General Information Symbol Dmel\ DroSpecies D. melanogaster Name Drosocin Annotation symbol CG10816 Feature type protein_coding_gene FlyBase ID FBgn0010388 Gene Model Status Current Stock availability 2 publicly
available Also Known As Drc, drosocin, Dros Genomic Location Chromosome (arm) 2R Recombination map 2- Cytogenetic map 51C1-51C1 Sequence location 2R:10,633,466..10,634,219 [+]
Genomic Maps
Summary Information Automatically generated summary
See sections below for more information The gene
Drosocin is referred to in FlyBase by the symbol
Dmel\Dro (CG10816, FBgn0010388). It is a protein_coding_gene from
Drosophila melanogaster . Its
molecular function is unknown. There is experimental evidence that it is involved in the
biological process : defense response to Gram-positive bacterium; defense response to Gram-negative bacterium; defense response; antibacterial humoral response.
5 alleles are reported . No phenotypic data is available. It has
2 annotated transcripts and
2 annotated polypeptides . Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of no expression detected. Peak expression observed at stages throughout the pupal period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. Comments on Affy2 ProbeSet: ProbeSet 1631697_at partially aligns to an exonic region of the only FlyBase-annotated transcript isoform of Dro: 6 out of 14 probes fall into this exonic region. Gene sequence location is
2R:10633466..10634219 .
User Contributed Data
Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release.
It currently only tracks new links between this FlyBase report and other
FlyBase data classes (e.g. genes, references, stocks) or controlled
vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your
feed reader .
FB2013_03
FB2013_02
All updates
Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Experimentally Determined Cytological Location
51C1-51C6
(determined by in situ hybridisation)
Experimentally Determined Recombination Data
Location Left of (cM) Right of (cM) Notes Gene Model & Products Comments on Gene
Model Gene model reviewed during 5.40
Gene model reviewed during 5.50
Transcript Data Annotated Transcripts Additional Transcript Data
& Comments Reported size (kB) Comments External Data Crossreferences
Polypeptide Data Annotated
Polypeptides Additional Polypeptide
Data & Comments Reported size (kDa) Comments External Data Linkouts Crossreferences Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank UniProtKB/Swiss-Prot UniProtKB/TrEMBL Mapped Features Mapped Features have been reorganized, please
see this article for details. Additional mapped features and mutations can
be found on GBrowse or related reports. External Data Linkouts Crossreferences Expression Data Transcript Expression
Additional Descriptive Data
Marker for Subcellular Localization CV Term Polypeptide Expression
Additional Descriptive Data
Marker for Subcellular Localization (GO Cellular Component) inferred from direct assay
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference
FlyAtlas Anatomy Microarray
Linear, scaled to maximum expression level
Tissue
Expression Level
Larval Central Nervous System
4.175
Larval Midgut
2
Larval Hindgut
11.7
Larval Malpighian Tubules
3.1
Larval Fat Body
38.3
Larval Salivary Gland
8
Larval Trachea
16.425
Larval Carcass
16.225
Adult Head
48
Adult Eye
74.425
Adult Brain
13.6
Adult Thoracic-Abdominal Ganglion
9.3
Adult Crop
6.4
Adult Midgut
5.8
Adult Hindgut
13.4
Adult Malpighian Tubules
10.7
Adult Fat Body
33.3
Adult Salivary Gland
11.5
Adult Heart
5.5
Adult VirginFemale Spermatheca
40.7
Adult InseminatedFemale Spermatheca
25.5
Adult Ovary
7.8
Adult Testis
1.3
Adult Male Accessory Gland
6.5
Adult Carcass
39.3
Expression Level Scale
None
Low
Linear, scaled to Moderate expression
Tissue
Expression Level
Larval Central Nervous System
4.175
Larval Midgut
2
Larval Hindgut
11.7
Larval Malpighian Tubules
3.1
Larval Fat Body
38.3
Larval Salivary Gland
8
Larval Trachea
16.425
Larval Carcass
16.225
Adult Head
48
Adult Eye
74.425
Adult Brain
13.6
Adult Thoracic-Abdominal Ganglion
9.3
Adult Crop
6.4
Adult Midgut
5.8
Adult Hindgut
13.4
Adult Malpighian Tubules
10.7
Adult Fat Body
33.3
Adult Salivary Gland
11.5
Adult Heart
5.5
Adult VirginFemale Spermatheca
40.7
Adult InseminatedFemale Spermatheca
25.5
Adult Ovary
7.8
Adult Testis
1.3
Adult Male Accessory Gland
6.5
Adult Carcass
39.3
Expression Level Scale
None
Low
Moderate
High
Linear, scaled to High level expression
Tissue
Expression Level
Larval Central Nervous System
4.175
Larval Midgut
2
Larval Hindgut
11.7
Larval Malpighian Tubules
3.1
Larval Fat Body
38.3
Larval Salivary Gland
8
Larval Trachea
16.425
Larval Carcass
16.225
Adult Head
48
Adult Eye
74.425
Adult Brain
13.6
Adult Thoracic-Abdominal Ganglion
9.3
Adult Crop
6.4
Adult Midgut
5.8
Adult Hindgut
13.4
Adult Malpighian Tubules
10.7
Adult Fat Body
33.3
Adult Salivary Gland
11.5
Adult Heart
5.5
Adult VirginFemale Spermatheca
40.7
Adult InseminatedFemale Spermatheca
25.5
Adult Ovary
7.8
Adult Testis
1.3
Adult Male Accessory Gland
6.5
Adult Carcass
39.3
Expression Level Scale
None
Low
Moderate
High
Very high
Linear, scaled to Very high expression
Tissue
Expression Level
Larval Central Nervous System
4.175
Larval Midgut
2
Larval Hindgut
11.7
Larval Malpighian Tubules
3.1
Larval Fat Body
38.3
Larval Salivary Gland
8
Larval Trachea
16.425
Larval Carcass
16.225
Adult Head
48
Adult Eye
74.425
Adult Brain
13.6
Adult Thoracic-Abdominal Ganglion
9.3
Adult Crop
6.4
Adult Midgut
5.8
Adult Hindgut
13.4
Adult Malpighian Tubules
10.7
Adult Fat Body
33.3
Adult Salivary Gland
11.5
Adult Heart
5.5
Adult VirginFemale Spermatheca
40.7
Adult InseminatedFemale Spermatheca
25.5
Adult Ovary
7.8
Adult Testis
1.3
Adult Male Accessory Gland
6.5
Adult Carcass
39.3
Expression Level Scale
Very high
log, scaled to maximum expression level
Tissue
Expression Level
Larval Central Nervous System
4.175
Larval Midgut
2
Larval Hindgut
11.7
Larval Malpighian Tubules
3.1
Larval Fat Body
38.3
Larval Salivary Gland
8
Larval Trachea
16.425
Larval Carcass
16.225
Adult Head
48
Adult Eye
74.425
Adult Brain
13.6
Adult Thoracic-Abdominal Ganglion
9.3
Adult Crop
6.4
Adult Midgut
5.8
Adult Hindgut
13.4
Adult Malpighian Tubules
10.7
Adult Fat Body
33.3
Adult Salivary Gland
11.5
Adult Heart
5.5
Adult VirginFemale Spermatheca
40.7
Adult InseminatedFemale Spermatheca
25.5
Adult Ovary
7.8
Adult Testis
1.3
Adult Male Accessory Gland
6.5
Adult Carcass
39.3
Expression Level Scale
None
Low
Moderate
log, scaled to Moderate expression
Tissue
Expression Level
Larval Central Nervous System
4.175
Larval Midgut
2
Larval Hindgut
11.7
Larval Malpighian Tubules
3.1
Larval Fat Body
38.3
Larval Salivary Gland
8
Larval Trachea
16.425
Larval Carcass
16.225
Adult Head
48
Adult Eye
74.425
Adult Brain
13.6
Adult Thoracic-Abdominal Ganglion
9.3
Adult Crop
6.4
Adult Midgut
5.8
Adult Hindgut
13.4
Adult Malpighian Tubules
10.7
Adult Fat Body
33.3
Adult Salivary Gland
11.5
Adult Heart
5.5
Adult VirginFemale Spermatheca
40.7
Adult InseminatedFemale Spermatheca
25.5
Adult Ovary
7.8
Adult Testis
1.3
Adult Male Accessory Gland
6.5
Adult Carcass
39.3
Expression Level Scale
None
Low
Moderate
High
log, scaled to High level expression
Tissue
Expression Level
Larval Central Nervous System
4.175
Larval Midgut
2
Larval Hindgut
11.7
Larval Malpighian Tubules
3.1
Larval Fat Body
38.3
Larval Salivary Gland
8
Larval Trachea
16.425
Larval Carcass
16.225
Adult Head
48
Adult Eye
74.425
Adult Brain
13.6
Adult Thoracic-Abdominal Ganglion
9.3
Adult Crop
6.4
Adult Midgut
5.8
Adult Hindgut
13.4
Adult Malpighian Tubules
10.7
Adult Fat Body
33.3
Adult Salivary Gland
11.5
Adult Heart
5.5
Adult VirginFemale Spermatheca
40.7
Adult InseminatedFemale Spermatheca
25.5
Adult Ovary
7.8
Adult Testis
1.3
Adult Male Accessory Gland
6.5
Adult Carcass
39.3
Expression Level Scale
None
Low
Moderate
High
Very high
log, scaled to Very high expression
Tissue
Expression Level
Larval Central Nervous System
4.175
Larval Midgut
2
Larval Hindgut
11.7
Larval Malpighian Tubules
3.1
Larval Fat Body
38.3
Larval Salivary Gland
8
Larval Trachea
16.425
Larval Carcass
16.225
Adult Head
48
Adult Eye
74.425
Adult Brain
13.6
Adult Thoracic-Abdominal Ganglion
9.3
Adult Crop
6.4
Adult Midgut
5.8
Adult Hindgut
13.4
Adult Malpighian Tubules
10.7
Adult Fat Body
33.3
Adult Salivary Gland
11.5
Adult Heart
5.5
Adult VirginFemale Spermatheca
40.7
Adult InseminatedFemale Spermatheca
25.5
Adult Ovary
7.8
Adult Testis
1.3
Adult Male Accessory Gland
6.5
Adult Carcass
39.3
Expression Level Scale
None
Low
Moderate
High
Very high
Heatmap
Tissue
Expression Level
Larval Central Nervous System
Larval Midgut
Larval Hindgut
Larval Malpighian Tubules
Larval Fat Body
Larval Salivary Gland
Larval Trachea
Larval Carcass
Adult Head
Adult Eye
Adult Brain
Adult Thoracic-Abdominal Ganglion
Adult Crop
Adult Midgut
Adult Hindgut
Adult Malpighian Tubules
Adult Fat Body
Adult Salivary Gland
Adult Heart
Adult VirginFemale Spermatheca
Adult InseminatedFemale Spermatheca
Adult Ovary
Adult Testis
Adult Male Accessory Gland
Adult Carcass
FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level
Tissue
Adult Expression Level
NA
Head
48
NA
Eye
74.425
NA
Brain
no informative data
4.175
Central Nervous System
NA
NA
Thoracic-Abdominal Ganglion
9.3
NA
Crop
6.4
2
Midgut
5.8
11.7
Hindgut
no informative data
3.1
Malpighian Tubules
no informative data
no informative data
Fat Body
no informative data
8
Salivary Gland
no informative data
NA
Heart
5.5
no informative data
Trachea
NA
NA
VirginFemale Spermatheca
40.7
NA
InseminatedFemale Spermatheca
25.5
NA
Ovary
7.8
NA
Testis
1.3
NA
Male Accessory Gland
6.5
no informative data
Carcass
no informative data
modENCODE Anatomy RNA-Seq
Linear, scaled to maximum expression level
Tissue
Expression Level
imaginal disc, larvae L3 wandering
2
central nervous system, larvae L3
1
central nervous system, pupae P8
1
head, virgin 1-day female
12
head, virgin 4-day female
129
head, virgin 20-day female
432
head, mated 1-day female
35
head, mated 4-day female
87
head, mated 20-day female
499
head, mated 1-day male
23
head, mated 4-day male
57
head, mated 20-day male
256
salivary gland, larvae L3 wandering
0
salivary gland, white prepupae
1
digestive system, larvae L3 wandering
1
digestive system, 1-day adult
22
digestive system, 4-day adult
4
digestive system, 20-day adult
56
fat body, larvae L3 wandering
57
fat body, white prepupae
10
fat body, pupae P8
46
carcass, larvae L3 wandering
7
carcass, 1-day adult
171
carcass, 4-day adult
120
carcass, 20-day adult
688
ovary, virgin 4-day female
4
ovary, mated 4-day female
3
testis, mated 4-day male
4
accessory gland, mated 4-day male
1
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Moderate expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
2
central nervous system, larvae L3
1
central nervous system, pupae P8
1
head, virgin 1-day female
12
head, virgin 4-day female
(129)
head, virgin 20-day female
(432)
head, mated 1-day female
(35)
head, mated 4-day female
(87)
head, mated 20-day female
(499)
head, mated 1-day male
23
head, mated 4-day male
(57)
head, mated 20-day male
(256)
salivary gland, larvae L3 wandering
0
salivary gland, white prepupae
1
digestive system, larvae L3 wandering
1
digestive system, 1-day adult
22
digestive system, 4-day adult
4
digestive system, 20-day adult
(56)
fat body, larvae L3 wandering
(57)
fat body, white prepupae
10
fat body, pupae P8
(46)
carcass, larvae L3 wandering
7
carcass, 1-day adult
(171)
carcass, 4-day adult
(120)
carcass, 20-day adult
(688)
ovary, virgin 4-day female
4
ovary, mated 4-day female
3
testis, mated 4-day male
4
accessory gland, mated 4-day male
1
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
2
central nervous system, larvae L3
1
central nervous system, pupae P8
1
head, virgin 1-day female
12
head, virgin 4-day female
(129)
head, virgin 20-day female
(432)
head, mated 1-day female
35
head, mated 4-day female
87
head, mated 20-day female
(499)
head, mated 1-day male
23
head, mated 4-day male
57
head, mated 20-day male
(256)
salivary gland, larvae L3 wandering
0
salivary gland, white prepupae
1
digestive system, larvae L3 wandering
1
digestive system, 1-day adult
22
digestive system, 4-day adult
4
digestive system, 20-day adult
56
fat body, larvae L3 wandering
57
fat body, white prepupae
10
fat body, pupae P8
46
carcass, larvae L3 wandering
7
carcass, 1-day adult
(171)
carcass, 4-day adult
(120)
carcass, 20-day adult
(688)
ovary, virgin 4-day female
4
ovary, mated 4-day female
3
testis, mated 4-day male
4
accessory gland, mated 4-day male
1
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
2
central nervous system, larvae L3
1
central nervous system, pupae P8
1
head, virgin 1-day female
12
head, virgin 4-day female
129
head, virgin 20-day female
432
head, mated 1-day female
35
head, mated 4-day female
87
head, mated 20-day female
499
head, mated 1-day male
23
head, mated 4-day male
57
head, mated 20-day male
256
salivary gland, larvae L3 wandering
0
salivary gland, white prepupae
1
digestive system, larvae L3 wandering
1
digestive system, 1-day adult
22
digestive system, 4-day adult
4
digestive system, 20-day adult
56
fat body, larvae L3 wandering
57
fat body, white prepupae
10
fat body, pupae P8
46
carcass, larvae L3 wandering
7
carcass, 1-day adult
171
carcass, 4-day adult
120
carcass, 20-day adult
688
ovary, virgin 4-day female
4
ovary, mated 4-day female
3
testis, mated 4-day male
4
accessory gland, mated 4-day male
1
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Tissue
Expression Level
imaginal disc, larvae L3 wandering
2
central nervous system, larvae L3
1
central nervous system, pupae P8
1
head, virgin 1-day female
12
head, virgin 4-day female
129
head, virgin 20-day female
432
head, mated 1-day female
35
head, mated 4-day female
87
head, mated 20-day female
499
head, mated 1-day male
23
head, mated 4-day male
57
head, mated 20-day male
256
salivary gland, larvae L3 wandering
0
salivary gland, white prepupae
1
digestive system, larvae L3 wandering
1
digestive system, 1-day adult
22
digestive system, 4-day adult
4
digestive system, 20-day adult
56
fat body, larvae L3 wandering
57
fat body, white prepupae
10
fat body, pupae P8
46
carcass, larvae L3 wandering
7
carcass, 1-day adult
171
carcass, 4-day adult
120
carcass, 20-day adult
688
ovary, virgin 4-day female
4
ovary, mated 4-day female
3
testis, mated 4-day male
4
accessory gland, mated 4-day male
1
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
log, scaled to Moderate expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
2
central nervous system, larvae L3
1
central nervous system, pupae P8
1
head, virgin 1-day female
12
head, virgin 4-day female
(129)
head, virgin 20-day female
(432)
head, mated 1-day female
(35)
head, mated 4-day female
(87)
head, mated 20-day female
(499)
head, mated 1-day male
23
head, mated 4-day male
(57)
head, mated 20-day male
(256)
salivary gland, larvae L3 wandering
0
salivary gland, white prepupae
1
digestive system, larvae L3 wandering
1
digestive system, 1-day adult
22
digestive system, 4-day adult
4
digestive system, 20-day adult
(56)
fat body, larvae L3 wandering
(57)
fat body, white prepupae
10
fat body, pupae P8
(46)
carcass, larvae L3 wandering
7
carcass, 1-day adult
(171)
carcass, 4-day adult
(120)
carcass, 20-day adult
(688)
ovary, virgin 4-day female
4
ovary, mated 4-day female
3
testis, mated 4-day male
4
accessory gland, mated 4-day male
1
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
2
central nervous system, larvae L3
1
central nervous system, pupae P8
1
head, virgin 1-day female
12
head, virgin 4-day female
129
head, virgin 20-day female
(432)
head, mated 1-day female
35
head, mated 4-day female
87
head, mated 20-day female
(499)
head, mated 1-day male
23
head, mated 4-day male
57
head, mated 20-day male
(256)
salivary gland, larvae L3 wandering
0
salivary gland, white prepupae
1
digestive system, larvae L3 wandering
1
digestive system, 1-day adult
22
digestive system, 4-day adult
4
digestive system, 20-day adult
56
fat body, larvae L3 wandering
57
fat body, white prepupae
10
fat body, pupae P8
46
carcass, larvae L3 wandering
7
carcass, 1-day adult
(171)
carcass, 4-day adult
120
carcass, 20-day adult
(688)
ovary, virgin 4-day female
4
ovary, mated 4-day female
3
testis, mated 4-day male
4
accessory gland, mated 4-day male
1
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
2
central nervous system, larvae L3
1
central nervous system, pupae P8
1
head, virgin 1-day female
12
head, virgin 4-day female
129
head, virgin 20-day female
432
head, mated 1-day female
35
head, mated 4-day female
87
head, mated 20-day female
499
head, mated 1-day male
23
head, mated 4-day male
57
head, mated 20-day male
256
salivary gland, larvae L3 wandering
0
salivary gland, white prepupae
1
digestive system, larvae L3 wandering
1
digestive system, 1-day adult
22
digestive system, 4-day adult
4
digestive system, 20-day adult
56
fat body, larvae L3 wandering
57
fat body, white prepupae
10
fat body, pupae P8
46
carcass, larvae L3 wandering
7
carcass, 1-day adult
171
carcass, 4-day adult
120
carcass, 20-day adult
688
ovary, virgin 4-day female
4
ovary, mated 4-day female
3
testis, mated 4-day male
4
accessory gland, mated 4-day male
1
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Tissue
Expression Level
imaginal disc, larvae L3 wandering
central nervous system, larvae L3
central nervous system, pupae P8
head, virgin 1-day female
head, virgin 4-day female
head, virgin 20-day female
head, mated 1-day female
head, mated 4-day female
head, mated 20-day female
head, mated 1-day male
head, mated 4-day male
head, mated 20-day male
salivary gland, larvae L3 wandering
salivary gland, white prepupae
digestive system, larvae L3 wandering
digestive system, 1-day adult
digestive system, 4-day adult
digestive system, 20-day adult
fat body, larvae L3 wandering
fat body, white prepupae
fat body, pupae P8
carcass, larvae L3 wandering
carcass, 1-day adult
carcass, 4-day adult
carcass, 20-day adult
ovary, virgin 4-day female
ovary, mated 4-day female
testis, mated 4-day male
accessory gland, mated 4-day male
modENCODE Development RNA-Seq
Linear, scaled to maximum expression level
Developmental Stage
Expression Level
embryo 00-02hr
0
embryo 02-04hr
0
embryo 04-06hr
0
embryo 06-08hr
0
embryo 08-10hr
0
embryo 10-12hr
0
embryo 12-14hr
0
embryo 14-16hr
0
embryo 16-18hr
0
embryo 18-20hr
0
embryo 20-22hr
0
embryo 22-24hr
0
larva L1
2
larva L2
1
larva L3 12hr old
7
larva L3 puffstage 1-2
27
larva L3 puffstage 3-6
60
larva L3 puffstage 7-9
36
white prepupae new
45
white prepupae 12hr
127
white prepupae 24hr
84
pupae 2d postWPP
67
pupae 3d postWPP
21
pupae 4d postWPP
58
adult male 01day
33
adult male 05day
24
adult male 30day
127
adult female 01day
236
adult female 05day
99
adult female 30day
323
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Moderate expression
Developmental Stage
Expression Level
embryo 00-02hr
0
embryo 02-04hr
0
embryo 04-06hr
0
embryo 06-08hr
0
embryo 08-10hr
0
embryo 10-12hr
0
embryo 12-14hr
0
embryo 14-16hr
0
embryo 16-18hr
0
embryo 18-20hr
0
embryo 20-22hr
0
embryo 22-24hr
0
larva L1
2
larva L2
1
larva L3 12hr old
7
larva L3 puffstage 1-2
(27)
larva L3 puffstage 3-6
(60)
larva L3 puffstage 7-9
(36)
white prepupae new
(45)
white prepupae 12hr
(127)
white prepupae 24hr
(84)
pupae 2d postWPP
(67)
pupae 3d postWPP
21
pupae 4d postWPP
(58)
adult male 01day
(33)
adult male 05day
24
adult male 30day
(127)
adult female 01day
(236)
adult female 05day
(99)
adult female 30day
(323)
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Developmental Stage
Expression Level
embryo 00-02hr
0
embryo 02-04hr
0
embryo 04-06hr
0
embryo 06-08hr
0
embryo 08-10hr
0
embryo 10-12hr
0
embryo 12-14hr
0
embryo 14-16hr
0
embryo 16-18hr
0
embryo 18-20hr
0
embryo 20-22hr
0
embryo 22-24hr
0
larva L1
2
larva L2
1
larva L3 12hr old
7
larva L3 puffstage 1-2
27
larva L3 puffstage 3-6
60
larva L3 puffstage 7-9
36
white prepupae new
45
white prepupae 12hr
(127)
white prepupae 24hr
84
pupae 2d postWPP
67
pupae 3d postWPP
21
pupae 4d postWPP
58
adult male 01day
33
adult male 05day
24
adult male 30day
(127)
adult female 01day
(236)
adult female 05day
99
adult female 30day
(323)
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Developmental Stage
Expression Level
embryo 00-02hr
0
embryo 02-04hr
0
embryo 04-06hr
0
embryo 06-08hr
0
embryo 08-10hr
0
embryo 10-12hr
0
embryo 12-14hr
0
embryo 14-16hr
0
embryo 16-18hr
0
embryo 18-20hr
0
embryo 20-22hr
0
embryo 22-24hr
0
larva L1
2
larva L2
1
larva L3 12hr old
7
larva L3 puffstage 1-2
27
larva L3 puffstage 3-6
60
larva L3 puffstage 7-9
36
white prepupae new
45
white prepupae 12hr
127
white prepupae 24hr
84
pupae 2d postWPP
67
pupae 3d postWPP
21
pupae 4d postWPP
58
adult male 01day
33
adult male 05day
24
adult male 30day
127
adult female 01day
236
adult female 05day
99
adult female 30day
323
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Developmental Stage
Expression Level
embryo 00-02hr
0
embryo 02-04hr
0
embryo 04-06hr
0
embryo 06-08hr
0
embryo 08-10hr
0
embryo 10-12hr
0
embryo 12-14hr
0
embryo 14-16hr
0
embryo 16-18hr
0
embryo 18-20hr
0
embryo 20-22hr
0
embryo 22-24hr
0
larva L1
2
larva L2
1
larva L3 12hr old
7
larva L3 puffstage 1-2
27
larva L3 puffstage 3-6
60
larva L3 puffstage 7-9
36
white prepupae new
45
white prepupae 12hr
127
white prepupae 24hr
84
pupae 2d postWPP
67
pupae 3d postWPP
21
pupae 4d postWPP
58
adult male 01day
33
adult male 05day
24
adult male 30day
127
adult female 01day
236
adult female 05day
99
adult female 30day
323
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Moderate expression
Developmental Stage
Expression Level
embryo 00-02hr
0
embryo 02-04hr
0
embryo 04-06hr
0
embryo 06-08hr
0
embryo 08-10hr
0
embryo 10-12hr
0
embryo 12-14hr
0
embryo 14-16hr
0
embryo 16-18hr
0
embryo 18-20hr
0
embryo 20-22hr
0
embryo 22-24hr
0
larva L1
2
larva L2
1
larva L3 12hr old
7
larva L3 puffstage 1-2
27
larva L3 puffstage 3-6
(60)
larva L3 puffstage 7-9
(36)
white prepupae new
(45)
white prepupae 12hr
(127)
white prepupae 24hr
(84)
pupae 2d postWPP
(67)
pupae 3d postWPP
21
pupae 4d postWPP
(58)
adult male 01day
(33)
adult male 05day
24
adult male 30day
(127)
adult female 01day
(236)
adult female 05day
(99)
adult female 30day
(323)
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Developmental Stage
Expression Level
embryo 00-02hr
0
embryo 02-04hr
0
embryo 04-06hr
0
embryo 06-08hr
0
embryo 08-10hr
0
embryo 10-12hr
0
embryo 12-14hr
0
embryo 14-16hr
0
embryo 16-18hr
0
embryo 18-20hr
0
embryo 20-22hr
0
embryo 22-24hr
0
larva L1
2
larva L2
1
larva L3 12hr old
7
larva L3 puffstage 1-2
27
larva L3 puffstage 3-6
60
larva L3 puffstage 7-9
36
white prepupae new
45
white prepupae 12hr
127
white prepupae 24hr
84
pupae 2d postWPP
67
pupae 3d postWPP
21
pupae 4d postWPP
58
adult male 01day
33
adult male 05day
24
adult male 30day
127
adult female 01day
(236)
adult female 05day
99
adult female 30day
(323)
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Developmental Stage
Expression Level
embryo 00-02hr
0
embryo 02-04hr
0
embryo 04-06hr
0
embryo 06-08hr
0
embryo 08-10hr
0
embryo 10-12hr
0
embryo 12-14hr
0
embryo 14-16hr
0
embryo 16-18hr
0
embryo 18-20hr
0
embryo 20-22hr
0
embryo 22-24hr
0
larva L1
2
larva L2
1
larva L3 12hr old
7
larva L3 puffstage 1-2
27
larva L3 puffstage 3-6
60
larva L3 puffstage 7-9
36
white prepupae new
45
white prepupae 12hr
127
white prepupae 24hr
84
pupae 2d postWPP
67
pupae 3d postWPP
21
pupae 4d postWPP
58
adult male 01day
33
adult male 05day
24
adult male 30day
127
adult female 01day
236
adult female 05day
99
adult female 30day
323
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Developmental Stage
Expression Level
embryo 00-02hr
embryo 02-04hr
embryo 04-06hr
embryo 06-08hr
embryo 08-10hr
embryo 10-12hr
embryo 12-14hr
embryo 14-16hr
embryo 16-18hr
embryo 18-20hr
embryo 20-22hr
embryo 22-24hr
larva L1
larva L2
larva L3 12hr old
larva L3 puffstage 1-2
larva L3 puffstage 3-6
larva L3 puffstage 7-9
white prepupae new
white prepupae 12hr
white prepupae 24hr
pupae 2d postWPP
pupae 3d postWPP
pupae 4d postWPP
adult male 01day
adult male 05day
adult male 30day
adult female 01day
adult female 05day
adult female 30day
modENCODE Cell Lines RNA-Seq
Linear, scaled to maximum expression level
Cell Line
Expression Level
Schneider line 2 S2R+
0
Schneider line 2 Sg4
3
embryonic 1182-4H
1
embryonic GM2
0
embryonic Kc167
0
embryonic S1
397
embryonic S3
0
leg disc CME L1
6
wing disc CME-W2
22
wing disc ML-DmD8
1
wing disc ML-DmD9
1
wing disc ML-DmD16-c3
3
wing disc ML-DmD21
0
wing disc ML-DmD32
1
haltere disc ML-DmD17-c3
0
eye-antennal disc ML-DmD11
0
antennal disc ML-DmD20-c5
27
mixed discs ML-DmD4-c1
0
CNS ML-DmBG1-c1
186
CNS ML-DmBG2-c2
27
tumorous blood cells mbn2
1
ovary fGS/OSS
0
ovary OSC
0
ovary OSS
0
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Moderate expression
Cell Line
Expression Level
Schneider line 2 S2R+
0
Schneider line 2 Sg4
3
embryonic 1182-4H
1
embryonic GM2
0
embryonic Kc167
0
embryonic S1
(397)
embryonic S3
0
leg disc CME L1
6
wing disc CME-W2
22
wing disc ML-DmD8
1
wing disc ML-DmD9
1
wing disc ML-DmD16-c3
3
wing disc ML-DmD21
0
wing disc ML-DmD32
1
haltere disc ML-DmD17-c3
0
eye-antennal disc ML-DmD11
0
antennal disc ML-DmD20-c5
(27)
mixed discs ML-DmD4-c1
0
CNS ML-DmBG1-c1
(186)
CNS ML-DmBG2-c2
(27)
tumorous blood cells mbn2
1
ovary fGS/OSS
0
ovary OSC
0
ovary OSS
0
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Cell Line
Expression Level
Schneider line 2 S2R+
0
Schneider line 2 Sg4
3
embryonic 1182-4H
1
embryonic GM2
0
embryonic Kc167
0
embryonic S1
(397)
embryonic S3
0
leg disc CME L1
6
wing disc CME-W2
22
wing disc ML-DmD8
1
wing disc ML-DmD9
1
wing disc ML-DmD16-c3
3
wing disc ML-DmD21
0
wing disc ML-DmD32
1
haltere disc ML-DmD17-c3
0
eye-antennal disc ML-DmD11
0
antennal disc ML-DmD20-c5
27
mixed discs ML-DmD4-c1
0
CNS ML-DmBG1-c1
(186)
CNS ML-DmBG2-c2
27
tumorous blood cells mbn2
1
ovary fGS/OSS
0
ovary OSC
0
ovary OSS
0
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Cell Line
Expression Level
Schneider line 2 S2R+
0
Schneider line 2 Sg4
3
embryonic 1182-4H
1
embryonic GM2
0
embryonic Kc167
0
embryonic S1
397
embryonic S3
0
leg disc CME L1
6
wing disc CME-W2
22
wing disc ML-DmD8
1
wing disc ML-DmD9
1
wing disc ML-DmD16-c3
3
wing disc ML-DmD21
0
wing disc ML-DmD32
1
haltere disc ML-DmD17-c3
0
eye-antennal disc ML-DmD11
0
antennal disc ML-DmD20-c5
27
mixed discs ML-DmD4-c1
0
CNS ML-DmBG1-c1
186
CNS ML-DmBG2-c2
27
tumorous blood cells mbn2
1
ovary fGS/OSS
0
ovary OSC
0
ovary OSS
0
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Cell Line
Expression Level
Schneider line 2 S2R+
0
Schneider line 2 Sg4
3
embryonic 1182-4H
1
embryonic GM2
0
embryonic Kc167
0
embryonic S1
397
embryonic S3
0
leg disc CME L1
6
wing disc CME-W2
22
wing disc ML-DmD8
1
wing disc ML-DmD9
1
wing disc ML-DmD16-c3
3
wing disc ML-DmD21
0
wing disc ML-DmD32
1
haltere disc ML-DmD17-c3
0
eye-antennal disc ML-DmD11
0
antennal disc ML-DmD20-c5
27
mixed discs ML-DmD4-c1
0
CNS ML-DmBG1-c1
186
CNS ML-DmBG2-c2
27
tumorous blood cells mbn2
1
ovary fGS/OSS
0
ovary OSC
0
ovary OSS
0
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Moderate expression
Cell Line
Expression Level
Schneider line 2 S2R+
0
Schneider line 2 Sg4
3
embryonic 1182-4H
1
embryonic GM2
0
embryonic Kc167
0
embryonic S1
(397)
embryonic S3
0
leg disc CME L1
6
wing disc CME-W2
22
wing disc ML-DmD8
1
wing disc ML-DmD9
1
wing disc ML-DmD16-c3
3
wing disc ML-DmD21
0
wing disc ML-DmD32
1
haltere disc ML-DmD17-c3
0
eye-antennal disc ML-DmD11
0
antennal disc ML-DmD20-c5
27
mixed discs ML-DmD4-c1
0
CNS ML-DmBG1-c1
(186)
CNS ML-DmBG2-c2
27
tumorous blood cells mbn2
1
ovary fGS/OSS
0
ovary OSC
0
ovary OSS
0
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Cell Line
Expression Level
Schneider line 2 S2R+
0
Schneider line 2 Sg4
3
embryonic 1182-4H
1
embryonic GM2
0
embryonic Kc167
0
embryonic S1
(397)
embryonic S3
0
leg disc CME L1
6
wing disc CME-W2
22
wing disc ML-DmD8
1
wing disc ML-DmD9
1
wing disc ML-DmD16-c3
3
wing disc ML-DmD21
0
wing disc ML-DmD32
1
haltere disc ML-DmD17-c3
0
eye-antennal disc ML-DmD11
0
antennal disc ML-DmD20-c5
27
mixed discs ML-DmD4-c1
0
CNS ML-DmBG1-c1
(186)
CNS ML-DmBG2-c2
27
tumorous blood cells mbn2
1
ovary fGS/OSS
0
ovary OSC
0
ovary OSS
0
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Cell Line
Expression Level
Schneider line 2 S2R+
0
Schneider line 2 Sg4
3
embryonic 1182-4H
1
embryonic GM2
0
embryonic Kc167
0
embryonic S1
397
embryonic S3
0
leg disc CME L1
6
wing disc CME-W2
22
wing disc ML-DmD8
1
wing disc ML-DmD9
1
wing disc ML-DmD16-c3
3
wing disc ML-DmD21
0
wing disc ML-DmD32
1
haltere disc ML-DmD17-c3
0
eye-antennal disc ML-DmD11
0
antennal disc ML-DmD20-c5
27
mixed discs ML-DmD4-c1
0
CNS ML-DmBG1-c1
186
CNS ML-DmBG2-c2
27
tumorous blood cells mbn2
1
ovary fGS/OSS
0
ovary OSC
0
ovary OSS
0
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Cell Line
Expression Level
Schneider line 2 S2R+
Schneider line 2 Sg4
embryonic 1182-4H
embryonic GM2
embryonic Kc167
embryonic S1
embryonic S3
leg disc CME L1
wing disc CME-W2
wing disc ML-DmD8
wing disc ML-DmD9
wing disc ML-DmD16-c3
wing disc ML-DmD21
wing disc ML-DmD32
haltere disc ML-DmD17-c3
eye-antennal disc ML-DmD11
antennal disc ML-DmD20-c5
mixed discs ML-DmD4-c1
CNS ML-DmBG1-c1
CNS ML-DmBG2-c2
tumorous blood cells mbn2
ovary fGS/OSS
ovary OSC
ovary OSS
modENCODE Treatments RNA-Seq
Linear, scaled to maximum expression level
Treatment
Expression Level
extended cold, 4-day adult
52
cold shock, 4-day adult
10
heat shock, 4-day adult
16
Cadmium 50 mM 6 hrs, larvae L3
64
Cadmium 50 mM 12 hrs, larvae L3
4
Cadmium 50 mM 48 hrs, 4-day adult
6
Cadmium 100 mM 48 hrs, 4-day adult
14
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
60
Zinc 5 mM 12 hrs, larvae L3
5
Zinc 4.5 mM 48 hrs, 4-day adult
86
Ethanol 2.5% 3 hrs, larvae L3
70
Ethanol 5% 3 hrs, larvae L3
45
Ethanol 10% 3 hrs, larvae L3
108
Caffeine 1.5 mg/ml 4 hrs, larvae L3
50
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
3
Caffeine 25 mg/ml 48 hrs, 4-day adult
26
Paraquat 5 mM 48 hrs, 4-day adult
5
Paraquat 10 mM 48 hrs, 4-day adult
6
Rotenone 2 μg 12 hrs, larvae L3
82
Rotenone 8 μg 12 hrs, larvae L3
41
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Moderate expression
Treatment
Expression Level
extended cold, 4-day adult
(52)
cold shock, 4-day adult
10
heat shock, 4-day adult
16
Cadmium 50 mM 6 hrs, larvae L3
(64)
Cadmium 50 mM 12 hrs, larvae L3
4
Cadmium 50 mM 48 hrs, 4-day adult
6
Cadmium 100 mM 48 hrs, 4-day adult
14
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
(60)
Zinc 5 mM 12 hrs, larvae L3
5
Zinc 4.5 mM 48 hrs, 4-day adult
(86)
Ethanol 2.5% 3 hrs, larvae L3
(70)
Ethanol 5% 3 hrs, larvae L3
(45)
Ethanol 10% 3 hrs, larvae L3
(108)
Caffeine 1.5 mg/ml 4 hrs, larvae L3
(50)
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
3
Caffeine 25 mg/ml 48 hrs, 4-day adult
26
Paraquat 5 mM 48 hrs, 4-day adult
5
Paraquat 10 mM 48 hrs, 4-day adult
6
Rotenone 2 μg 12 hrs, larvae L3
(82)
Rotenone 8 μg 12 hrs, larvae L3
(41)
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Treatment
Expression Level
extended cold, 4-day adult
52
cold shock, 4-day adult
10
heat shock, 4-day adult
16
Cadmium 50 mM 6 hrs, larvae L3
64
Cadmium 50 mM 12 hrs, larvae L3
4
Cadmium 50 mM 48 hrs, 4-day adult
6
Cadmium 100 mM 48 hrs, 4-day adult
14
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
60
Zinc 5 mM 12 hrs, larvae L3
5
Zinc 4.5 mM 48 hrs, 4-day adult
86
Ethanol 2.5% 3 hrs, larvae L3
70
Ethanol 5% 3 hrs, larvae L3
45
Ethanol 10% 3 hrs, larvae L3
(108)
Caffeine 1.5 mg/ml 4 hrs, larvae L3
50
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
3
Caffeine 25 mg/ml 48 hrs, 4-day adult
26
Paraquat 5 mM 48 hrs, 4-day adult
5
Paraquat 10 mM 48 hrs, 4-day adult
6
Rotenone 2 μg 12 hrs, larvae L3
82
Rotenone 8 μg 12 hrs, larvae L3
41
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Treatment
Expression Level
extended cold, 4-day adult
52
cold shock, 4-day adult
10
heat shock, 4-day adult
16
Cadmium 50 mM 6 hrs, larvae L3
64
Cadmium 50 mM 12 hrs, larvae L3
4
Cadmium 50 mM 48 hrs, 4-day adult
6
Cadmium 100 mM 48 hrs, 4-day adult
14
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
60
Zinc 5 mM 12 hrs, larvae L3
5
Zinc 4.5 mM 48 hrs, 4-day adult
86
Ethanol 2.5% 3 hrs, larvae L3
70
Ethanol 5% 3 hrs, larvae L3
45
Ethanol 10% 3 hrs, larvae L3
108
Caffeine 1.5 mg/ml 4 hrs, larvae L3
50
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
3
Caffeine 25 mg/ml 48 hrs, 4-day adult
26
Paraquat 5 mM 48 hrs, 4-day adult
5
Paraquat 10 mM 48 hrs, 4-day adult
6
Rotenone 2 μg 12 hrs, larvae L3
82
Rotenone 8 μg 12 hrs, larvae L3
41
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Treatment
Expression Level
extended cold, 4-day adult
52
cold shock, 4-day adult
10
heat shock, 4-day adult
16
Cadmium 50 mM 6 hrs, larvae L3
64
Cadmium 50 mM 12 hrs, larvae L3
4
Cadmium 50 mM 48 hrs, 4-day adult
6
Cadmium 100 mM 48 hrs, 4-day adult
14
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
60
Zinc 5 mM 12 hrs, larvae L3
5
Zinc 4.5 mM 48 hrs, 4-day adult
86
Ethanol 2.5% 3 hrs, larvae L3
70
Ethanol 5% 3 hrs, larvae L3
45
Ethanol 10% 3 hrs, larvae L3
108
Caffeine 1.5 mg/ml 4 hrs, larvae L3
50
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
3
Caffeine 25 mg/ml 48 hrs, 4-day adult
26
Paraquat 5 mM 48 hrs, 4-day adult
5
Paraquat 10 mM 48 hrs, 4-day adult
6
Rotenone 2 μg 12 hrs, larvae L3
82
Rotenone 8 μg 12 hrs, larvae L3
41
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Moderate expression
Treatment
Expression Level
extended cold, 4-day adult
(52)
cold shock, 4-day adult
10
heat shock, 4-day adult
16
Cadmium 50 mM 6 hrs, larvae L3
(64)
Cadmium 50 mM 12 hrs, larvae L3
4
Cadmium 50 mM 48 hrs, 4-day adult
6
Cadmium 100 mM 48 hrs, 4-day adult
14
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
(60)
Zinc 5 mM 12 hrs, larvae L3
5
Zinc 4.5 mM 48 hrs, 4-day adult
(86)
Ethanol 2.5% 3 hrs, larvae L3
(70)
Ethanol 5% 3 hrs, larvae L3
(45)
Ethanol 10% 3 hrs, larvae L3
(108)
Caffeine 1.5 mg/ml 4 hrs, larvae L3
(50)
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
3
Caffeine 25 mg/ml 48 hrs, 4-day adult
26
Paraquat 5 mM 48 hrs, 4-day adult
5
Paraquat 10 mM 48 hrs, 4-day adult
6
Rotenone 2 μg 12 hrs, larvae L3
(82)
Rotenone 8 μg 12 hrs, larvae L3
(41)
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Treatment
Expression Level
extended cold, 4-day adult
52
cold shock, 4-day adult
10
heat shock, 4-day adult
16
Cadmium 50 mM 6 hrs, larvae L3
64
Cadmium 50 mM 12 hrs, larvae L3
4
Cadmium 50 mM 48 hrs, 4-day adult
6
Cadmium 100 mM 48 hrs, 4-day adult
14
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
60
Zinc 5 mM 12 hrs, larvae L3
5
Zinc 4.5 mM 48 hrs, 4-day adult
86
Ethanol 2.5% 3 hrs, larvae L3
70
Ethanol 5% 3 hrs, larvae L3
45
Ethanol 10% 3 hrs, larvae L3
108
Caffeine 1.5 mg/ml 4 hrs, larvae L3
50
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
3
Caffeine 25 mg/ml 48 hrs, 4-day adult
26
Paraquat 5 mM 48 hrs, 4-day adult
5
Paraquat 10 mM 48 hrs, 4-day adult
6
Rotenone 2 μg 12 hrs, larvae L3
82
Rotenone 8 μg 12 hrs, larvae L3
41
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Treatment
Expression Level
extended cold, 4-day adult
52
cold shock, 4-day adult
10
heat shock, 4-day adult
16
Cadmium 50 mM 6 hrs, larvae L3
64
Cadmium 50 mM 12 hrs, larvae L3
4
Cadmium 50 mM 48 hrs, 4-day adult
6
Cadmium 100 mM 48 hrs, 4-day adult
14
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
60
Zinc 5 mM 12 hrs, larvae L3
5
Zinc 4.5 mM 48 hrs, 4-day adult
86
Ethanol 2.5% 3 hrs, larvae L3
70
Ethanol 5% 3 hrs, larvae L3
45
Ethanol 10% 3 hrs, larvae L3
108
Caffeine 1.5 mg/ml 4 hrs, larvae L3
50
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
3
Caffeine 25 mg/ml 48 hrs, 4-day adult
26
Paraquat 5 mM 48 hrs, 4-day adult
5
Paraquat 10 mM 48 hrs, 4-day adult
6
Rotenone 2 μg 12 hrs, larvae L3
82
Rotenone 8 μg 12 hrs, larvae L3
41
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Treatment
Expression Level
extended cold, 4-day adult
cold shock, 4-day adult
heat shock, 4-day adult
Cadmium 50 mM 6 hrs, larvae L3
Cadmium 50 mM 12 hrs, larvae L3
Cadmium 50 mM 48 hrs, 4-day adult
Cadmium 100 mM 48 hrs, 4-day adult
Copper 0.5 mM 12 hrs, larvae L3
Copper 15 mM 48 hrs, 4-day adult
Zinc 5 mM 12 hrs, larvae L3
Zinc 4.5 mM 48 hrs, 4-day adult
Ethanol 2.5% 3 hrs, larvae L3
Ethanol 5% 3 hrs, larvae L3
Ethanol 10% 3 hrs, larvae L3
Caffeine 1.5 mg/ml 4 hrs, larvae L3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
Caffeine 25 mg/ml 48 hrs, 4-day adult
Paraquat 5 mM 48 hrs, 4-day adult
Paraquat 10 mM 48 hrs, 4-day adult
Rotenone 2 μg 12 hrs, larvae L3
Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
External Data & Images
Linkouts
- Cell culture data for RNAi and other high-throughput technologies
- Adult expression by tissue, using Affymetrix Dros2 array
Alleles & Phenotypes Summary of Allele Phenotypes Classical Alleles ( 0 ) For All Classical Alleles Show Allele of
Dro Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs
( 5 ) For All Alleles Carried on Transgenic
Constructs Show Aneuploid Aberrations Disrupted in Transgenic Constructs & Insertions
Transgenic Constructs characterization construct
Insertions Gene Ontology: Function, Process
& Cellular Component ( 6 unique terms ) Terms Based on
Experimental Evidence ( 5 terms ) Molecular Function ( 0 terms) Biological Process inferred from expression pattern
inferred from direct assay
inferred from direct assay
inferred from expression pattern
inferred from direct assay
Cellular Component inferred from direct assay
Terms Based on Predictions or
Assertions ( 2 terms ) Molecular Function ( 0 terms) Biological Process non-traceable author statement
traceable author statement
non-traceable author statement
traceable author statement
Cellular Component ( 0 terms) Sequence Ontology: Class of Gene Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions Interacts with Please look at the allele data
for full details of the genetic interactions
External Data Linkouts
- A comprehensive database of gene and protein interactions.
Orthologs
OrthoDB Orthologs (9)
- based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
OrthoDB orthology group searches
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
No orthologs identified
Insect inclusive ortholog search
No orthologs identified
Arthropod inclusive ortholog search
No orthologs identified
Metazoa inclusive ortholog search
No orthologs identified
Orthologs in Drosophila Species
(EOG69PBKB )
Drosophila melanogaster
fruit fly
Drosophila pseudoobscura pseudoobscura
Y
Orthologs in non-Drosophila Dipterans (None identified)
No non-Drosophilid orthologies identified
Orthologs in non-Dipteran Insects (None identified)
No non-Dipteran orthologies identified
Orthologs in non-Insect Arthropods (None identified)
No non-Insect Arthropod orthologies identified
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)AAA Orthologs (8)
based on analysis using Dmel annotation version 4.3
Drosophila pseudoobscura pseudoobscura
Stocks & Reagents Stocks Listed in FlyBase ( 2 )VDRC Genomic Clones ( 2 )Please Note FlyBase no
longer curates genomic clone accessions so this list
may not be complete
cDNA Clones ( 12 )Please Note This section lists
cDNAs and ESTs that fall within the genomic extent
of the gene model, which may include cDNAs and ESTs
of genes within introns, or of overlapping genes.
Please see
GBrowse for alignment of the cDNAs and ESTs
to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones Other clones cDNA Clones, End Sequenced
(ESTs) BDGP DGC clones Other clones RNAi & Array Information Linkouts
- Results from RNAi screens.
- GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
Antibody Information
Other Information Discoverer Etymology Identification Relationship to Other Genes Source for database identity of Source for database merge of Source for merge of: Dro BcDNA:RH31634
Source for merge of: Dro IM15
Additional comments Source for merge of Dro BcDNA:RH31634 was a shared cDNA (date:030728).
Other Comments Identified as a gene with significant level of mRNA cycling as assessed by expression analysis using high density oligonucleotide arrays with probe generated from adult heads harvested over six time points over the course of a day. Shows alteration in expression in a
Clk mutant background.
Identification: Encodes a protein that is induced by immune challenge.
Ecol\lacZDpt.PR adults are pricked with a sterile needle dipped in culture pellets of various living microorganisms (distinct bacterial strains, fungal spores or hyphae). Pricking results in a low but clearly detectable expression of all antimicrobial genes and these genes are induced above the background level by specific classes of microorganism.
Glycopeptides of
Dro are isolated and the range of activities of these molecules is studied.
Cloning and characterisation of
Dro . 2.5kb of upstream sequence confers inducibility and tissue specificity to a transgene.
Genes encoding antibacterial peptides are regulated in a manner distinct from that of
Drs , encoding the antifungal peptide.
Transcription is not strongly induced by hymenopteran parasitoids.
Dro encodes a 19-residue proline-rich inducible antibacterial peptide, which has an O-glycosylation that is necessary for its full biological activity.
External Crossreferences & Linkouts
Sequence Crossreferences
- A searchable database of RefSeq genes.
Other Crossreferences
- Patterns of gene expression in Drosophila embryogenesis
Linkouts
- A comprehensive database of gene and protein interactions.
- Results from RNAi screens.
- Cell culture data for RNAi and other high-throughput technologies
- Adult expression by tissue, using Affymetrix Dros2 array
- Integrated genomics database for Drosophila, Anopheles, and C.elegans
- GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
- Data generated by the modENCODE project.
Synonyms & Secondary IDs
( 23 )Reported As Symbol Synonym CG10816
(
Irving et al., 2001 ,
De Gregorio et al., 2001 ,
Valanne et al., 2007 ,
Gendrin et al., 2009 ,
Keleman et al., 2009.8.5 ,
Hernandez-Romano et al., 2008 ,
Tsai et al., 2008 )
Drc
(
Apidianakis et al., 2005 ,
Tzou et al., 2002 ,
Boulanger et al., 2001 ,
Lemaitre et al., 1997 ,
Lemaitre et al., 1996 ,
Charlet et al., 1996 ,
Wang et al., 2012 )
Dro
(
Sackton and Clark, 2009 ,
Ramos et al., 2006 ,
Chen et al., 2010 ,
Tsuzuki et al., 2012 ,
Leulier et al., 2006 ,
Bergeret et al., 2008 ,
Tauszig-Delamasure et al., 2002 ,
Becker et al., 2010 ,
Clark et al., 2011 ,
Radyuk et al., 2010 ,
Domanitskaya et al., 2007 ,
Broderick et al., 2012 ,
Jiang et al., 2010 ,
Marcu et al., 2011 ,
Vanha-Aho et al., 2012 ,
Kalajdzic et al., 2012 ,
An et al., 2012 ,
Ladoukakis et al., 2011 )
drosocin
(
Leclerc and Reichhart, 2004 ,
Lemaitre, 2000.12.20 ,
Meister, 1996.6.11 ,
Hetru, 1993.3.9 ,
Uttenweiler-Joseph et al., 1998 ,
Bulet et al., 1993 )
Name Synonym drosocin
(
Okado et al., 2009 ,
Anbutsu and Fukatsu, 2010 ,
Moule et al., 2010 ,
Wagner et al., 2009 ,
Hallem et al., 2007 ,
Lee and Edery, 2008 ,
Bhattacharya and Steward, 2002 ,
Ligoxygakis et al., 2002 ,
Kapelnikov et al., 2008 ,
Stergiopoulos et al., 2009 ,
Zsindely et al., 2009 ,
Domanitskaya et al., 2007 ,
Ahn et al., 2011 ,
Wang et al., 2012 ,
Lemaitre et al., 2012 )
Drosocin
(
Sackton and Clark, 2009 ,
Tzou et al., 2002 ,
Charlet et al., 1996 ,
Pal et al., 2007 ,
Waterhouse et al., 2007 ,
Rutschmann et al., 2000 ,
Leulier et al., 2006 ,
Gendrin et al., 2009 ,
Akhouayri et al., 2011 ,
Ragab et al., 2011 ,
Bergeret et al., 2008 ,
Tang et al., 2008 ,
Kim et al., 2007 ,
McGraw et al., 2008 ,
Wu et al., 2007 ,
Lai et al., 2007 ,
Flatt et al., 2008 ,
Luo et al., 2001 ,
Ayres and Schneider, 2009 ,
Carpenter et al., 2009 ,
Helenius et al., 2009 ,
Costa et al., 2009 ,
Tauszig-Delamasure et al., 2002 ,
Beckstead et al., 2005 ,
Becker et al., 2010 ,
Clark et al., 2011 ,
Lemos et al., 2010 ,
Longworth et al., 2012 ,
Radyuk et al., 2010 ,
Akbar et al., 2011 ,
Johansson et al., 2005 ,
Tsai et al., 2008 ,
Marcu et al., 2011 ,
Vanha-Aho et al., 2012 ,
An et al., 2012 )
Drosophila Immune induced molecule 9
Drosophila Immune induced molecule 11
Drosophila Immune induced molecule 15
Secondary FlyBase
IDs References ( 135 )Generate a list of List References by type
Recent research papers ( 20 )
An et al., 2012, PLoS ONE 7(3): e34510Insect Neuropeptide Bursicon Homodimers Induce Innate Immune and Stress Genes during Molting by Activating the NF-κB Transcription Factor Relish. [FBrf0217909] Broderick et al., 2012, PLoS ONE 7(9): e44567Drosophila ninjurin a induces nonapoptotic cell death. [FBrf0219544] Fabian et al., 2012, Mol. Ecol. 21(19): 4748--4769Genome-wide patterns of latitudinal differentiation among populations of Drosophila melanogaster from North America. [FBrf0219505] Gilchrist et al., 2012, Genes Dev. 26(9): 933--944Regulating the regulators: the pervasive effects of Pol II pausing on stimulus-responsive gene networks. [FBrf0218258] Kalajdzic et al., 2012, PLoS ONE 7(6): e40296Use of mutagenesis, genetic mapping and next generation transcriptomics to investigate insecticide resistance mechanisms. [FBrf0218826] Lemaitre et al., 2012, J. Immunol. 188(11): 5210--5220Pillars Article: The Dorsoventral Regulatory Gene Cassette spatzle/Toll/cactus Controls the Potent Antifungal Response in Drosophila Adults. Cell. 1996. 86: 973-983. [FBrf0218343] Longworth et al., 2012, PLoS Genet. 8(4): e1002618A Shared Role for RBF1 and dCAP-D3 in the Regulation of Transcription with Consequences for Innate Immunity. [FBrf0218058] Pilátová and Dionne, 2012, PLoS ONE 7(11): e49745Burkholderia thailandensis Is Virulent in Drosophila melanogaster. [FBrf0220122] Seong et al., 2012, J. Radiat. Res. 53(2): 242--249Low-dose Radiation Induces Drosophila Innate Immunity through Toll Pathway Activation. [FBrf0218044] Tsuzuki et al., 2012, Sci. Rep. 2: 210Drosophila growth-blocking peptide-like factor mediates acute immune reactions during infectious and non-infectious stress. [FBrf0217467] Vanha-Aho et al., 2012, PLoS ONE 7(5): e37153Functional Characterization of the Infection-Inducible Peptide Edin in Drosophila melanogaster. [FBrf0218357] Wang et al., 2012, J. Immunol. 188(8): 3993--4000The Drosophila protein mustard tailors the innate immune response activated by the immune deficiency pathway. [FBrf0217978] Ahn et al., 2011, Bioorg. Med. Chem. Lett. 21(20): 6148--6153Substitution of the GalNAc-α-O-Thr¹¹ residue in drosocin with O-linked glyco-peptoid residue: effect on antibacterial activity and conformational change. [FBrf0217186] Akbar et al., 2011, J. Cell Biol. 192(3): 383--390The full-of-bacteria gene is required for phagosome maturation during immune defense in Drosophila. [FBrf0212933] Akhouayri et al., 2011, PLoS Pathog. 7(10): e1002319Toll-8/tollo negatively regulates antimicrobial response in the Drosophila respiratory epithelium. [FBrf0216452] Clark et al., 2011, Curr. Biol. 21(19): 1672--1677Multiple TGF-β Superfamily Signals Modulate the Adult Drosophila Immune Response. [FBrf0216429] Ladoukakis et al., 2011, Genome Biol. 12(11): R118Hundreds of putatively functional small open reading frames in Drosophila. [FBrf0218190] Marcu et al., 2011, PLoS ONE 6(1): e15361Innate Immune Responses of Drosophila melanogaster Are Altered by Spaceflight. [FBrf0212851] Ragab et al., 2011, EMBO J. 30(6): 1123--1136Drosophila Ras/MAPK signalling regulates innate immune responses in immune and intestinal stem cells. [FBrf0213275] Rao et al., 2011, Insect Biochem. Mol. Biol. 41(12): 982--992Manduca sexta moricin promoter elements can increase promoter activities of Drosophila melanogaster antimicrobial peptide genes. [FBrf0216595]
Recent reviews (0)
All reviews listed in FlyBase were published before 2011