr0085093 FBtr0100339 FBtr0085092 FBtr0100338 FBtr0100335 FBtr0100336 FBtr0085063 FBtr0085064 FBtr0085090 FBtr0085091 FBpp0099742 FBpp0099740 FBpp0099743 FBpp0084462 FBpp0099745 FBpp0099744 FBpp0099739 FBpp0099741 FBpp0084463 FBpp0084435 FBpp0084461 FBpp0084460 FBti0003551 FBti0110529 FBti0008039 FBti0126303_1 FBti0126303_2 FBti0002241 FBti0148059
Comments on Gene Model
Gene model reviewed during 5.47
Gene model reviewed during 5.48
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
ms(3)K81-RA
FBtr0085063
 NM_143253
  711
  184
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
ms(3)K81-PA  
FBpp0084435  
20.1  
184  
8.85  
  NP_651510
  AAF56634
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
AE014297
AAF56634
 
AJ557255
CAD89871
 
BT022562
 
EL876539
 
EL876540
 
EL876876
 
EL882950
 
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
hide Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term
Evidence
References
chromosome, telomeric region
inferred from direct assay
(Gao et al., 2011, Dubruille et al., 2010)
condensed nuclear chromosome
inferred from direct assay
(Gao et al., 2011)
nucleus
inferred from direct assay
(Dubruille et al., 2010)
hide Expression Deduced from Reporters
hide High-Throughput Expression Data
Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
hide FlyAtlas Anatomy Microarray

FlyAtlas Anatomical Expression Data

(FlyAtlas-RNA.adult)

(FlyAtlas-RNA.larva)


   Styles
   Scales

Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult testis.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
 No expression (0 - 9.999)
 
 Low expression (10 - 99.999)
 
 Moderate expression (100 - 499.999)
 
 High level expression (500 - 999.999)
 
 Very high expression (>999.999)

Linear, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 3.925
Larval Midgut
 
 0.8
Larval Hindgut
 
 2
Larval Malpighian Tubules
 
 1.9
Larval Fat Body
 
 28.2
Larval Salivary Gland
 
 4.3
Larval Trachea
 
 4.175
Larval Carcass
 
 3.525
Adult Head
 
 2.1
Adult Eye
 
 1.45
Adult Brain
 
 1.6
Adult Thoracic-Abdominal Ganglion
 
 1.5
Adult Crop
 
 3.6
Adult Midgut
 
 1.3
Adult Hindgut
 
 4.5
Adult Malpighian Tubules
 
 1
Adult Fat Body
 
 2.8
Adult Salivary Gland
 
 2.8
Adult Heart
 
 1.525
Adult VirginFemale Spermatheca
 
 1.6
Adult InseminatedFemale Spermatheca
 
 1.9
Adult Ovary
 
 0.9
Adult Testis
 
 135.1
Adult Male Accessory Gland
 
 6.7
Adult Carcass
 
 3.2
Expression Level Scale
 None 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 3.925
Larval Midgut
 
 0.8
Larval Hindgut
 
 2
Larval Malpighian Tubules
 
 1.9
Larval Fat Body
 
 28.2
Larval Salivary Gland
 
 4.3
Larval Trachea
 
 4.175
Larval Carcass
 
 3.525
Adult Head
 
 2.1
Adult Eye
 
 1.45
Adult Brain
 
 1.6
Adult Thoracic-Abdominal Ganglion
 
 1.5
Adult Crop
 
 3.6
Adult Midgut
 
 1.3
Adult Hindgut
 
 4.5
Adult Malpighian Tubules
 
 1
Adult Fat Body
 
 2.8
Adult Salivary Gland
 
 2.8
Adult Heart
 
 1.525
Adult VirginFemale Spermatheca
 
 1.6
Adult InseminatedFemale Spermatheca
 
 1.9
Adult Ovary
 
 0.9
Adult Testis
 
 135.1
Adult Male Accessory Gland
 
 6.7
Adult Carcass
 
 3.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 3.925
Larval Midgut
 
 0.8
Larval Hindgut
 
 2
Larval Malpighian Tubules
 
 1.9
Larval Fat Body
 
 28.2
Larval Salivary Gland
 
 4.3
Larval Trachea
 
 4.175
Larval Carcass
 
 3.525
Adult Head
 
 2.1
Adult Eye
 
 1.45
Adult Brain
 
 1.6
Adult Thoracic-Abdominal Ganglion
 
 1.5
Adult Crop
 
 3.6
Adult Midgut
 
 1.3
Adult Hindgut
 
 4.5
Adult Malpighian Tubules
 
 1
Adult Fat Body
 
 2.8
Adult Salivary Gland
 
 2.8
Adult Heart
 
 1.525
Adult VirginFemale Spermatheca
 
 1.6
Adult InseminatedFemale Spermatheca
 
 1.9
Adult Ovary
 
 0.9
Adult Testis
 
 135.1
Adult Male Accessory Gland
 
 6.7
Adult Carcass
 
 3.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 3.925
Larval Midgut
 
 0.8
Larval Hindgut
 
 2
Larval Malpighian Tubules
 
 1.9
Larval Fat Body
 
 28.2
Larval Salivary Gland
 
 4.3
Larval Trachea
 
 4.175
Larval Carcass
 
 3.525
Adult Head
 
 2.1
Adult Eye
 
 1.45
Adult Brain
 
 1.6
Adult Thoracic-Abdominal Ganglion
 
 1.5
Adult Crop
 
 3.6
Adult Midgut
 
 1.3
Adult Hindgut
 
 4.5
Adult Malpighian Tubules
 
 1
Adult Fat Body
 
 2.8
Adult Salivary Gland
 
 2.8
Adult Heart
 
 1.525
Adult VirginFemale Spermatheca
 
 1.6
Adult InseminatedFemale Spermatheca
 
 1.9
Adult Ovary
 
 0.9
Adult Testis
 
 135.1
Adult Male Accessory Gland
 
 6.7
Adult Carcass
 
 3.2
Expression Level Scale
 Very high 
log, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 3.925
Larval Midgut
 
 0.8
Larval Hindgut
 
 2
Larval Malpighian Tubules
 
 1.9
Larval Fat Body
 
 28.2
Larval Salivary Gland
 
 4.3
Larval Trachea
 
 4.175
Larval Carcass
 
 3.525
Adult Head
 
 2.1
Adult Eye
 
 1.45
Adult Brain
 
 1.6
Adult Thoracic-Abdominal Ganglion
 
 1.5
Adult Crop
 
 3.6
Adult Midgut
 
 1.3
Adult Hindgut
 
 4.5
Adult Malpighian Tubules
 
 1
Adult Fat Body
 
 2.8
Adult Salivary Gland
 
 2.8
Adult Heart
 
 1.525
Adult VirginFemale Spermatheca
 
 1.6
Adult InseminatedFemale Spermatheca
 
 1.9
Adult Ovary
 
 0.9
Adult Testis
 
 135.1
Adult Male Accessory Gland
 
 6.7
Adult Carcass
 
 3.2
Expression Level Scale
 None 
 Low 
 Moderate 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 3.925
Larval Midgut
 
 0.8
Larval Hindgut
 
 2
Larval Malpighian Tubules
 
 1.9
Larval Fat Body
 
 28.2
Larval Salivary Gland
 
 4.3
Larval Trachea
 
 4.175
Larval Carcass
 
 3.525
Adult Head
 
 2.1
Adult Eye
 
 1.45
Adult Brain
 
 1.6
Adult Thoracic-Abdominal Ganglion
 
 1.5
Adult Crop
 
 3.6
Adult Midgut
 
 1.3
Adult Hindgut
 
 4.5
Adult Malpighian Tubules
 
 1
Adult Fat Body
 
 2.8
Adult Salivary Gland
 
 2.8
Adult Heart
 
 1.525
Adult VirginFemale Spermatheca
 
 1.6
Adult InseminatedFemale Spermatheca
 
 1.9
Adult Ovary
 
 0.9
Adult Testis
 
 135.1
Adult Male Accessory Gland
 
 6.7
Adult Carcass
 
 3.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 3.925
Larval Midgut
 
 0.8
Larval Hindgut
 
 2
Larval Malpighian Tubules
 
 1.9
Larval Fat Body
 
 28.2
Larval Salivary Gland
 
 4.3
Larval Trachea
 
 4.175
Larval Carcass
 
 3.525
Adult Head
 
 2.1
Adult Eye
 
 1.45
Adult Brain
 
 1.6
Adult Thoracic-Abdominal Ganglion
 
 1.5
Adult Crop
 
 3.6
Adult Midgut
 
 1.3
Adult Hindgut
 
 4.5
Adult Malpighian Tubules
 
 1
Adult Fat Body
 
 2.8
Adult Salivary Gland
 
 2.8
Adult Heart
 
 1.525
Adult VirginFemale Spermatheca
 
 1.6
Adult InseminatedFemale Spermatheca
 
 1.9
Adult Ovary
 
 0.9
Adult Testis
 
 135.1
Adult Male Accessory Gland
 
 6.7
Adult Carcass
 
 3.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 3.925
Larval Midgut
 
 0.8
Larval Hindgut
 
 2
Larval Malpighian Tubules
 
 1.9
Larval Fat Body
 
 28.2
Larval Salivary Gland
 
 4.3
Larval Trachea
 
 4.175
Larval Carcass
 
 3.525
Adult Head
 
 2.1
Adult Eye
 
 1.45
Adult Brain
 
 1.6
Adult Thoracic-Abdominal Ganglion
 
 1.5
Adult Crop
 
 3.6
Adult Midgut
 
 1.3
Adult Hindgut
 
 4.5
Adult Malpighian Tubules
 
 1
Adult Fat Body
 
 2.8
Adult Salivary Gland
 
 2.8
Adult Heart
 
 1.525
Adult VirginFemale Spermatheca
 
 1.6
Adult InseminatedFemale Spermatheca
 
 1.9
Adult Ovary
 
 0.9
Adult Testis
 
 135.1
Adult Male Accessory Gland
 
 6.7
Adult Carcass
 
 3.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 		 Head
 
 2.1
 
NA 		 Eye
 
 1.45
 
NA 		 Brain
 
 1.6
 
3.925 		 Central Nervous System
 
 NA
 
NA 		 Thoracic-Abdominal Ganglion
 
 1.5
 
NA 		 Crop
 
 3.6
 
0.8 		 Midgut
 
 1.3
 
2 		 Hindgut
 
 4.5
 
1.9 		 Malpighian Tubules
 
 1
 
28.2 		 Fat Body
 
 2.8
 
4.3 		 Salivary Gland
 
 2.8
 
NA 		 Heart
 
 1.525
 
4.175 		 Trachea
 
 NA
 
NA 		 VirginFemale Spermatheca
 
 1.6
 
NA 		 InseminatedFemale Spermatheca
 
 1.9
 
NA 		 Ovary
 
 0.9
 
NA 		 Testis
 
 135.1
 
NA 		 Male Accessory Gland
 
 6.7
 
3.525 		 Carcass
 
 3.2

FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
 No/Extremely low expression (0 - 0)
 
 Very low expression (1 - 3)
 
 Low expression (4 - 10)
 
 Moderate expression (11 - 25)
 
 Moderately high expression (26 - 50)
 
 High expression (51 - 100)
 
 Very high expression (101 - 1000)
 
 Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 5
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 12
accessory gland, mated 4-day male
 
 2
Expression Level Scale
 Very low 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 5
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 12
accessory gland, mated 4-day male
 
 2
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 5
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 12
accessory gland, mated 4-day male
 
 2
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 5
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 12
accessory gland, mated 4-day male
 
 2
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 5
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 12
accessory gland, mated 4-day male
 
 2
Expression Level Scale
 Very low 
 Low 
 Moderate 
log, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 5
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 12
accessory gland, mated 4-day male
 
 2
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 5
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 12
accessory gland, mated 4-day male
 
 2
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 5
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 12
accessory gland, mated 4-day male
 
 2
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 
central nervous system, larvae L3
 
 
central nervous system, pupae P8
 
 
head, virgin 1-day female
 
 
head, virgin 4-day female
 
 
head, virgin 20-day female
 
 
head, mated 1-day female
 
 
head, mated 4-day female
 
 
head, mated 20-day female
 
 
head, mated 1-day male
 
 
head, mated 4-day male
 
 
head, mated 20-day male
 
 
salivary gland, larvae L3 wandering
 
 
salivary gland, white prepupae
 
 
digestive system, larvae L3 wandering
 
 
digestive system, 1-day adult
 
 
digestive system, 4-day adult
 
 
digestive system, 20-day adult
 
 
fat body, larvae L3 wandering
 
 
fat body, white prepupae
 
 
fat body, pupae P8
 
 
carcass, larvae L3 wandering
 
 
carcass, 1-day adult
 
 
carcass, 4-day adult
 
 
carcass, 20-day adult
 
 
ovary, virgin 4-day female
 
 
ovary, mated 4-day female
 
 
testis, mated 4-day male
 
 
accessory gland, mated 4-day male
 
 

hide modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)


   Styles
   Scales

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of no expression detected. Peak expression observed at stages throughout the pupal period, in adult male stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
 No/Extremely low expression (0 - 0)
 
 Very low expression (1 - 3)
 
 Low expression (4 - 10)
 
 Moderate expression (11 - 25)
 
 Moderately high expression (26 - 50)
 
 High expression (51 - 100)
 
 Very high expression (101 - 1000)
 
 Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 1
embryo 04-06hr
 
 3
embryo 06-08hr
 
 2
embryo 08-10hr
 
 1
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 0
embryo 16-18hr
 
 0
embryo 18-20hr
 
 0
embryo 20-22hr
 
 0
embryo 22-24hr
 
 0
larva L1
 
 0
larva L2
 
 0
larva L3 12hr old
 
 0
larva L3 puffstage 1-2
 
 1
larva L3 puffstage 3-6
 
 2
larva L3 puffstage 7-9
 
 3
white prepupae new
 
 3
white prepupae 12hr
 
 4
white prepupae 24hr
 
 6
pupae 2d postWPP
 
 6
pupae 3d postWPP
 
 4
pupae 4d postWPP
 
 3
adult male 01day
 
 6
adult male 05day
 
 9
adult male 30day
 
 7
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 1
embryo 04-06hr
 
 3
embryo 06-08hr
 
 2
embryo 08-10hr
 
 1
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 0
embryo 16-18hr
 
 0
embryo 18-20hr
 
 0
embryo 20-22hr
 
 0
embryo 22-24hr
 
 0
larva L1
 
 0
larva L2
 
 0
larva L3 12hr old
 
 0
larva L3 puffstage 1-2
 
 1
larva L3 puffstage 3-6
 
 2
larva L3 puffstage 7-9
 
 3
white prepupae new
 
 3
white prepupae 12hr
 
 4
white prepupae 24hr
 
 6
pupae 2d postWPP
 
 6
pupae 3d postWPP
 
 4
pupae 4d postWPP
 
 3
adult male 01day
 
 6
adult male 05day
 
 9
adult male 30day
 
 7
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 1
embryo 04-06hr
 
 3
embryo 06-08hr
 
 2
embryo 08-10hr
 
 1
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 0
embryo 16-18hr
 
 0
embryo 18-20hr
 
 0
embryo 20-22hr
 
 0
embryo 22-24hr
 
 0
larva L1
 
 0
larva L2
 
 0
larva L3 12hr old
 
 0
larva L3 puffstage 1-2
 
 1
larva L3 puffstage 3-6
 
 2
larva L3 puffstage 7-9
 
 3
white prepupae new
 
 3
white prepupae 12hr
 
 4
white prepupae 24hr
 
 6
pupae 2d postWPP
 
 6
pupae 3d postWPP
 
 4
pupae 4d postWPP
 
 3
adult male 01day
 
 6
adult male 05day
 
 9
adult male 30day
 
 7
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 1
embryo 04-06hr
 
 3
embryo 06-08hr
 
 2
embryo 08-10hr
 
 1
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 0
embryo 16-18hr
 
 0
embryo 18-20hr
 
 0
embryo 20-22hr
 
 0
embryo 22-24hr
 
 0
larva L1
 
 0
larva L2
 
 0
larva L3 12hr old
 
 0
larva L3 puffstage 1-2
 
 1
larva L3 puffstage 3-6
 
 2
larva L3 puffstage 7-9
 
 3
white prepupae new
 
 3
white prepupae 12hr
 
 4
white prepupae 24hr
 
 6
pupae 2d postWPP
 
 6
pupae 3d postWPP
 
 4
pupae 4d postWPP
 
 3
adult male 01day
 
 6
adult male 05day
 
 9
adult male 30day
 
 7
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 1
embryo 04-06hr
 
 3
embryo 06-08hr
 
 2
embryo 08-10hr
 
 1
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 0
embryo 16-18hr
 
 0
embryo 18-20hr
 
 0
embryo 20-22hr
 
 0
embryo 22-24hr
 
 0
larva L1
 
 0
larva L2
 
 0
larva L3 12hr old
 
 0
larva L3 puffstage 1-2
 
 1
larva L3 puffstage 3-6
 
 2
larva L3 puffstage 7-9
 
 3
white prepupae new
 
 3
white prepupae 12hr
 
 4
white prepupae 24hr
 
 6
pupae 2d postWPP
 
 6
pupae 3d postWPP
 
 4
pupae 4d postWPP
 
 3
adult male 01day
 
 6
adult male 05day
 
 9
adult male 30day
 
 7
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 1
embryo 04-06hr
 
 3
embryo 06-08hr
 
 2
embryo 08-10hr
 
 1
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 0
embryo 16-18hr
 
 0
embryo 18-20hr
 
 0
embryo 20-22hr
 
 0
embryo 22-24hr
 
 0
larva L1
 
 0
larva L2
 
 0
larva L3 12hr old
 
 0
larva L3 puffstage 1-2
 
 1
larva L3 puffstage 3-6
 
 2
larva L3 puffstage 7-9
 
 3
white prepupae new
 
 3
white prepupae 12hr
 
 4
white prepupae 24hr
 
 6
pupae 2d postWPP
 
 6
pupae 3d postWPP
 
 4
pupae 4d postWPP
 
 3
adult male 01day
 
 6
adult male 05day
 
 9
adult male 30day
 
 7
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 1
embryo 04-06hr
 
 3
embryo 06-08hr
 
 2
embryo 08-10hr
 
 1
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 0
embryo 16-18hr
 
 0
embryo 18-20hr
 
 0
embryo 20-22hr
 
 0
embryo 22-24hr
 
 0
larva L1
 
 0
larva L2
 
 0
larva L3 12hr old
 
 0
larva L3 puffstage 1-2
 
 1
larva L3 puffstage 3-6
 
 2
larva L3 puffstage 7-9
 
 3
white prepupae new
 
 3
white prepupae 12hr
 
 4
white prepupae 24hr
 
 6
pupae 2d postWPP
 
 6
pupae 3d postWPP
 
 4
pupae 4d postWPP
 
 3
adult male 01day
 
 6
adult male 05day
 
 9
adult male 30day
 
 7
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 1
embryo 04-06hr
 
 3
embryo 06-08hr
 
 2
embryo 08-10hr
 
 1
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 0
embryo 16-18hr
 
 0
embryo 18-20hr
 
 0
embryo 20-22hr
 
 0
embryo 22-24hr
 
 0
larva L1
 
 0
larva L2
 
 0
larva L3 12hr old
 
 0
larva L3 puffstage 1-2
 
 1
larva L3 puffstage 3-6
 
 2
larva L3 puffstage 7-9
 
 3
white prepupae new
 
 3
white prepupae 12hr
 
 4
white prepupae 24hr
 
 6
pupae 2d postWPP
 
 6
pupae 3d postWPP
 
 4
pupae 4d postWPP
 
 3
adult male 01day
 
 6
adult male 05day
 
 9
adult male 30day
 
 7
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

modENCODE Temporal Expression Data (Graveley et al., 2011)
hide modENCODE Cell Lines RNA-Seq

modENCODE Cell Line Expression Data

(modENCODE_mRNA-Seq_cell.A)

(modENCODE_mRNA-Seq_cell.B)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
 No/Extremely low expression (0 - 0)
 
 Very low expression (1 - 3)
 
 Low expression (4 - 10)
 
 Moderate expression (11 - 25)
 
 Moderately high expression (26 - 50)
 
 High expression (51 - 100)
 
 Very high expression (101 - 1000)
 
 Extremely high expression (>1000)

Linear, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 1
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 1
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 1
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 1
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 1
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
log, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 1
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 1
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 1
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Cell Line   Expression Level
Schneider line 2 S2R+
 
 
Schneider line 2 Sg4
 
 
embryonic 1182-4H
 
 
embryonic GM2
 
 
embryonic Kc167
 
 
embryonic S1
 
 
embryonic S3
 
 
leg disc CME L1
 
 
wing disc CME-W2
 
 
wing disc ML-DmD8
 
 
wing disc ML-DmD9
 
 
wing disc ML-DmD16-c3
 
 
wing disc ML-DmD21
 
 
wing disc ML-DmD32
 
 
haltere disc ML-DmD17-c3
 
 
eye-antennal disc ML-DmD11
 
 
antennal disc ML-DmD20-c5
 
 
mixed discs ML-DmD4-c1
 
 
CNS ML-DmBG1-c1
 
 
CNS ML-DmBG2-c2
 
 
tumorous blood cells mbn2
 
 
ovary fGS/OSS
 
 
ovary OSC
 
 
ovary OSS
 
 

hide modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
 No/Extremely low expression (0 - 0)
 
 Very low expression (1 - 3)
 
 Low expression (4 - 10)
 
 Moderate expression (11 - 25)
 
 Moderately high expression (26 - 50)
 
 High expression (51 - 100)
 
 Very high expression (101 - 1000)
 
 Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 0
cold shock, 4-day adult
 
 0
heat shock, 4-day adult
 
 1
Cadmium 50 mM 6 hrs, larvae L3
 
 1
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 0
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 0
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 0
Zinc 4.5 mM 48 hrs, 4-day adult
 
 0
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 1
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 0
cold shock, 4-day adult
 
 0
heat shock, 4-day adult
 
 1
Cadmium 50 mM 6 hrs, larvae L3
 
 1
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 0
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 0
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 0
Zinc 4.5 mM 48 hrs, 4-day adult
 
 0
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 1
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 0
cold shock, 4-day adult
 
 0
heat shock, 4-day adult
 
 1
Cadmium 50 mM 6 hrs, larvae L3
 
 1
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 0
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 0
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 0
Zinc 4.5 mM 48 hrs, 4-day adult
 
 0
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 1
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 0
cold shock, 4-day adult
 
 0
heat shock, 4-day adult
 
 1
Cadmium 50 mM 6 hrs, larvae L3
 
 1
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 0
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 0
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 0
Zinc 4.5 mM 48 hrs, 4-day adult
 
 0
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 1
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 0
cold shock, 4-day adult
 
 0
heat shock, 4-day adult
 
 1
Cadmium 50 mM 6 hrs, larvae L3
 
 1
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 0
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 0
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 0
Zinc 4.5 mM 48 hrs, 4-day adult
 
 0
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 1
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
log, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 0
cold shock, 4-day adult
 
 0
heat shock, 4-day adult
 
 1
Cadmium 50 mM 6 hrs, larvae L3
 
 1
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 0
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 0
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 0
Zinc 4.5 mM 48 hrs, 4-day adult
 
 0
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 1
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 0
cold shock, 4-day adult
 
 0
heat shock, 4-day adult
 
 1
Cadmium 50 mM 6 hrs, larvae L3
 
 1
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 0
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 0
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 0
Zinc 4.5 mM 48 hrs, 4-day adult
 
 0
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 1
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 0
cold shock, 4-day adult
 
 0
heat shock, 4-day adult
 
 1
Cadmium 50 mM 6 hrs, larvae L3
 
 1
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 0
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 0
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 0
Zinc 4.5 mM 48 hrs, 4-day adult
 
 0
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 1
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Treatment   Expression Level
extended cold, 4-day adult
 
 
cold shock, 4-day adult
 
 
heat shock, 4-day adult
 
 
Cadmium 50 mM 6 hrs, larvae L3
 
 
Cadmium 50 mM 12 hrs, larvae L3
 
 
Cadmium 50 mM 48 hrs, 4-day adult
 
 
Cadmium 100 mM 48 hrs, 4-day adult
 
 
Copper 0.5 mM 12 hrs, larvae L3
 
 
Copper 15 mM 48 hrs, 4-day adult
 
 
Zinc 5 mM 12 hrs, larvae L3
 
 
Zinc 4.5 mM 48 hrs, 4-day adult
 
 
Ethanol 2.5% 3 hrs, larvae L3
 
 
Ethanol 5% 3 hrs, larvae L3
 
 
Ethanol 10% 3 hrs, larvae L3
 
 
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 
Paraquat 5 mM 48 hrs, 4-day adult
 
 
Paraquat 10 mM 48 hrs, 4-day adult
 
 
Rotenone 2 μg 12 hrs, larvae L3
 
 
Rotenone 8 μg 12 hrs, larvae L3
 
 

hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
(The modENCODE Consortium, 2010, Graveley et al., 2011)
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
•
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
•
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
lethal
lethal | paternal effect
viable
viable, with Scer\GAL4pnr-MD237
Sterility
Allele
male sterile (with Df(3R)ms(3)K81-2)
Other Phenotypes
Allele
mitotic cell cycle defective | paternal effect
Phenotype manifest in
Allele
chromosome | paternal effect
hide Classical Alleles ( 5 )
For All Classical Alleles Show

Allele of ms(3)K81ClassMutagenStocksKnown lesion
ms(3)K8111 Yes
ms(3)K8160 Yes
ms(3)K81unspecified
0 --
ms(3)K81Z34160 Yes
ms(3)K81Z57950 Yes
hide Alleles Carried on Transgenic Constructs ( 11 )
For All Alleles Carried on Transgenic Constructs Show

Allele of ms(3)K81ClassMutagenStocksKnown lesion
ms(3)K81GD82741 Yes
ms(3)K81KK1110511 Yes
ms(3)K81+t1.7810 Yes
ms(3)K81+t2.40 Yes
ms(3)K81cGa.T:Avic\GFP0 Yes
ms(3)K81HipHop.T:Avic\GFP0 Yes
ms(3)K81NIG.14251R0 Yes
ms(3)K81PTV.T:Avic\GFP0 Yes
ms(3)K81Scer\UAS.T:Disc\RFP-mRFP0 Yes
ms(3)K81T:Avic\GFP-EGFP0 Yes
ms(3)K81T:Avic\GFP0 Yes
hide Aneuploid Aberrations
Disrupted in
(Yasuda et al., 1995)
(Yasuda et al., 1995)
(Yasuda et al., 1995)
(Yasuda et al., 1995)
(Yasuda et al., 1995)
(Yasuda et al., 1995)
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
UAS construct
P{GD8274}
NA
P{KK111051}
NA
P{NIG.14251R}
NA
P{UAS-ms(3)K81-GFP.mRFP1}
NA
characterization construct
P{HipHop-ms(3)K81.GFP.G}
NA
P{HipHop-ms(3)K81.GFP}
NA
P{ms(3)K81.2.4}
NA
P{ms(3)K81.GFP.PTV}
NA
P{ms(3)K81.GFP}
NA
P{ms(3)K81-EGFP.L}
NA
P{ms(3)K81-GFP.ms(3)K81}
NA
P{ms(3)K81-HipHop::ms(3)K81.GFP.aHbHcK}
NA
P{ms(3)K81-HipHop::ms(3)K81.GFP.aHbKcK}
NA
P{ms(3)K81-HipHop::ms(3)K81.GFP.aKbHcK}
NA
P{ms(3)K81-HipHop::ms(3)K81.GFP.aKbKcH}
NA
Insertions
Type of insertions
Name
Expression data
miscellaneous insertions
P{?'}ms(3)K811
NA
P{wHy}T48DG17103
NA
hide Gene Ontology: Function, Process & Cellular Component ( 4 unique terms )
hide Terms Based on Experimental Evidence ( 4 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
Evidence
References
telomere capping
inferred from mutant phenotype
(Dubruille et al., 2010)
Cellular Component
CV term
Evidence
References
chromosome, telomeric region
inferred from direct assay
(Gao et al., 2011, Dubruille et al., 2010)
condensed nuclear chromosome
inferred from direct assay
(Gao et al., 2011)
nucleus
inferred from direct assay
(Dubruille et al., 2010)
hide Terms Based on Predictions or Assertions ( 0 terms )
hide Sequence Ontology: Class of Gene
nuclear_gene
 
protein_coding_gene
 
hide Interactions & Pathways
hide Summary of Physical Interactions
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
ms(3)K81 allele
Gene
References
ms(3)K81unspecified
grp
(Grosshans et al., 2003)
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
•
DroID - A comprehensive database of gene and protein interactions.
•
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
•
hide Orthologs
hide OrthoDB Orthologs (6) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
OrthoDB orthology group searches
(Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288)
Drosophila inclusive ortholog search
EOG6T78PX
Dipteran inclusive ortholog search
No orthologs identified
Insect inclusive ortholog search
No orthologs identified
Arthropod inclusive ortholog search
No orthologs identified
Metazoa inclusive ortholog search
No orthologs identified
hideOrthologs in Drosophila Species (EOG6T78PX)
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly 
 
 
Drosophila simulans
 
Y
 
Drosophila sechellia
 
Y
 
Drosophila erecta
 
Y
 
Drosophila yakuba
 
Y
 
Drosophila willistoni
 
Y
 
Orthologs in non-Drosophila Dipterans (None identified)
No non-Drosophilid orthologies identified
Orthologs in non-Dipteran Insects (None identified)
No non-Dipteran orthologies identified
Orthologs in non-Insect Arthropods (None identified)
No non-Insect Arthropod orthologies identified
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
hide Human Orthologs (0)
Gene
OMIM
HGNC
hideAAA Orthologs (5) based on analysis using Dmel annotation version 4.3
Organism
Gene
Drosophila simulans
Drosophila sechellia
Drosophila erecta
Drosophila yakuba
Drosophila willistoni
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 3 )
Bloomington
5352
ms(3)K811/TM3, Sb1 Ser1
VDRC
v102203
P{KK111051}VIE-260B
v43585
w1118; P{GD8274}v43585
hide Genomic Clones ( 1 )

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 4 )

Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
•
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
•
hide Antibody Information
hide Other Information
hide Discoverer
hide Etymology
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Source for merge of: ms(3)K81 CG14251
(Yasuda and Wakimoto, 2003.3.18)
Additional comments
hide Other Comments
ms(3)K81 is a strict paternal effect lethal that does not affect sperm maturation or motility.
(Chang et al., 1995)
ms(3)K81 acts as a strict paternal effect gene. Embryonic lethal phenotypes of affected embryos suggest that ms(3)K81 encodes a sperm-specific product that is essential for the male pronucleus to participate in the first few embryonic nuclear divisions.
(Yasuda et al., 1995)
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
•
RefSeq (Proteins)
•
DDBJ / EMBL / GenBank
•
Entrez Gene - A searchable database of RefSeq genes.
•
UniProtKB/TrEMBL
•
Other Crossreferences
Linkouts
BioGRID - A database of protein and genetic interactions
•
DroID - A comprehensive database of gene and protein interactions.
•
DRSC - Results from RNAi screens.
•
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
•
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
•
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
•
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
•
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
•
modMine - Data generated by the modENCODE project.
•
hide Synonyms & Secondary IDs ( 9 )
Reported As
Symbol Synonym
CG14251
(Giot et al., 2003, Keleman et al., 2009.8.5, Vibranovski et al., 2009)
K81
(Presgraves, 2005, Loppin et al., 2005, Loppin et al., 2000, Fitch et al., 1998, Karr et al., 2007, Vibranovski et al., 2009, Dubruille et al., 2010)
ms(3)97Dg
(Knibb et al., 1993)
ms(3)k81
(Fuller, 1993, Gao et al., 2011)
ms(3)K81
(Karr et al., 2007, Haigh and Lloyd, 2007, Karr and Heath, 2008, Erickson and Quintero, 2007, Vibranovski et al., 2009, Orsi et al., 2010, Dubruille et al., 2010, Ohsako et al., 2003, Langley et al., 2011, Japanese National Institute of Genetics, 2012.5.21)
ph
(Foe et al., 1993, )
Name Synonym
male sterile (3) K81
 
paternal-haploid
 
paternal haploid
 
Secondary FlyBase IDs
  • FBgn0039460
hide References ( 47 )
Generate a list of
List References by type
hide Recent research papers ( 2 )
Gao et al., 2011, Proc. Natl. Acad. Sci. U.S.A. 108(12): 4932--4937
Paternal imprint essential for the inheritance of telomere identity in Drosophila. [FBrf0213318]
Langley et al., 2011, Genetics 188(2): 239--246
Circumventing Heterozygosity: Sequencing the Amplified Genome of a Single Haploid Drosophila melanogaster Embryo. [FBrf0213863]
Show all research papers ...
hide Recent reviews (0)
All reviews listed in FlyBase were published before 2011
Show reviews ...