A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene Dmel\Acp26Aa

General Information
SymbolDmel\Acp26AaSpeciesD. melanogaster
NameAccessory gland protein 26AaAnnotation symbolCG8982
Feature typeprotein_coding_geneFlyBase IDFBgn0002855
Gene Model StatusCurrent Stock availability 2 publicly available
Also Known AsMst26Aa, Acp26A, Ovulin, Acp26Aab, Mst26A, mst 355a
Genomic Location
Chromosome (arm)2LRecombination map
Cytogenetic map26A1-26A1Sequence location2L:5,892,883..5,893,896 [-]

Genomic Maps

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Automatically generated summary

See sections below for more information
The gene Accessory gland protein 26Aa is referred to in FlyBase by the symbol Dmel\Acp26Aa (CG8982, FBgn0002855). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: identical protein binding. There is experimental evidence that it is involved in the biological process: ovulation; multicellular organism reproduction. 28 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Male Drosophila accessory gland secretory protein. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of no expression detected. Peak expression observed in adult male stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult male accessory gland. Comments on Affy2 ProbeSet: ProbeSet 1638714_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of Acp26Aa. Gene sequence location is 2L:5892883..5893896.

User Contributed Data
hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
Mst26Aa
Expressed in males. but not in females; also expressed in the germ-cell-free sons of tud females as well as in XX individuals that are homozygous for dsx, ix, tra2, or tra. 1986, Presence of tra2+ activity in XX flies during a part of the third larval instar is sufficient to repress expression of Mst26Aa and prevent accessory-gland development; absence of tra2+ activity during that period leads to accessory-gland formation and the production of Mst26Aa transcript.
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Description
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FB2013_03
FB2013_02
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FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
26A1-26A1  
Limits computationally determined from genome sequence between P{lacW}l(2)k06502k06502 and P{EP}bchsEP2299&P{EP}GpdhEP466  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
26A-26A  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\Acp26Aa for information on other features GBrowse View Help
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0079156 FBtr0079157 FBtr0342618 FBtr0079155 FBpp0078787 FBpp0078788 FBpp0309554 FBpp0078786
Comments on Gene Model
Gene model reviewed during 5.51
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0079155
  958
  264
Additional Transcript Data & Comments
Reported size (kB)
0.9 (northern blot)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0078786  
29.6  
264  
9.31  
Additional Polypeptide Data & Comments
Reported size (kDa)
264 (aa); 41, 37, 36 (kD observed); 29 (kD predicted)
41, 37, 33, 30, 28, 25 (kD observed)
29, 22 (kD observed)
Comments
Generated from the 30kD species by an N-terminal cleavage step in the female genital tract.
This putative cleavage product was not detected. It is thought to be generated from the 41kD product by an N-terminal cleavage step in the female genital tract.
The 41kD, 37kD and 36kD forms of Acp26Aa protein differ in the extent of glycosylation. The 36kD species is far less abundant than the other two. By tracking with region-specific antibodies, it was shown that the 41kD species is processed to 38kD, 33kD and finally to 28kD while the 37kD species is processed to 33kD, 30kD and finally 25kD in parallel processing pathways. These processing steps were shown to consist of stepwise cleavage events in the N-terminal half of the protein. The processing sites were mapped by CNBr mapping and by analysis of conserved cleav ge sites within several Drosophila species. Finally, it was found that accessory gland main cell secretions are necessary to process Acp26Aa protein in the female genital tract.
Three forms of Acp26Aa protein are present in the male accessory gland, 36, 37, and 41kD. The 37kD is the most abundant. This is cleaved to 30kD in the female genital tract by the end of mating. There may be a 33kD intermediate.
Generated from a 33kD species by an N-terminal cleavage step in the female genital tract.
Generated from the 37kD species by an N-terminal cleavage step in the female genital tract.
The 41kD, 37kD and 36kD forms of Acp26Aa protein differ in the extent of glycosylation. The 36kD species is far less abundant than the other two. By tracking with region-specific antibodies, it was shown that the 41kD species is processed to 38kD, 33kD and finally to 28kD while the 37kD species is processed to 33kD, 30kD and finally 25kD in parallel processing pathways. These processing steps were shown to consist of stepwise cleavage events in the N-terminal half of the protein. The processing sites were mapped by CNBr mapping and by analysis of conservated cle vage sites within several Drosophila species. Finally, it was found that accessory gland main cell secretions are necessary to process Acp26Aa protein in the female genital tract.
Thought to be generated from a putative 38kD product by an N-terminal cleavage step in the female genital tract.
Antibodies were prepared against the carboxy-terminal portion of the protein (amino acids 250-264), the amino terminus (amino acids 1-64) and the middle (amino acids 76-121).
Acp26Aa protein was found to contain carbohydrates.
Acp26Aa protein contains a signal sequence and 5 pairs of basic amino acids that may be sites of specific peptidase cleavage. It is thought to be a secreted protein which is glycosylated and cleaved into smaller peptides. Results show that it is transferred to the female genital tract upon mating. One stretch of the Acp26Aa amino acid sequence is similar to the Aplysia egg-laying hormone (11 or 17 amino acids identical).
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
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DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
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Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
EPD - Eukarytoic Promoter Database, an annotated collection of POL II promoters
hide Expression Data
hideTranscript Expression
northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Acp26Aa transcripts were assayed in hand-sorted staged pupae. They are first detected at pupal stage 13. They are present at adult levels by one day after eclosion and persist at these levels for at least 10 days. Determination of expression occurs during the third larval instar which correlates with the time of determination of the accessory glands.
Acp26Aa transcripts are detected in RNA from adult males and specifically in accessory gland RNA.
Marker for
Subcellular Localization
CV Term
hide Polypeptide Expression
No Assay Recorded
Stage
Tissue/Position (including subcellular localization)
Reference
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
western blot
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
The 30kD processed form of Acp26Aa protein is the major form in the female genital tract by the end of mating.
Acp26Aa protein is not detectable in stage P13 pupae but is detectable in accessory glands dissected from adult males 3-4 hours after eclosion. Levels reach a plateau about 3-5 days after eclosion. Levels remain high in accessory gland secretions, even in 30 day old virgin males. Staining is present in both the main cells and the secondary cells. In 5 day and older virgin males, protein is absent in the main cells but is present in the secondary cells where it is concentrated in large vesicles. Abundance of Acp26Ab protein is stimula ed by copulation. Acp26Aa protein is detected in the female genital tract 10 minutes after the start of copulation as well as in the hemolymph. Levels in the hemolymph decrease with time. It is still detected at 6 hours but not at 24 hours after copulation. In the female genital tract, it is present as a 30kD processed form by the end of copulation. By 30 minutes after the end of copulation, it is found predominantly as a 25kD form. Less abundant 33kD and 28kD bands may be further processing intermediates. By 2 hours, only the 25kD form is detected. It is still detected by 3 hours but not t 4 hours after copulation. Protein was not detected in any other tissue examined. The 25kD form was shown to contain the ELH-similar region of the protein.
The 25kD processed form of Acp26Aa protein is the major form in the female genital tract 30 minutes after mating, and by 2 hours, it is the only form detected.
The processed forms of Acp26Aa protein are detected in the female genital tract.
The processed forms of Acp26Aa protein are detected in the female genital tract.
The processed forms of Acp26Aa protein are detected in the female genital tract.
The processed forms of Acp26Aa protein are detected in the female genital tract.
The processed forms of Acp26Aa protein are detected in the female genital tract.
Marker for
Subcellular Localization (GO Cellular Component)
CV term
References
hide Expression Deduced from Reporters
hide High-Throughput Expression Data
Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
hide FlyAtlas Anatomy Microarray

FlyAtlas Anatomical Expression Data

(FlyAtlas-RNA.adult)

(FlyAtlas-RNA.larva)


   Styles
   Scales

Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult male accessory gland.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (>999.999)

Linear, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 0.85
Larval Midgut
 
 3.8
Larval Hindgut
 
 1.6
Larval Malpighian Tubules
 
 3.4
Larval Fat Body
 
 1.9
Larval Salivary Gland
 
 5
Larval Trachea
 
 0.775
Larval Carcass
 
 2.675
Adult Head
 
 0.5
Adult Eye
 
 1.175
Adult Brain
 
 1.9
Adult Thoracic-Abdominal Ganglion
 
 4.3
Adult Crop
 
 4.7
Adult Midgut
 
 4.6
Adult Hindgut
 
 3.5
Adult Malpighian Tubules
 
 3.7
Adult Fat Body
 
 3.3
Adult Salivary Gland
 
 9.8
Adult Heart
 
 0.8
Adult VirginFemale Spermatheca
 
 4.4
Adult InseminatedFemale Spermatheca
 
 4.8
Adult Ovary
 
 3.7
Adult Testis
 
 68.6
Adult Male Accessory Gland
 
 11583.4
Adult Carcass
 
 60.1
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 0.85
Larval Midgut
 
 3.8
Larval Hindgut
 
 1.6
Larval Malpighian Tubules
 
 3.4
Larval Fat Body
 
 1.9
Larval Salivary Gland
 
 5
Larval Trachea
 
 0.775
Larval Carcass
 
 2.675
Adult Head
 
 0.5
Adult Eye
 
 1.175
Adult Brain
 
 1.9
Adult Thoracic-Abdominal Ganglion
 
 4.3
Adult Crop
 
 4.7
Adult Midgut
 
 4.6
Adult Hindgut
 
 3.5
Adult Malpighian Tubules
 
 3.7
Adult Fat Body
 
 3.3
Adult Salivary Gland
 
 9.8
Adult Heart
 
 0.8
Adult VirginFemale Spermatheca
 
 4.4
Adult InseminatedFemale Spermatheca
 
 4.8
Adult Ovary
 
 3.7
Adult Testis
 
 68.6
Adult Male Accessory Gland
 (11583.4)
Adult Carcass
 
 60.1
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 0.85
Larval Midgut
 
 3.8
Larval Hindgut
 
 1.6
Larval Malpighian Tubules
 
 3.4
Larval Fat Body
 
 1.9
Larval Salivary Gland
 
 5
Larval Trachea
 
 0.775
Larval Carcass
 
 2.675
Adult Head
 
 0.5
Adult Eye
 
 1.175
Adult Brain
 
 1.9
Adult Thoracic-Abdominal Ganglion
 
 4.3
Adult Crop
 
 4.7
Adult Midgut
 
 4.6
Adult Hindgut
 
 3.5
Adult Malpighian Tubules
 
 3.7
Adult Fat Body
 
 3.3
Adult Salivary Gland
 
 9.8
Adult Heart
 
 0.8
Adult VirginFemale Spermatheca
 
 4.4
Adult InseminatedFemale Spermatheca
 
 4.8
Adult Ovary
 
 3.7
Adult Testis
 
 68.6
Adult Male Accessory Gland
 (11583.4)
Adult Carcass
 
 60.1
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 0.85
Larval Midgut
 
 3.8
Larval Hindgut
 
 1.6
Larval Malpighian Tubules
 
 3.4
Larval Fat Body
 
 1.9
Larval Salivary Gland
 
 5
Larval Trachea
 
 0.775
Larval Carcass
 
 2.675
Adult Head
 
 0.5
Adult Eye
 
 1.175
Adult Brain
 
 1.9
Adult Thoracic-Abdominal Ganglion
 
 4.3
Adult Crop
 
 4.7
Adult Midgut
 
 4.6
Adult Hindgut
 
 3.5
Adult Malpighian Tubules
 
 3.7
Adult Fat Body
 
 3.3
Adult Salivary Gland
 
 9.8
Adult Heart
 
 0.8
Adult VirginFemale Spermatheca
 
 4.4
Adult InseminatedFemale Spermatheca
 
 4.8
Adult Ovary
 
 3.7
Adult Testis
 
 68.6
Adult Male Accessory Gland
 
 11583.4
Adult Carcass
 
 60.1
Expression Level Scale
 Very high 
log, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 0.85
Larval Midgut
 
 3.8
Larval Hindgut
 
 1.6
Larval Malpighian Tubules
 
 3.4
Larval Fat Body
 
 1.9
Larval Salivary Gland
 
 5
Larval Trachea
 
 0.775
Larval Carcass
 
 2.675
Adult Head
 
 0.5
Adult Eye
 
 1.175
Adult Brain
 
 1.9
Adult Thoracic-Abdominal Ganglion
 
 4.3
Adult Crop
 
 4.7
Adult Midgut
 
 4.6
Adult Hindgut
 
 3.5
Adult Malpighian Tubules
 
 3.7
Adult Fat Body
 
 3.3
Adult Salivary Gland
 
 9.8
Adult Heart
 
 0.8
Adult VirginFemale Spermatheca
 
 4.4
Adult InseminatedFemale Spermatheca
 
 4.8
Adult Ovary
 
 3.7
Adult Testis
 
 68.6
Adult Male Accessory Gland
 
 11583.4
Adult Carcass
 
 60.1
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 0.85
Larval Midgut
 
 3.8
Larval Hindgut
 
 1.6
Larval Malpighian Tubules
 
 3.4
Larval Fat Body
 
 1.9
Larval Salivary Gland
 
 5
Larval Trachea
 
 0.775
Larval Carcass
 
 2.675
Adult Head
 
 0.5
Adult Eye
 
 1.175
Adult Brain
 
 1.9
Adult Thoracic-Abdominal Ganglion
 
 4.3
Adult Crop
 
 4.7
Adult Midgut
 
 4.6
Adult Hindgut
 
 3.5
Adult Malpighian Tubules
 
 3.7
Adult Fat Body
 
 3.3
Adult Salivary Gland
 
 9.8
Adult Heart
 
 0.8
Adult VirginFemale Spermatheca
 
 4.4
Adult InseminatedFemale Spermatheca
 
 4.8
Adult Ovary
 
 3.7
Adult Testis
 
 68.6
Adult Male Accessory Gland
 (11583.4)
Adult Carcass
 
 60.1
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 0.85
Larval Midgut
 
 3.8
Larval Hindgut
 
 1.6
Larval Malpighian Tubules
 
 3.4
Larval Fat Body
 
 1.9
Larval Salivary Gland
 
 5
Larval Trachea
 
 0.775
Larval Carcass
 
 2.675
Adult Head
 
 0.5
Adult Eye
 
 1.175
Adult Brain
 
 1.9
Adult Thoracic-Abdominal Ganglion
 
 4.3
Adult Crop
 
 4.7
Adult Midgut
 
 4.6
Adult Hindgut
 
 3.5
Adult Malpighian Tubules
 
 3.7
Adult Fat Body
 
 3.3
Adult Salivary Gland
 
 9.8
Adult Heart
 
 0.8
Adult VirginFemale Spermatheca
 
 4.4
Adult InseminatedFemale Spermatheca
 
 4.8
Adult Ovary
 
 3.7
Adult Testis
 
 68.6
Adult Male Accessory Gland
 (11583.4)
Adult Carcass
 
 60.1
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 0.85
Larval Midgut
 
 3.8
Larval Hindgut
 
 1.6
Larval Malpighian Tubules
 
 3.4
Larval Fat Body
 
 1.9
Larval Salivary Gland
 
 5
Larval Trachea
 
 0.775
Larval Carcass
 
 2.675
Adult Head
 
 0.5
Adult Eye
 
 1.175
Adult Brain
 
 1.9
Adult Thoracic-Abdominal Ganglion
 
 4.3
Adult Crop
 
 4.7
Adult Midgut
 
 4.6
Adult Hindgut
 
 3.5
Adult Malpighian Tubules
 
 3.7
Adult Fat Body
 
 3.3
Adult Salivary Gland
 
 9.8
Adult Heart
 
 0.8
Adult VirginFemale Spermatheca
 
 4.4
Adult InseminatedFemale Spermatheca
 
 4.8
Adult Ovary
 
 3.7
Adult Testis
 
 68.6
Adult Male Accessory Gland
 
 11583.4
Adult Carcass
 
 60.1
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 0.5
 
NA 
Eye
 
 1.175
 
NA 
Brain
 
 1.9
 
0.85 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 4.3
 
NA 
Crop
 
 4.7
 
3.8 
Midgut
 
 4.6
 
1.6 
Hindgut
 
 3.5
 
3.4 
Malpighian Tubules
 
 3.7
 
1.9 
Fat Body
 
 3.3
 
Salivary Gland
 
 9.8
 
NA 
Heart
 
 0.8
 
0.775 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 4.4
 
NA 
InseminatedFemale Spermatheca
 
 4.8
 
NA 
Ovary
 
 3.7
 
NA 
Testis
 
 68.6
 
NA 
Male Accessory Gland
 
 11583.4
 
2.675 
Carcass
 
 no informative data

FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 0
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 33
digestive system, 4-day adult
 
 15
digestive system, 20-day adult
 
 3
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 8
carcass, 4-day adult
 
 4
carcass, 20-day adult
 
 7
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 123
accessory gland, mated 4-day male
 
 2771
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Linear, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 0
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 (33)
digestive system, 4-day adult
 
 15
digestive system, 20-day adult
 
 3
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 8
carcass, 4-day adult
 
 4
carcass, 20-day adult
 
 7
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 (123)
accessory gland, mated 4-day male
 (2771)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 0
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 33
digestive system, 4-day adult
 
 15
digestive system, 20-day adult
 
 3
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 8
carcass, 4-day adult
 
 4
carcass, 20-day adult
 
 7
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 (123)
accessory gland, mated 4-day male
 (2771)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 0
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 33
digestive system, 4-day adult
 
 15
digestive system, 20-day adult
 
 3
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 8
carcass, 4-day adult
 
 4
carcass, 20-day adult
 
 7
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 123
accessory gland, mated 4-day male
 
 2771
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 0
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 33
digestive system, 4-day adult
 
 15
digestive system, 20-day adult
 
 3
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 8
carcass, 4-day adult
 
 4
carcass, 20-day adult
 
 7
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 123
accessory gland, mated 4-day male
 
 2771
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 0
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 (33)
digestive system, 4-day adult
 
 15
digestive system, 20-day adult
 
 3
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 8
carcass, 4-day adult
 
 4
carcass, 20-day adult
 
 7
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 (123)
accessory gland, mated 4-day male
 (2771)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 0
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 33
digestive system, 4-day adult
 
 15
digestive system, 20-day adult
 
 3
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 8
carcass, 4-day adult
 
 4
carcass, 20-day adult
 
 7
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 123
accessory gland, mated 4-day male
 (2771)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 0
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 33
digestive system, 4-day adult
 
 15
digestive system, 20-day adult
 
 3
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 8
carcass, 4-day adult
 
 4
carcass, 20-day adult
 
 7
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 123
accessory gland, mated 4-day male
 
 2771
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 
central nervous system, larvae L3
 
 
central nervous system, pupae P8
 
 
head, virgin 1-day female
 
 
head, virgin 4-day female
 
 
head, virgin 20-day female
 
 
head, mated 1-day female
 
 
head, mated 4-day female
 
 
head, mated 20-day female
 
 
head, mated 1-day male
 
 
head, mated 4-day male
 
 
head, mated 20-day male
 
 
salivary gland, larvae L3 wandering
 
 
salivary gland, white prepupae
 
 
digestive system, larvae L3 wandering
 
 
digestive system, 1-day adult
 
 
digestive system, 4-day adult
 
 
digestive system, 20-day adult
 
 
fat body, larvae L3 wandering
 
 
fat body, white prepupae
 
 
fat body, pupae P8
 
 
carcass, larvae L3 wandering
 
 
carcass, 1-day adult
 
 
carcass, 4-day adult
 
 
carcass, 20-day adult
 
 
ovary, virgin 4-day female
 
 
ovary, mated 4-day female
 
 
testis, mated 4-day male
 
 
accessory gland, mated 4-day male
 
 

hide modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)


   Styles
   Scales

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of no expression detected. Peak expression observed in adult male stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 0
embryo 16-18hr
 
 0
embryo 18-20hr
 
 0
embryo 20-22hr
 
 0
embryo 22-24hr
 
 0
larva L1
 
 0
larva L2
 
 0
larva L3 12hr old
 
 0
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 0
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 0
white prepupae 12hr
 
 0
white prepupae 24hr
 
 0
pupae 2d postWPP
 
 0
pupae 3d postWPP
 
 0
pupae 4d postWPP
 
 10
adult male 01day
 
 239
adult male 05day
 
 208
adult male 30day
 
 101
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 0
embryo 16-18hr
 
 0
embryo 18-20hr
 
 0
embryo 20-22hr
 
 0
embryo 22-24hr
 
 0
larva L1
 
 0
larva L2
 
 0
larva L3 12hr old
 
 0
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 0
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 0
white prepupae 12hr
 
 0
white prepupae 24hr
 
 0
pupae 2d postWPP
 
 0
pupae 3d postWPP
 
 0
pupae 4d postWPP
 
 10
adult male 01day
 (239)
adult male 05day
 (208)
adult male 30day
 (101)
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 0
embryo 16-18hr
 
 0
embryo 18-20hr
 
 0
embryo 20-22hr
 
 0
embryo 22-24hr
 
 0
larva L1
 
 0
larva L2
 
 0
larva L3 12hr old
 
 0
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 0
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 0
white prepupae 12hr
 
 0
white prepupae 24hr
 
 0
pupae 2d postWPP
 
 0
pupae 3d postWPP
 
 0
pupae 4d postWPP
 
 10
adult male 01day
 (239)
adult male 05day
 (208)
adult male 30day
 101
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 0
embryo 16-18hr
 
 0
embryo 18-20hr
 
 0
embryo 20-22hr
 
 0
embryo 22-24hr
 
 0
larva L1
 
 0
larva L2
 
 0
larva L3 12hr old
 
 0
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 0
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 0
white prepupae 12hr
 
 0
white prepupae 24hr
 
 0
pupae 2d postWPP
 
 0
pupae 3d postWPP
 
 0
pupae 4d postWPP
 
 10
adult male 01day
 
 239
adult male 05day
 
 208
adult male 30day
 
 101
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 0
embryo 16-18hr
 
 0
embryo 18-20hr
 
 0
embryo 20-22hr
 
 0
embryo 22-24hr
 
 0
larva L1
 
 0
larva L2
 
 0
larva L3 12hr old
 
 0
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 0
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 0
white prepupae 12hr
 
 0
white prepupae 24hr
 
 0
pupae 2d postWPP
 
 0
pupae 3d postWPP
 
 0
pupae 4d postWPP
 
 10
adult male 01day
 
 239
adult male 05day
 
 208
adult male 30day
 
 101
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 0
embryo 16-18hr
 
 0
embryo 18-20hr
 
 0
embryo 20-22hr
 
 0
embryo 22-24hr
 
 0
larva L1
 
 0
larva L2
 
 0
larva L3 12hr old
 
 0
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 0
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 0
white prepupae 12hr
 
 0
white prepupae 24hr
 
 0
pupae 2d postWPP
 
 0
pupae 3d postWPP
 
 0
pupae 4d postWPP
 
 10
adult male 01day
 (239)
adult male 05day
 (208)
adult male 30day
 (101)
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 0
embryo 16-18hr
 
 0
embryo 18-20hr
 
 0
embryo 20-22hr
 
 0
embryo 22-24hr
 
 0
larva L1
 
 0
larva L2
 
 0
larva L3 12hr old
 
 0
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 0
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 0
white prepupae 12hr
 
 0
white prepupae 24hr
 
 0
pupae 2d postWPP
 
 0
pupae 3d postWPP
 
 0
pupae 4d postWPP
 
 10
adult male 01day
 (239)
adult male 05day
 (208)
adult male 30day
 101
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 0
embryo 16-18hr
 
 0
embryo 18-20hr
 
 0
embryo 20-22hr
 
 0
embryo 22-24hr
 
 0
larva L1
 
 0
larva L2
 
 0
larva L3 12hr old
 
 0
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 0
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 0
white prepupae 12hr
 
 0
white prepupae 24hr
 
 0
pupae 2d postWPP
 
 0
pupae 3d postWPP
 
 0
pupae 4d postWPP
 
 10
adult male 01day
 
 239
adult male 05day
 
 208
adult male 30day
 
 101
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

modENCODE Temporal Expression Data (Graveley et al., 2011)
hide modENCODE Cell Lines RNA-Seq
hide modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 12
cold shock, 4-day adult
 
 8
heat shock, 4-day adult
 
 26
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 1
Cadmium 100 mM 48 hrs, 4-day adult
 
 2
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 3
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 26
Ethanol 2.5% 3 hrs, larvae L3
 
 27
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 9
Paraquat 5 mM 48 hrs, 4-day adult
 
 41
Paraquat 10 mM 48 hrs, 4-day adult
 
 25
Rotenone 2 μg 12 hrs, larvae L3
 
 1
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 12
cold shock, 4-day adult
 
 8
heat shock, 4-day adult
 26
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 1
Cadmium 100 mM 48 hrs, 4-day adult
 
 2
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 3
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 26
Ethanol 2.5% 3 hrs, larvae L3
 (27)
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 9
Paraquat 5 mM 48 hrs, 4-day adult
 (41)
Paraquat 10 mM 48 hrs, 4-day adult
 
 25
Rotenone 2 μg 12 hrs, larvae L3
 
 1
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 12
cold shock, 4-day adult
 
 8
heat shock, 4-day adult
 
 26
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 1
Cadmium 100 mM 48 hrs, 4-day adult
 
 2
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 3
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 26
Ethanol 2.5% 3 hrs, larvae L3
 
 27
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 9
Paraquat 5 mM 48 hrs, 4-day adult
 
 41
Paraquat 10 mM 48 hrs, 4-day adult
 
 25
Rotenone 2 μg 12 hrs, larvae L3
 
 1
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 12
cold shock, 4-day adult
 
 8
heat shock, 4-day adult
 
 26
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 1
Cadmium 100 mM 48 hrs, 4-day adult
 
 2
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 3
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 26
Ethanol 2.5% 3 hrs, larvae L3
 
 27
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 9
Paraquat 5 mM 48 hrs, 4-day adult
 
 41
Paraquat 10 mM 48 hrs, 4-day adult
 
 25
Rotenone 2 μg 12 hrs, larvae L3
 
 1
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 12
cold shock, 4-day adult
 
 8
heat shock, 4-day adult
 
 26
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 1
Cadmium 100 mM 48 hrs, 4-day adult
 
 2
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 3
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 26
Ethanol 2.5% 3 hrs, larvae L3
 
 27
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 9
Paraquat 5 mM 48 hrs, 4-day adult
 
 41
Paraquat 10 mM 48 hrs, 4-day adult
 
 25
Rotenone 2 μg 12 hrs, larvae L3
 
 1
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
log, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 12
cold shock, 4-day adult
 
 8
heat shock, 4-day adult
 26
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 1
Cadmium 100 mM 48 hrs, 4-day adult
 
 2
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 3
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 26
Ethanol 2.5% 3 hrs, larvae L3
 27
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 9
Paraquat 5 mM 48 hrs, 4-day adult
 (41)
Paraquat 10 mM 48 hrs, 4-day adult
 
 25
Rotenone 2 μg 12 hrs, larvae L3
 
 1
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 12
cold shock, 4-day adult
 
 8
heat shock, 4-day adult
 
 26
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 1
Cadmium 100 mM 48 hrs, 4-day adult
 
 2
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 3
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 26
Ethanol 2.5% 3 hrs, larvae L3
 
 27
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 9
Paraquat 5 mM 48 hrs, 4-day adult
 
 41
Paraquat 10 mM 48 hrs, 4-day adult
 
 25
Rotenone 2 μg 12 hrs, larvae L3
 
 1
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 12
cold shock, 4-day adult
 
 8
heat shock, 4-day adult
 
 26
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 1
Cadmium 100 mM 48 hrs, 4-day adult
 
 2
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 3
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 26
Ethanol 2.5% 3 hrs, larvae L3
 
 27
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 9
Paraquat 5 mM 48 hrs, 4-day adult
 
 41
Paraquat 10 mM 48 hrs, 4-day adult
 
 25
Rotenone 2 μg 12 hrs, larvae L3
 
 1
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Treatment   Expression Level
extended cold, 4-day adult
 
 
cold shock, 4-day adult
 
 
heat shock, 4-day adult
 
 
Cadmium 50 mM 6 hrs, larvae L3
 
 
Cadmium 50 mM 12 hrs, larvae L3
 
 
Cadmium 50 mM 48 hrs, 4-day adult
 
 
Cadmium 100 mM 48 hrs, 4-day adult
 
 
Copper 0.5 mM 12 hrs, larvae L3
 
 
Copper 15 mM 48 hrs, 4-day adult
 
 
Zinc 5 mM 12 hrs, larvae L3
 
 
Zinc 4.5 mM 48 hrs, 4-day adult
 
 
Ethanol 2.5% 3 hrs, larvae L3
 
 
Ethanol 5% 3 hrs, larvae L3
 
 
Ethanol 10% 3 hrs, larvae L3
 
 
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 
Paraquat 5 mM 48 hrs, 4-day adult
 
 
Paraquat 10 mM 48 hrs, 4-day adult
 
 
Rotenone 2 μg 12 hrs, larvae L3
 
 
Rotenone 8 μg 12 hrs, larvae L3
 
 

hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 15 )
For All Classical Alleles Show

Allele of Acp26AaClassMutagenStocksKnown lesion
Acp26Aa1amorphic allele - genetic evidence0 Yes
Acp26Aa20 Yes
Acp26Aa30 Yes
Acp26Aa4
0 --
Acp26Aa5
0 --
Acp26AaNC100 --
Acp26AaNC10 --
Acp26AaNC20 --
Acp26AaNC30 --
Acp26AaNC40 --
Acp26AaNC50 --
Acp26AaNC60 --
Acp26AaNC70 --
Acp26AaNC80 --
Acp26AaNC90 --
hide Alleles Carried on Transgenic Constructs ( 13 )
For All Alleles Carried on Transgenic Constructs Show

Allele of Acp26AaClassMutagenStocksKnown lesion
Acp26AaGD52502 Yes
Acp26Aa1-120.Scer\UAS0 Yes
Acp26Aa1-138.Scer\UAS0 Yes
Acp26Aa1-154.Scer\UAS0 Yes
Acp26Aa1-166.Scer\UAS0 Yes
Acp26Aa118-166.Scer\UAS0 Yes
Acp26AaCP1.Scer\UAS0 Yes
Acp26AaCP2.Scer\UAS0 Yes
Acp26AaCP3C.Scer\UAS0 Yes
Acp26AaCP3N.Scer\UAS0 Yes
Acp26AaNIG.8982R0 Yes
Acp26AaScer\UAS.cPa0 Yes
Acp26AaT:Avic\GFP0 Yes
hide Aneuploid Aberrations
Disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
reporter construct
characterization construct
Insertions
Type of insertions
Name
Expression data
hide Gene Ontology: Function, Process & Cellular Component ( 11 unique terms )
hide Terms Based on Experimental Evidence ( 4 terms )
Molecular Function
CV term
References
inferred from physical interaction with Acp26Aa
Biological Process
CV term
References
inferred from mutant phenotype
Cellular Component
CV term
References
hide Terms Based on Predictions or Assertions ( 9 terms )
Molecular Function
CV term
References
non-traceable author statement
Biological Process
CV term
References
inferred from electronic annotation with InterPro:IPR004315
non-traceable author statement
traceable author statement
traceable author statement
Cellular Component
CV term
References
inferred from sequence model
non-traceable author statement
inferred from sequence model
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
Acp26Aa allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
hide OrthoDB Orthologs (5) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
No orthologs identified
Insect inclusive ortholog search
No orthologs identified
Arthropod inclusive ortholog search
No orthologs identified
Metazoa inclusive ortholog search
No orthologs identified
hideOrthologs in Drosophila Species (EOG67H69B)
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly 
 
 
Drosophila simulans
 
Y
 
Drosophila sechellia
 
Y
 
Drosophila erecta
 
Y
 
Drosophila yakuba
 
Y
 
Orthologs in non-Drosophila Dipterans (None identified)
No non-Drosophilid orthologies identified
Orthologs in non-Dipteran Insects (None identified)
No non-Dipteran orthologies identified
Orthologs in non-Insect Arthropods (None identified)
No non-Insect Arthropod orthologies identified
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
hide Human Orthologs (0)
Gene
OMIM
HGNC
hideAAA Orthologs (4) based on analysis using Dmel annotation version 4.3
Organism
Gene
Drosophila simulans
Drosophila sechellia
Drosophila erecta
Drosophila yakuba
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 2 )
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 5 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
hide Other Comments
If females remate frequently relative to the duration of sperm storage and rate of sperm use, sperm displacement may be an important component of male reproductive success. Significant association has been found between Acp26Aa mutant male sperm and the ability to resist displacement by subsequent sperm. There is no correlation between the ability to displace resident sperm and the ability to resist being displaced by subsequent sperm, this lack of correlation suggests that different mechanisms mediate that the two components of sperm displacement.
Acp26Aa contributes to the initial (first day postmating) stimulation of egg laying in the mated female.
The Acp26Aa product is transferred to the female from the male during mating, and is processed in the female genital tract. Processing involves sequential proteolytic cleavage which is dependent on activities donated by the male.
It is demonstrated that Acp26Aa and Acp26Ab are separate mRNAs using a reverse transcription polymerase chain reaction assay and reporter gene fusions. Regulatory elements for Acp26Ab lie within a fragment containing the intergenic region and transcribed sequences of Acp26Aa and Acp26Ab.
Sequence and restriction map polymorphism have been studied in 10 isogenic lines of D.melanogaster, and one line each of D.sechellia, D.mauritiana and D.simulans: pattern suggests selection in or near Acp26Aa region has played a part in the history of these genes.
Expressed in males, not females. Presence of tra2+ activity in XX flies during a part of the third larval instar is sufficient to repress expression of Acp26Aa and prevent accessory-gland formation and the production of Acp26Aa transcript.
The developmental and mating-stimulated expression of Acp26Aa, and the transfer of the protein product to and fates in the mated female has been studied.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
EPD - Eukarytoic Promoter Database, an annotated collection of POL II promoters
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
hide Synonyms & Secondary IDs ( 18 )
Reported As
Symbol Synonym
msP355a
 
Name Synonym
Accessory gland peptide 26Aa
Accessory gland protein 26Aa
 
accessory gland-specific peptide 26Aa
Accessory gland-specific peptide 26Aa
Secondary FlyBase IDs
hide References ( 146 )
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List References by type
hide Recent research papers ( 9 )
Zhang et al., 2013, Mol. Ecol. 22(5): 1400--1415
Natural genetic variation in male reproductive genes contributes to nontransitivity of sperm competitive ability in Drosophila melanogaster. [FBrf0220937]
Fischer et al., 2012, Proc. Biol. Sci. 279(1738): 2636--2644
Conserved properties of Drosophila and human spermatozoal mRNA repertoires. [FBrf0218415]
Laflamme et al., 2012, PLoS Genet. 8(1): e1002435
The Drosophila melanogaster Seminal Fluid Protease "Seminase" Regulates Proteolytic and Post-Mating Reproductive Processes. [FBrf0217192]
Lee and Reinhardt, 2012, Genome Biol. Evol. 4(4): 533--549
Widespread Polymorphism in the Positions of Stop Codons in Drosophila melanogaster. [FBrf0218109]
Wong et al., 2012, Mol. Biol. Evol. 29(1): 229--238
Temporally variable selection on proteolysis-related reproductive tract proteins in Drosophila. [FBrf0217443]
Baycin-Hizal et al., 2011, J. Proteome Res. 10(6): 2777--2784
GlycoFly: A Database of Drosophila N-linked Glycoproteins Identified Using SPEG-MS Techniques. [FBrf0213834]
Dottorini et al., 2011, BMC Bioinformatics 12: 34
Gepoclu: a software tool for identifying and analyzing gene positional clusters in large-scale gene expression analysis. [FBrf0214379]
Fedorka et al., 2011, Evolution 65(2): 584--590
Perceived sperm competition intensity influences seminal fluid protein production prior to courtship and mating. [FBrf0212865]
Sirot et al., 2011, Proc. Natl. Acad. Sci. U.S.A. 108(24): 9922--9926
Protein-specific manipulation of ejaculate composition in response to female mating status in Drosophila melanogaster. [FBrf0214264]
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All reviews listed in FlyBase were published before 2011