A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\mdy

General Information
SymbolDmel\mdySpeciesD. melanogaster
NamemidwayAnnotation symbolCG31991
Feature typeprotein_coding_geneFlyBase IDFBgn0004797
Gene Model StatusCurrent Stock availability 11 publicly available
Genomic Location
Chromosome (arm)2LRecombination map
Cytogenetic map36B1-36B2Sequence location2L:16,816,665..16,826,991 [+]

Genomic Maps

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modENCODE GBrowse
detailed view
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Automatically generated summary

See sections below for more information
The gene midway is referred to in FlyBase by the symbol Dmel\mdy (CG31991, FBgn0004797). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: diacylglycerol O-acyltransferase activity. There is experimental evidence that it is involved in the biological process: wing disc development; regulation of nurse cell apoptosis; oogenesis; negative regulation of lipid storage. 11 alleles are reported. The phenotypes of these alleles are annotated with: salivary gland; egg chamber. It has 4 annotated transcripts and 4 annotated polypeptides. Protein features are: Membrane bound O-acyl transferase, MBOAT; Sterol O-acyltransferase, ACAT/DAG/ARE types. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 06-18 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult fat body. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult crop, adult hindgut, larval/adult Malpighian tubules, adult heart, larval fat body, larval salivary gland, adult female reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1636579_s_at completely aligns to an exonic region common to each of the 4 FlyBase-annotated transcript isoforms of mdy. Gene sequence location is 2L:16816665..16826991.

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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2011_10
FB2012_01
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
36B1-36B2  
Limits computationally determined from genome sequence between P{lacW}Mhck10423&P{lacW}Cask03902 and P{lacW}Aac11k06710  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
36A10-36A10  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\mdy for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0080914 FBtr0080917 FBtr0080915 FBtr0080916 FBtr0080918 FBtr0080931 FBtr0080930 FBtr0080919 FBpp0080471 FBpp0089387 FBpp0080474 FBpp0080473 FBpp0080472 FBpp0080485 FBpp0080484 FBpp0080475 FBti0072524 FBti0040070 FBti0024984 FBti0124836_1 FBti0124836_2 FBti0114040 FBti0143714 FBti0144074 FBti0056971 FBti0006853_1 FBti0026174 FBti0006853_2 FBti0100830 FBti0072523 FBti0059220 FBti0011264_2 FBti0011264_1 FBti0057733 FBti0042392 FBti0047200
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0080915
  2112
  565
FBtr0080916
  2039
  565
FBtr0080917
  2359
  565
FBtr0080918
  2336
  615
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
mdy-PA  
FBpp0080472  
64.9  
565  
9.66  
mdy-PB  
FBpp0080473  
64.9  
565  
9.66  
mdy-PC  
FBpp0080474  
64.9  
565  
9.66  
mdy-PD  
FBpp0089387  
70.7  
615  
10.06  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view CG13272-RA mdy-RA mdy-RB mdy-RC mdy-RD CG13280-RA Cas-RA CG31739-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0004797


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0004797
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 06-18 hour embryonic stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0004797 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 406
embryo 02-04hr
 
 226
embryo 04-06hr
 
 262
embryo 06-08hr
 
 1060
embryo 08-10hr
 
 1569
embryo 10-12hr
 
 4566
embryo 12-14hr
 
 4477
embryo 14-16hr
 
 988
embryo 16-18hr
 
 1542
embryo 18-20hr
 
 1351
embryo 20-22hr
 
 1195
embryo 22-24hr
 
 2210
larva L1
 
 1053
larva L2
 
 2021
larva L3 12hr old
 
 2276
larva L3 puffstage 1-2
 
 1111
larva L3 puffstage 3-6
 
 712
larva L3 puffstage 7-9
 
 1669
white prepupae new
 
 1217
white prepupae 12hr
 
 1335
white prepupae 24hr
 
 562
pupae 2d postWPP
 
 713
pupae 3d postWPP
 
 335
pupae 4d postWPP
 
 243
adult male 01day
 
 719
adult male 05day
 
 477
adult male 30day
 
 295
adult female 01day
 
 388
adult female 05day
 
 942
adult female 30day
 
 773
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (406)
embryo 02-04hr
 (226)
embryo 04-06hr
 (262)
embryo 06-08hr
 (1060)
embryo 08-10hr
 (1569)
embryo 10-12hr
 (4566)
embryo 12-14hr
 (4477)
embryo 14-16hr
 (988)
embryo 16-18hr
 (1542)
embryo 18-20hr
 (1351)
embryo 20-22hr
 (1195)
embryo 22-24hr
 (2210)
larva L1
 (1053)
larva L2
 (2021)
larva L3 12hr old
 (2276)
larva L3 puffstage 1-2
 (1111)
larva L3 puffstage 3-6
 (712)
larva L3 puffstage 7-9
 (1669)
white prepupae new
 (1217)
white prepupae 12hr
 (1335)
white prepupae 24hr
 (562)
pupae 2d postWPP
 (713)
pupae 3d postWPP
 (335)
pupae 4d postWPP
 (243)
adult male 01day
 (719)
adult male 05day
 (477)
adult male 30day
 (295)
adult female 01day
 (388)
adult female 05day
 (942)
adult female 30day
 (773)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 406
embryo 02-04hr
 
 226
embryo 04-06hr
 
 262
embryo 06-08hr
 
 1060
embryo 08-10hr
 (1569)
embryo 10-12hr
 (4566)
embryo 12-14hr
 (4477)
embryo 14-16hr
 
 988
embryo 16-18hr
 (1542)
embryo 18-20hr
 
 1351
embryo 20-22hr
 
 1195
embryo 22-24hr
 (2210)
larva L1
 
 1053
larva L2
 (2021)
larva L3 12hr old
 (2276)
larva L3 puffstage 1-2
 
 1111
larva L3 puffstage 3-6
 
 712
larva L3 puffstage 7-9
 (1669)
white prepupae new
 
 1217
white prepupae 12hr
 
 1335
white prepupae 24hr
 
 562
pupae 2d postWPP
 
 713
pupae 3d postWPP
 
 335
pupae 4d postWPP
 
 243
adult male 01day
 
 719
adult male 05day
 
 477
adult male 30day
 
 295
adult female 01day
 
 388
adult female 05day
 
 942
adult female 30day
 
 773
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 406
embryo 02-04hr
 
 226
embryo 04-06hr
 
 262
embryo 06-08hr
 
 1060
embryo 08-10hr
 
 1569
embryo 10-12hr
 
 4566
embryo 12-14hr
 
 4477
embryo 14-16hr
 
 988
embryo 16-18hr
 
 1542
embryo 18-20hr
 
 1351
embryo 20-22hr
 
 1195
embryo 22-24hr
 
 2210
larva L1
 
 1053
larva L2
 
 2021
larva L3 12hr old
 
 2276
larva L3 puffstage 1-2
 
 1111
larva L3 puffstage 3-6
 
 712
larva L3 puffstage 7-9
 
 1669
white prepupae new
 
 1217
white prepupae 12hr
 
 1335
white prepupae 24hr
 
 562
pupae 2d postWPP
 
 713
pupae 3d postWPP
 
 335
pupae 4d postWPP
 
 243
adult male 01day
 
 719
adult male 05day
 
 477
adult male 30day
 
 295
adult female 01day
 
 388
adult female 05day
 
 942
adult female 30day
 
 773
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 406
embryo 02-04hr
 
 226
embryo 04-06hr
 
 262
embryo 06-08hr
 
 1060
embryo 08-10hr
 
 1569
embryo 10-12hr
 
 4566
embryo 12-14hr
 
 4477
embryo 14-16hr
 
 988
embryo 16-18hr
 
 1542
embryo 18-20hr
 
 1351
embryo 20-22hr
 
 1195
embryo 22-24hr
 
 2210
larva L1
 
 1053
larva L2
 
 2021
larva L3 12hr old
 
 2276
larva L3 puffstage 1-2
 
 1111
larva L3 puffstage 3-6
 
 712
larva L3 puffstage 7-9
 
 1669
white prepupae new
 
 1217
white prepupae 12hr
 
 1335
white prepupae 24hr
 
 562
pupae 2d postWPP
 
 713
pupae 3d postWPP
 
 335
pupae 4d postWPP
 
 243
adult male 01day
 
 719
adult male 05day
 
 477
adult male 30day
 
 295
adult female 01day
 
 388
adult female 05day
 
 942
adult female 30day
 
 773
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0004797 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 406
embryo 02-04hr
 
 226
embryo 04-06hr
 
 262
embryo 06-08hr
 
 1060
embryo 08-10hr
 
 1569
embryo 10-12hr
 
 4566
embryo 12-14hr
 
 4477
embryo 14-16hr
 
 988
embryo 16-18hr
 
 1542
embryo 18-20hr
 
 1351
embryo 20-22hr
 
 1195
embryo 22-24hr
 
 2210
larva L1
 
 1053
larva L2
 
 2021
larva L3 12hr old
 
 2276
larva L3 puffstage 1-2
 
 1111
larva L3 puffstage 3-6
 
 712
larva L3 puffstage 7-9
 
 1669
white prepupae new
 
 1217
white prepupae 12hr
 
 1335
white prepupae 24hr
 
 562
pupae 2d postWPP
 
 713
pupae 3d postWPP
 
 335
pupae 4d postWPP
 
 243
adult male 01day
 
 719
adult male 05day
 
 477
adult male 30day
 
 295
adult female 01day
 
 388
adult female 05day
 
 942
adult female 30day
 
 773
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (406)
embryo 02-04hr
 (226)
embryo 04-06hr
 (262)
embryo 06-08hr
 (1060)
embryo 08-10hr
 (1569)
embryo 10-12hr
 (4566)
embryo 12-14hr
 (4477)
embryo 14-16hr
 (988)
embryo 16-18hr
 (1542)
embryo 18-20hr
 (1351)
embryo 20-22hr
 (1195)
embryo 22-24hr
 (2210)
larva L1
 (1053)
larva L2
 (2021)
larva L3 12hr old
 (2276)
larva L3 puffstage 1-2
 (1111)
larva L3 puffstage 3-6
 (712)
larva L3 puffstage 7-9
 (1669)
white prepupae new
 (1217)
white prepupae 12hr
 (1335)
white prepupae 24hr
 (562)
pupae 2d postWPP
 (713)
pupae 3d postWPP
 (335)
pupae 4d postWPP
 (243)
adult male 01day
 (719)
adult male 05day
 (477)
adult male 30day
 (295)
adult female 01day
 (388)
adult female 05day
 (942)
adult female 30day
 (773)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 406
embryo 02-04hr
 
 226
embryo 04-06hr
 
 262
embryo 06-08hr
 
 1060
embryo 08-10hr
 1569
embryo 10-12hr
 (4566)
embryo 12-14hr
 (4477)
embryo 14-16hr
 
 988
embryo 16-18hr
 1542
embryo 18-20hr
 
 1351
embryo 20-22hr
 
 1195
embryo 22-24hr
 2210
larva L1
 
 1053
larva L2
 2021
larva L3 12hr old
 2276
larva L3 puffstage 1-2
 
 1111
larva L3 puffstage 3-6
 
 712
larva L3 puffstage 7-9
 1669
white prepupae new
 
 1217
white prepupae 12hr
 
 1335
white prepupae 24hr
 
 562
pupae 2d postWPP
 
 713
pupae 3d postWPP
 
 335
pupae 4d postWPP
 
 243
adult male 01day
 
 719
adult male 05day
 
 477
adult male 30day
 
 295
adult female 01day
 
 388
adult female 05day
 
 942
adult female 30day
 
 773
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 406
embryo 02-04hr
 
 226
embryo 04-06hr
 
 262
embryo 06-08hr
 
 1060
embryo 08-10hr
 
 1569
embryo 10-12hr
 
 4566
embryo 12-14hr
 
 4477
embryo 14-16hr
 
 988
embryo 16-18hr
 
 1542
embryo 18-20hr
 
 1351
embryo 20-22hr
 
 1195
embryo 22-24hr
 
 2210
larva L1
 
 1053
larva L2
 
 2021
larva L3 12hr old
 
 2276
larva L3 puffstage 1-2
 
 1111
larva L3 puffstage 3-6
 
 712
larva L3 puffstage 7-9
 
 1669
white prepupae new
 
 1217
white prepupae 12hr
 
 1335
white prepupae 24hr
 
 562
pupae 2d postWPP
 
 713
pupae 3d postWPP
 
 335
pupae 4d postWPP
 
 243
adult male 01day
 
 719
adult male 05day
 
 477
adult male 30day
 
 295
adult female 01day
 
 388
adult female 05day
 
 942
adult female 30day
 
 773
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 406
embryo 02-04hr
 
 226
embryo 04-06hr
 
 262
embryo 06-08hr
 
 1060
embryo 08-10hr
 
 1569
embryo 10-12hr
 
 4566
embryo 12-14hr
 
 4477
embryo 14-16hr
 
 988
embryo 16-18hr
 
 1542
embryo 18-20hr
 
 1351
embryo 20-22hr
 
 1195
embryo 22-24hr
 
 2210
larva L1
 
 1053
larva L2
 
 2021
larva L3 12hr old
 
 2276
larva L3 puffstage 1-2
 
 1111
larva L3 puffstage 3-6
 
 712
larva L3 puffstage 7-9
 
 1669
white prepupae new
 
 1217
white prepupae 12hr
 
 1335
white prepupae 24hr
 
 562
pupae 2d postWPP
 
 713
pupae 3d postWPP
 
 335
pupae 4d postWPP
 
 243
adult male 01day
 
 719
adult male 05day
 
 477
adult male 30day
 
 295
adult female 01day
 
 388
adult female 05day
 
 942
adult female 30day
 
 773
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0004797


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0004797
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult fat body. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult crop, adult hindgut, larval/adult Malpighian tubules, adult heart, larval fat body, larval salivary gland, adult female reproductive system, larval/adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0004797 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 55.1
Larval Midgut no informative data
Larval Hindgut
 
 94
Larval Malpighian Tubules
 
 126.3
Larval Fat Body
 
 224.5
Larval Salivary Gland
 
 114.9
Larval Trachea
 
 40.675
Larval Carcass
 
 107.7
Adult Head
 
 249.3
Adult Eye
 
 98.85
Adult Brain
 
 41.2
Adult Thoracic-Abdominal Ganglion
 
 41.9
Adult Crop
 
 315.2
Adult Midgut
 
 52.5
Adult Hindgut
 
 164.8
Adult Malpighian Tubules
 
 237.5
Adult Fat Body
 
 543.4
Adult Salivary Gland no informative data
Adult Heart
 
 262.7
Adult VirginFemale Spermatheca
 
 423.9
Adult InseminatedFemale Spermatheca
 
 392.1
Adult Ovary
 
 127.1
Adult Testis no informative data
Adult Male Accessory Gland
 
 2.2
Adult Carcass
 
 285.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 55.1
Larval Midgut no informative data
Larval Hindgut
 
 94
Larval Malpighian Tubules
 
 126.3
Larval Fat Body
 
 224.5
Larval Salivary Gland
 
 114.9
Larval Trachea
 
 40.675
Larval Carcass
 
 107.7
Adult Head
 
 249.3
Adult Eye
 
 98.85
Adult Brain
 
 41.2
Adult Thoracic-Abdominal Ganglion
 
 41.9
Adult Crop
 
 315.2
Adult Midgut
 
 52.5
Adult Hindgut
 
 164.8
Adult Malpighian Tubules
 
 237.5
Adult Fat Body
 (543.4)
Adult Salivary Gland no informative data
Adult Heart
 
 262.7
Adult VirginFemale Spermatheca
 
 423.9
Adult InseminatedFemale Spermatheca
 
 392.1
Adult Ovary
 
 127.1
Adult Testis no informative data
Adult Male Accessory Gland
 
 2.2
Adult Carcass
 
 285.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 55.1
Larval Midgut no informative data
Larval Hindgut
 
 94
Larval Malpighian Tubules
 
 126.3
Larval Fat Body
 
 224.5
Larval Salivary Gland
 
 114.9
Larval Trachea
 
 40.675
Larval Carcass
 
 107.7
Adult Head
 
 249.3
Adult Eye
 
 98.85
Adult Brain
 
 41.2
Adult Thoracic-Abdominal Ganglion
 
 41.9
Adult Crop
 
 315.2
Adult Midgut
 
 52.5
Adult Hindgut
 
 164.8
Adult Malpighian Tubules
 
 237.5
Adult Fat Body
 
 543.4
Adult Salivary Gland no informative data
Adult Heart
 
 262.7
Adult VirginFemale Spermatheca
 
 423.9
Adult InseminatedFemale Spermatheca
 
 392.1
Adult Ovary
 
 127.1
Adult Testis no informative data
Adult Male Accessory Gland
 
 2.2
Adult Carcass
 
 285.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 55.1
Larval Midgut no informative data
Larval Hindgut
 
 94
Larval Malpighian Tubules
 
 126.3
Larval Fat Body
 
 224.5
Larval Salivary Gland
 
 114.9
Larval Trachea
 
 40.675
Larval Carcass
 
 107.7
Adult Head
 
 249.3
Adult Eye
 
 98.85
Adult Brain
 
 41.2
Adult Thoracic-Abdominal Ganglion
 
 41.9
Adult Crop
 
 315.2
Adult Midgut
 
 52.5
Adult Hindgut
 
 164.8
Adult Malpighian Tubules
 
 237.5
Adult Fat Body
 
 543.4
Adult Salivary Gland no informative data
Adult Heart
 
 262.7
Adult VirginFemale Spermatheca
 
 423.9
Adult InseminatedFemale Spermatheca
 
 392.1
Adult Ovary
 
 127.1
Adult Testis no informative data
Adult Male Accessory Gland
 
 2.2
Adult Carcass
 
 285.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0004797 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 55.1
Larval Midgut no informative data
Larval Hindgut
 
 94
Larval Malpighian Tubules
 
 126.3
Larval Fat Body
 
 224.5
Larval Salivary Gland
 
 114.9
Larval Trachea
 
 40.675
Larval Carcass
 
 107.7
Adult Head
 
 249.3
Adult Eye
 
 98.85
Adult Brain
 
 41.2
Adult Thoracic-Abdominal Ganglion
 
 41.9
Adult Crop
 
 315.2
Adult Midgut
 
 52.5
Adult Hindgut
 
 164.8
Adult Malpighian Tubules
 
 237.5
Adult Fat Body
 
 543.4
Adult Salivary Gland no informative data
Adult Heart
 
 262.7
Adult VirginFemale Spermatheca
 
 423.9
Adult InseminatedFemale Spermatheca
 
 392.1
Adult Ovary
 
 127.1
Adult Testis no informative data
Adult Male Accessory Gland
 
 2.2
Adult Carcass
 
 285.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 55.1
Larval Midgut no informative data
Larval Hindgut
 
 94
Larval Malpighian Tubules
 
 126.3
Larval Fat Body
 
 224.5
Larval Salivary Gland
 
 114.9
Larval Trachea
 
 40.675
Larval Carcass
 
 107.7
Adult Head
 
 249.3
Adult Eye
 
 98.85
Adult Brain
 
 41.2
Adult Thoracic-Abdominal Ganglion
 
 41.9
Adult Crop
 
 315.2
Adult Midgut
 
 52.5
Adult Hindgut
 
 164.8
Adult Malpighian Tubules
 
 237.5
Adult Fat Body
 543.4
Adult Salivary Gland no informative data
Adult Heart
 
 262.7
Adult VirginFemale Spermatheca
 
 423.9
Adult InseminatedFemale Spermatheca
 
 392.1
Adult Ovary
 
 127.1
Adult Testis no informative data
Adult Male Accessory Gland
 
 2.2
Adult Carcass
 
 285.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 55.1
Larval Midgut no informative data
Larval Hindgut
 
 94
Larval Malpighian Tubules
 
 126.3
Larval Fat Body
 
 224.5
Larval Salivary Gland
 
 114.9
Larval Trachea
 
 40.675
Larval Carcass
 
 107.7
Adult Head
 
 249.3
Adult Eye
 
 98.85
Adult Brain
 
 41.2
Adult Thoracic-Abdominal Ganglion
 
 41.9
Adult Crop
 
 315.2
Adult Midgut
 
 52.5
Adult Hindgut
 
 164.8
Adult Malpighian Tubules
 
 237.5
Adult Fat Body
 
 543.4
Adult Salivary Gland no informative data
Adult Heart
 
 262.7
Adult VirginFemale Spermatheca
 
 423.9
Adult InseminatedFemale Spermatheca
 
 392.1
Adult Ovary
 
 127.1
Adult Testis no informative data
Adult Male Accessory Gland
 
 2.2
Adult Carcass
 
 285.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 55.1
Larval Midgut no informative data
Larval Hindgut
 
 94
Larval Malpighian Tubules
 
 126.3
Larval Fat Body
 
 224.5
Larval Salivary Gland
 
 114.9
Larval Trachea
 
 40.675
Larval Carcass
 
 107.7
Adult Head
 
 249.3
Adult Eye
 
 98.85
Adult Brain
 
 41.2
Adult Thoracic-Abdominal Ganglion
 
 41.9
Adult Crop
 
 315.2
Adult Midgut
 
 52.5
Adult Hindgut
 
 164.8
Adult Malpighian Tubules
 
 237.5
Adult Fat Body
 
 543.4
Adult Salivary Gland no informative data
Adult Heart
 
 262.7
Adult VirginFemale Spermatheca
 
 423.9
Adult InseminatedFemale Spermatheca
 
 392.1
Adult Ovary
 
 127.1
Adult Testis no informative data
Adult Male Accessory Gland
 
 2.2
Adult Carcass
 
 285.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut no informative data
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland no informative data
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis no informative data
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 249.3
 
NA 
Eye
 
 98.85
 
NA 
Brain
 
 41.2
 
55.1 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 41.9
 
NA 
Crop
 
 315.2
 
no informative data 
Midgut
 
 52.5
 
94 
Hindgut
 
 164.8
 
126.3 
Malpighian Tubules
 
 237.5
 
224.5 
Fat Body
 
 543.4
 
114.9 
Salivary Gland
 
 no informative data
 
NA 
Heart
 
 262.7
 
40.675 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 423.9
 
NA 
InseminatedFemale Spermatheca
 
 392.1
 
NA 
Ovary
 
 127.1
 
NA 
Testis
 
 no informative data
 
NA 
Male Accessory Gland
 
 2.2
 
107.7 
Carcass
 
 285.2

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Phenotype manifest in
Allele
nurse cell & nuclear membrane
nurse cell & nucleus
hide Classical Alleles ( 9 )
For All Classical Alleles Show

Allele of mdyClassMutagenStocksKnown lesion
mdyQX252 Yes
mdy01
1 Yes
mdyDG10212
1 --
mdyEY07280
1 Yes
mdyk039021 Yes
mdyKG089051 --
mdyMB08748
1 --
mdyEP25920 Yes
mdyRF480 Yes
hide Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show

Allele of mdyClassMutagenStocksKnown lesion
mdyGD17492 Yes
mdyKK1028991 Yes
hide Aneuploid Aberrations
Disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
UAS construct
Insertions
Type of insertions
Name
Expression data
insertion of mobile activating element
insertion of enhancer trap
insertion of enhancer trap binary system
hide Gene Ontology: Function, Process & Cellular Component ( 7 unique terms )
hide Terms Based on Experimental Evidence ( 5 terms )
Molecular Function
CV term
References
Biological Process
CV term
References
inferred from mutant phenotype
inferred from genetic interaction with Bx
Cellular Component ( 0 terms)
hide Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term
References
inferred from sequence or structural similarity with EMBL:AY065621
non-traceable author statement
inferred from sequence or structural similarity
Biological Process
CV term
References
inferred from sequence or structural similarity with EMBL:AY065621
Cellular Component ( 0 terms)
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
mdy allele
Gene
References
hide External Data
Linkouts
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 11 )
Bloomington
Kyoto
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 30 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Source for merge of: CG17938 CG13273
Source for merge of: CG17938 CG17937
Additional comments
Source for merge of CG17938 CG13273 was a shared cDNA (date:010720).
hide Other Comments
Mutant egg chambers contain severely reduced levels of neutral lipids in the germline. In direction of increasing cytology: mdy+ Cas- mdy+
Egg chambers undergo premature nurse cell actin bundling, nuclear membrane permeabilization, cell death and degeneration in mdy mutant females.
Mutations at the mdy locus cause defects in midoogenesis.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 10 )
Reported As
Symbol Synonym
CG13273
 
CG17937
 
Name Synonym
Secondary FlyBase IDs
  • FBgn0032608
  • FBgn0032610
  • FBgn0032611
  • FBgn0051991
hide References ( 39 )
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hide Recent research papers ( 4 )
Tian et al., 2011, PLoS Genet. 7(4): e1001364
Tissue-autonomous function of Drosophila seipin in preventing ectopic lipid droplet formation. [FBrf0213596]
Beller et al., 2010, Cell Metab. 12(5): 521--532
PERILIPIN-dependent control of lipid droplet structure and fat storage in Drosophila. [FBrf0212228]
Blanco et al., 2010, BMC Dev. Biol. 10: 94
Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812]
Bronstein et al., 2010, PLoS Genet. 6(8): e1001063
Transcriptional regulation by CHIP/LDB complexes. [FBrf0211594]
hide Recent reviews (0)
All reviews listed in FlyBase were published before 2010