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Gene Dmel\Dbi

General Information
Symbol	Dmel\Dbi	Species	D. melanogaster
Name	Diazepam-binding inhibitor	Annotation symbol	CG8627
Feature type	protein_coding_gene	FlyBase ID	FBgn0010387
Gene Model Status	Current	Stock availability	2 publicly available
Also Known As	ACBP
Genomic Location
Chromosome (arm)	3L	Recombination map	3-
Cytogenetic map	65E4-65E4	Sequence location	3L:7,124,963..7,126,563 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Diazepam-binding inhibitor is referred to in FlyBase by the symbol Dmel\Dbi (CG8627, FBgn0010387). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: diazepam binding; enzyme inhibitor activity; fatty-acyl-CoA binding. Based on sequence similarity, it is predicted to be involved in the biological process: cellular acyl-CoA homeostasis. One allele is reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Acyl-CoA-binding protein, ACBP; Acyl-CoA-binding protein, ACBP, conserved site; FERM/acyl-CoA-binding protein, 3-helical bundle. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of very low expression. Peak expression observed within 12-24 hour embryonic stages, at stages throughout the larval period, during late pupal stages, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at high levels. Expression at high levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, adult heart, larval/adult fat body, larval trachea, adult spermathecae, adult male accessory gland, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, adult Malpighian tubules, adult salivary gland, adult testis, larval carcass. Comments on Affy2 ProbeSet: ProbeSet 1625572_s_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of Dbi. Gene sequence location is 3L:7124963..7126563.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 65E4-65E4   Limits computationally determined from genome sequence between P{lacW}l(3)L4060L4060 and P{PZ}corn04202
Experimentally Determined Cytological Location
Cytogenetic map Notes References 65E-65E     (Roos, 1993.12.30) 65E3-65E9   (determined by in situ hybridisation)   (Kolmer et al., 1994)
Experimentally Determined Recombination Data
Location	3- (Roos, 1993.12.30, )
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Dbi for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.43 Gene model reviewed during 5.46 Low-frequency RNA-Seq exon junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Dbi-RA FBtr0076915  NM_168192   420   86 Dbi-RB FBtr0076916  NM_079228   386   86
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Dbi-PA   FBpp0076624   9.6   86   8.90     NP_729218   AAF50607 Dbi-PB   FBpp0076625   9.6   86   8.90     NP_523952   AAN12074
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Acyl-CoA-binding protein, ACBP (IPR000582) FERM/acyl-CoA-binding protein, 3-helical bundle (IPR014352) Acyl-CoA-binding protein, ACBP, conserved site (IPR022408)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014296 AAF50607   AE014296 AAN12074   AI517296   AX260169   AY070704 AAL48175   BI568148   BI622698   BP546443   BQ103571   CO181607   CO297987   CO313377   CO322148   CO326442   EC069947   EC073875   EC079566   EC196283   EC200544   EC231260   EC236247   EC242672   EC248499   EC256830   EV576631   EV577653   EV593106   GH941664   GH947191   GH969109   GH971180   GH973246   U04822 AAA21649   U04823 AAA21650   X75596 CAA53268
UniProtKB/Swiss-Prot	P42281
UniProtKB/TrEMBL
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 9 -- 10   amnioserosa   (Fisher et al., 2012) embryonic stage 11 -- 12   yolk nucleus   (Fisher et al., 2012) embryonic stage 13 -- 16   embryonic midgut chamber   (Fisher et al., 2012) embryonic/larval fat body   (Fisher et al., 2012) embryonic/larval midgut   (Fisher et al., 2012) yolk nucleus   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
mass spectroscopy Stage Tissue/Position (including subcellular localization) Reference day 7 of adulthood -- day 49 of adulthood   adult heart   (Cammarato et al., 2011)
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at high levels. Expression at high levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, adult heart, larval/adult fat body, larval trachea, adult spermathecae, adult male accessory gland, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, adult Malpighian tubules, adult salivary gland, adult testis, larval carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    715.525 Larval Midgut    5379.3 Larval Hindgut    600.6 Larval Malpighian Tubules    68.8 Larval Fat Body    600.9 Larval Salivary Gland    41.5 Larval Trachea    578.5 Larval Carcass    379.675 Adult Head    1954.3 Adult Eye    470.125 Adult Brain    531.5 Adult Thoracic-Abdominal Ganglion    683.4 Adult Crop    5971.6 Adult Midgut    5606.8 Adult Hindgut    4751.4 Adult Malpighian Tubules    124.6 Adult Fat Body    5244.6 Adult Salivary Gland    178.6 Adult Heart    5752.5 Adult VirginFemale Spermatheca    2657.2 Adult InseminatedFemale Spermatheca    1690.3 Adult Ovary    10.2 Adult Testis    309.3 Adult Male Accessory Gland    1633.9 Adult Carcass    5520.5 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  (715.525) Larval Midgut  (5379.3) Larval Hindgut  (600.6) Larval Malpighian Tubules    68.8 Larval Fat Body  (600.9) Larval Salivary Gland    41.5 Larval Trachea  (578.5) Larval Carcass    379.675 Adult Head  (1954.3) Adult Eye    470.125 Adult Brain  531.5 Adult Thoracic-Abdominal Ganglion  (683.4) Adult Crop  (5971.6) Adult Midgut  (5606.8) Adult Hindgut  (4751.4) Adult Malpighian Tubules    124.6 Adult Fat Body  (5244.6) Adult Salivary Gland    178.6 Adult Heart  (5752.5) Adult VirginFemale Spermatheca  (2657.2) Adult InseminatedFemale Spermatheca  (1690.3) Adult Ovary    10.2 Adult Testis    309.3 Adult Male Accessory Gland  (1633.9) Adult Carcass  (5520.5) Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    715.525 Larval Midgut  (5379.3) Larval Hindgut    600.6 Larval Malpighian Tubules    68.8 Larval Fat Body    600.9 Larval Salivary Gland    41.5 Larval Trachea    578.5 Larval Carcass    379.675 Adult Head  (1954.3) Adult Eye    470.125 Adult Brain    531.5 Adult Thoracic-Abdominal Ganglion    683.4 Adult Crop  (5971.6) Adult Midgut  (5606.8) Adult Hindgut  (4751.4) Adult Malpighian Tubules    124.6 Adult Fat Body  (5244.6) Adult Salivary Gland    178.6 Adult Heart  (5752.5) Adult VirginFemale Spermatheca  (2657.2) Adult InseminatedFemale Spermatheca  (1690.3) Adult Ovary    10.2 Adult Testis    309.3 Adult Male Accessory Gland  (1633.9) Adult Carcass  (5520.5) Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    715.525 Larval Midgut    5379.3 Larval Hindgut    600.6 Larval Malpighian Tubules    68.8 Larval Fat Body    600.9 Larval Salivary Gland    41.5 Larval Trachea    578.5 Larval Carcass    379.675 Adult Head    1954.3 Adult Eye    470.125 Adult Brain    531.5 Adult Thoracic-Abdominal Ganglion    683.4 Adult Crop    5971.6 Adult Midgut    5606.8 Adult Hindgut    4751.4 Adult Malpighian Tubules    124.6 Adult Fat Body    5244.6 Adult Salivary Gland    178.6 Adult Heart    5752.5 Adult VirginFemale Spermatheca    2657.2 Adult InseminatedFemale Spermatheca    1690.3 Adult Ovary    10.2 Adult Testis    309.3 Adult Male Accessory Gland    1633.9 Adult Carcass    5520.5 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    715.525 Larval Midgut    5379.3 Larval Hindgut    600.6 Larval Malpighian Tubules    68.8 Larval Fat Body    600.9 Larval Salivary Gland    41.5 Larval Trachea    578.5 Larval Carcass    379.675 Adult Head    1954.3 Adult Eye    470.125 Adult Brain    531.5 Adult Thoracic-Abdominal Ganglion    683.4 Adult Crop    5971.6 Adult Midgut    5606.8 Adult Hindgut    4751.4 Adult Malpighian Tubules    124.6 Adult Fat Body    5244.6 Adult Salivary Gland    178.6 Adult Heart    5752.5 Adult VirginFemale Spermatheca    2657.2 Adult InseminatedFemale Spermatheca    1690.3 Adult Ovary    10.2 Adult Testis    309.3 Adult Male Accessory Gland    1633.9 Adult Carcass    5520.5 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  715.525 Larval Midgut  (5379.3) Larval Hindgut  600.6 Larval Malpighian Tubules    68.8 Larval Fat Body  600.9 Larval Salivary Gland    41.5 Larval Trachea  578.5 Larval Carcass    379.675 Adult Head  (1954.3) Adult Eye    470.125 Adult Brain  531.5 Adult Thoracic-Abdominal Ganglion  683.4 Adult Crop  (5971.6) Adult Midgut  (5606.8) Adult Hindgut  (4751.4) Adult Malpighian Tubules    124.6 Adult Fat Body  (5244.6) Adult Salivary Gland    178.6 Adult Heart  (5752.5) Adult VirginFemale Spermatheca  (2657.2) Adult InseminatedFemale Spermatheca  (1690.3) Adult Ovary    10.2 Adult Testis    309.3 Adult Male Accessory Gland  (1633.9) Adult Carcass  (5520.5) Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    715.525 Larval Midgut  (5379.3) Larval Hindgut    600.6 Larval Malpighian Tubules    68.8 Larval Fat Body    600.9 Larval Salivary Gland    41.5 Larval Trachea    578.5 Larval Carcass    379.675 Adult Head  (1954.3) Adult Eye    470.125 Adult Brain    531.5 Adult Thoracic-Abdominal Ganglion    683.4 Adult Crop  (5971.6) Adult Midgut  (5606.8) Adult Hindgut  (4751.4) Adult Malpighian Tubules    124.6 Adult Fat Body  (5244.6) Adult Salivary Gland    178.6 Adult Heart  (5752.5) Adult VirginFemale Spermatheca  (2657.2) Adult InseminatedFemale Spermatheca  1690.3 Adult Ovary    10.2 Adult Testis    309.3 Adult Male Accessory Gland  1633.9 Adult Carcass  (5520.5) Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    715.525 Larval Midgut    5379.3 Larval Hindgut    600.6 Larval Malpighian Tubules    68.8 Larval Fat Body    600.9 Larval Salivary Gland    41.5 Larval Trachea    578.5 Larval Carcass    379.675 Adult Head    1954.3 Adult Eye    470.125 Adult Brain    531.5 Adult Thoracic-Abdominal Ganglion    683.4 Adult Crop    5971.6 Adult Midgut    5606.8 Adult Hindgut    4751.4 Adult Malpighian Tubules    124.6 Adult Fat Body    5244.6 Adult Salivary Gland    178.6 Adult Heart    5752.5 Adult VirginFemale Spermatheca    2657.2 Adult InseminatedFemale Spermatheca    1690.3 Adult Ovary    10.2 Adult Testis    309.3 Adult Male Accessory Gland    1633.9 Adult Carcass    5520.5 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    1954.3   NA  Eye    470.125   NA  Brain    531.5   715.525  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    683.4   NA  Crop    5971.6   5379.3  Midgut    5606.8   600.6  Hindgut    4751.4   68.8  Malpighian Tubules    124.6   600.9  Fat Body    5244.6   41.5  Salivary Gland    178.6   NA  Heart    5752.5   578.5  Trachea    NA   NA  VirginFemale Spermatheca    2657.2   NA  InseminatedFemale Spermatheca    1690.3   NA  Ovary    no informative data   NA  Testis    309.3   NA  Male Accessory Gland    1633.9   379.675  Carcass    5520.5 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    28 central nervous system, larvae L3    7 central nervous system, pupae P8    3 head, virgin 1-day female    31 head, virgin 4-day female    29 head, virgin 20-day female    30 head, mated 1-day female    29 head, mated 4-day female    20 head, mated 20-day female    39 head, mated 1-day male    34 head, mated 4-day male    44 head, mated 20-day male    52 salivary gland, larvae L3 wandering    3 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    32 digestive system, 1-day adult    280 digestive system, 4-day adult    172 digestive system, 20-day adult    119 fat body, larvae L3 wandering    25 fat body, white prepupae    2 fat body, pupae P8    0 carcass, larvae L3 wandering    3 carcass, 1-day adult    122 carcass, 4-day adult    98 carcass, 20-day adult    126 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    34 accessory gland, mated 4-day male    44 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (28) central nervous system, larvae L3    7 central nervous system, pupae P8    3 head, virgin 1-day female  (31) head, virgin 4-day female  (29) head, virgin 20-day female  (30) head, mated 1-day female  (29) head, mated 4-day female    20 head, mated 20-day female  (39) head, mated 1-day male  (34) head, mated 4-day male  (44) head, mated 20-day male  (52) salivary gland, larvae L3 wandering    3 salivary gland, white prepupae    3 digestive system, larvae L3 wandering  (32) digestive system, 1-day adult  (280) digestive system, 4-day adult  (172) digestive system, 20-day adult  (119) fat body, larvae L3 wandering    25 fat body, white prepupae    2 fat body, pupae P8    0 carcass, larvae L3 wandering    3 carcass, 1-day adult  (122) carcass, 4-day adult  (98) carcass, 20-day adult  (126) ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male  (34) accessory gland, mated 4-day male  (44) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    28 central nervous system, larvae L3    7 central nervous system, pupae P8    3 head, virgin 1-day female    31 head, virgin 4-day female    29 head, virgin 20-day female    30 head, mated 1-day female    29 head, mated 4-day female    20 head, mated 20-day female    39 head, mated 1-day male    34 head, mated 4-day male    44 head, mated 20-day male    52 salivary gland, larvae L3 wandering    3 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    32 digestive system, 1-day adult  (280) digestive system, 4-day adult  (172) digestive system, 20-day adult  (119) fat body, larvae L3 wandering    25 fat body, white prepupae    2 fat body, pupae P8    0 carcass, larvae L3 wandering    3 carcass, 1-day adult  (122) carcass, 4-day adult    98 carcass, 20-day adult  (126) ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    34 accessory gland, mated 4-day male    44 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    28 central nervous system, larvae L3    7 central nervous system, pupae P8    3 head, virgin 1-day female    31 head, virgin 4-day female    29 head, virgin 20-day female    30 head, mated 1-day female    29 head, mated 4-day female    20 head, mated 20-day female    39 head, mated 1-day male    34 head, mated 4-day male    44 head, mated 20-day male    52 salivary gland, larvae L3 wandering    3 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    32 digestive system, 1-day adult    280 digestive system, 4-day adult    172 digestive system, 20-day adult    119 fat body, larvae L3 wandering    25 fat body, white prepupae    2 fat body, pupae P8    0 carcass, larvae L3 wandering    3 carcass, 1-day adult    122 carcass, 4-day adult    98 carcass, 20-day adult    126 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    34 accessory gland, mated 4-day male    44 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    28 central nervous system, larvae L3    7 central nervous system, pupae P8    3 head, virgin 1-day female    31 head, virgin 4-day female    29 head, virgin 20-day female    30 head, mated 1-day female    29 head, mated 4-day female    20 head, mated 20-day female    39 head, mated 1-day male    34 head, mated 4-day male    44 head, mated 20-day male    52 salivary gland, larvae L3 wandering    3 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    32 digestive system, 1-day adult    280 digestive system, 4-day adult    172 digestive system, 20-day adult    119 fat body, larvae L3 wandering    25 fat body, white prepupae    2 fat body, pupae P8    0 carcass, larvae L3 wandering    3 carcass, 1-day adult    122 carcass, 4-day adult    98 carcass, 20-day adult    126 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    34 accessory gland, mated 4-day male    44 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  28 central nervous system, larvae L3    7 central nervous system, pupae P8    3 head, virgin 1-day female  31 head, virgin 4-day female  29 head, virgin 20-day female  30 head, mated 1-day female  29 head, mated 4-day female    20 head, mated 20-day female  (39) head, mated 1-day male  (34) head, mated 4-day male  (44) head, mated 20-day male  (52) salivary gland, larvae L3 wandering    3 salivary gland, white prepupae    3 digestive system, larvae L3 wandering  32 digestive system, 1-day adult  (280) digestive system, 4-day adult  (172) digestive system, 20-day adult  (119) fat body, larvae L3 wandering    25 fat body, white prepupae    2 fat body, pupae P8    0 carcass, larvae L3 wandering    3 carcass, 1-day adult  (122) carcass, 4-day adult  (98) carcass, 20-day adult  (126) ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male  (34) accessory gland, mated 4-day male  (44) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    28 central nervous system, larvae L3    7 central nervous system, pupae P8    3 head, virgin 1-day female    31 head, virgin 4-day female    29 head, virgin 20-day female    30 head, mated 1-day female    29 head, mated 4-day female    20 head, mated 20-day female    39 head, mated 1-day male    34 head, mated 4-day male    44 head, mated 20-day male    52 salivary gland, larvae L3 wandering    3 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    32 digestive system, 1-day adult  (280) digestive system, 4-day adult  (172) digestive system, 20-day adult  119 fat body, larvae L3 wandering    25 fat body, white prepupae    2 fat body, pupae P8    0 carcass, larvae L3 wandering    3 carcass, 1-day adult  122 carcass, 4-day adult    98 carcass, 20-day adult  126 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    34 accessory gland, mated 4-day male    44 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    28 central nervous system, larvae L3    7 central nervous system, pupae P8    3 head, virgin 1-day female    31 head, virgin 4-day female    29 head, virgin 20-day female    30 head, mated 1-day female    29 head, mated 4-day female    20 head, mated 20-day female    39 head, mated 1-day male    34 head, mated 4-day male    44 head, mated 20-day male    52 salivary gland, larvae L3 wandering    3 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    32 digestive system, 1-day adult    280 digestive system, 4-day adult    172 digestive system, 20-day adult    119 fat body, larvae L3 wandering    25 fat body, white prepupae    2 fat body, pupae P8    0 carcass, larvae L3 wandering    3 carcass, 1-day adult    122 carcass, 4-day adult    98 carcass, 20-day adult    126 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    34 accessory gland, mated 4-day male    44 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of very low expression. Peak expression observed within 12-24 hour embryonic stages, at stages throughout the larval period, during late pupal stages, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    1 embryo 06-08hr    7 embryo 08-10hr    18 embryo 10-12hr    32 embryo 12-14hr    22 embryo 14-16hr    71 embryo 16-18hr    169 embryo 18-20hr    408 embryo 20-22hr    732 embryo 22-24hr    730 larva L1    388 larva L2    546 larva L3 12hr old    555 larva L3 puffstage 1-2    221 larva L3 puffstage 3-6    47 larva L3 puffstage 7-9    17 white prepupae new    28 white prepupae 12hr    26 white prepupae 24hr    11 pupae 2d postWPP    21 pupae 3d postWPP    65 pupae 4d postWPP    196 adult male 01day    642 adult male 05day    649 adult male 30day    544 adult female 01day    269 adult female 05day    148 adult female 30day    181 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    1 embryo 06-08hr    7 embryo 08-10hr    18 embryo 10-12hr  (32) embryo 12-14hr    22 embryo 14-16hr  (71) embryo 16-18hr  (169) embryo 18-20hr  (408) embryo 20-22hr  (732) embryo 22-24hr  (730) larva L1  (388) larva L2  (546) larva L3 12hr old  (555) larva L3 puffstage 1-2  (221) larva L3 puffstage 3-6  (47) larva L3 puffstage 7-9    17 white prepupae new  (28) white prepupae 12hr  26 white prepupae 24hr    11 pupae 2d postWPP    21 pupae 3d postWPP  (65) pupae 4d postWPP  (196) adult male 01day  (642) adult male 05day  (649) adult male 30day  (544) adult female 01day  (269) adult female 05day  (148) adult female 30day  (181) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    1 embryo 06-08hr    7 embryo 08-10hr    18 embryo 10-12hr    32 embryo 12-14hr    22 embryo 14-16hr    71 embryo 16-18hr  (169) embryo 18-20hr  (408) embryo 20-22hr  (732) embryo 22-24hr  (730) larva L1  (388) larva L2  (546) larva L3 12hr old  (555) larva L3 puffstage 1-2  (221) larva L3 puffstage 3-6    47 larva L3 puffstage 7-9    17 white prepupae new    28 white prepupae 12hr    26 white prepupae 24hr    11 pupae 2d postWPP    21 pupae 3d postWPP    65 pupae 4d postWPP  (196) adult male 01day  (642) adult male 05day  (649) adult male 30day  (544) adult female 01day  (269) adult female 05day  (148) adult female 30day  (181) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    1 embryo 06-08hr    7 embryo 08-10hr    18 embryo 10-12hr    32 embryo 12-14hr    22 embryo 14-16hr    71 embryo 16-18hr    169 embryo 18-20hr    408 embryo 20-22hr    732 embryo 22-24hr    730 larva L1    388 larva L2    546 larva L3 12hr old    555 larva L3 puffstage 1-2    221 larva L3 puffstage 3-6    47 larva L3 puffstage 7-9    17 white prepupae new    28 white prepupae 12hr    26 white prepupae 24hr    11 pupae 2d postWPP    21 pupae 3d postWPP    65 pupae 4d postWPP    196 adult male 01day    642 adult male 05day    649 adult male 30day    544 adult female 01day    269 adult female 05day    148 adult female 30day    181 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    1 embryo 06-08hr    7 embryo 08-10hr    18 embryo 10-12hr    32 embryo 12-14hr    22 embryo 14-16hr    71 embryo 16-18hr    169 embryo 18-20hr    408 embryo 20-22hr    732 embryo 22-24hr    730 larva L1    388 larva L2    546 larva L3 12hr old    555 larva L3 puffstage 1-2    221 larva L3 puffstage 3-6    47 larva L3 puffstage 7-9    17 white prepupae new    28 white prepupae 12hr    26 white prepupae 24hr    11 pupae 2d postWPP    21 pupae 3d postWPP    65 pupae 4d postWPP    196 adult male 01day    642 adult male 05day    649 adult male 30day    544 adult female 01day    269 adult female 05day    148 adult female 30day    181 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    1 embryo 06-08hr    7 embryo 08-10hr    18 embryo 10-12hr  32 embryo 12-14hr    22 embryo 14-16hr  (71) embryo 16-18hr  (169) embryo 18-20hr  (408) embryo 20-22hr  (732) embryo 22-24hr  (730) larva L1  (388) larva L2  (546) larva L3 12hr old  (555) larva L3 puffstage 1-2  (221) larva L3 puffstage 3-6  (47) larva L3 puffstage 7-9    17 white prepupae new  28 white prepupae 12hr  26 white prepupae 24hr    11 pupae 2d postWPP    21 pupae 3d postWPP  (65) pupae 4d postWPP  (196) adult male 01day  (642) adult male 05day  (649) adult male 30day  (544) adult female 01day  (269) adult female 05day  (148) adult female 30day  (181) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    1 embryo 06-08hr    7 embryo 08-10hr    18 embryo 10-12hr    32 embryo 12-14hr    22 embryo 14-16hr    71 embryo 16-18hr  (169) embryo 18-20hr  (408) embryo 20-22hr  (732) embryo 22-24hr  (730) larva L1  (388) larva L2  (546) larva L3 12hr old  (555) larva L3 puffstage 1-2  (221) larva L3 puffstage 3-6    47 larva L3 puffstage 7-9    17 white prepupae new    28 white prepupae 12hr    26 white prepupae 24hr    11 pupae 2d postWPP    21 pupae 3d postWPP    65 pupae 4d postWPP  (196) adult male 01day  (642) adult male 05day  (649) adult male 30day  (544) adult female 01day  (269) adult female 05day  (148) adult female 30day  (181) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    1 embryo 06-08hr    7 embryo 08-10hr    18 embryo 10-12hr    32 embryo 12-14hr    22 embryo 14-16hr    71 embryo 16-18hr    169 embryo 18-20hr    408 embryo 20-22hr    732 embryo 22-24hr    730 larva L1    388 larva L2    546 larva L3 12hr old    555 larva L3 puffstage 1-2    221 larva L3 puffstage 3-6    47 larva L3 puffstage 7-9    17 white prepupae new    28 white prepupae 12hr    26 white prepupae 24hr    11 pupae 2d postWPP    21 pupae 3d postWPP    65 pupae 4d postWPP    196 adult male 01day    642 adult male 05day    649 adult male 30day    544 adult female 01day    269 adult female 05day    148 adult female 30day    181 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    1 embryonic 1182-4H    0 embryonic GM2    7 embryonic Kc167    0 embryonic S1    1 embryonic S3    2 leg disc CME L1    3 wing disc CME-W2    2 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    1 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    2 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    1 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    3 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    1 embryonic 1182-4H    0 embryonic GM2    7 embryonic Kc167    0 embryonic S1    1 embryonic S3    2 leg disc CME L1    3 wing disc CME-W2    2 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    1 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    2 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    1 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    1 embryonic 1182-4H    0 embryonic GM2    7 embryonic Kc167    0 embryonic S1    1 embryonic S3    2 leg disc CME L1    3 wing disc CME-W2    2 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    1 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    2 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    1 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    1 embryonic 1182-4H    0 embryonic GM2    7 embryonic Kc167    0 embryonic S1    1 embryonic S3    2 leg disc CME L1    3 wing disc CME-W2    2 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    1 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    2 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    1 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    3 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    1 embryonic 1182-4H    0 embryonic GM2    7 embryonic Kc167    0 embryonic S1    1 embryonic S3    2 leg disc CME L1    3 wing disc CME-W2    2 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    1 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    2 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    1 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    3 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    1 embryonic 1182-4H    0 embryonic GM2    7 embryonic Kc167    0 embryonic S1    1 embryonic S3    2 leg disc CME L1    3 wing disc CME-W2    2 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    1 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    2 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    1 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    1 embryonic 1182-4H    0 embryonic GM2    7 embryonic Kc167    0 embryonic S1    1 embryonic S3    2 leg disc CME L1    3 wing disc CME-W2    2 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    1 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    2 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    1 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    1 embryonic 1182-4H    0 embryonic GM2    7 embryonic Kc167    0 embryonic S1    1 embryonic S3    2 leg disc CME L1    3 wing disc CME-W2    2 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    1 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    2 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    1 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    12 heat shock, 4-day adult    111 Cadmium 50 mM 6 hrs, larvae L3    177 Cadmium 50 mM 12 hrs, larvae L3    65 Cadmium 50 mM 48 hrs, 4-day adult    126 Cadmium 100 mM 48 hrs, 4-day adult    12 Copper 0.5 mM 12 hrs, larvae L3    152 Copper 15 mM 48 hrs, 4-day adult    6 Zinc 5 mM 12 hrs, larvae L3    76 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    32 Ethanol 5% 3 hrs, larvae L3    132 Ethanol 10% 3 hrs, larvae L3    131 Caffeine 1.5 mg/ml 4 hrs, larvae L3    63 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    41 Paraquat 10 mM 48 hrs, 4-day adult    54 Rotenone 2 μg 12 hrs, larvae L3    105 Rotenone 8 μg 12 hrs, larvae L3    192 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    12 heat shock, 4-day adult  (111) Cadmium 50 mM 6 hrs, larvae L3  (177) Cadmium 50 mM 12 hrs, larvae L3  (65) Cadmium 50 mM 48 hrs, 4-day adult  (126) Cadmium 100 mM 48 hrs, 4-day adult    12 Copper 0.5 mM 12 hrs, larvae L3  (152) Copper 15 mM 48 hrs, 4-day adult    6 Zinc 5 mM 12 hrs, larvae L3  (76) Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3  (32) Ethanol 5% 3 hrs, larvae L3  (132) Ethanol 10% 3 hrs, larvae L3  (131) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (63) Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult  (41) Paraquat 10 mM 48 hrs, 4-day adult  (54) Rotenone 2 μg 12 hrs, larvae L3  (105) Rotenone 8 μg 12 hrs, larvae L3  (192) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    12 heat shock, 4-day adult  (111) Cadmium 50 mM 6 hrs, larvae L3  (177) Cadmium 50 mM 12 hrs, larvae L3    65 Cadmium 50 mM 48 hrs, 4-day adult  (126) Cadmium 100 mM 48 hrs, 4-day adult    12 Copper 0.5 mM 12 hrs, larvae L3  (152) Copper 15 mM 48 hrs, 4-day adult    6 Zinc 5 mM 12 hrs, larvae L3    76 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    32 Ethanol 5% 3 hrs, larvae L3  (132) Ethanol 10% 3 hrs, larvae L3  (131) Caffeine 1.5 mg/ml 4 hrs, larvae L3    63 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    41 Paraquat 10 mM 48 hrs, 4-day adult    54 Rotenone 2 μg 12 hrs, larvae L3  105 Rotenone 8 μg 12 hrs, larvae L3  (192) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    12 heat shock, 4-day adult    111 Cadmium 50 mM 6 hrs, larvae L3    177 Cadmium 50 mM 12 hrs, larvae L3    65 Cadmium 50 mM 48 hrs, 4-day adult    126 Cadmium 100 mM 48 hrs, 4-day adult    12 Copper 0.5 mM 12 hrs, larvae L3    152 Copper 15 mM 48 hrs, 4-day adult    6 Zinc 5 mM 12 hrs, larvae L3    76 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    32 Ethanol 5% 3 hrs, larvae L3    132 Ethanol 10% 3 hrs, larvae L3    131 Caffeine 1.5 mg/ml 4 hrs, larvae L3    63 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    41 Paraquat 10 mM 48 hrs, 4-day adult    54 Rotenone 2 μg 12 hrs, larvae L3    105 Rotenone 8 μg 12 hrs, larvae L3    192 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    12 heat shock, 4-day adult    111 Cadmium 50 mM 6 hrs, larvae L3    177 Cadmium 50 mM 12 hrs, larvae L3    65 Cadmium 50 mM 48 hrs, 4-day adult    126 Cadmium 100 mM 48 hrs, 4-day adult    12 Copper 0.5 mM 12 hrs, larvae L3    152 Copper 15 mM 48 hrs, 4-day adult    6 Zinc 5 mM 12 hrs, larvae L3    76 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    32 Ethanol 5% 3 hrs, larvae L3    132 Ethanol 10% 3 hrs, larvae L3    131 Caffeine 1.5 mg/ml 4 hrs, larvae L3    63 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    41 Paraquat 10 mM 48 hrs, 4-day adult    54 Rotenone 2 μg 12 hrs, larvae L3    105 Rotenone 8 μg 12 hrs, larvae L3    192 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    12 heat shock, 4-day adult  (111) Cadmium 50 mM 6 hrs, larvae L3  (177) Cadmium 50 mM 12 hrs, larvae L3  (65) Cadmium 50 mM 48 hrs, 4-day adult  (126) Cadmium 100 mM 48 hrs, 4-day adult    12 Copper 0.5 mM 12 hrs, larvae L3  (152) Copper 15 mM 48 hrs, 4-day adult    6 Zinc 5 mM 12 hrs, larvae L3  (76) Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3  32 Ethanol 5% 3 hrs, larvae L3  (132) Ethanol 10% 3 hrs, larvae L3  (131) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (63) Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult  (41) Paraquat 10 mM 48 hrs, 4-day adult  (54) Rotenone 2 μg 12 hrs, larvae L3  (105) Rotenone 8 μg 12 hrs, larvae L3  (192) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    12 heat shock, 4-day adult  111 Cadmium 50 mM 6 hrs, larvae L3  (177) Cadmium 50 mM 12 hrs, larvae L3    65 Cadmium 50 mM 48 hrs, 4-day adult  126 Cadmium 100 mM 48 hrs, 4-day adult    12 Copper 0.5 mM 12 hrs, larvae L3  (152) Copper 15 mM 48 hrs, 4-day adult    6 Zinc 5 mM 12 hrs, larvae L3    76 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    32 Ethanol 5% 3 hrs, larvae L3  132 Ethanol 10% 3 hrs, larvae L3  131 Caffeine 1.5 mg/ml 4 hrs, larvae L3    63 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    41 Paraquat 10 mM 48 hrs, 4-day adult    54 Rotenone 2 μg 12 hrs, larvae L3  105 Rotenone 8 μg 12 hrs, larvae L3  (192) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    12 heat shock, 4-day adult    111 Cadmium 50 mM 6 hrs, larvae L3    177 Cadmium 50 mM 12 hrs, larvae L3    65 Cadmium 50 mM 48 hrs, 4-day adult    126 Cadmium 100 mM 48 hrs, 4-day adult    12 Copper 0.5 mM 12 hrs, larvae L3    152 Copper 15 mM 48 hrs, 4-day adult    6 Zinc 5 mM 12 hrs, larvae L3    76 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    32 Ethanol 5% 3 hrs, larvae L3    132 Ethanol 10% 3 hrs, larvae L3    131 Caffeine 1.5 mg/ml 4 hrs, larvae L3    63 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    41 Paraquat 10 mM 48 hrs, 4-day adult    54 Rotenone 2 μg 12 hrs, larvae L3    105 Rotenone 8 μg 12 hrs, larvae L3    192 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_20 mE1_20_mRNA_expression_cluster_15
External Data & Images
Linkouts	BDGP expression data • RH39533 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0010387 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG8627-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for Dbi Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 DbiGD13725 Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of Dbi Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Dbi Class Mutagen Stocks Known lesion DbiGD13725 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes
Aneuploid Aberrations
Disrupted in	Df(3L)Exel6110 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD13725} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{SUPor-P}KG02766 NA
Gene Ontology: Function, Process & Cellular Component ( 4 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 4 terms )
Molecular Function
CV term Evidence References
diazepam binding inferred from sequence or structural similarity with UniProtKB:P45882 (FlyBase, 1992-) enzyme inhibitor activity inferred from sequence or structural similarity with UniProtKB:P45882 (FlyBase, 1992-) fatty-acyl-CoA binding inferred from sequence or structural similarity (Kolmer et al., 1994) inferred from sequence or structural similarity with Saccharomyces ACB1 (FlyBase, 1992-) non-traceable author statement (Swiss-Prot Project Members, 1995.6.1) traceable author statement (Kolmer, 2000.5.1)
Biological Process
CV term Evidence References
cellular acyl-CoA homeostasis inferred from sequence or structural similarity (Kolmer et al., 1994) inferred from sequence or structural similarity with Saccharomyces ACB1 (FlyBase, 1992-) non-traceable author statement (Wadum et al., 2002)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Dbi allele Gene References
External Data
Linkouts	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0010387 DroID - A comprehensive database of gene and protein interactions. • FBgn0010387 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 38784
Orthologs
OrthoDB Orthologs (59) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6R24FN Dipteran inclusive ortholog search EOG6XPQRJ Insect inclusive ortholog search EOG68679H Arthropod inclusive ortholog search EOG64B8K8 Metazoa inclusive ortholog search EOG63NM8M
Orthologs in Drosophila Species (EOG6R24FN)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\Dbi     Drosophila simulans   Dsim\GD13995 Y   Drosophila sechellia   Dsec\GM14822 Y   Drosophila erecta   Dere\GG14406 Y   Drosophila yakuba   Dyak\GE21596 Y   Drosophila ananassae   Dana\GF25011 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA21218 Y   Drosophila persimilis   Dper\GL25029 Y   Drosophila willistoni   Dwil\GK16653 Y   Drosophila virilis   Dvir\GJ12061 Y   Drosophila mojavensis   Dmoj\GI13295 Y   Drosophila grimshawi   Dgri\GH14518 Y
Orthologs in non-Drosophila Dipterans (EOG6XPQRJ)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL009214   Anopheles gambiae Malaria mosquito  Agam\AGAP007460   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ011388
Orthologs in non-Dipteran Insects (EOG68679H)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\LOC411272 Y Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG012109 Y Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH15148 Y Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH10297 Y Atta cephalotes Leafcutter ant  Acep\ACEP20895 Y Atta cephalotes Leafcutter ant  Acep\ACEP16530 Y Camponotus floridanus Florida carpenter ant  Cflo\CFLO11629 Y Camponotus floridanus Florida carpenter ant  Cflo\CFLO16195 Y Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL23669 Y Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL13048 Y Linepithema humile Argentine ant  Lhum\LH26219 Y Linepithema humile Argentine ant  Lhum\LH22017 Y Pogonomyrmex barbatus Red harvester ant  Pbar\PB15548 Y Solenopsis invicta Red fire ant  Sinv\SINV11895 Y Acyrthosiphon pisum Pea aphid  Apim\ACYPI001471 Y Acyrthosiphon pisum Pea aphid  Apim\ACYPI003355 Y Bombyx mori Silkmoth  Bmor\BGIBMGA002906 Y Pediculus humanus Human body louse  Phum\PHUM568220 Y Pediculus humanus Human body louse  Phum\PHUM568230 Y Tribolium castaneum Red flour beetle  Tcas\TC012627 Y
Orthologs in non-Insect Arthropods (EOG64B8K8)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\azu Y Daphnia pulex Water flea  Dpux\act Y Daphnia pulex Water flea  Dpux\Plek2 Y Daphnia pulex Water flea  Dpux\psbM Y Daphnia pulex Water flea  Dpux\JGI_V11_308882 Y Daphnia pulex Water flea  Dpux\Igsf9 Y Daphnia pulex Water flea  Dpux\COI Y Ixodes scapularis Deer tick  Isca\ISCW002731 Y
Orthologs in non-Arthropod Metazoa (EOG63NM8M)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\acbp-1 Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_012636gn Y Danio rerio Zebrafish  Drer\acbd7 Y Danio rerio Zebrafish  Drer\zgc:77734 Y Xenopus tropicalis Western clawed frog  Xtro\acbd7 Y Gallus gallus Domestic chicken  Ggal\ACBD7 Y Gallus gallus Domestic chicken  Ggal\DBI Y Mus musculus House mouse  Mmus\Dbil5 Y Mus musculus House mouse  Mmus\Acbd7 Y Mus musculus House mouse  Mmus\Dbi Y Rattus norvegicus Norway rat  Rnor\Dbi Y Rattus norvegicus Norway rat  Rnor\Dbil5 Y Rattus norvegicus Norway rat  Rnor\LOC301444 Y Rattus norvegicus Norway rat  Rnor\Acbd7 Y Homo sapiens Human  Hsap\DBI Y Homo sapiens Human  Hsap\ACBD7 Y
Human Orthologs (2)
Gene OMIM HGNC Hsap\DBI     Hsap\ACBD7
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD13995 Drosophila sechellia Dsec\GM14822 Drosophila erecta Dere\GG14406 Drosophila yakuba Dyak\GE21596 Drosophila ananassae Dana\GF25011 Drosophila pseudoobscura pseudoobscura Dpse\GA21218 Drosophila persimilis Dper\GL25029 Drosophila willistoni Dwil\GK16653 Drosophila virilis Dvir\GJ12061 Drosophila mojavensis Dmoj\GI13295 Drosophila grimshawi Dgri\GH14518
Stocks & Reagents
Stocks Listed in FlyBase ( 2 )
VDRC	v23679 w1118; P{GD13725}v23679 v23680 w1118; P{GD13725}v23680
Genomic Clones ( 2 )
	BACR16I16 BACR21K18 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 28 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RH39533
Other clones	DPiM_RH39533
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH28001 RH54610
Other clones	53381 62117 81050 106611 214503.71 CK01.77D.F6 CK01.89D.G3 CK01.105A.H3 Dmel_dig_000461_0659_3706 Dmel_dig_009150_0706_0837 Dmel_neb_011393_0612_1115 EC14731 EC079566 EK171050 EK187424 EK232453 EP03929 FGH106E01 RP004211949 RP004264482 RP004385141 RP004416134 RP004446154 UUGC0979
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0010387 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 38784
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: Dbi anon-WO0172774.131 (FlyBase, 1996-) Source for merge of: Dbi BcDNA:RH39533 (FlyBase, 1996-)
Additional comments	Source for merge of Dbi anon-WO0172774.131 was sequence comparison (date:051113). (FlyBase, 1996-) Source for merge of Dbi BcDNA:RH39533 was a shared cDNA (date:030728). (FlyBase, 1996-)
Other Comments
	Isolated from a genomic library using a rat DBI cDNA as a probe, under low stringency conditions. (Kolmer et al., 1994) Dbi has been cloned and sequenced, and its expression pattern has been analysed. (Kolmer et al., 1994)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_079228 NM_168192 RefSeq (Proteins) • NP_523952 NP_729218 DDBJ / EMBL / GenBank • AAA21649 AAA21650 AAF50607 AAL48175 AAN12074 AX260169 AY070704 BI568148 CAA53268 U04822 U04823 X75596 Entrez Gene - A searchable database of RefSeq genes. • 38784 UniProtKB/Swiss-Prot • P42281
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Acyl-CoA-binding protein, ACBP (IPR000582) FERM/acyl-CoA-binding protein, 3-helical bundle (IPR014352) Acyl-CoA-binding protein, ACBP, conserved site (IPR022408) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • RH39533
Linkouts
	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0010387 DroID - A comprehensive database of gene and protein interactions. • FBgn0010387 DRSC - Results from RNAi screens. • FBgn0010387 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0010387 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG8627-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0010387 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 38784 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 38784 modMine - Data generated by the modENCODE project. • FBgn0010387
Synonyms & Secondary IDs ( 11 )
Reported As
Symbol Synonym	ACBP (Wadum et al., 2002, Kolmer, 2000.5.1) anon-WO0172774.131   BcDNA:RH39533   CG8627 (Kolmer, 2000.5.1, Cammarato et al., 2011) DBI (Kolmer, 2000.5.1, Roos, 1993.12.30, Roos, 1993.12.30, Roos et al., 1994, Kolmer et al., 1994) Dbi (Seugnet et al., 2009, Ladoukakis et al., 2011)
Name Synonym	acyl-CoA binding protein (Kolmer, 2000.5.1) diazepam binding inhibitor (Hetru, 1993.11.3) Diazepam-binding inhibitor (Cammarato et al., 2011) diazepam-binding protein (Kolmer, 2000.5.1) endozepine (Kolmer, 2000.5.1)
Secondary FlyBase IDs
	FBgn0046463 FBgn0047016
References ( 28 )
Generate a list of	All references relating to this gene ( 28 )
List References by type	Research paper  ( 7 ) Supplementary material  ( 4 ) Personal communication to FlyBase  ( 5 ) Abstract  ( 2 ) FlyBase analysis  ( 2 ) DNA/RNA sequence record  ( 3 ) Protein sequence record  ( 1 ) Website  ( 1 ) Patent  ( 1 ) Curated genome annotation  ( 2 )
Recent research papers ( 1 )
	Ladoukakis et al., 2011, Genome Biol. 12(11): R118 Hundreds of putatively functional small open reading frames in Drosophila. [FBrf0218190] Show all research papers ...