A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\Gtp-bp

General Information
SymbolDmel\Gtp-bpSpeciesD. melanogaster
NameGTP-binding proteinAnnotation symbolCG2522
Feature typeprotein_coding_geneFlyBase IDFBgn0010391
Gene Model StatusCurrent Stock availability 2 publicly available
Also Known AsSrpRα
Genomic Location
Chromosome (arm)XRecombination map
Cytogenetic map10A6-10A6Sequence locationX:11,020,908..11,023,136 [-]

Genomic Maps

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modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene GTP-binding protein is referred to in FlyBase by the symbol Dmel\Gtp-bp (CG2522, FBgn0010391). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: signal recognition particle binding. There is experimental evidence that it is involved in the biological process: regulation of protein secretion; axonogenesis. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: ATPase, AAA+ type, core; Longin-like; Signal recognition particle receptor, alpha subunit, N-terminal; Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 06-18 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult midgut, larval hindgut, adult fat body, larval/adult salivary gland, larval trachea, adult spermathecae, adult male accessory gland, larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval midgut, adult hindgut, larval/adult Malpighian tubules, adult heart, larval fat body, adult ovary, adult testis, adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1639135_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of Gtp-bp. Gene sequence location is X:11020908..11023136.

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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2011_10
FB2012_01
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
10A6-10A6  
Limits computationally determined from genome sequence between P{EP}EP1321EP1321&P{EP}CG2061EP1537 and P{EP}CG11756EP1610  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
11C-11D  
11C-11D  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\Gtp-bp for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0073436 FBtr0073480 FBtr0073479 FBtr0073478 FBtr0073477 FBtr0073475 FBtr0073476 FBpp0073292 FBpp0073336 FBpp0073335 FBpp0073334 FBpp0073333 FBpp0073331 FBpp0073332 FBti0012833 FBti0131901
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0073480
  2074
  614
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0073336  
67.8  
614  
6.80  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Gtp-bp transcripts are expressed at high levels throughout embryogenesis with a peak between 12 and 18 hrs. They are found lateral to the dorsal-most regions of the ventral midline and show a segmentally repeating pattern.
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
western blot
Stage
Tissue/Position (including subcellular localization)
Reference
 
Comment:cultured neuroblasts
Additional Descriptive Data
In germ band extended embryos, Gtp-bp protein is detected in cells dorsal to the ectoderm and is distributed in a continuous layer from the stomodeal opening to the end of the germ band. It is also found at the anterior tip of the clypeolabrum and in the posterior gut. During germ band retraction, it becomes confined within the ventral midline, dorsal to the delaminating neuroblasts. The midline cells expressing Gtp-bp protein send a broad process across the midline just ventral to the yolk sac to the contralateral neuromere. At this stage, a single cell in each neuromere is detected. Later, protein is detected on axons that cross the midline and in other cells and processes in lateral regions of each neuromere. Starting in stage 13, Gtp-bp protein is detected in ventral, lateral and dorsal sensilla of the PNS. In later embryos, protein is detected in the intersegmental nerve and the segmental nerve on axons and on subsets of PNS cell soma.
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view Rpt3-RA Gtp-bp-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0010391


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0010391
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 06-18 hour embryonic stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0010391 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 5704
embryo 02-04hr
 
 572
embryo 04-06hr
 
 930
embryo 06-08hr
 
 4179
embryo 08-10hr
 
 6583
embryo 10-12hr
 
 14075
embryo 12-14hr
 
 7453
embryo 14-16hr
 
 15189
embryo 16-18hr
 
 9544
embryo 18-20hr
 
 5567
embryo 20-22hr
 
 3551
embryo 22-24hr
 
 2794
larva L1
 
 6858
larva L2
 
 9673
larva L3 12hr old
 
 7797
larva L3 puffstage 1-2
 
 4555
larva L3 puffstage 3-6
 
 4807
larva L3 puffstage 7-9
 
 4264
white prepupae new
 
 4524
white prepupae 12hr
 
 2910
white prepupae 24hr
 
 4037
pupae 2d postWPP
 
 4539
pupae 3d postWPP
 
 2865
pupae 4d postWPP
 
 3429
adult male 01day
 
 4131
adult male 05day
 
 4843
adult male 30day
 
 6314
adult female 01day
 
 7263
adult female 05day
 
 5696
adult female 30day
 
 6747
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (5704)
embryo 02-04hr
 (572)
embryo 04-06hr
 (930)
embryo 06-08hr
 (4179)
embryo 08-10hr
 (6583)
embryo 10-12hr
 (14075)
embryo 12-14hr
 (7453)
embryo 14-16hr
 (15189)
embryo 16-18hr
 (9544)
embryo 18-20hr
 (5567)
embryo 20-22hr
 (3551)
embryo 22-24hr
 (2794)
larva L1
 (6858)
larva L2
 (9673)
larva L3 12hr old
 (7797)
larva L3 puffstage 1-2
 (4555)
larva L3 puffstage 3-6
 (4807)
larva L3 puffstage 7-9
 (4264)
white prepupae new
 (4524)
white prepupae 12hr
 (2910)
white prepupae 24hr
 (4037)
pupae 2d postWPP
 (4539)
pupae 3d postWPP
 (2865)
pupae 4d postWPP
 (3429)
adult male 01day
 (4131)
adult male 05day
 (4843)
adult male 30day
 (6314)
adult female 01day
 (7263)
adult female 05day
 (5696)
adult female 30day
 (6747)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (5704)
embryo 02-04hr
 
 572
embryo 04-06hr
 
 930
embryo 06-08hr
 (4179)
embryo 08-10hr
 (6583)
embryo 10-12hr
 (14075)
embryo 12-14hr
 (7453)
embryo 14-16hr
 (15189)
embryo 16-18hr
 (9544)
embryo 18-20hr
 (5567)
embryo 20-22hr
 (3551)
embryo 22-24hr
 (2794)
larva L1
 (6858)
larva L2
 (9673)
larva L3 12hr old
 (7797)
larva L3 puffstage 1-2
 (4555)
larva L3 puffstage 3-6
 (4807)
larva L3 puffstage 7-9
 (4264)
white prepupae new
 (4524)
white prepupae 12hr
 (2910)
white prepupae 24hr
 (4037)
pupae 2d postWPP
 (4539)
pupae 3d postWPP
 (2865)
pupae 4d postWPP
 (3429)
adult male 01day
 (4131)
adult male 05day
 (4843)
adult male 30day
 (6314)
adult female 01day
 (7263)
adult female 05day
 (5696)
adult female 30day
 (6747)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 5704
embryo 02-04hr
 
 572
embryo 04-06hr
 
 930
embryo 06-08hr
 
 4179
embryo 08-10hr
 
 6583
embryo 10-12hr
 (14075)
embryo 12-14hr
 
 7453
embryo 14-16hr
 (15189)
embryo 16-18hr
 
 9544
embryo 18-20hr
 
 5567
embryo 20-22hr
 
 3551
embryo 22-24hr
 
 2794
larva L1
 
 6858
larva L2
 
 9673
larva L3 12hr old
 
 7797
larva L3 puffstage 1-2
 
 4555
larva L3 puffstage 3-6
 
 4807
larva L3 puffstage 7-9
 
 4264
white prepupae new
 
 4524
white prepupae 12hr
 
 2910
white prepupae 24hr
 
 4037
pupae 2d postWPP
 
 4539
pupae 3d postWPP
 
 2865
pupae 4d postWPP
 
 3429
adult male 01day
 
 4131
adult male 05day
 
 4843
adult male 30day
 
 6314
adult female 01day
 
 7263
adult female 05day
 
 5696
adult female 30day
 
 6747
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 5704
embryo 02-04hr
 
 572
embryo 04-06hr
 
 930
embryo 06-08hr
 
 4179
embryo 08-10hr
 
 6583
embryo 10-12hr
 
 14075
embryo 12-14hr
 
 7453
embryo 14-16hr
 
 15189
embryo 16-18hr
 
 9544
embryo 18-20hr
 
 5567
embryo 20-22hr
 
 3551
embryo 22-24hr
 
 2794
larva L1
 
 6858
larva L2
 
 9673
larva L3 12hr old
 
 7797
larva L3 puffstage 1-2
 
 4555
larva L3 puffstage 3-6
 
 4807
larva L3 puffstage 7-9
 
 4264
white prepupae new
 
 4524
white prepupae 12hr
 
 2910
white prepupae 24hr
 
 4037
pupae 2d postWPP
 
 4539
pupae 3d postWPP
 
 2865
pupae 4d postWPP
 
 3429
adult male 01day
 
 4131
adult male 05day
 
 4843
adult male 30day
 
 6314
adult female 01day
 
 7263
adult female 05day
 
 5696
adult female 30day
 
 6747
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0010391 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 5704
embryo 02-04hr
 
 572
embryo 04-06hr
 
 930
embryo 06-08hr
 
 4179
embryo 08-10hr
 
 6583
embryo 10-12hr
 
 14075
embryo 12-14hr
 
 7453
embryo 14-16hr
 
 15189
embryo 16-18hr
 
 9544
embryo 18-20hr
 
 5567
embryo 20-22hr
 
 3551
embryo 22-24hr
 
 2794
larva L1
 
 6858
larva L2
 
 9673
larva L3 12hr old
 
 7797
larva L3 puffstage 1-2
 
 4555
larva L3 puffstage 3-6
 
 4807
larva L3 puffstage 7-9
 
 4264
white prepupae new
 
 4524
white prepupae 12hr
 
 2910
white prepupae 24hr
 
 4037
pupae 2d postWPP
 
 4539
pupae 3d postWPP
 
 2865
pupae 4d postWPP
 
 3429
adult male 01day
 
 4131
adult male 05day
 
 4843
adult male 30day
 
 6314
adult female 01day
 
 7263
adult female 05day
 
 5696
adult female 30day
 
 6747
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (5704)
embryo 02-04hr
 (572)
embryo 04-06hr
 (930)
embryo 06-08hr
 (4179)
embryo 08-10hr
 (6583)
embryo 10-12hr
 (14075)
embryo 12-14hr
 (7453)
embryo 14-16hr
 (15189)
embryo 16-18hr
 (9544)
embryo 18-20hr
 (5567)
embryo 20-22hr
 (3551)
embryo 22-24hr
 (2794)
larva L1
 (6858)
larva L2
 (9673)
larva L3 12hr old
 (7797)
larva L3 puffstage 1-2
 (4555)
larva L3 puffstage 3-6
 (4807)
larva L3 puffstage 7-9
 (4264)
white prepupae new
 (4524)
white prepupae 12hr
 (2910)
white prepupae 24hr
 (4037)
pupae 2d postWPP
 (4539)
pupae 3d postWPP
 (2865)
pupae 4d postWPP
 (3429)
adult male 01day
 (4131)
adult male 05day
 (4843)
adult male 30day
 (6314)
adult female 01day
 (7263)
adult female 05day
 (5696)
adult female 30day
 (6747)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (5704)
embryo 02-04hr
 
 572
embryo 04-06hr
 
 930
embryo 06-08hr
 (4179)
embryo 08-10hr
 (6583)
embryo 10-12hr
 (14075)
embryo 12-14hr
 (7453)
embryo 14-16hr
 (15189)
embryo 16-18hr
 (9544)
embryo 18-20hr
 (5567)
embryo 20-22hr
 (3551)
embryo 22-24hr
 (2794)
larva L1
 (6858)
larva L2
 (9673)
larva L3 12hr old
 (7797)
larva L3 puffstage 1-2
 (4555)
larva L3 puffstage 3-6
 (4807)
larva L3 puffstage 7-9
 (4264)
white prepupae new
 (4524)
white prepupae 12hr
 (2910)
white prepupae 24hr
 (4037)
pupae 2d postWPP
 (4539)
pupae 3d postWPP
 (2865)
pupae 4d postWPP
 (3429)
adult male 01day
 (4131)
adult male 05day
 (4843)
adult male 30day
 (6314)
adult female 01day
 (7263)
adult female 05day
 (5696)
adult female 30day
 (6747)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 5704
embryo 02-04hr
 
 572
embryo 04-06hr
 
 930
embryo 06-08hr
 
 4179
embryo 08-10hr
 
 6583
embryo 10-12hr
 14075
embryo 12-14hr
 
 7453
embryo 14-16hr
 15189
embryo 16-18hr
 
 9544
embryo 18-20hr
 
 5567
embryo 20-22hr
 
 3551
embryo 22-24hr
 
 2794
larva L1
 
 6858
larva L2
 
 9673
larva L3 12hr old
 
 7797
larva L3 puffstage 1-2
 
 4555
larva L3 puffstage 3-6
 
 4807
larva L3 puffstage 7-9
 
 4264
white prepupae new
 
 4524
white prepupae 12hr
 
 2910
white prepupae 24hr
 
 4037
pupae 2d postWPP
 
 4539
pupae 3d postWPP
 
 2865
pupae 4d postWPP
 
 3429
adult male 01day
 
 4131
adult male 05day
 
 4843
adult male 30day
 
 6314
adult female 01day
 
 7263
adult female 05day
 
 5696
adult female 30day
 
 6747
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 5704
embryo 02-04hr
 
 572
embryo 04-06hr
 
 930
embryo 06-08hr
 
 4179
embryo 08-10hr
 
 6583
embryo 10-12hr
 
 14075
embryo 12-14hr
 
 7453
embryo 14-16hr
 
 15189
embryo 16-18hr
 
 9544
embryo 18-20hr
 
 5567
embryo 20-22hr
 
 3551
embryo 22-24hr
 
 2794
larva L1
 
 6858
larva L2
 
 9673
larva L3 12hr old
 
 7797
larva L3 puffstage 1-2
 
 4555
larva L3 puffstage 3-6
 
 4807
larva L3 puffstage 7-9
 
 4264
white prepupae new
 
 4524
white prepupae 12hr
 
 2910
white prepupae 24hr
 
 4037
pupae 2d postWPP
 
 4539
pupae 3d postWPP
 
 2865
pupae 4d postWPP
 
 3429
adult male 01day
 
 4131
adult male 05day
 
 4843
adult male 30day
 
 6314
adult female 01day
 
 7263
adult female 05day
 
 5696
adult female 30day
 
 6747
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0010391


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0010391
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult midgut, larval hindgut, adult fat body, larval/adult salivary gland, larval trachea, adult spermathecae, adult male accessory gland, larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval midgut, adult hindgut, larval/adult Malpighian tubules, adult heart, larval fat body, adult ovary, adult testis, adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0010391 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 338.5
Larval Midgut
 
 469.4
Larval Hindgut
 
 525.5
Larval Malpighian Tubules
 
 337.4
Larval Fat Body
 
 412.4
Larval Salivary Gland
 
 2696.1
Larval Trachea
 
 786.275
Larval Carcass
 
 697.55
Adult Head
 
 344.9
Adult Eye
 
 278.85
Adult Brain
 
 258.8
Adult Thoracic-Abdominal Ganglion
 
 338.4
Adult Crop
 
 464.8
Adult Midgut
 
 560
Adult Hindgut
 
 402.7
Adult Malpighian Tubules
 
 293.4
Adult Fat Body
 
 578.2
Adult Salivary Gland
 
 2687.6
Adult Heart
 
 375.725
Adult VirginFemale Spermatheca
 
 696.9
Adult InseminatedFemale Spermatheca
 
 931
Adult Ovary
 
 434.8
Adult Testis
 
 115.7
Adult Male Accessory Gland
 
 2013.6
Adult Carcass
 
 455
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 338.5
Larval Midgut
 
 469.4
Larval Hindgut
 525.5
Larval Malpighian Tubules
 
 337.4
Larval Fat Body
 
 412.4
Larval Salivary Gland
 (2696.1)
Larval Trachea
 (786.275)
Larval Carcass
 (697.55)
Adult Head
 
 344.9
Adult Eye
 
 278.85
Adult Brain
 
 258.8
Adult Thoracic-Abdominal Ganglion
 
 338.4
Adult Crop
 
 464.8
Adult Midgut
 (560)
Adult Hindgut
 
 402.7
Adult Malpighian Tubules
 
 293.4
Adult Fat Body
 (578.2)
Adult Salivary Gland
 (2687.6)
Adult Heart
 
 375.725
Adult VirginFemale Spermatheca
 (696.9)
Adult InseminatedFemale Spermatheca
 (931)
Adult Ovary
 
 434.8
Adult Testis
 
 115.7
Adult Male Accessory Gland
 (2013.6)
Adult Carcass
 
 455
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 338.5
Larval Midgut
 
 469.4
Larval Hindgut
 
 525.5
Larval Malpighian Tubules
 
 337.4
Larval Fat Body
 
 412.4
Larval Salivary Gland
 (2696.1)
Larval Trachea
 
 786.275
Larval Carcass
 
 697.55
Adult Head
 
 344.9
Adult Eye
 
 278.85
Adult Brain
 
 258.8
Adult Thoracic-Abdominal Ganglion
 
 338.4
Adult Crop
 
 464.8
Adult Midgut
 
 560
Adult Hindgut
 
 402.7
Adult Malpighian Tubules
 
 293.4
Adult Fat Body
 
 578.2
Adult Salivary Gland
 (2687.6)
Adult Heart
 
 375.725
Adult VirginFemale Spermatheca
 
 696.9
Adult InseminatedFemale Spermatheca
 
 931
Adult Ovary
 
 434.8
Adult Testis
 
 115.7
Adult Male Accessory Gland
 (2013.6)
Adult Carcass
 
 455
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 338.5
Larval Midgut
 
 469.4
Larval Hindgut
 
 525.5
Larval Malpighian Tubules
 
 337.4
Larval Fat Body
 
 412.4
Larval Salivary Gland
 
 2696.1
Larval Trachea
 
 786.275
Larval Carcass
 
 697.55
Adult Head
 
 344.9
Adult Eye
 
 278.85
Adult Brain
 
 258.8
Adult Thoracic-Abdominal Ganglion
 
 338.4
Adult Crop
 
 464.8
Adult Midgut
 
 560
Adult Hindgut
 
 402.7
Adult Malpighian Tubules
 
 293.4
Adult Fat Body
 
 578.2
Adult Salivary Gland
 
 2687.6
Adult Heart
 
 375.725
Adult VirginFemale Spermatheca
 
 696.9
Adult InseminatedFemale Spermatheca
 
 931
Adult Ovary
 
 434.8
Adult Testis
 
 115.7
Adult Male Accessory Gland
 
 2013.6
Adult Carcass
 
 455
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0010391 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 338.5
Larval Midgut
 
 469.4
Larval Hindgut
 
 525.5
Larval Malpighian Tubules
 
 337.4
Larval Fat Body
 
 412.4
Larval Salivary Gland
 
 2696.1
Larval Trachea
 
 786.275
Larval Carcass
 
 697.55
Adult Head
 
 344.9
Adult Eye
 
 278.85
Adult Brain
 
 258.8
Adult Thoracic-Abdominal Ganglion
 
 338.4
Adult Crop
 
 464.8
Adult Midgut
 
 560
Adult Hindgut
 
 402.7
Adult Malpighian Tubules
 
 293.4
Adult Fat Body
 
 578.2
Adult Salivary Gland
 
 2687.6
Adult Heart
 
 375.725
Adult VirginFemale Spermatheca
 
 696.9
Adult InseminatedFemale Spermatheca
 
 931
Adult Ovary
 
 434.8
Adult Testis
 
 115.7
Adult Male Accessory Gland
 
 2013.6
Adult Carcass
 
 455
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 338.5
Larval Midgut
 
 469.4
Larval Hindgut
 525.5
Larval Malpighian Tubules
 
 337.4
Larval Fat Body
 
 412.4
Larval Salivary Gland
 (2696.1)
Larval Trachea
 786.275
Larval Carcass
 697.55
Adult Head
 
 344.9
Adult Eye
 
 278.85
Adult Brain
 
 258.8
Adult Thoracic-Abdominal Ganglion
 
 338.4
Adult Crop
 
 464.8
Adult Midgut
 560
Adult Hindgut
 
 402.7
Adult Malpighian Tubules
 
 293.4
Adult Fat Body
 578.2
Adult Salivary Gland
 (2687.6)
Adult Heart
 
 375.725
Adult VirginFemale Spermatheca
 696.9
Adult InseminatedFemale Spermatheca
 (931)
Adult Ovary
 
 434.8
Adult Testis
 
 115.7
Adult Male Accessory Gland
 (2013.6)
Adult Carcass
 
 455
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 338.5
Larval Midgut
 
 469.4
Larval Hindgut
 
 525.5
Larval Malpighian Tubules
 
 337.4
Larval Fat Body
 
 412.4
Larval Salivary Gland
 (2696.1)
Larval Trachea
 
 786.275
Larval Carcass
 
 697.55
Adult Head
 
 344.9
Adult Eye
 
 278.85
Adult Brain
 
 258.8
Adult Thoracic-Abdominal Ganglion
 
 338.4
Adult Crop
 
 464.8
Adult Midgut
 
 560
Adult Hindgut
 
 402.7
Adult Malpighian Tubules
 
 293.4
Adult Fat Body
 
 578.2
Adult Salivary Gland
 (2687.6)
Adult Heart
 
 375.725
Adult VirginFemale Spermatheca
 
 696.9
Adult InseminatedFemale Spermatheca
 
 931
Adult Ovary
 
 434.8
Adult Testis
 
 115.7
Adult Male Accessory Gland
 (2013.6)
Adult Carcass
 
 455
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 338.5
Larval Midgut
 
 469.4
Larval Hindgut
 
 525.5
Larval Malpighian Tubules
 
 337.4
Larval Fat Body
 
 412.4
Larval Salivary Gland
 
 2696.1
Larval Trachea
 
 786.275
Larval Carcass
 
 697.55
Adult Head
 
 344.9
Adult Eye
 
 278.85
Adult Brain
 
 258.8
Adult Thoracic-Abdominal Ganglion
 
 338.4
Adult Crop
 
 464.8
Adult Midgut
 
 560
Adult Hindgut
 
 402.7
Adult Malpighian Tubules
 
 293.4
Adult Fat Body
 
 578.2
Adult Salivary Gland
 
 2687.6
Adult Heart
 
 375.725
Adult VirginFemale Spermatheca
 
 696.9
Adult InseminatedFemale Spermatheca
 
 931
Adult Ovary
 
 434.8
Adult Testis
 
 115.7
Adult Male Accessory Gland
 
 2013.6
Adult Carcass
 
 455
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 344.9
 
NA 
Eye
 
 278.85
 
NA 
Brain
 
 258.8
 
338.5 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 338.4
 
NA 
Crop
 
 464.8
 
469.4 
Midgut
 
 560
 
525.5 
Hindgut
 
 402.7
 
337.4 
Malpighian Tubules
 
 293.4
 
412.4 
Fat Body
 
 578.2
 
2696.1 
Salivary Gland
 
 2687.6
 
NA 
Heart
 
 375.725
 
786.275 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 696.9
 
NA 
InseminatedFemale Spermatheca
 
 931
 
NA 
Ovary
 
 434.8
 
NA 
Testis
 
 115.7
 
NA 
Male Accessory Gland
 
 2013.6
 
697.55 
Carcass
 
 455

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 1 )
For All Classical Alleles Show

Allele of Gtp-bpClassMutagenStocksKnown lesion
Gtp-bpG9511 --
hide Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show

Allele of Gtp-bpClassMutagenStocksKnown lesion
Gtp-bpGD64821 Yes
hide Aneuploid Aberrations
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
UAS construct
Insertions
Type of insertions
Name
Expression data
insertion of mobile activating element
hide Gene Ontology: Function, Process & Cellular Component ( 11 unique terms )
hide Terms Based on Experimental Evidence ( 4 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
inferred from expression pattern
(assigned by UniProtKB)
inferred from expression pattern
(assigned by UniProtKB)
Cellular Component
CV term
References
inferred from direct assay
(assigned by UniProtKB)
inferred from direct assay
hide Terms Based on Predictions or Assertions ( 7 terms )
Molecular Function
CV term
References
inferred from electronic annotation with InterPro:IPR007222
inferred from electronic annotation with InterPro:IPR000897, InterPro:IPR007222, InterPro:IPR013822
non-traceable author statement
non-traceable author statement
(assigned by UniProtKB)
inferred from sequence or structural similarity with NCBI_gi:4507223
Biological Process
CV term
References
Cellular Component
CV term
References
inferred from sequence or structural similarity with NCBI_gi:4507223
hide Sequence Ontology: Class of Gene
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hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
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Interacts with
Please look at the allele data for full details of the genetic interactions
Gtp-bp allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 2 )
Bloomington
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 68 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Source for merge of: Gtp-bp BEST:CK00309
Source for merge of: Gtp-bp CG2522
Additional comments
Source for merge of Gtp-bp BEST:CK00309 was sequence comparison (date:030820).
hide Other Comments
Identification: cDNA screen for secreted and transmembrane proteins expressed during embryogenesis.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
REDfly - A database of transcriptional regulatory elements.
hide Synonyms & Secondary IDs ( 9 )
Reported As
Symbol Synonym
BEST:CK00309
 
Name Synonym
GTP binding protein
Secondary FlyBase IDs
  • FBgn0025711
  • FBgn0030267
hide References ( 24 )
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hide Recent research papers ( 3 )
Avet-Rochex et al., 2010, BMC Dev. Biol. 10: 65
An in vivo RNA interference screen identifies gene networks controlling Drosophila melanogaster blood cell homeostasis. [FBrf0211137]
Fox et al., 2010, J. Cell Biol. 191(3): 479--492
The CrebA/Creb3-like transcription factors are major and direct regulators of secretory capacity. [FBrf0212217]
Seinen et al., 2010, PLoS ONE 5(10): e13119
RNAi Experiments in D. melanogaster: Solutions to the Overlooked Problem of Off-Targets Shared by Independent dsRNAs. [FBrf0212057]