General Information Symbol Dmel\ bysSpecies D. melanogaster Name by S6 Annotation symbol CG1430 Feature type protein_coding_gene FlyBase ID FBgn0010292 Gene Model Status Current Stock availability 2 publicly
available Genomic Location Chromosome (arm) X Recombination map 1-20.45 Cytogenetic map 7C2-7C2 Sequence location X:7,795,913..7,797,676 [+]
Genomic Maps
Summary Information Automatically generated summary
See sections below for more information The gene
by S6 is referred to in FlyBase by the symbol
Dmel\bys (CG1430, FBgn0010292). It is a protein_coding_gene from
Drosophila melanogaster . Its
molecular function is unknown. There is experimental evidence that it is involved in the
biological process : neurogenesis.
3 alleles are reported . The
phenotypes of these alleles are annotated with: trichogen cell; mesothoracic tergum. It has
one annotated transcript and
one annotated polypeptide .
Protein features are: Bystin. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages, during early larval stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval carcass. Comments on Affy2 ProbeSet: ProbeSet 1640145_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of bys. Gene sequence location is
X:7795913..7797676 .
User Contributed Data
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FB2013_03
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Detailed Mapping Data
FlyBase Computed Cytological Location
Experimentally Determined Cytological Location
Experimentally Determined Recombination Data
Location Left of (cM) Right of (cM) Notes Gene Model & Products Comments on Gene
Model Gene model reviewed during 5.50
Transcript Data Annotated Transcripts Additional Transcript Data
& Comments Reported size (kB) Comments External Data Crossreferences
Polypeptide Data Annotated
Polypeptides Additional Polypeptide
Data & Comments Reported size (kDa) Comments External Data Linkouts Crossreferences
domains - A database of protein families, domains, and functional sites
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank UniProtKB/Swiss-Prot UniProtKB/TrEMBL Mapped Features Mapped Features have been reorganized, please
see this article for details. Additional mapped features and mutations can
be found on GBrowse or related reports. External Data Linkouts Crossreferences Expression Data Transcript ExpressionComment: maternally deposited
Comment: reported as salivary gland primordium
Comment: reported as muscle system primordium
Comment: reported as muscle system primordium
Additional Descriptive Data
Marker for Subcellular Localization CV Term Polypeptide Expression
Additional Descriptive Data
Marker for Subcellular Localization (GO Cellular Component) inferred from direct assay
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference
FlyAtlas Anatomy Microarray
Linear, scaled to maximum expression level
Tissue
Expression Level
Larval Central Nervous System
156.625
Larval Midgut
67.3
Larval Hindgut
98.6
Larval Malpighian Tubules
58.4
Larval Fat Body
58.4
Larval Salivary Gland
143.6
Larval Trachea
189.375
Larval Carcass
100.525
Adult Head
86.6
Adult Eye
62.15
Adult Brain
93.7
Adult Thoracic-Abdominal Ganglion
101.1
Adult Crop
87.7
Adult Midgut
94.8
Adult Hindgut
79.6
Adult Malpighian Tubules
82.7
Adult Fat Body
118.4
Adult Salivary Gland
138.2
Adult Heart
88.275
Adult VirginFemale Spermatheca
126.7
Adult InseminatedFemale Spermatheca
178.2
Adult Ovary
368
Adult Testis
34.6
Adult Male Accessory Gland
185.4
Adult Carcass
97.4
Expression Level Scale
None
Low
Moderate
Linear, scaled to Moderate expression
Tissue
Expression Level
Larval Central Nervous System
156.625
Larval Midgut
67.3
Larval Hindgut
98.6
Larval Malpighian Tubules
58.4
Larval Fat Body
58.4
Larval Salivary Gland
143.6
Larval Trachea
189.375
Larval Carcass
100.525
Adult Head
86.6
Adult Eye
62.15
Adult Brain
93.7
Adult Thoracic-Abdominal Ganglion
101.1
Adult Crop
87.7
Adult Midgut
94.8
Adult Hindgut
79.6
Adult Malpighian Tubules
82.7
Adult Fat Body
118.4
Adult Salivary Gland
138.2
Adult Heart
88.275
Adult VirginFemale Spermatheca
126.7
Adult InseminatedFemale Spermatheca
178.2
Adult Ovary
368
Adult Testis
34.6
Adult Male Accessory Gland
185.4
Adult Carcass
97.4
Expression Level Scale
None
Low
Moderate
High
Linear, scaled to High level expression
Tissue
Expression Level
Larval Central Nervous System
156.625
Larval Midgut
67.3
Larval Hindgut
98.6
Larval Malpighian Tubules
58.4
Larval Fat Body
58.4
Larval Salivary Gland
143.6
Larval Trachea
189.375
Larval Carcass
100.525
Adult Head
86.6
Adult Eye
62.15
Adult Brain
93.7
Adult Thoracic-Abdominal Ganglion
101.1
Adult Crop
87.7
Adult Midgut
94.8
Adult Hindgut
79.6
Adult Malpighian Tubules
82.7
Adult Fat Body
118.4
Adult Salivary Gland
138.2
Adult Heart
88.275
Adult VirginFemale Spermatheca
126.7
Adult InseminatedFemale Spermatheca
178.2
Adult Ovary
368
Adult Testis
34.6
Adult Male Accessory Gland
185.4
Adult Carcass
97.4
Expression Level Scale
None
Low
Moderate
High
Very high
Linear, scaled to Very high expression
Tissue
Expression Level
Larval Central Nervous System
156.625
Larval Midgut
67.3
Larval Hindgut
98.6
Larval Malpighian Tubules
58.4
Larval Fat Body
58.4
Larval Salivary Gland
143.6
Larval Trachea
189.375
Larval Carcass
100.525
Adult Head
86.6
Adult Eye
62.15
Adult Brain
93.7
Adult Thoracic-Abdominal Ganglion
101.1
Adult Crop
87.7
Adult Midgut
94.8
Adult Hindgut
79.6
Adult Malpighian Tubules
82.7
Adult Fat Body
118.4
Adult Salivary Gland
138.2
Adult Heart
88.275
Adult VirginFemale Spermatheca
126.7
Adult InseminatedFemale Spermatheca
178.2
Adult Ovary
368
Adult Testis
34.6
Adult Male Accessory Gland
185.4
Adult Carcass
97.4
Expression Level Scale
Very high
log, scaled to maximum expression level
Tissue
Expression Level
Larval Central Nervous System
156.625
Larval Midgut
67.3
Larval Hindgut
98.6
Larval Malpighian Tubules
58.4
Larval Fat Body
58.4
Larval Salivary Gland
143.6
Larval Trachea
189.375
Larval Carcass
100.525
Adult Head
86.6
Adult Eye
62.15
Adult Brain
93.7
Adult Thoracic-Abdominal Ganglion
101.1
Adult Crop
87.7
Adult Midgut
94.8
Adult Hindgut
79.6
Adult Malpighian Tubules
82.7
Adult Fat Body
118.4
Adult Salivary Gland
138.2
Adult Heart
88.275
Adult VirginFemale Spermatheca
126.7
Adult InseminatedFemale Spermatheca
178.2
Adult Ovary
368
Adult Testis
34.6
Adult Male Accessory Gland
185.4
Adult Carcass
97.4
Expression Level Scale
None
Low
Moderate
High
log, scaled to Moderate expression
Tissue
Expression Level
Larval Central Nervous System
156.625
Larval Midgut
67.3
Larval Hindgut
98.6
Larval Malpighian Tubules
58.4
Larval Fat Body
58.4
Larval Salivary Gland
143.6
Larval Trachea
189.375
Larval Carcass
100.525
Adult Head
86.6
Adult Eye
62.15
Adult Brain
93.7
Adult Thoracic-Abdominal Ganglion
101.1
Adult Crop
87.7
Adult Midgut
94.8
Adult Hindgut
79.6
Adult Malpighian Tubules
82.7
Adult Fat Body
118.4
Adult Salivary Gland
138.2
Adult Heart
88.275
Adult VirginFemale Spermatheca
126.7
Adult InseminatedFemale Spermatheca
178.2
Adult Ovary
368
Adult Testis
34.6
Adult Male Accessory Gland
185.4
Adult Carcass
97.4
Expression Level Scale
None
Low
Moderate
High
log, scaled to High level expression
Tissue
Expression Level
Larval Central Nervous System
156.625
Larval Midgut
67.3
Larval Hindgut
98.6
Larval Malpighian Tubules
58.4
Larval Fat Body
58.4
Larval Salivary Gland
143.6
Larval Trachea
189.375
Larval Carcass
100.525
Adult Head
86.6
Adult Eye
62.15
Adult Brain
93.7
Adult Thoracic-Abdominal Ganglion
101.1
Adult Crop
87.7
Adult Midgut
94.8
Adult Hindgut
79.6
Adult Malpighian Tubules
82.7
Adult Fat Body
118.4
Adult Salivary Gland
138.2
Adult Heart
88.275
Adult VirginFemale Spermatheca
126.7
Adult InseminatedFemale Spermatheca
178.2
Adult Ovary
368
Adult Testis
34.6
Adult Male Accessory Gland
185.4
Adult Carcass
97.4
Expression Level Scale
None
Low
Moderate
High
Very high
log, scaled to Very high expression
Tissue
Expression Level
Larval Central Nervous System
156.625
Larval Midgut
67.3
Larval Hindgut
98.6
Larval Malpighian Tubules
58.4
Larval Fat Body
58.4
Larval Salivary Gland
143.6
Larval Trachea
189.375
Larval Carcass
100.525
Adult Head
86.6
Adult Eye
62.15
Adult Brain
93.7
Adult Thoracic-Abdominal Ganglion
101.1
Adult Crop
87.7
Adult Midgut
94.8
Adult Hindgut
79.6
Adult Malpighian Tubules
82.7
Adult Fat Body
118.4
Adult Salivary Gland
138.2
Adult Heart
88.275
Adult VirginFemale Spermatheca
126.7
Adult InseminatedFemale Spermatheca
178.2
Adult Ovary
368
Adult Testis
34.6
Adult Male Accessory Gland
185.4
Adult Carcass
97.4
Expression Level Scale
None
Low
Moderate
High
Very high
Heatmap
Tissue
Expression Level
Larval Central Nervous System
Larval Midgut
Larval Hindgut
Larval Malpighian Tubules
Larval Fat Body
Larval Salivary Gland
Larval Trachea
Larval Carcass
Adult Head
Adult Eye
Adult Brain
Adult Thoracic-Abdominal Ganglion
Adult Crop
Adult Midgut
Adult Hindgut
Adult Malpighian Tubules
Adult Fat Body
Adult Salivary Gland
Adult Heart
Adult VirginFemale Spermatheca
Adult InseminatedFemale Spermatheca
Adult Ovary
Adult Testis
Adult Male Accessory Gland
Adult Carcass
FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level
Tissue
Adult Expression Level
NA
Head
86.6
NA
Eye
62.15
NA
Brain
93.7
156.625
Central Nervous System
NA
NA
Thoracic-Abdominal Ganglion
101.1
NA
Crop
87.7
67.3
Midgut
94.8
98.6
Hindgut
79.6
58.4
Malpighian Tubules
82.7
58.4
Fat Body
118.4
143.6
Salivary Gland
138.2
NA
Heart
88.275
189.375
Trachea
NA
NA
VirginFemale Spermatheca
126.7
NA
InseminatedFemale Spermatheca
178.2
NA
Ovary
368
NA
Testis
34.6
NA
Male Accessory Gland
185.4
100.525
Carcass
97.4
modENCODE Anatomy RNA-Seq
Linear, scaled to maximum expression level
Tissue
Expression Level
imaginal disc, larvae L3 wandering
13
central nervous system, larvae L3
9
central nervous system, pupae P8
5
head, virgin 1-day female
5
head, virgin 4-day female
6
head, virgin 20-day female
6
head, mated 1-day female
6
head, mated 4-day female
12
head, mated 20-day female
5
head, mated 1-day male
7
head, mated 4-day male
7
head, mated 20-day male
8
salivary gland, larvae L3 wandering
1
salivary gland, white prepupae
0
digestive system, larvae L3 wandering
5
digestive system, 1-day adult
6
digestive system, 4-day adult
10
digestive system, 20-day adult
6
fat body, larvae L3 wandering
2
fat body, white prepupae
3
fat body, pupae P8
9
carcass, larvae L3 wandering
11
carcass, 1-day adult
5
carcass, 4-day adult
9
carcass, 20-day adult
6
ovary, virgin 4-day female
32
ovary, mated 4-day female
30
testis, mated 4-day male
7
accessory gland, mated 4-day male
4
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to Moderate expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
13
central nervous system, larvae L3
9
central nervous system, pupae P8
5
head, virgin 1-day female
5
head, virgin 4-day female
6
head, virgin 20-day female
6
head, mated 1-day female
6
head, mated 4-day female
12
head, mated 20-day female
5
head, mated 1-day male
7
head, mated 4-day male
7
head, mated 20-day male
8
salivary gland, larvae L3 wandering
1
salivary gland, white prepupae
0
digestive system, larvae L3 wandering
5
digestive system, 1-day adult
6
digestive system, 4-day adult
10
digestive system, 20-day adult
6
fat body, larvae L3 wandering
2
fat body, white prepupae
3
fat body, pupae P8
9
carcass, larvae L3 wandering
11
carcass, 1-day adult
5
carcass, 4-day adult
9
carcass, 20-day adult
6
ovary, virgin 4-day female
(32)
ovary, mated 4-day female
(30)
testis, mated 4-day male
7
accessory gland, mated 4-day male
4
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
13
central nervous system, larvae L3
9
central nervous system, pupae P8
5
head, virgin 1-day female
5
head, virgin 4-day female
6
head, virgin 20-day female
6
head, mated 1-day female
6
head, mated 4-day female
12
head, mated 20-day female
5
head, mated 1-day male
7
head, mated 4-day male
7
head, mated 20-day male
8
salivary gland, larvae L3 wandering
1
salivary gland, white prepupae
0
digestive system, larvae L3 wandering
5
digestive system, 1-day adult
6
digestive system, 4-day adult
10
digestive system, 20-day adult
6
fat body, larvae L3 wandering
2
fat body, white prepupae
3
fat body, pupae P8
9
carcass, larvae L3 wandering
11
carcass, 1-day adult
5
carcass, 4-day adult
9
carcass, 20-day adult
6
ovary, virgin 4-day female
32
ovary, mated 4-day female
30
testis, mated 4-day male
7
accessory gland, mated 4-day male
4
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
13
central nervous system, larvae L3
9
central nervous system, pupae P8
5
head, virgin 1-day female
5
head, virgin 4-day female
6
head, virgin 20-day female
6
head, mated 1-day female
6
head, mated 4-day female
12
head, mated 20-day female
5
head, mated 1-day male
7
head, mated 4-day male
7
head, mated 20-day male
8
salivary gland, larvae L3 wandering
1
salivary gland, white prepupae
0
digestive system, larvae L3 wandering
5
digestive system, 1-day adult
6
digestive system, 4-day adult
10
digestive system, 20-day adult
6
fat body, larvae L3 wandering
2
fat body, white prepupae
3
fat body, pupae P8
9
carcass, larvae L3 wandering
11
carcass, 1-day adult
5
carcass, 4-day adult
9
carcass, 20-day adult
6
ovary, virgin 4-day female
32
ovary, mated 4-day female
30
testis, mated 4-day male
7
accessory gland, mated 4-day male
4
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Tissue
Expression Level
imaginal disc, larvae L3 wandering
13
central nervous system, larvae L3
9
central nervous system, pupae P8
5
head, virgin 1-day female
5
head, virgin 4-day female
6
head, virgin 20-day female
6
head, mated 1-day female
6
head, mated 4-day female
12
head, mated 20-day female
5
head, mated 1-day male
7
head, mated 4-day male
7
head, mated 20-day male
8
salivary gland, larvae L3 wandering
1
salivary gland, white prepupae
0
digestive system, larvae L3 wandering
5
digestive system, 1-day adult
6
digestive system, 4-day adult
10
digestive system, 20-day adult
6
fat body, larvae L3 wandering
2
fat body, white prepupae
3
fat body, pupae P8
9
carcass, larvae L3 wandering
11
carcass, 1-day adult
5
carcass, 4-day adult
9
carcass, 20-day adult
6
ovary, virgin 4-day female
32
ovary, mated 4-day female
30
testis, mated 4-day male
7
accessory gland, mated 4-day male
4
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to Moderate expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
13
central nervous system, larvae L3
9
central nervous system, pupae P8
5
head, virgin 1-day female
5
head, virgin 4-day female
6
head, virgin 20-day female
6
head, mated 1-day female
6
head, mated 4-day female
12
head, mated 20-day female
5
head, mated 1-day male
7
head, mated 4-day male
7
head, mated 20-day male
8
salivary gland, larvae L3 wandering
1
salivary gland, white prepupae
0
digestive system, larvae L3 wandering
5
digestive system, 1-day adult
6
digestive system, 4-day adult
10
digestive system, 20-day adult
6
fat body, larvae L3 wandering
2
fat body, white prepupae
3
fat body, pupae P8
9
carcass, larvae L3 wandering
11
carcass, 1-day adult
5
carcass, 4-day adult
9
carcass, 20-day adult
6
ovary, virgin 4-day female
32
ovary, mated 4-day female
30
testis, mated 4-day male
7
accessory gland, mated 4-day male
4
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
13
central nervous system, larvae L3
9
central nervous system, pupae P8
5
head, virgin 1-day female
5
head, virgin 4-day female
6
head, virgin 20-day female
6
head, mated 1-day female
6
head, mated 4-day female
12
head, mated 20-day female
5
head, mated 1-day male
7
head, mated 4-day male
7
head, mated 20-day male
8
salivary gland, larvae L3 wandering
1
salivary gland, white prepupae
0
digestive system, larvae L3 wandering
5
digestive system, 1-day adult
6
digestive system, 4-day adult
10
digestive system, 20-day adult
6
fat body, larvae L3 wandering
2
fat body, white prepupae
3
fat body, pupae P8
9
carcass, larvae L3 wandering
11
carcass, 1-day adult
5
carcass, 4-day adult
9
carcass, 20-day adult
6
ovary, virgin 4-day female
32
ovary, mated 4-day female
30
testis, mated 4-day male
7
accessory gland, mated 4-day male
4
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
13
central nervous system, larvae L3
9
central nervous system, pupae P8
5
head, virgin 1-day female
5
head, virgin 4-day female
6
head, virgin 20-day female
6
head, mated 1-day female
6
head, mated 4-day female
12
head, mated 20-day female
5
head, mated 1-day male
7
head, mated 4-day male
7
head, mated 20-day male
8
salivary gland, larvae L3 wandering
1
salivary gland, white prepupae
0
digestive system, larvae L3 wandering
5
digestive system, 1-day adult
6
digestive system, 4-day adult
10
digestive system, 20-day adult
6
fat body, larvae L3 wandering
2
fat body, white prepupae
3
fat body, pupae P8
9
carcass, larvae L3 wandering
11
carcass, 1-day adult
5
carcass, 4-day adult
9
carcass, 20-day adult
6
ovary, virgin 4-day female
32
ovary, mated 4-day female
30
testis, mated 4-day male
7
accessory gland, mated 4-day male
4
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Tissue
Expression Level
imaginal disc, larvae L3 wandering
central nervous system, larvae L3
central nervous system, pupae P8
head, virgin 1-day female
head, virgin 4-day female
head, virgin 20-day female
head, mated 1-day female
head, mated 4-day female
head, mated 20-day female
head, mated 1-day male
head, mated 4-day male
head, mated 20-day male
salivary gland, larvae L3 wandering
salivary gland, white prepupae
digestive system, larvae L3 wandering
digestive system, 1-day adult
digestive system, 4-day adult
digestive system, 20-day adult
fat body, larvae L3 wandering
fat body, white prepupae
fat body, pupae P8
carcass, larvae L3 wandering
carcass, 1-day adult
carcass, 4-day adult
carcass, 20-day adult
ovary, virgin 4-day female
ovary, mated 4-day female
testis, mated 4-day male
accessory gland, mated 4-day male
modENCODE Development RNA-Seq
Linear, scaled to maximum expression level
Developmental Stage
Expression Level
embryo 00-02hr
56
embryo 02-04hr
43
embryo 04-06hr
50
embryo 06-08hr
58
embryo 08-10hr
57
embryo 10-12hr
52
embryo 12-14hr
38
embryo 14-16hr
28
embryo 16-18hr
24
embryo 18-20hr
20
embryo 20-22hr
51
embryo 22-24hr
46
larva L1
70
larva L2
32
larva L3 12hr old
20
larva L3 puffstage 1-2
11
larva L3 puffstage 3-6
13
larva L3 puffstage 7-9
15
white prepupae new
12
white prepupae 12hr
13
white prepupae 24hr
12
pupae 2d postWPP
13
pupae 3d postWPP
9
pupae 4d postWPP
9
adult male 01day
9
adult male 05day
10
adult male 30day
10
adult female 01day
33
adult female 05day
50
adult female 30day
50
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Linear, scaled to Moderate expression
Developmental Stage
Expression Level
embryo 00-02hr
(56)
embryo 02-04hr
(43)
embryo 04-06hr
(50)
embryo 06-08hr
(58)
embryo 08-10hr
(57)
embryo 10-12hr
(52)
embryo 12-14hr
(38)
embryo 14-16hr
(28)
embryo 16-18hr
24
embryo 18-20hr
20
embryo 20-22hr
(51)
embryo 22-24hr
(46)
larva L1
(70)
larva L2
(32)
larva L3 12hr old
20
larva L3 puffstage 1-2
11
larva L3 puffstage 3-6
13
larva L3 puffstage 7-9
15
white prepupae new
12
white prepupae 12hr
13
white prepupae 24hr
12
pupae 2d postWPP
13
pupae 3d postWPP
9
pupae 4d postWPP
9
adult male 01day
9
adult male 05day
10
adult male 30day
10
adult female 01day
(33)
adult female 05day
(50)
adult female 30day
(50)
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Developmental Stage
Expression Level
embryo 00-02hr
56
embryo 02-04hr
43
embryo 04-06hr
50
embryo 06-08hr
58
embryo 08-10hr
57
embryo 10-12hr
52
embryo 12-14hr
38
embryo 14-16hr
28
embryo 16-18hr
24
embryo 18-20hr
20
embryo 20-22hr
51
embryo 22-24hr
46
larva L1
70
larva L2
32
larva L3 12hr old
20
larva L3 puffstage 1-2
11
larva L3 puffstage 3-6
13
larva L3 puffstage 7-9
15
white prepupae new
12
white prepupae 12hr
13
white prepupae 24hr
12
pupae 2d postWPP
13
pupae 3d postWPP
9
pupae 4d postWPP
9
adult male 01day
9
adult male 05day
10
adult male 30day
10
adult female 01day
33
adult female 05day
50
adult female 30day
50
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Developmental Stage
Expression Level
embryo 00-02hr
56
embryo 02-04hr
43
embryo 04-06hr
50
embryo 06-08hr
58
embryo 08-10hr
57
embryo 10-12hr
52
embryo 12-14hr
38
embryo 14-16hr
28
embryo 16-18hr
24
embryo 18-20hr
20
embryo 20-22hr
51
embryo 22-24hr
46
larva L1
70
larva L2
32
larva L3 12hr old
20
larva L3 puffstage 1-2
11
larva L3 puffstage 3-6
13
larva L3 puffstage 7-9
15
white prepupae new
12
white prepupae 12hr
13
white prepupae 24hr
12
pupae 2d postWPP
13
pupae 3d postWPP
9
pupae 4d postWPP
9
adult male 01day
9
adult male 05day
10
adult male 30day
10
adult female 01day
33
adult female 05day
50
adult female 30day
50
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Developmental Stage
Expression Level
embryo 00-02hr
56
embryo 02-04hr
43
embryo 04-06hr
50
embryo 06-08hr
58
embryo 08-10hr
57
embryo 10-12hr
52
embryo 12-14hr
38
embryo 14-16hr
28
embryo 16-18hr
24
embryo 18-20hr
20
embryo 20-22hr
51
embryo 22-24hr
46
larva L1
70
larva L2
32
larva L3 12hr old
20
larva L3 puffstage 1-2
11
larva L3 puffstage 3-6
13
larva L3 puffstage 7-9
15
white prepupae new
12
white prepupae 12hr
13
white prepupae 24hr
12
pupae 2d postWPP
13
pupae 3d postWPP
9
pupae 4d postWPP
9
adult male 01day
9
adult male 05day
10
adult male 30day
10
adult female 01day
33
adult female 05day
50
adult female 30day
50
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Moderate expression
Developmental Stage
Expression Level
embryo 00-02hr
(56)
embryo 02-04hr
(43)
embryo 04-06hr
(50)
embryo 06-08hr
(58)
embryo 08-10hr
(57)
embryo 10-12hr
(52)
embryo 12-14hr
(38)
embryo 14-16hr
28
embryo 16-18hr
24
embryo 18-20hr
20
embryo 20-22hr
(51)
embryo 22-24hr
(46)
larva L1
(70)
larva L2
32
larva L3 12hr old
20
larva L3 puffstage 1-2
11
larva L3 puffstage 3-6
13
larva L3 puffstage 7-9
15
white prepupae new
12
white prepupae 12hr
13
white prepupae 24hr
12
pupae 2d postWPP
13
pupae 3d postWPP
9
pupae 4d postWPP
9
adult male 01day
9
adult male 05day
10
adult male 30day
10
adult female 01day
(33)
adult female 05day
(50)
adult female 30day
(50)
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Developmental Stage
Expression Level
embryo 00-02hr
56
embryo 02-04hr
43
embryo 04-06hr
50
embryo 06-08hr
58
embryo 08-10hr
57
embryo 10-12hr
52
embryo 12-14hr
38
embryo 14-16hr
28
embryo 16-18hr
24
embryo 18-20hr
20
embryo 20-22hr
51
embryo 22-24hr
46
larva L1
70
larva L2
32
larva L3 12hr old
20
larva L3 puffstage 1-2
11
larva L3 puffstage 3-6
13
larva L3 puffstage 7-9
15
white prepupae new
12
white prepupae 12hr
13
white prepupae 24hr
12
pupae 2d postWPP
13
pupae 3d postWPP
9
pupae 4d postWPP
9
adult male 01day
9
adult male 05day
10
adult male 30day
10
adult female 01day
33
adult female 05day
50
adult female 30day
50
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Developmental Stage
Expression Level
embryo 00-02hr
56
embryo 02-04hr
43
embryo 04-06hr
50
embryo 06-08hr
58
embryo 08-10hr
57
embryo 10-12hr
52
embryo 12-14hr
38
embryo 14-16hr
28
embryo 16-18hr
24
embryo 18-20hr
20
embryo 20-22hr
51
embryo 22-24hr
46
larva L1
70
larva L2
32
larva L3 12hr old
20
larva L3 puffstage 1-2
11
larva L3 puffstage 3-6
13
larva L3 puffstage 7-9
15
white prepupae new
12
white prepupae 12hr
13
white prepupae 24hr
12
pupae 2d postWPP
13
pupae 3d postWPP
9
pupae 4d postWPP
9
adult male 01day
9
adult male 05day
10
adult male 30day
10
adult female 01day
33
adult female 05day
50
adult female 30day
50
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Developmental Stage
Expression Level
embryo 00-02hr
embryo 02-04hr
embryo 04-06hr
embryo 06-08hr
embryo 08-10hr
embryo 10-12hr
embryo 12-14hr
embryo 14-16hr
embryo 16-18hr
embryo 18-20hr
embryo 20-22hr
embryo 22-24hr
larva L1
larva L2
larva L3 12hr old
larva L3 puffstage 1-2
larva L3 puffstage 3-6
larva L3 puffstage 7-9
white prepupae new
white prepupae 12hr
white prepupae 24hr
pupae 2d postWPP
pupae 3d postWPP
pupae 4d postWPP
adult male 01day
adult male 05day
adult male 30day
adult female 01day
adult female 05day
adult female 30day
modENCODE Cell Lines RNA-Seq
Linear, scaled to maximum expression level
Cell Line
Expression Level
Schneider line 2 S2R+
34
Schneider line 2 Sg4
31
embryonic 1182-4H
15
embryonic GM2
24
embryonic Kc167
20
embryonic S1
19
embryonic S3
19
leg disc CME L1
28
wing disc CME-W2
17
wing disc ML-DmD8
21
wing disc ML-DmD9
19
wing disc ML-DmD16-c3
27
wing disc ML-DmD21
30
wing disc ML-DmD32
21
haltere disc ML-DmD17-c3
22
eye-antennal disc ML-DmD11
20
antennal disc ML-DmD20-c5
21
mixed discs ML-DmD4-c1
26
CNS ML-DmBG1-c1
27
CNS ML-DmBG2-c2
28
tumorous blood cells mbn2
17
ovary fGS/OSS
13
ovary OSC
12
ovary OSS
8
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to Moderate expression
Cell Line
Expression Level
Schneider line 2 S2R+
(34)
Schneider line 2 Sg4
(31)
embryonic 1182-4H
15
embryonic GM2
24
embryonic Kc167
20
embryonic S1
19
embryonic S3
19
leg disc CME L1
(28)
wing disc CME-W2
17
wing disc ML-DmD8
21
wing disc ML-DmD9
19
wing disc ML-DmD16-c3
(27)
wing disc ML-DmD21
(30)
wing disc ML-DmD32
21
haltere disc ML-DmD17-c3
22
eye-antennal disc ML-DmD11
20
antennal disc ML-DmD20-c5
21
mixed discs ML-DmD4-c1
26
CNS ML-DmBG1-c1
(27)
CNS ML-DmBG2-c2
(28)
tumorous blood cells mbn2
17
ovary fGS/OSS
13
ovary OSC
12
ovary OSS
8
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Cell Line
Expression Level
Schneider line 2 S2R+
34
Schneider line 2 Sg4
31
embryonic 1182-4H
15
embryonic GM2
24
embryonic Kc167
20
embryonic S1
19
embryonic S3
19
leg disc CME L1
28
wing disc CME-W2
17
wing disc ML-DmD8
21
wing disc ML-DmD9
19
wing disc ML-DmD16-c3
27
wing disc ML-DmD21
30
wing disc ML-DmD32
21
haltere disc ML-DmD17-c3
22
eye-antennal disc ML-DmD11
20
antennal disc ML-DmD20-c5
21
mixed discs ML-DmD4-c1
26
CNS ML-DmBG1-c1
27
CNS ML-DmBG2-c2
28
tumorous blood cells mbn2
17
ovary fGS/OSS
13
ovary OSC
12
ovary OSS
8
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Cell Line
Expression Level
Schneider line 2 S2R+
34
Schneider line 2 Sg4
31
embryonic 1182-4H
15
embryonic GM2
24
embryonic Kc167
20
embryonic S1
19
embryonic S3
19
leg disc CME L1
28
wing disc CME-W2
17
wing disc ML-DmD8
21
wing disc ML-DmD9
19
wing disc ML-DmD16-c3
27
wing disc ML-DmD21
30
wing disc ML-DmD32
21
haltere disc ML-DmD17-c3
22
eye-antennal disc ML-DmD11
20
antennal disc ML-DmD20-c5
21
mixed discs ML-DmD4-c1
26
CNS ML-DmBG1-c1
27
CNS ML-DmBG2-c2
28
tumorous blood cells mbn2
17
ovary fGS/OSS
13
ovary OSC
12
ovary OSS
8
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Cell Line
Expression Level
Schneider line 2 S2R+
34
Schneider line 2 Sg4
31
embryonic 1182-4H
15
embryonic GM2
24
embryonic Kc167
20
embryonic S1
19
embryonic S3
19
leg disc CME L1
28
wing disc CME-W2
17
wing disc ML-DmD8
21
wing disc ML-DmD9
19
wing disc ML-DmD16-c3
27
wing disc ML-DmD21
30
wing disc ML-DmD32
21
haltere disc ML-DmD17-c3
22
eye-antennal disc ML-DmD11
20
antennal disc ML-DmD20-c5
21
mixed discs ML-DmD4-c1
26
CNS ML-DmBG1-c1
27
CNS ML-DmBG2-c2
28
tumorous blood cells mbn2
17
ovary fGS/OSS
13
ovary OSC
12
ovary OSS
8
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to Moderate expression
Cell Line
Expression Level
Schneider line 2 S2R+
(34)
Schneider line 2 Sg4
31
embryonic 1182-4H
15
embryonic GM2
24
embryonic Kc167
20
embryonic S1
19
embryonic S3
19
leg disc CME L1
28
wing disc CME-W2
17
wing disc ML-DmD8
21
wing disc ML-DmD9
19
wing disc ML-DmD16-c3
27
wing disc ML-DmD21
30
wing disc ML-DmD32
21
haltere disc ML-DmD17-c3
22
eye-antennal disc ML-DmD11
20
antennal disc ML-DmD20-c5
21
mixed discs ML-DmD4-c1
26
CNS ML-DmBG1-c1
27
CNS ML-DmBG2-c2
28
tumorous blood cells mbn2
17
ovary fGS/OSS
13
ovary OSC
12
ovary OSS
8
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Cell Line
Expression Level
Schneider line 2 S2R+
34
Schneider line 2 Sg4
31
embryonic 1182-4H
15
embryonic GM2
24
embryonic Kc167
20
embryonic S1
19
embryonic S3
19
leg disc CME L1
28
wing disc CME-W2
17
wing disc ML-DmD8
21
wing disc ML-DmD9
19
wing disc ML-DmD16-c3
27
wing disc ML-DmD21
30
wing disc ML-DmD32
21
haltere disc ML-DmD17-c3
22
eye-antennal disc ML-DmD11
20
antennal disc ML-DmD20-c5
21
mixed discs ML-DmD4-c1
26
CNS ML-DmBG1-c1
27
CNS ML-DmBG2-c2
28
tumorous blood cells mbn2
17
ovary fGS/OSS
13
ovary OSC
12
ovary OSS
8
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Cell Line
Expression Level
Schneider line 2 S2R+
34
Schneider line 2 Sg4
31
embryonic 1182-4H
15
embryonic GM2
24
embryonic Kc167
20
embryonic S1
19
embryonic S3
19
leg disc CME L1
28
wing disc CME-W2
17
wing disc ML-DmD8
21
wing disc ML-DmD9
19
wing disc ML-DmD16-c3
27
wing disc ML-DmD21
30
wing disc ML-DmD32
21
haltere disc ML-DmD17-c3
22
eye-antennal disc ML-DmD11
20
antennal disc ML-DmD20-c5
21
mixed discs ML-DmD4-c1
26
CNS ML-DmBG1-c1
27
CNS ML-DmBG2-c2
28
tumorous blood cells mbn2
17
ovary fGS/OSS
13
ovary OSC
12
ovary OSS
8
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Cell Line
Expression Level
Schneider line 2 S2R+
Schneider line 2 Sg4
embryonic 1182-4H
embryonic GM2
embryonic Kc167
embryonic S1
embryonic S3
leg disc CME L1
wing disc CME-W2
wing disc ML-DmD8
wing disc ML-DmD9
wing disc ML-DmD16-c3
wing disc ML-DmD21
wing disc ML-DmD32
haltere disc ML-DmD17-c3
eye-antennal disc ML-DmD11
antennal disc ML-DmD20-c5
mixed discs ML-DmD4-c1
CNS ML-DmBG1-c1
CNS ML-DmBG2-c2
tumorous blood cells mbn2
ovary fGS/OSS
ovary OSC
ovary OSS
modENCODE Treatments RNA-Seq
Linear, scaled to maximum expression level
Treatment
Expression Level
extended cold, 4-day adult
8
cold shock, 4-day adult
6
heat shock, 4-day adult
16
Cadmium 50 mM 6 hrs, larvae L3
10
Cadmium 50 mM 12 hrs, larvae L3
7
Cadmium 50 mM 48 hrs, 4-day adult
15
Cadmium 100 mM 48 hrs, 4-day adult
17
Copper 0.5 mM 12 hrs, larvae L3
7
Copper 15 mM 48 hrs, 4-day adult
11
Zinc 5 mM 12 hrs, larvae L3
5
Zinc 4.5 mM 48 hrs, 4-day adult
9
Ethanol 2.5% 3 hrs, larvae L3
21
Ethanol 5% 3 hrs, larvae L3
4
Ethanol 10% 3 hrs, larvae L3
8
Caffeine 1.5 mg/ml 4 hrs, larvae L3
4
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
15
Caffeine 25 mg/ml 48 hrs, 4-day adult
9
Paraquat 5 mM 48 hrs, 4-day adult
22
Paraquat 10 mM 48 hrs, 4-day adult
22
Rotenone 2 μg 12 hrs, larvae L3
9
Rotenone 8 μg 12 hrs, larvae L3
8
Expression Level Scale
Very low
Low
Moderate
Linear, scaled to Moderate expression
Treatment
Expression Level
extended cold, 4-day adult
8
cold shock, 4-day adult
6
heat shock, 4-day adult
16
Cadmium 50 mM 6 hrs, larvae L3
10
Cadmium 50 mM 12 hrs, larvae L3
7
Cadmium 50 mM 48 hrs, 4-day adult
15
Cadmium 100 mM 48 hrs, 4-day adult
17
Copper 0.5 mM 12 hrs, larvae L3
7
Copper 15 mM 48 hrs, 4-day adult
11
Zinc 5 mM 12 hrs, larvae L3
5
Zinc 4.5 mM 48 hrs, 4-day adult
9
Ethanol 2.5% 3 hrs, larvae L3
21
Ethanol 5% 3 hrs, larvae L3
4
Ethanol 10% 3 hrs, larvae L3
8
Caffeine 1.5 mg/ml 4 hrs, larvae L3
4
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
15
Caffeine 25 mg/ml 48 hrs, 4-day adult
9
Paraquat 5 mM 48 hrs, 4-day adult
22
Paraquat 10 mM 48 hrs, 4-day adult
22
Rotenone 2 μg 12 hrs, larvae L3
9
Rotenone 8 μg 12 hrs, larvae L3
8
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Treatment
Expression Level
extended cold, 4-day adult
8
cold shock, 4-day adult
6
heat shock, 4-day adult
16
Cadmium 50 mM 6 hrs, larvae L3
10
Cadmium 50 mM 12 hrs, larvae L3
7
Cadmium 50 mM 48 hrs, 4-day adult
15
Cadmium 100 mM 48 hrs, 4-day adult
17
Copper 0.5 mM 12 hrs, larvae L3
7
Copper 15 mM 48 hrs, 4-day adult
11
Zinc 5 mM 12 hrs, larvae L3
5
Zinc 4.5 mM 48 hrs, 4-day adult
9
Ethanol 2.5% 3 hrs, larvae L3
21
Ethanol 5% 3 hrs, larvae L3
4
Ethanol 10% 3 hrs, larvae L3
8
Caffeine 1.5 mg/ml 4 hrs, larvae L3
4
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
15
Caffeine 25 mg/ml 48 hrs, 4-day adult
9
Paraquat 5 mM 48 hrs, 4-day adult
22
Paraquat 10 mM 48 hrs, 4-day adult
22
Rotenone 2 μg 12 hrs, larvae L3
9
Rotenone 8 μg 12 hrs, larvae L3
8
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Treatment
Expression Level
extended cold, 4-day adult
8
cold shock, 4-day adult
6
heat shock, 4-day adult
16
Cadmium 50 mM 6 hrs, larvae L3
10
Cadmium 50 mM 12 hrs, larvae L3
7
Cadmium 50 mM 48 hrs, 4-day adult
15
Cadmium 100 mM 48 hrs, 4-day adult
17
Copper 0.5 mM 12 hrs, larvae L3
7
Copper 15 mM 48 hrs, 4-day adult
11
Zinc 5 mM 12 hrs, larvae L3
5
Zinc 4.5 mM 48 hrs, 4-day adult
9
Ethanol 2.5% 3 hrs, larvae L3
21
Ethanol 5% 3 hrs, larvae L3
4
Ethanol 10% 3 hrs, larvae L3
8
Caffeine 1.5 mg/ml 4 hrs, larvae L3
4
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
15
Caffeine 25 mg/ml 48 hrs, 4-day adult
9
Paraquat 5 mM 48 hrs, 4-day adult
22
Paraquat 10 mM 48 hrs, 4-day adult
22
Rotenone 2 μg 12 hrs, larvae L3
9
Rotenone 8 μg 12 hrs, larvae L3
8
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Treatment
Expression Level
extended cold, 4-day adult
8
cold shock, 4-day adult
6
heat shock, 4-day adult
16
Cadmium 50 mM 6 hrs, larvae L3
10
Cadmium 50 mM 12 hrs, larvae L3
7
Cadmium 50 mM 48 hrs, 4-day adult
15
Cadmium 100 mM 48 hrs, 4-day adult
17
Copper 0.5 mM 12 hrs, larvae L3
7
Copper 15 mM 48 hrs, 4-day adult
11
Zinc 5 mM 12 hrs, larvae L3
5
Zinc 4.5 mM 48 hrs, 4-day adult
9
Ethanol 2.5% 3 hrs, larvae L3
21
Ethanol 5% 3 hrs, larvae L3
4
Ethanol 10% 3 hrs, larvae L3
8
Caffeine 1.5 mg/ml 4 hrs, larvae L3
4
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
15
Caffeine 25 mg/ml 48 hrs, 4-day adult
9
Paraquat 5 mM 48 hrs, 4-day adult
22
Paraquat 10 mM 48 hrs, 4-day adult
22
Rotenone 2 μg 12 hrs, larvae L3
9
Rotenone 8 μg 12 hrs, larvae L3
8
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to Moderate expression
Treatment
Expression Level
extended cold, 4-day adult
8
cold shock, 4-day adult
6
heat shock, 4-day adult
16
Cadmium 50 mM 6 hrs, larvae L3
10
Cadmium 50 mM 12 hrs, larvae L3
7
Cadmium 50 mM 48 hrs, 4-day adult
15
Cadmium 100 mM 48 hrs, 4-day adult
17
Copper 0.5 mM 12 hrs, larvae L3
7
Copper 15 mM 48 hrs, 4-day adult
11
Zinc 5 mM 12 hrs, larvae L3
5
Zinc 4.5 mM 48 hrs, 4-day adult
9
Ethanol 2.5% 3 hrs, larvae L3
21
Ethanol 5% 3 hrs, larvae L3
4
Ethanol 10% 3 hrs, larvae L3
8
Caffeine 1.5 mg/ml 4 hrs, larvae L3
4
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
15
Caffeine 25 mg/ml 48 hrs, 4-day adult
9
Paraquat 5 mM 48 hrs, 4-day adult
22
Paraquat 10 mM 48 hrs, 4-day adult
22
Rotenone 2 μg 12 hrs, larvae L3
9
Rotenone 8 μg 12 hrs, larvae L3
8
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Treatment
Expression Level
extended cold, 4-day adult
8
cold shock, 4-day adult
6
heat shock, 4-day adult
16
Cadmium 50 mM 6 hrs, larvae L3
10
Cadmium 50 mM 12 hrs, larvae L3
7
Cadmium 50 mM 48 hrs, 4-day adult
15
Cadmium 100 mM 48 hrs, 4-day adult
17
Copper 0.5 mM 12 hrs, larvae L3
7
Copper 15 mM 48 hrs, 4-day adult
11
Zinc 5 mM 12 hrs, larvae L3
5
Zinc 4.5 mM 48 hrs, 4-day adult
9
Ethanol 2.5% 3 hrs, larvae L3
21
Ethanol 5% 3 hrs, larvae L3
4
Ethanol 10% 3 hrs, larvae L3
8
Caffeine 1.5 mg/ml 4 hrs, larvae L3
4
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
15
Caffeine 25 mg/ml 48 hrs, 4-day adult
9
Paraquat 5 mM 48 hrs, 4-day adult
22
Paraquat 10 mM 48 hrs, 4-day adult
22
Rotenone 2 μg 12 hrs, larvae L3
9
Rotenone 8 μg 12 hrs, larvae L3
8
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Treatment
Expression Level
extended cold, 4-day adult
8
cold shock, 4-day adult
6
heat shock, 4-day adult
16
Cadmium 50 mM 6 hrs, larvae L3
10
Cadmium 50 mM 12 hrs, larvae L3
7
Cadmium 50 mM 48 hrs, 4-day adult
15
Cadmium 100 mM 48 hrs, 4-day adult
17
Copper 0.5 mM 12 hrs, larvae L3
7
Copper 15 mM 48 hrs, 4-day adult
11
Zinc 5 mM 12 hrs, larvae L3
5
Zinc 4.5 mM 48 hrs, 4-day adult
9
Ethanol 2.5% 3 hrs, larvae L3
21
Ethanol 5% 3 hrs, larvae L3
4
Ethanol 10% 3 hrs, larvae L3
8
Caffeine 1.5 mg/ml 4 hrs, larvae L3
4
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
15
Caffeine 25 mg/ml 48 hrs, 4-day adult
9
Paraquat 5 mM 48 hrs, 4-day adult
22
Paraquat 10 mM 48 hrs, 4-day adult
22
Rotenone 2 μg 12 hrs, larvae L3
9
Rotenone 8 μg 12 hrs, larvae L3
8
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Treatment
Expression Level
extended cold, 4-day adult
cold shock, 4-day adult
heat shock, 4-day adult
Cadmium 50 mM 6 hrs, larvae L3
Cadmium 50 mM 12 hrs, larvae L3
Cadmium 50 mM 48 hrs, 4-day adult
Cadmium 100 mM 48 hrs, 4-day adult
Copper 0.5 mM 12 hrs, larvae L3
Copper 15 mM 48 hrs, 4-day adult
Zinc 5 mM 12 hrs, larvae L3
Zinc 4.5 mM 48 hrs, 4-day adult
Ethanol 2.5% 3 hrs, larvae L3
Ethanol 5% 3 hrs, larvae L3
Ethanol 10% 3 hrs, larvae L3
Caffeine 1.5 mg/ml 4 hrs, larvae L3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
Caffeine 25 mg/ml 48 hrs, 4-day adult
Paraquat 5 mM 48 hrs, 4-day adult
Paraquat 10 mM 48 hrs, 4-day adult
Rotenone 2 μg 12 hrs, larvae L3
Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
External Data & Images
Linkouts
- Cell culture data for RNAi and other high-throughput technologies
- Adult expression by tissue, using Affymetrix Dros2 array
Alleles & Phenotypes Summary of Allele Phenotypes Classical Alleles ( 0 ) For All Classical Alleles Show Allele of
bys Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs
( 3 ) For All Alleles Carried on Transgenic
Constructs Show Aneuploid Aberrations Disrupted in Duplicated in Transgenic Constructs & Insertions
Transgenic Constructs Insertions Gene Ontology: Function, Process
& Cellular Component ( 2 unique terms )There is no information supporting a
molecular function term for this gene.
(Based on a review of available data before: 2006)
Terms Based on
Experimental Evidence ( 2 terms ) Molecular Function ( 0 terms) Biological Process inferred from mutant phenotype
Cellular Component inferred from direct assay
Terms Based on Predictions or
Assertions ( 0 terms ) Sequence Ontology: Class of Gene Interactions & Pathways
Summary of Physical Interactions
protein-protein anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
Summary of Genetic Interactions Interacts with Please look at the allele data
for full details of the genetic interactions
External Data Linkouts
- A database of protein and genetic interactions
- DPiM, Drosophila Protein interaction Map
- A comprehensive database of gene and protein interactions.
Protein-protein interactions (PPI) from both known and predicted PPI data sets.
Orthologs
OrthoDB Orthologs (36)
- based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
OrthoDB orthology group searches
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
Insect inclusive ortholog search
Arthropod inclusive ortholog search
Metazoa inclusive ortholog search
Orthologs in Drosophila Species
(EOG6V17KM )
Drosophila melanogaster
fruit fly
Drosophila pseudoobscura pseudoobscura
Y
Orthologs in non-Drosophila Dipterans
(EOG602X1R )
Aedes aegypti
Yellow fever mosquito
Anopheles gambiae
Malaria mosquito
Culex quinquefasciatus
Southern house mosquito
Orthologs in non-Dipteran Insects
(EOG6V15WB )
Apis mellifera
Western honey bee
Amel\bys
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG008233
Acromyrmex echinatior
Panamanian leafcutter ant
Aech\AECH24029
Atta cephalotes
Leafcutter ant
Acep\ACEP18165
Camponotus floridanus
Florida carpenter ant
Cflo\CFLO15587
Harpegnathos saltator
Jerdons jumping ant
Hsal\HSAL19976
Linepithema humile
Argentine ant
Lhum\LH17245
Pogonomyrmex barbatus
Red harvester ant
Pbar\PB21119
Acyrthosiphon pisum
Pea aphid
Pediculus humanus
Human body louse
Tribolium castaneum
Red flour beetle
Orthologs in non-Insect Arthropods
(EOG68932X )
Ixodes scapularis
Deer tick
Orthologs in non-Arthropod Metazoa
(EOG625JM9 )
Caenorhabditis elegans
Nematode
Strongylocentrotus purpuratus
Purple sea urchin
Xenopus tropicalis
Western clawed frog
Gallus gallus
Domestic chicken
Human Orthologs (1)AAA Orthologs (11)
based on analysis using Dmel annotation version 4.3
Drosophila pseudoobscura pseudoobscura
Stocks & Reagents Stocks Listed in FlyBase ( 2 )Bloomington VDRC Genomic Clones ( 1 )Please Note FlyBase no
longer curates genomic clone accessions so this list
may not be complete
cDNA Clones ( 34 )Please Note This section lists
cDNAs and ESTs that fall within the genomic extent
of the gene model, which may include cDNAs and ESTs
of genes within introns, or of overlapping genes.
Please see
GBrowse for alignment of the cDNAs and ESTs
to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones Other clones cDNA Clones, End Sequenced
(ESTs) BDGP DGC clones Other clones RNAi & Array Information Linkouts
- Results from RNAi screens.
- GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
Antibody Information
Other Information Discoverer Etymology Identification Relationship to Other Genes Source for database identity of Source for identity of: bys CG1430
Source for database merge of Additional comments Other Comments dsRNA made from templates generated with primers directed against this gene in combination with dsRNA against
gig results in suppression of the final average cell size, with it being closer to the control average cell size, rather than the average cell size resulting from knockdown of the candidate gene alone.
External Crossreferences & Linkouts
Sequence Crossreferences
- A searchable database of RefSeq genes.
Other Crossreferences
domains - A database of protein families, domains, and functional sites
- Patterns of gene expression in Drosophila embryogenesis
Linkouts
- A database of protein and genetic interactions
- DPiM, Drosophila Protein interaction Map
- A comprehensive database of gene and protein interactions.
- Results from RNAi screens.
- Cell culture data for RNAi and other high-throughput technologies
- Adult expression by tissue, using Affymetrix Dros2 array
- Integrated genomics database for Drosophila, Anopheles, and C.elegans
- GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
Protein-protein interactions (PPI) from both known and predicted PPI data sets.
- Data generated by the modENCODE project.
Synonyms & Secondary IDs
( 5 )Reported As Symbol Synonym Name Synonym Secondary FlyBase
IDs References ( 28 )Generate a list of List References by type
Recent research papers (0)
All research papers listed in FlyBase were published before 2011