A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\Lac

General Information
SymbolDmel\LacSpeciesD. melanogaster
NameLachesinAnnotation symbolCG12369
Feature typeprotein_coding_geneFlyBase IDFBgn0010238
Gene Model StatusCurrent Stock availability 11 publicly available
Also Known Asbulb, l(2)k11012
Genomic Location
Chromosome (arm)2RRecombination map
Cytogenetic map49A6-49A7Sequence location2R:8,340,696..8,353,154 [+]

Genomic Maps

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Automatically generated summary

See sections below for more information
The gene Lachesin is referred to in FlyBase by the symbol Dmel\Lac (CG12369, FBgn0010238). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process: morphogenesis of embryonic epithelium; homophilic cell adhesion; regulation of tube size, open tracheal system; maintenance of epithelial integrity, open tracheal system; open tracheal system development. 14 alleles are reported. The phenotypes of these alleles are annotated with: presumptive embryonic salivary gland; dorsal group branch precursor; embryonic/larval dorsal trunk; presumptive embryonic/larval tracheal system; embryonic/larval tracheal system; lateral group branch precursor; dorsal trunk primordium; embryonic/larval transverse connective. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Immunoglobulin I-set; Immunoglobulin subtype; Immunoglobulin subtype 2; Immunoglobulin-like; Immunoglobulin-like fold. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed within 00-18 hour embryonic stages, during early pupal stages. Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate or high levels. Expression at high levels in the following post-embryonic organs or tissues: adult head, larval central nervous system, adult crop, larval/adult hindgut, larval/adult salivary gland, larval trachea, adult ovary, adult male accessory gland, larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, adult central nervous system, larval fat body, adult spermathecae, adult testis, adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1628336_a_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of Lac. Gene sequence location is 2R:8340696..8353154.

External Summaries
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Description
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FB2012_01
Sequence features
FB2011_10
References
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
49A6-49A7  
Limits computationally determined from genome sequence between P{lacW}l(2)k11404k11404 and P{lacW}fdlk17040  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\Lac for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0113074 FBtr0087929 FBtr0308613 FBtr0305076 FBtr0100298 FBtr0305077 FBtr0087930 FBtr0087932 FBtr0087933 FBtr0087948 FBpp0293614 FBpp0087041 FBpp0293613 FBpp0087040 FBpp0300837 FBpp0099693 FBpp0111987 FBpp0087043 FBpp0087044 FBpp0087059 FBti0024426 FBti0054065 FBti0047791 FBti0143777 FBti0045770 FBti0045771 FBti0125135 FBti0143795
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0087933
  2174
  359
FBtr0087932
  1853
  252
Additional Transcript Data & Comments
Reported size (kB)
2.1 (longest cDNA)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
Lac-PA  
FBpp0087044  
39.9  
359  
5.09  
Lac-PB  
FBpp0087043  
28.2  
252  
4.58  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view Dyb-RA Dyb-RI Dyb-RD Dyb-RH Dyb-RC Lac-RB Lac-RA dgt5-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0010238


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0010238
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed within 00-18 hour embryonic stages, during early pupal stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0010238 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 5052
embryo 02-04hr
 
 29405
embryo 04-06hr
 
 29708
embryo 06-08hr
 
 28941
embryo 08-10hr
 
 22229
embryo 10-12hr
 
 23006
embryo 12-14hr
 
 16808
embryo 14-16hr
 
 14602
embryo 16-18hr
 
 10543
embryo 18-20hr
 
 7614
embryo 20-22hr
 
 4037
embryo 22-24hr
 
 3956
larva L1
 
 3589
larva L2
 
 2622
larva L3 12hr old
 
 1868
larva L3 puffstage 1-2
 
 2305
larva L3 puffstage 3-6
 
 4401
larva L3 puffstage 7-9
 
 5666
white prepupae new
 
 8222
white prepupae 12hr
 
 11283
white prepupae 24hr
 
 19577
pupae 2d postWPP
 
 8018
pupae 3d postWPP
 
 5619
pupae 4d postWPP
 
 2405
adult male 01day
 
 2318
adult male 05day
 
 2526
adult male 30day
 
 2879
adult female 01day
 
 2981
adult female 05day
 
 2596
adult female 30day
 
 2310
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (5052)
embryo 02-04hr
 (29405)
embryo 04-06hr
 (29708)
embryo 06-08hr
 (28941)
embryo 08-10hr
 (22229)
embryo 10-12hr
 (23006)
embryo 12-14hr
 (16808)
embryo 14-16hr
 (14602)
embryo 16-18hr
 (10543)
embryo 18-20hr
 (7614)
embryo 20-22hr
 (4037)
embryo 22-24hr
 (3956)
larva L1
 (3589)
larva L2
 (2622)
larva L3 12hr old
 (1868)
larva L3 puffstage 1-2
 (2305)
larva L3 puffstage 3-6
 (4401)
larva L3 puffstage 7-9
 (5666)
white prepupae new
 (8222)
white prepupae 12hr
 (11283)
white prepupae 24hr
 (19577)
pupae 2d postWPP
 (8018)
pupae 3d postWPP
 (5619)
pupae 4d postWPP
 (2405)
adult male 01day
 (2318)
adult male 05day
 (2526)
adult male 30day
 (2879)
adult female 01day
 (2981)
adult female 05day
 (2596)
adult female 30day
 (2310)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (5052)
embryo 02-04hr
 (29405)
embryo 04-06hr
 (29708)
embryo 06-08hr
 (28941)
embryo 08-10hr
 (22229)
embryo 10-12hr
 (23006)
embryo 12-14hr
 (16808)
embryo 14-16hr
 (14602)
embryo 16-18hr
 (10543)
embryo 18-20hr
 (7614)
embryo 20-22hr
 (4037)
embryo 22-24hr
 (3956)
larva L1
 (3589)
larva L2
 (2622)
larva L3 12hr old
 (1868)
larva L3 puffstage 1-2
 (2305)
larva L3 puffstage 3-6
 (4401)
larva L3 puffstage 7-9
 (5666)
white prepupae new
 (8222)
white prepupae 12hr
 (11283)
white prepupae 24hr
 (19577)
pupae 2d postWPP
 (8018)
pupae 3d postWPP
 (5619)
pupae 4d postWPP
 (2405)
adult male 01day
 (2318)
adult male 05day
 (2526)
adult male 30day
 (2879)
adult female 01day
 (2981)
adult female 05day
 (2596)
adult female 30day
 (2310)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 5052
embryo 02-04hr
 (29405)
embryo 04-06hr
 (29708)
embryo 06-08hr
 (28941)
embryo 08-10hr
 (22229)
embryo 10-12hr
 (23006)
embryo 12-14hr
 (16808)
embryo 14-16hr
 (14602)
embryo 16-18hr
 10543
embryo 18-20hr
 
 7614
embryo 20-22hr
 
 4037
embryo 22-24hr
 
 3956
larva L1
 
 3589
larva L2
 
 2622
larva L3 12hr old
 
 1868
larva L3 puffstage 1-2
 
 2305
larva L3 puffstage 3-6
 
 4401
larva L3 puffstage 7-9
 
 5666
white prepupae new
 
 8222
white prepupae 12hr
 (11283)
white prepupae 24hr
 (19577)
pupae 2d postWPP
 
 8018
pupae 3d postWPP
 
 5619
pupae 4d postWPP
 
 2405
adult male 01day
 
 2318
adult male 05day
 
 2526
adult male 30day
 
 2879
adult female 01day
 
 2981
adult female 05day
 
 2596
adult female 30day
 
 2310
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 5052
embryo 02-04hr
 
 29405
embryo 04-06hr
 
 29708
embryo 06-08hr
 
 28941
embryo 08-10hr
 
 22229
embryo 10-12hr
 
 23006
embryo 12-14hr
 
 16808
embryo 14-16hr
 
 14602
embryo 16-18hr
 
 10543
embryo 18-20hr
 
 7614
embryo 20-22hr
 
 4037
embryo 22-24hr
 
 3956
larva L1
 
 3589
larva L2
 
 2622
larva L3 12hr old
 
 1868
larva L3 puffstage 1-2
 
 2305
larva L3 puffstage 3-6
 
 4401
larva L3 puffstage 7-9
 
 5666
white prepupae new
 
 8222
white prepupae 12hr
 
 11283
white prepupae 24hr
 
 19577
pupae 2d postWPP
 
 8018
pupae 3d postWPP
 
 5619
pupae 4d postWPP
 
 2405
adult male 01day
 
 2318
adult male 05day
 
 2526
adult male 30day
 
 2879
adult female 01day
 
 2981
adult female 05day
 
 2596
adult female 30day
 
 2310
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0010238 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 5052
embryo 02-04hr
 
 29405
embryo 04-06hr
 
 29708
embryo 06-08hr
 
 28941
embryo 08-10hr
 
 22229
embryo 10-12hr
 
 23006
embryo 12-14hr
 
 16808
embryo 14-16hr
 
 14602
embryo 16-18hr
 
 10543
embryo 18-20hr
 
 7614
embryo 20-22hr
 
 4037
embryo 22-24hr
 
 3956
larva L1
 
 3589
larva L2
 
 2622
larva L3 12hr old
 
 1868
larva L3 puffstage 1-2
 
 2305
larva L3 puffstage 3-6
 
 4401
larva L3 puffstage 7-9
 
 5666
white prepupae new
 
 8222
white prepupae 12hr
 
 11283
white prepupae 24hr
 
 19577
pupae 2d postWPP
 
 8018
pupae 3d postWPP
 
 5619
pupae 4d postWPP
 
 2405
adult male 01day
 
 2318
adult male 05day
 
 2526
adult male 30day
 
 2879
adult female 01day
 
 2981
adult female 05day
 
 2596
adult female 30day
 
 2310
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (5052)
embryo 02-04hr
 (29405)
embryo 04-06hr
 (29708)
embryo 06-08hr
 (28941)
embryo 08-10hr
 (22229)
embryo 10-12hr
 (23006)
embryo 12-14hr
 (16808)
embryo 14-16hr
 (14602)
embryo 16-18hr
 (10543)
embryo 18-20hr
 (7614)
embryo 20-22hr
 (4037)
embryo 22-24hr
 (3956)
larva L1
 (3589)
larva L2
 (2622)
larva L3 12hr old
 (1868)
larva L3 puffstage 1-2
 (2305)
larva L3 puffstage 3-6
 (4401)
larva L3 puffstage 7-9
 (5666)
white prepupae new
 (8222)
white prepupae 12hr
 (11283)
white prepupae 24hr
 (19577)
pupae 2d postWPP
 (8018)
pupae 3d postWPP
 (5619)
pupae 4d postWPP
 (2405)
adult male 01day
 (2318)
adult male 05day
 (2526)
adult male 30day
 (2879)
adult female 01day
 (2981)
adult female 05day
 (2596)
adult female 30day
 (2310)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (5052)
embryo 02-04hr
 (29405)
embryo 04-06hr
 (29708)
embryo 06-08hr
 (28941)
embryo 08-10hr
 (22229)
embryo 10-12hr
 (23006)
embryo 12-14hr
 (16808)
embryo 14-16hr
 (14602)
embryo 16-18hr
 (10543)
embryo 18-20hr
 (7614)
embryo 20-22hr
 (4037)
embryo 22-24hr
 (3956)
larva L1
 (3589)
larva L2
 (2622)
larva L3 12hr old
 1868
larva L3 puffstage 1-2
 2305
larva L3 puffstage 3-6
 (4401)
larva L3 puffstage 7-9
 (5666)
white prepupae new
 (8222)
white prepupae 12hr
 (11283)
white prepupae 24hr
 (19577)
pupae 2d postWPP
 (8018)
pupae 3d postWPP
 (5619)
pupae 4d postWPP
 2405
adult male 01day
 2318
adult male 05day
 (2526)
adult male 30day
 (2879)
adult female 01day
 (2981)
adult female 05day
 (2596)
adult female 30day
 2310
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 5052
embryo 02-04hr
 (29405)
embryo 04-06hr
 (29708)
embryo 06-08hr
 (28941)
embryo 08-10hr
 (22229)
embryo 10-12hr
 (23006)
embryo 12-14hr
 16808
embryo 14-16hr
 14602
embryo 16-18hr
 10543
embryo 18-20hr
 
 7614
embryo 20-22hr
 
 4037
embryo 22-24hr
 
 3956
larva L1
 
 3589
larva L2
 
 2622
larva L3 12hr old
 
 1868
larva L3 puffstage 1-2
 
 2305
larva L3 puffstage 3-6
 
 4401
larva L3 puffstage 7-9
 
 5666
white prepupae new
 
 8222
white prepupae 12hr
 11283
white prepupae 24hr
 19577
pupae 2d postWPP
 
 8018
pupae 3d postWPP
 
 5619
pupae 4d postWPP
 
 2405
adult male 01day
 
 2318
adult male 05day
 
 2526
adult male 30day
 
 2879
adult female 01day
 
 2981
adult female 05day
 
 2596
adult female 30day
 
 2310
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 5052
embryo 02-04hr
 
 29405
embryo 04-06hr
 
 29708
embryo 06-08hr
 
 28941
embryo 08-10hr
 
 22229
embryo 10-12hr
 
 23006
embryo 12-14hr
 
 16808
embryo 14-16hr
 
 14602
embryo 16-18hr
 
 10543
embryo 18-20hr
 
 7614
embryo 20-22hr
 
 4037
embryo 22-24hr
 
 3956
larva L1
 
 3589
larva L2
 
 2622
larva L3 12hr old
 
 1868
larva L3 puffstage 1-2
 
 2305
larva L3 puffstage 3-6
 
 4401
larva L3 puffstage 7-9
 
 5666
white prepupae new
 
 8222
white prepupae 12hr
 
 11283
white prepupae 24hr
 
 19577
pupae 2d postWPP
 
 8018
pupae 3d postWPP
 
 5619
pupae 4d postWPP
 
 2405
adult male 01day
 
 2318
adult male 05day
 
 2526
adult male 30day
 
 2879
adult female 01day
 
 2981
adult female 05day
 
 2596
adult female 30day
 
 2310
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0010238


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0010238
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate or high levels. Expression at high levels in the following post-embryonic organs or tissues: adult head, larval central nervous system, adult crop, larval/adult hindgut, larval/adult salivary gland, larval trachea, adult ovary, adult male accessory gland, larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, adult central nervous system, larval fat body, adult spermathecae, adult testis, adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0010238 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 874.35
Larval Midgut
 
 71.6
Larval Hindgut
 
 902.7
Larval Malpighian Tubules
 
 16.4
Larval Fat Body
 
 172.7
Larval Salivary Gland
 
 896
Larval Trachea
 
 1569.625
Larval Carcass
 
 605.325
Adult Head
 
 518.9
Adult Eye
 
 467.8
Adult Brain
 
 248.7
Adult Thoracic-Abdominal Ganglion
 
 144.8
Adult Crop
 
 1195.3
Adult Midgut
 
 48
Adult Hindgut
 
 736.7
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 64.3
Adult Salivary Gland
 
 969.9
Adult Heart
 
 67.25
Adult VirginFemale Spermatheca
 
 183.1
Adult InseminatedFemale Spermatheca
 
 261
Adult Ovary
 
 501.4
Adult Testis
 
 245
Adult Male Accessory Gland
 
 622.3
Adult Carcass
 
 404.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (874.35)
Larval Midgut
 
 71.6
Larval Hindgut
 (902.7)
Larval Malpighian Tubules
 
 16.4
Larval Fat Body
 
 172.7
Larval Salivary Gland
 (896)
Larval Trachea
 (1569.625)
Larval Carcass
 (605.325)
Adult Head
 518.9
Adult Eye
 
 467.8
Adult Brain
 
 248.7
Adult Thoracic-Abdominal Ganglion
 
 144.8
Adult Crop
 (1195.3)
Adult Midgut
 
 48
Adult Hindgut
 (736.7)
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 64.3
Adult Salivary Gland
 (969.9)
Adult Heart
 
 67.25
Adult VirginFemale Spermatheca
 
 183.1
Adult InseminatedFemale Spermatheca
 
 261
Adult Ovary
 501.4
Adult Testis
 
 245
Adult Male Accessory Gland
 (622.3)
Adult Carcass
 
 404.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 874.35
Larval Midgut
 
 71.6
Larval Hindgut
 
 902.7
Larval Malpighian Tubules
 
 16.4
Larval Fat Body
 
 172.7
Larval Salivary Gland
 
 896
Larval Trachea
 (1569.625)
Larval Carcass
 
 605.325
Adult Head
 
 518.9
Adult Eye
 
 467.8
Adult Brain
 
 248.7
Adult Thoracic-Abdominal Ganglion
 
 144.8
Adult Crop
 (1195.3)
Adult Midgut
 
 48
Adult Hindgut
 
 736.7
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 64.3
Adult Salivary Gland
 
 969.9
Adult Heart
 
 67.25
Adult VirginFemale Spermatheca
 
 183.1
Adult InseminatedFemale Spermatheca
 
 261
Adult Ovary
 
 501.4
Adult Testis
 
 245
Adult Male Accessory Gland
 
 622.3
Adult Carcass
 
 404.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 874.35
Larval Midgut
 
 71.6
Larval Hindgut
 
 902.7
Larval Malpighian Tubules
 
 16.4
Larval Fat Body
 
 172.7
Larval Salivary Gland
 
 896
Larval Trachea
 
 1569.625
Larval Carcass
 
 605.325
Adult Head
 
 518.9
Adult Eye
 
 467.8
Adult Brain
 
 248.7
Adult Thoracic-Abdominal Ganglion
 
 144.8
Adult Crop
 
 1195.3
Adult Midgut
 
 48
Adult Hindgut
 
 736.7
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 64.3
Adult Salivary Gland
 
 969.9
Adult Heart
 
 67.25
Adult VirginFemale Spermatheca
 
 183.1
Adult InseminatedFemale Spermatheca
 
 261
Adult Ovary
 
 501.4
Adult Testis
 
 245
Adult Male Accessory Gland
 
 622.3
Adult Carcass
 
 404.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0010238 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 874.35
Larval Midgut
 
 71.6
Larval Hindgut
 
 902.7
Larval Malpighian Tubules
 
 16.4
Larval Fat Body
 
 172.7
Larval Salivary Gland
 
 896
Larval Trachea
 
 1569.625
Larval Carcass
 
 605.325
Adult Head
 
 518.9
Adult Eye
 
 467.8
Adult Brain
 
 248.7
Adult Thoracic-Abdominal Ganglion
 
 144.8
Adult Crop
 
 1195.3
Adult Midgut
 
 48
Adult Hindgut
 
 736.7
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 64.3
Adult Salivary Gland
 
 969.9
Adult Heart
 
 67.25
Adult VirginFemale Spermatheca
 
 183.1
Adult InseminatedFemale Spermatheca
 
 261
Adult Ovary
 
 501.4
Adult Testis
 
 245
Adult Male Accessory Gland
 
 622.3
Adult Carcass
 
 404.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (874.35)
Larval Midgut
 
 71.6
Larval Hindgut
 (902.7)
Larval Malpighian Tubules
 
 16.4
Larval Fat Body
 
 172.7
Larval Salivary Gland
 (896)
Larval Trachea
 (1569.625)
Larval Carcass
 605.325
Adult Head
 518.9
Adult Eye
 
 467.8
Adult Brain
 
 248.7
Adult Thoracic-Abdominal Ganglion
 
 144.8
Adult Crop
 (1195.3)
Adult Midgut
 
 48
Adult Hindgut
 736.7
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 64.3
Adult Salivary Gland
 (969.9)
Adult Heart
 
 67.25
Adult VirginFemale Spermatheca
 
 183.1
Adult InseminatedFemale Spermatheca
 
 261
Adult Ovary
 501.4
Adult Testis
 
 245
Adult Male Accessory Gland
 622.3
Adult Carcass
 
 404.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 874.35
Larval Midgut
 
 71.6
Larval Hindgut
 
 902.7
Larval Malpighian Tubules
 
 16.4
Larval Fat Body
 
 172.7
Larval Salivary Gland
 
 896
Larval Trachea
 1569.625
Larval Carcass
 
 605.325
Adult Head
 
 518.9
Adult Eye
 
 467.8
Adult Brain
 
 248.7
Adult Thoracic-Abdominal Ganglion
 
 144.8
Adult Crop
 1195.3
Adult Midgut
 
 48
Adult Hindgut
 
 736.7
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 64.3
Adult Salivary Gland
 
 969.9
Adult Heart
 
 67.25
Adult VirginFemale Spermatheca
 
 183.1
Adult InseminatedFemale Spermatheca
 
 261
Adult Ovary
 
 501.4
Adult Testis
 
 245
Adult Male Accessory Gland
 
 622.3
Adult Carcass
 
 404.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 874.35
Larval Midgut
 
 71.6
Larval Hindgut
 
 902.7
Larval Malpighian Tubules
 
 16.4
Larval Fat Body
 
 172.7
Larval Salivary Gland
 
 896
Larval Trachea
 
 1569.625
Larval Carcass
 
 605.325
Adult Head
 
 518.9
Adult Eye
 
 467.8
Adult Brain
 
 248.7
Adult Thoracic-Abdominal Ganglion
 
 144.8
Adult Crop
 
 1195.3
Adult Midgut
 
 48
Adult Hindgut
 
 736.7
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 64.3
Adult Salivary Gland
 
 969.9
Adult Heart
 
 67.25
Adult VirginFemale Spermatheca
 
 183.1
Adult InseminatedFemale Spermatheca
 
 261
Adult Ovary
 
 501.4
Adult Testis
 
 245
Adult Male Accessory Gland
 
 622.3
Adult Carcass
 
 404.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 518.9
 
NA 
Eye
 
 467.8
 
NA 
Brain
 
 248.7
 
874.35 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 144.8
 
NA 
Crop
 
 1195.3
 
71.6 
Midgut
 
 48
 
902.7 
Hindgut
 
 736.7
 
16.4 
Malpighian Tubules
 
 no informative data
 
172.7 
Fat Body
 
 64.3
 
896 
Salivary Gland
 
 969.9
 
NA 
Heart
 
 67.25
 
1569.625 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 183.1
 
NA 
InseminatedFemale Spermatheca
 
 261
 
NA 
Ovary
 
 501.4
 
NA 
Testis
 
 245
 
NA 
Male Accessory Gland
 
 622.3
 
605.325 
Carcass
 
 404.4

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 10 )
For All Classical Alleles Show

Allele of LacClassMutagenStocksKnown lesion
LacBG014622 --
Lacc063541 --
Lacc063551 --
Lacd004611 --
Lace026161 --
LacG000441 Yes
Lack11012bloss of function allele1 --
Lac20 Yes
LacCPTI0024080 Yes
LacCPTI0026010 Yes
hide Alleles Carried on Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show

Allele of LacClassMutagenStocksKnown lesion
LacGD126491 Yes
LacHM051511 Yes
LacKK1074691 Yes
LacScer\UAS.cLa0 Yes
hide Aneuploid Aberrations
Disrupted in
Not disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
insertion of mobile activating element
hide Gene Ontology: Function, Process & Cellular Component ( 9 unique terms )
hide Terms Based on Experimental Evidence ( 7 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
inferred from expression pattern AND inferred from mutant phenotype
inferred from mutant phenotype
Cellular Component
CV term
References
inferred from direct assay
inferred from direct assay
hide Terms Based on Predictions or Assertions ( 2 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
inferred from sequence or structural similarity with UniProtKB:Q26474
Cellular Component
CV term
References
hide Sequence Ontology: Class of Gene
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hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
Lac allele
Gene
References
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Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 11 )
Bloomington
Harvard
Kyoto
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 199 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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Source for database identity of
Source for identity of: bulb l(2)k11012
Source for database merge of
Source for merge of: Lac bulb
Additional comments
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Embryos injected with dsRNA made from templates generated with primers directed against this gene show late epithelial embryonic defect - these embryos die following profound defects in the development of the tracheal epithelial tubes.
Lac behaves as a homophilic cell adhesion molecule required to provide epithelial integrity to the tracheal tubes and to control tubular epithelium length.
Area matching Drosophila Lachesin gene, Acc. No. L13255.
Mutation in Lac alters tracheal tube size in embryos without affecting other aspects of tracheal development including primary branch budding and outgrowth or branch fusion.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 11 )
Reported As
Symbol Synonym
Name Synonym
bulbous
 
lachesin bulbous
Secondary FlyBase IDs
  • FBgn0021933
hide References ( 58 )
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hide Recent research papers ( 2 )
Cherbas et al., 2011, Genome Res. 21(2): 301--314
The transcriptional diversity of 25 Drosophila cell lines. [FBrf0213077]
Laprise et al., 2010, Curr. Biol. 20(1): 55--61
Epithelial Polarity Proteins Regulate Drosophila Tracheal Tube Size in Parallel to the Luminal Matrix Pathway. [FBrf0209969]
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All reviews listed in FlyBase were published before 2010