A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\nec

General Information
SymbolDmel\necSpeciesD. melanogaster
NamenecroticAnnotation symbolCG1857
Feature typeprotein_coding_geneFlyBase IDFBgn0002930
Gene Model StatusCurrent Stock availability 8 publicly available
Also Known AsSpn43Ac, SER3
Genomic Location
Chromosome (arm)2RRecombination map
Cytogenetic map42F3-42F3Sequence location2R:3,043,981..3,045,733 [-]

Genomic Maps

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modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene necrotic is referred to in FlyBase by the symbol Dmel\nec (CG1857, FBgn0002930). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: serine-type endopeptidase inhibitor activity. There is experimental evidence that it is involved in the biological process: immune response; negative regulation of Toll signaling pathway; antifungal humoral response; regulation of proteolysis. 35 alleles are reported. The phenotypes of these alleles are annotated with: adult epidermis; adult cuticle; adult integumentary system; adult abdomen; joint. It has one annotated transcript and one annotated polypeptide. Protein features are: Protease inhibitor I4, serpin; Protease inhibitor I4, serpin, conserved site; Serpin domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression. Peak expression observed at stages throughout the pupal period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, adult crop, adult heart, larval/adult fat body, adult spermathecae, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult central nervous system, larval/adult hindgut. Comments on Affy2 ProbeSet: ProbeSet 1636653_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of nec. Gene sequence location is 2R:3043981..3045733.

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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2011_10
FB2012_01
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
42F3-42F3  
Limits computationally determined from genome sequence between P{lacW}vimark16722 and P{lacW}cosk16101  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
43A1-43A2  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\nec for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0089042 FBtr0089053 FBtr0089052 FBpp0088113 FBpp0088124 FBpp0088123
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0089052
  1621
  476
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
nec-PA  
FBpp0088123  
53.7  
476  
7.41  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view pk-RA nec-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0002930


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0002930
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression. Peak expression observed at stages throughout the pupal period, in stages of adults of both sexes.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0002930 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 7
embryo 02-04hr
 
 11
embryo 04-06hr
 
 31
embryo 06-08hr
 
 95
embryo 08-10hr
 
 145
embryo 10-12hr
 
 558
embryo 12-14hr
 
 716
embryo 14-16hr
 
 912
embryo 16-18hr
 
 1019
embryo 18-20hr
 
 3333
embryo 20-22hr
 
 3750
embryo 22-24hr
 
 2609
larva L1
 
 1286
larva L2
 
 1627
larva L3 12hr old
 
 2876
larva L3 puffstage 1-2
 
 2717
larva L3 puffstage 3-6
 
 2980
larva L3 puffstage 7-9
 
 1513
white prepupae new
 
 1504
white prepupae 12hr
 
 6691
white prepupae 24hr
 
 3629
pupae 2d postWPP
 
 3448
pupae 3d postWPP
 
 1926
pupae 4d postWPP
 
 9100
adult male 01day
 
 6690
adult male 05day
 
 6652
adult male 30day
 
 6586
adult female 01day
 
 4073
adult female 05day
 
 2498
adult female 30day
 
 4346
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 7
embryo 02-04hr
 
 11
embryo 04-06hr
 
 31
embryo 06-08hr
 
 95
embryo 08-10hr
 (145)
embryo 10-12hr
 (558)
embryo 12-14hr
 (716)
embryo 14-16hr
 (912)
embryo 16-18hr
 (1019)
embryo 18-20hr
 (3333)
embryo 20-22hr
 (3750)
embryo 22-24hr
 (2609)
larva L1
 (1286)
larva L2
 (1627)
larva L3 12hr old
 (2876)
larva L3 puffstage 1-2
 (2717)
larva L3 puffstage 3-6
 (2980)
larva L3 puffstage 7-9
 (1513)
white prepupae new
 (1504)
white prepupae 12hr
 (6691)
white prepupae 24hr
 (3629)
pupae 2d postWPP
 (3448)
pupae 3d postWPP
 (1926)
pupae 4d postWPP
 (9100)
adult male 01day
 (6690)
adult male 05day
 (6652)
adult male 30day
 (6586)
adult female 01day
 (4073)
adult female 05day
 (2498)
adult female 30day
 (4346)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 7
embryo 02-04hr
 
 11
embryo 04-06hr
 
 31
embryo 06-08hr
 
 95
embryo 08-10hr
 
 145
embryo 10-12hr
 
 558
embryo 12-14hr
 
 716
embryo 14-16hr
 
 912
embryo 16-18hr
 
 1019
embryo 18-20hr
 (3333)
embryo 20-22hr
 (3750)
embryo 22-24hr
 (2609)
larva L1
 
 1286
larva L2
 (1627)
larva L3 12hr old
 (2876)
larva L3 puffstage 1-2
 (2717)
larva L3 puffstage 3-6
 (2980)
larva L3 puffstage 7-9
 (1513)
white prepupae new
 1504
white prepupae 12hr
 (6691)
white prepupae 24hr
 (3629)
pupae 2d postWPP
 (3448)
pupae 3d postWPP
 (1926)
pupae 4d postWPP
 (9100)
adult male 01day
 (6690)
adult male 05day
 (6652)
adult male 30day
 (6586)
adult female 01day
 (4073)
adult female 05day
 (2498)
adult female 30day
 (4346)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 7
embryo 02-04hr
 
 11
embryo 04-06hr
 
 31
embryo 06-08hr
 
 95
embryo 08-10hr
 
 145
embryo 10-12hr
 
 558
embryo 12-14hr
 
 716
embryo 14-16hr
 
 912
embryo 16-18hr
 
 1019
embryo 18-20hr
 
 3333
embryo 20-22hr
 
 3750
embryo 22-24hr
 
 2609
larva L1
 
 1286
larva L2
 
 1627
larva L3 12hr old
 
 2876
larva L3 puffstage 1-2
 
 2717
larva L3 puffstage 3-6
 
 2980
larva L3 puffstage 7-9
 
 1513
white prepupae new
 
 1504
white prepupae 12hr
 
 6691
white prepupae 24hr
 
 3629
pupae 2d postWPP
 
 3448
pupae 3d postWPP
 
 1926
pupae 4d postWPP
 
 9100
adult male 01day
 
 6690
adult male 05day
 
 6652
adult male 30day
 
 6586
adult female 01day
 
 4073
adult female 05day
 
 2498
adult female 30day
 
 4346
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 7
embryo 02-04hr
 
 11
embryo 04-06hr
 
 31
embryo 06-08hr
 
 95
embryo 08-10hr
 
 145
embryo 10-12hr
 
 558
embryo 12-14hr
 
 716
embryo 14-16hr
 
 912
embryo 16-18hr
 
 1019
embryo 18-20hr
 
 3333
embryo 20-22hr
 
 3750
embryo 22-24hr
 
 2609
larva L1
 
 1286
larva L2
 
 1627
larva L3 12hr old
 
 2876
larva L3 puffstage 1-2
 
 2717
larva L3 puffstage 3-6
 
 2980
larva L3 puffstage 7-9
 
 1513
white prepupae new
 
 1504
white prepupae 12hr
 
 6691
white prepupae 24hr
 
 3629
pupae 2d postWPP
 
 3448
pupae 3d postWPP
 
 1926
pupae 4d postWPP
 
 9100
adult male 01day
 
 6690
adult male 05day
 
 6652
adult male 30day
 
 6586
adult female 01day
 
 4073
adult female 05day
 
 2498
adult female 30day
 
 4346
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0002930 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 7
embryo 02-04hr
 
 11
embryo 04-06hr
 
 31
embryo 06-08hr
 
 95
embryo 08-10hr
 
 145
embryo 10-12hr
 
 558
embryo 12-14hr
 
 716
embryo 14-16hr
 
 912
embryo 16-18hr
 
 1019
embryo 18-20hr
 
 3333
embryo 20-22hr
 
 3750
embryo 22-24hr
 
 2609
larva L1
 
 1286
larva L2
 
 1627
larva L3 12hr old
 
 2876
larva L3 puffstage 1-2
 
 2717
larva L3 puffstage 3-6
 
 2980
larva L3 puffstage 7-9
 
 1513
white prepupae new
 
 1504
white prepupae 12hr
 
 6691
white prepupae 24hr
 
 3629
pupae 2d postWPP
 
 3448
pupae 3d postWPP
 
 1926
pupae 4d postWPP
 
 9100
adult male 01day
 
 6690
adult male 05day
 
 6652
adult male 30day
 
 6586
adult female 01day
 
 4073
adult female 05day
 
 2498
adult female 30day
 
 4346
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 7
embryo 02-04hr
 
 11
embryo 04-06hr
 
 31
embryo 06-08hr
 
 95
embryo 08-10hr
 (145)
embryo 10-12hr
 (558)
embryo 12-14hr
 (716)
embryo 14-16hr
 (912)
embryo 16-18hr
 (1019)
embryo 18-20hr
 (3333)
embryo 20-22hr
 (3750)
embryo 22-24hr
 (2609)
larva L1
 (1286)
larva L2
 (1627)
larva L3 12hr old
 (2876)
larva L3 puffstage 1-2
 (2717)
larva L3 puffstage 3-6
 (2980)
larva L3 puffstage 7-9
 (1513)
white prepupae new
 (1504)
white prepupae 12hr
 (6691)
white prepupae 24hr
 (3629)
pupae 2d postWPP
 (3448)
pupae 3d postWPP
 (1926)
pupae 4d postWPP
 (9100)
adult male 01day
 (6690)
adult male 05day
 (6652)
adult male 30day
 (6586)
adult female 01day
 (4073)
adult female 05day
 (2498)
adult female 30day
 (4346)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 7
embryo 02-04hr
 
 11
embryo 04-06hr
 
 31
embryo 06-08hr
 
 95
embryo 08-10hr
 
 145
embryo 10-12hr
 
 558
embryo 12-14hr
 
 716
embryo 14-16hr
 
 912
embryo 16-18hr
 
 1019
embryo 18-20hr
 (3333)
embryo 20-22hr
 (3750)
embryo 22-24hr
 (2609)
larva L1
 
 1286
larva L2
 1627
larva L3 12hr old
 (2876)
larva L3 puffstage 1-2
 (2717)
larva L3 puffstage 3-6
 (2980)
larva L3 puffstage 7-9
 1513
white prepupae new
 1504
white prepupae 12hr
 (6691)
white prepupae 24hr
 (3629)
pupae 2d postWPP
 (3448)
pupae 3d postWPP
 1926
pupae 4d postWPP
 (9100)
adult male 01day
 (6690)
adult male 05day
 (6652)
adult male 30day
 (6586)
adult female 01day
 (4073)
adult female 05day
 (2498)
adult female 30day
 (4346)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 7
embryo 02-04hr
 
 11
embryo 04-06hr
 
 31
embryo 06-08hr
 
 95
embryo 08-10hr
 
 145
embryo 10-12hr
 
 558
embryo 12-14hr
 
 716
embryo 14-16hr
 
 912
embryo 16-18hr
 
 1019
embryo 18-20hr
 
 3333
embryo 20-22hr
 
 3750
embryo 22-24hr
 
 2609
larva L1
 
 1286
larva L2
 
 1627
larva L3 12hr old
 
 2876
larva L3 puffstage 1-2
 
 2717
larva L3 puffstage 3-6
 
 2980
larva L3 puffstage 7-9
 
 1513
white prepupae new
 
 1504
white prepupae 12hr
 
 6691
white prepupae 24hr
 
 3629
pupae 2d postWPP
 
 3448
pupae 3d postWPP
 
 1926
pupae 4d postWPP
 
 9100
adult male 01day
 
 6690
adult male 05day
 
 6652
adult male 30day
 
 6586
adult female 01day
 
 4073
adult female 05day
 
 2498
adult female 30day
 
 4346
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 7
embryo 02-04hr
 
 11
embryo 04-06hr
 
 31
embryo 06-08hr
 
 95
embryo 08-10hr
 
 145
embryo 10-12hr
 
 558
embryo 12-14hr
 
 716
embryo 14-16hr
 
 912
embryo 16-18hr
 
 1019
embryo 18-20hr
 
 3333
embryo 20-22hr
 
 3750
embryo 22-24hr
 
 2609
larva L1
 
 1286
larva L2
 
 1627
larva L3 12hr old
 
 2876
larva L3 puffstage 1-2
 
 2717
larva L3 puffstage 3-6
 
 2980
larva L3 puffstage 7-9
 
 1513
white prepupae new
 
 1504
white prepupae 12hr
 
 6691
white prepupae 24hr
 
 3629
pupae 2d postWPP
 
 3448
pupae 3d postWPP
 
 1926
pupae 4d postWPP
 
 9100
adult male 01day
 
 6690
adult male 05day
 
 6652
adult male 30day
 
 6586
adult female 01day
 
 4073
adult female 05day
 
 2498
adult female 30day
 
 4346
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0002930


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0002930
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, adult crop, adult heart, larval/adult fat body, adult spermathecae, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult central nervous system, larval/adult hindgut.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0002930 expression level
Tissue   Expression Level
Larval Central Nervous System no informative data
Larval Midgut
 
 2.4
Larval Hindgut
 
 106.7
Larval Malpighian Tubules
 
 5.9
Larval Fat Body
 
 1114.9
Larval Salivary Gland no informative data
Larval Trachea
 
 42.425
Larval Carcass
 
 47.8
Adult Head
 
 1031.2
Adult Eye
 
 619.1
Adult Brain
 
 273
Adult Thoracic-Abdominal Ganglion
 
 335.8
Adult Crop
 
 587.7
Adult Midgut no informative data
Adult Hindgut
 
 419.1
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 1884.1
Adult Salivary Gland no informative data
Adult Heart
 
 1113.9
Adult VirginFemale Spermatheca
 
 1157.4
Adult InseminatedFemale Spermatheca
 
 883.6
Adult Ovary
 
 4
Adult Testis
 
 63.9
Adult Male Accessory Gland
 
 90.5
Adult Carcass
 
 1204.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System no informative data
Larval Midgut
 
 2.4
Larval Hindgut
 
 106.7
Larval Malpighian Tubules
 
 5.9
Larval Fat Body
 (1114.9)
Larval Salivary Gland no informative data
Larval Trachea
 
 42.425
Larval Carcass
 
 47.8
Adult Head
 (1031.2)
Adult Eye
 (619.1)
Adult Brain
 
 273
Adult Thoracic-Abdominal Ganglion
 
 335.8
Adult Crop
 (587.7)
Adult Midgut no informative data
Adult Hindgut
 
 419.1
Adult Malpighian Tubules no informative data
Adult Fat Body
 (1884.1)
Adult Salivary Gland no informative data
Adult Heart
 (1113.9)
Adult VirginFemale Spermatheca
 (1157.4)
Adult InseminatedFemale Spermatheca
 (883.6)
Adult Ovary
 
 4
Adult Testis
 
 63.9
Adult Male Accessory Gland
 
 90.5
Adult Carcass
 (1204.5)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System no informative data
Larval Midgut
 
 2.4
Larval Hindgut
 
 106.7
Larval Malpighian Tubules
 
 5.9
Larval Fat Body
 (1114.9)
Larval Salivary Gland no informative data
Larval Trachea
 
 42.425
Larval Carcass
 
 47.8
Adult Head
 1031.2
Adult Eye
 
 619.1
Adult Brain
 
 273
Adult Thoracic-Abdominal Ganglion
 
 335.8
Adult Crop
 
 587.7
Adult Midgut no informative data
Adult Hindgut
 
 419.1
Adult Malpighian Tubules no informative data
Adult Fat Body
 (1884.1)
Adult Salivary Gland no informative data
Adult Heart
 (1113.9)
Adult VirginFemale Spermatheca
 (1157.4)
Adult InseminatedFemale Spermatheca
 
 883.6
Adult Ovary
 
 4
Adult Testis
 
 63.9
Adult Male Accessory Gland
 
 90.5
Adult Carcass
 (1204.5)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System no informative data
Larval Midgut
 
 2.4
Larval Hindgut
 
 106.7
Larval Malpighian Tubules
 
 5.9
Larval Fat Body
 
 1114.9
Larval Salivary Gland no informative data
Larval Trachea
 
 42.425
Larval Carcass
 
 47.8
Adult Head
 
 1031.2
Adult Eye
 
 619.1
Adult Brain
 
 273
Adult Thoracic-Abdominal Ganglion
 
 335.8
Adult Crop
 
 587.7
Adult Midgut no informative data
Adult Hindgut
 
 419.1
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 1884.1
Adult Salivary Gland no informative data
Adult Heart
 
 1113.9
Adult VirginFemale Spermatheca
 
 1157.4
Adult InseminatedFemale Spermatheca
 
 883.6
Adult Ovary
 
 4
Adult Testis
 
 63.9
Adult Male Accessory Gland
 
 90.5
Adult Carcass
 
 1204.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0002930 expression level
Tissue   Expression Level
Larval Central Nervous System no informative data
Larval Midgut
 
 2.4
Larval Hindgut
 
 106.7
Larval Malpighian Tubules
 
 5.9
Larval Fat Body
 
 1114.9
Larval Salivary Gland no informative data
Larval Trachea
 
 42.425
Larval Carcass
 
 47.8
Adult Head
 
 1031.2
Adult Eye
 
 619.1
Adult Brain
 
 273
Adult Thoracic-Abdominal Ganglion
 
 335.8
Adult Crop
 
 587.7
Adult Midgut no informative data
Adult Hindgut
 
 419.1
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 1884.1
Adult Salivary Gland no informative data
Adult Heart
 
 1113.9
Adult VirginFemale Spermatheca
 
 1157.4
Adult InseminatedFemale Spermatheca
 
 883.6
Adult Ovary
 
 4
Adult Testis
 
 63.9
Adult Male Accessory Gland
 
 90.5
Adult Carcass
 
 1204.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System no informative data
Larval Midgut
 
 2.4
Larval Hindgut
 
 106.7
Larval Malpighian Tubules
 
 5.9
Larval Fat Body
 (1114.9)
Larval Salivary Gland no informative data
Larval Trachea
 
 42.425
Larval Carcass
 
 47.8
Adult Head
 (1031.2)
Adult Eye
 619.1
Adult Brain
 
 273
Adult Thoracic-Abdominal Ganglion
 
 335.8
Adult Crop
 587.7
Adult Midgut no informative data
Adult Hindgut
 
 419.1
Adult Malpighian Tubules no informative data
Adult Fat Body
 (1884.1)
Adult Salivary Gland no informative data
Adult Heart
 (1113.9)
Adult VirginFemale Spermatheca
 (1157.4)
Adult InseminatedFemale Spermatheca
 (883.6)
Adult Ovary
 
 4
Adult Testis
 
 63.9
Adult Male Accessory Gland
 
 90.5
Adult Carcass
 (1204.5)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System no informative data
Larval Midgut
 
 2.4
Larval Hindgut
 
 106.7
Larval Malpighian Tubules
 
 5.9
Larval Fat Body
 1114.9
Larval Salivary Gland no informative data
Larval Trachea
 
 42.425
Larval Carcass
 
 47.8
Adult Head
 1031.2
Adult Eye
 
 619.1
Adult Brain
 
 273
Adult Thoracic-Abdominal Ganglion
 
 335.8
Adult Crop
 
 587.7
Adult Midgut no informative data
Adult Hindgut
 
 419.1
Adult Malpighian Tubules no informative data
Adult Fat Body
 (1884.1)
Adult Salivary Gland no informative data
Adult Heart
 1113.9
Adult VirginFemale Spermatheca
 1157.4
Adult InseminatedFemale Spermatheca
 
 883.6
Adult Ovary
 
 4
Adult Testis
 
 63.9
Adult Male Accessory Gland
 
 90.5
Adult Carcass
 1204.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System no informative data
Larval Midgut
 
 2.4
Larval Hindgut
 
 106.7
Larval Malpighian Tubules
 
 5.9
Larval Fat Body
 
 1114.9
Larval Salivary Gland no informative data
Larval Trachea
 
 42.425
Larval Carcass
 
 47.8
Adult Head
 
 1031.2
Adult Eye
 
 619.1
Adult Brain
 
 273
Adult Thoracic-Abdominal Ganglion
 
 335.8
Adult Crop
 
 587.7
Adult Midgut no informative data
Adult Hindgut
 
 419.1
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 1884.1
Adult Salivary Gland no informative data
Adult Heart
 
 1113.9
Adult VirginFemale Spermatheca
 
 1157.4
Adult InseminatedFemale Spermatheca
 
 883.6
Adult Ovary
 
 4
Adult Testis
 
 63.9
Adult Male Accessory Gland
 
 90.5
Adult Carcass
 
 1204.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System no informative data
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland no informative data
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut no informative data
Adult Hindgut
 
 
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 
Adult Salivary Gland no informative data
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 1031.2
 
NA 
Eye
 
 619.1
 
NA 
Brain
 
 273
 
no informative data 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 335.8
 
NA 
Crop
 
 587.7
 
2.4 
Midgut
 
 no informative data
 
106.7 
Hindgut
 
 419.1
 
5.9 
Malpighian Tubules
 
 no informative data
 
1114.9 
Fat Body
 
 1884.1
 
no informative data 
Salivary Gland
 
 no informative data
 
NA 
Heart
 
 1113.9
 
42.425 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 1157.4
 
NA 
InseminatedFemale Spermatheca
 
 883.6
 
NA 
Ovary
 
 4
 
NA 
Testis
 
 63.9
 
NA 
Male Accessory Gland
 
 90.5
 
47.8 
Carcass
 
 1204.5

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
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FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
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hide Summary of Allele Phenotypes
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Allele
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Allele
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Allele
hide Classical Alleles ( 22 )
For All Classical Alleles Show

Allele of necClassMutagenStocksKnown lesion
nec10amorphic allele - genetic evidence2 Yes
nec1amorphic allele - genetic evidence1 Yes
nec2amorphic allele - genetic evidence1 Yes
necJR
1 --
nec11amorphic allele - genetic evidence0 --
nec12amorphic allele - genetic evidence0 --
nec13amorphic allele - genetic evidence0 --
nec4amorphic allele - genetic evidence0 --
nec6amorphic allele - genetic evidence0 --
nec7amorphic allele - genetic evidence0 Yes
nec8amorphic allele - genetic evidence0 --
nec9amorphic allele - genetic evidence0 Yes
nec150 --
nec160 Yes
nec170 --
nec180 --
nec190 Yes
nec200 Yes
nec220 Yes
necMtnA.T:SV5\V5,T:Zzzz\His6
0 Yes
necNpk0 --
necunspecified
0 --
hide Alleles Carried on Transgenic Constructs ( 13 )
For All Alleles Carried on Transgenic Constructs Show

Allele of necClassMutagenStocksKnown lesion
necGD52732 Yes
necKK1052061 Yes
nec+t7.00 Yes
nec1.Scer\UAS0 Yes
nec9.Scer\UAS0 Yes
necdsRNA.57-14730 Yes
necdsRNA.CopT.Scer\UAS0 Yes
necdsRNA.L.Scer\UAS0 Yes
necdsRNA.S.Scer\UAS0 Yes
necK68Q.K70Q.K71Q.Scer\UAS0 Yes
necPP.Scer\UAS0 Yes
necScer\UAS.cLa0 Yes
necSF.Scer\UAS0 Yes
hide Aneuploid Aberrations
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Not disrupted in
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Type of construct
Name
Expression data
characterization construct
Insertions
Type of insertions
Name
Expression data
hide Gene Ontology: Function, Process & Cellular Component ( 7 unique terms )
hide Terms Based on Experimental Evidence ( 5 terms )
Molecular Function
CV term
References
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CV term
References
inferred from genetic interaction with spz AND traceable author statement
inferred from expression pattern
inferred from direct assay
inferred from mutant phenotype
Cellular Component ( 0 terms)
hide Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term
References
inferred from sequence or structural similarity with EMBL:U58361
non-traceable author statement
Biological Process
CV term
References
non-traceable author statement
non-traceable author statement
traceable author statement
Cellular Component ( 0 terms)
hide Sequence Ontology: Class of Gene
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Interacts with
Please look at the allele data for full details of the genetic interactions
nec allele
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hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
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hide Stocks Listed in FlyBase ( 8 )
Bloomington
Kyoto
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 33 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
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cDNA Clones, End Sequenced (ESTs)
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DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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Source for database identity of
Source for database merge of
Source for merge of: nec anon-WO0118057.3
Source for merge of: nec CG1857
Additional comments
Source for merge of nec anon-WO0118057.3 was sequence comparison (date:030912).
hide Other Comments
The Tl-mediated immune response to fungal infections is constitutively activated in nec mutants and pleiotropic phenotypes include melanization and cellular necrosis.
nec negatively regulates the Tl signalling pathway.
nec has a role in Tl mediated antifungal defence.
Deletion mutants for all three serpins (Spn43Aa, Spn43Ab and nec) survive as adults for a short while before dying with an extreme nec phenotype.
The cellular polarity gene pk and the adult lethal nec gene map within the proximal region of pk-sple complex among a set of 3 Serpin transcripts.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 12 )
Reported As
Symbol Synonym
anon-WO0118057.3
 
Name Synonym
necrotic serpin
Serine protease inhibitor 3
Secondary FlyBase IDs
  • FBgn0024292
  • FBgn0028676
  • FBgn0033148
  • FBgn0063807
hide References ( 96 )
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hide Recent research papers ( 4 )
Baycin-Hizal et al., 2011, J. Proteome Res. 10(6): 2777--2784
GlycoFly: A Database of Drosophila N-linked Glycoproteins Identified Using SPEG-MS Techniques. [FBrf0213834]
Avet-Rochex et al., 2010, BMC Dev. Biol. 10: 65
An in vivo RNA interference screen identifies gene networks controlling Drosophila melanogaster blood cell homeostasis. [FBrf0211137]
Blanco et al., 2010, BMC Dev. Biol. 10: 94
Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812]
Yan et al., 2010, PLoS ONE 5(8): e12139
A Genome-Wide Gene Function Prediction Resource for Drosophila melanogaster. [FBrf0211503]
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All reviews listed in FlyBase were published before 2010