A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene Dmel\tu(1)Sz

General Information
SymbolDmel\tu(1)SzSpeciesD. melanogaster
Nametumor (1) SzAnnotation symbol
Feature typegeneFlyBase IDFBgn0003875
Gene Model StatusUnannotated Stock availability 1 publicly available
Also Known AsTu-Sz
Genomic Location
Chromosome (arm)Recombination map1-34.3
Cytogenetic map10B1-10B4Sequence location
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Automatically generated summary

See sections below for more information
The gene tumor (1) Sz is referred to in FlyBase by the symbol Dmel\tu(1)Sz (FBgn0003875). It is a gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. One allele is reported. No phenotypic data is available. It has no annotated transcripts. Gene has not been localized to the genome sequence.

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Description
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FB2013_03
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hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
10B1-10B4  
Left limit from complementation mapping against T(1;Y;3)154 (citation unavailable) Right limit from complementation mapping relative to l(1)10Bc (citation unavailable)  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
1-34.3
 
Left of (cM)
Right of (cM)
Notes
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Comments on Gene Model
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Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
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Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
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DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
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Type
Symbol & Location
Additional Notes
References
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Linkouts
Crossreferences
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hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
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Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term
References
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Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
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Linkouts
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Other Phenotypes
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 1 )
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Allele of tu(1)SzClassMutagenStocksKnown lesion
tu(1)Sz11 --
hide Alleles Carried on Transgenic Constructs ( 0 )
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Allele of tu(1)SzClassMutagenStocksKnown lesion
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Disrupted in
Duplicated in
Not disrupted in
Not duplicated in
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Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
hide Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
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Interacts with
Please look at the allele data for full details of the genetic interactions
tu(1)Sz allele
Gene
References
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Linkouts
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hide OrthoDB Orthologs (0) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
Drosophila inclusive ortholog search
No orthologs identified
Dipteran inclusive ortholog search
No orthologs identified
Insect inclusive ortholog search
No orthologs identified
Arthropod inclusive ortholog search
No orthologs identified
Metazoa inclusive ortholog search
No orthologs identified
Orthologs in Drosophila Species (None identified)
No orthologies identified
Orthologs in non-Drosophila Dipterans (None identified)
No non-Drosophilid orthologies identified
Orthologs in non-Dipteran Insects (None identified)
No non-Dipteran orthologies identified
Orthologs in non-Insect Arthropods (None identified)
No non-Insect Arthropod orthologies identified
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
hide Human Orthologs (0)
Gene
OMIM
HGNC
hideAAA Orthologs (0) based on analysis using Dmel annotation version 4.3
No orthologs identified
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hide Stocks Listed in FlyBase ( 1 )
Bloomington
hide Genomic Clones ( 0 )
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cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
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Linkouts
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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Suzuki.
 
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Source for database identity of
Source for database merge of
Additional comments
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One of several loci at which mutations result in melanotic masses (tumors).
 
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Sequence Crossreferences
Other Crossreferences
Linkouts
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
hide Synonyms & Secondary IDs ( 4 )
Reported As
Symbol Synonym
Name Synonym
tumor (1) Sz
 
Secondary FlyBase IDs
hide References ( 14 )
Research paper
Rizki and Rizki, 1991, J. exp. Zool. 257(2): 236--244
Effects of lamellolysin from a parasitoid wasp on Drosophila blood cells in vitro. [FBrf0054540]
Rizki and Rizki, 1990, Experientia 46: 311--315
Microtubule inhibitors block the morphological changes induced in Drosophila blood cells by a parasitoid wasp factor. [FBrf0051745]
Rizki and Rizki, 1990, J. Insect Physiol. 36(7): 523--529
Encapsulation of parasitoid eggs in phenol oxidase-deficient mutants of Drosophila melanogaster. [FBrf0052363]
Zhimulev et al., 1987, Biol. Zentbl. 106(6): 699--720
Fine cytogenetical analysis of the band 10A1-2 and the adjoining regions in the Drosophila melanogaster X-chromosome. [FBrf0045718]
Rizki et al., 1985, Mol. Gen. Genet. 201: 7--13
Genetics of a Drosophila phenoloxidase. [FBrf0043263]
Rizki et al., 1983, Rouxs Arch. Dev. Biol. 192(1): 1--7
Drosophila larval fat body surfaces. Changes in transplant compatibility during development. [FBrf0040169]
Rizki and Rizki, 1980, Rouxs Arch. Dev. Biol. 189(3): 197--206
Developmental analysis of a temperature-sensitive melanotic tumor mutant in Drosophila melanogaster. [FBrf0035577]
Rizki and Rizki, 1959, J. biophys. biochem. Cytol. 5: 235--240, 2 plates
Functional significance of the crystal cells in the larva of Drosophila melanogaster. [FBrf0012723]
Review
Brennan and Anderson, 2004, A. Rev. Immunol. 22: 457--483
Drosophila: the genetics of innate immune recognition and response. [FBrf0174342]
Lavine and Strand, 2002, Insect Biochem. Mol. Biol. 32(10): 1295--1309
Insect hemocytes and their role in immunity. [FBrf0155844]
Dearolf, 1998, Biochim. Biophys. Acta 1377(1): M13--M23
Fruit fly 'leukemia'. [FBrf0102303]
Abstract
Rizki and Rizki, 1979, Genetics 91(4/2): s103--s104
Phenogenetics of Black cells (Bc). [FBrf0033223]
Book
Lindsley and Zimm, 1992, The Genome of Drosophila melanogaster.
The Genome of Drosophila melanogaster. [FBrf0066905]
Teaching note
Perez-Chiesa, 1999, D. I. S. 82: 131--132
Incidence of Drosophila melanogaster flies with melanotic tumors for demonstrating conditionality, penetrance and variable expression. [FBrf0112003]