Gene Dmel\Eig71Ec

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General Information

Symbol

Dmel\Eig71Ec

Species

D. melanogaster

Name

Ecdysone-induced gene 71Ec

Annotation symbol

CG7608

Feature type

protein_coding_gene

FlyBase ID

FBgn0004590

Created / Updated

2003-12-01/2003-12-01

Genomic Location

Chromosome (arm)

Recombination map

Cytogenetic map

71E5-71E5

Sequence location

3L:15,644,572..15,645,351 [-]

Map ( GBrowse )

Summary Information

Automatically generated summary

See sections below for more information

The gene Ecdysone-induced gene 71Ec is referred to in FlyBase by the symbol Eig71Ec (CG7608, FBgn0004590). It has the cytological map location 71E5. Its sequence location is 3L:15644572..15645351. Its molecular function is unknown. The biological processes in which it is involved are not known. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide.

Detailed Mapping Data

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

71E5-71E5

Limits computationally determined from genome sequence between P{EP}Tfb2^EP572 and P{lacW}th^j5C8&P{PZ}Mbs⁰³⁸⁰²

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

71C-71E

(determined by in situ hybridisation)

(Wright et al., 1996)

71E3-71E5

(determined by in situ hybridisation)

(Restifo and Guild, 1986)

Experimentally Determined Recombination Data

Location

Left of (cM)

Right of (cM)

Notes

Molecular Map Data

Gene Order (in direction of increasing cytology)

References

In direction of increasing cytology: Eig71Ea- Eig71Eb+ Eig71Ec- Eig71Ed+ Eig71Ee- Eig71Ef- Eig71Eg+ Eig71Eh- Eig71Ei+ Eig71Ej- Eig71Ek+

(Wright et al., 1996)

Gene Order (overall orientation not stated)

References

Overall orientation not stated: Eig71Ea- Eig71Eb+ Eig71Ec- Eig71Ed+ Eig71Ee- Eig71Ef- Eig71Eg+

(Restifo and Guild, 1986)

Overall orientation not stated: Eig71Ea- Eig71Eb+ Eig71Ec- Eig71Ed+ Eig71Ee- Eig71Ef- Eig71Eg+ Eig71Eh- Eig71Ei+ Eig71Ej- Eig71Ek+

(Crossgrove et al., 1996)

Gene Model & Products

Please see the GBrowse view of Dmel\Eig71Ec for information on other features

Comments on Gene Model

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Associated CDS (aa)

Eig71Ec-RA

FBtr0075586

NM_079366

643

173

Additional Transcript Data & Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kD)

Length (aa)

Theoretical pI

RefSeq ID

GenBank protein

Eig71Ec-PA

FBpp0075339

20.2

173

12.44

NP_524090

AAF49599

Additional Polypeptide Data & Comments

Reported size (kD)

Comments

External Data

Linkouts

PANTHER - Protein classification by function, families, and pathways

•

FBgn0004590

Crossreferences

InterPro domains - A database of protein families, domains, and functional sites

•

Insect protein of unknown function (IPR003475)

Sequences Consistent with the Gene Model

DDBJ /
EMBL /
GenBank

DNA sequence

Protein sequence

Name

Maps to

Does NOT map to

Identified with

LP11175

(BDGP Project Members, 2000-)

Mapped Features & Mutations

Please see GBrowse or insertion reports for information on insertions of transgenic constructs and features not listed here

Type

Symbol & Location

Additional Notes

References

External Data

Linkouts

DEDB - Drosophila exon database: splicing graphs

•

4003

Crossreferences

Expression Data

FlyBase-Curated Data

Transcript and
Protein data

Please see the FlyBase Gene Expression Report for details of gene expression from the literature.

Summary of Transcript Expression

Stage

Tissue/Position

Reference

Marker for

Subcellular Localization

CV Term

Summary of Polypeptide Expression

Stage

Tissue/Position

Reference

Marker for

Subcellular Localization

CV Term

External Data & Images

Linkouts

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

•

FBgn0004590

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

•

FBgn0004590

GEO (NCBI) - Gene expression data: microarray and other high-throughput technologies

•

FBgn0004590

Alleles & Phenotypes

Summary of Allele Phenotypes

Phenotype manifest in

Allele

Classical Alleles ( 0 )

For All Classical Alleles Show

Allele of Eig71Ec	Class	Mutagen	Stocks	Known lesion

Alleles Carried on Transgenic Constructs ( 1 )

For All Alleles Carried on Transgenic Constructs Show

Allele of Eig71Ec	Class	Mutagen	Stocks	Known lesion
Eig71Ec^GD4832		in vitro construct \| RNAi in vitro construct \| regulatory fusion	2	Yes

Aneuploid Aberrations

Useful deficiency

Df(3L)Brd6

Useful duplication

Dp(3;3)M71

Transgenic Constructs & Insertions

Transgenic Constructs

Type of construct

Name

Expression data

UAS construct

P{GD4832}

Insertions

Type of insertions

Name

Expression data

Related Comments

Please look at the allele reports for the complete phenotype data

The RNA transcribed from this gene shows a decrease in length during the period in which it accumulates. This is due to a progressively shorter poly(A) tail.

(Restifo and Guild, 1986)

Eig71Ea, Eig71Eb, Eig71Ec, Eig71Ed, Eig71Ee and Eig71Ef have very reduced levels of transcript accumulation in hemizygous br^rbp-1 larvae and pupae compared to wild type.

(Guay and Guild, 1991)

Ecdysteroid-regulated gene.

(Andres et al., 1993)

71E region contains a cluster of 11 developmentally regulated genes. The transcriptional structure, gene organisation and expression pattern are studied.

(Wright et al., 1996)

The br complex (BR-C) early gene encoded by the Z1 isoform (rbp) directly activates late gene transcription (genes from the 71E salivary glands late puff) by interacting with late gene cis-acting regulatory elements and this interaction is responsible for the temporal linkage of early and late ecdysone-induced gene expression.

(Crossgrove et al., 1996)

Gene Ontology: Function, Process & Cellular Component ( 0 )

Molecular Function

CV term

Evidence

References

Biological Process

CV term

Evidence

References

Cellular Component

CV term