• Home
• Tools
  • Tools Overview
  • Query Tools

    
    • QuickSearch
    • QueryBuilder
    • TermLink
    • CytoSearch
    • RNA-Seq Search
    • Interactions Browser
    • ImageBrowse
    • Find A Person
    • Google™ FlyBase
  • Genomic/Map Tools

    
    • BLAST
    • GBrowse
    • GBrowse 2 Beta
    • CytoSearch
    • Feature Mapper
    • Aberrations Maps
    • Chromosome Maps
    • Coordinates Converter
  • Retrieve/Convert

    
    • Batch Download
    • Coordinates Converter
    • ID Converter
  • Data Submission

    
    • Fast-Track Your Paper
    • Submit Personal Comm
    • Add A New Person
    • Update Person Info
  • People

    
    • Find A Person
    • Add A New Person
    • Update Person Info
• Files
  • Files Overview
  • Current release
  • Archived releases
  • Map Conversion
  • FTP site:
  • Releases (FTP)
  • Genomes (FTP)
• Species
  • Phylogeny
  • Sequenced Species
  • Synteny Table
  • Color Illustrations
  • Abbreviations
• Documents
  • About FlyBase
  • Reference Manual:
  • Sections
  • Contents
  • Nomenclature
  • Release Notes
• Resources
  • All Resources
  • Model Organisms
  • Stock Collections
  • Vectors & Constructs
  • Other links:
  • BDGP
  • DGRC
  • DIS by issue
  • FlyExpress
  • Interactive Fly
  • modENCODE
  • Textpresso for Fly
• News
  • News
  • FlyBase Forum
  • FlyBase Positions
  • Meetings
  • Courses
  • Fly Board
  • White papers
  • Funding
  • bionet.dros
• Help
  • Google™ FlyBase
  • Site Map
  • FAQs
  • FlyBase Guides
  • Video Tutorials
  • Report help
  • New to Flies
  • Pers. comm.
  • Author guidelines
  • Contact FlyBase
• Archives
  • Prior Release
  • Other Archives
  • Coordinate Converter

Gene Dmel\RpS19a

General Information
Symbol	Dmel\RpS19a	Species	D. melanogaster
Name	Ribosomal protein S19a	Annotation symbol	CG4464
Feature type	protein_coding_gene	FlyBase ID	FBgn0010412
Gene Model Status	Current	Stock availability	2 publicly available
Also Known As	RpS19
Genomic Location
Chromosome (arm)	X	Recombination map
Cytogenetic map	14F4-14F4	Sequence location	X:16,531,927..16,533,282 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Ribosomal protein S19a is referred to in FlyBase by the symbol Dmel\RpS19a (CG4464, FBgn0010412). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process: translation. 3 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. Protein features are: Ribosomal protein S19e; Ribosomal protein S19e, conserved site. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of very high expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: High levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1637448_s_at completely aligns to an exonic region common to each of the 3 FlyBase-annotated transcript isoforms of RpS19a. Gene sequence location is X:16531927..16533282.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 14F4-14F4   Limits computationally determined from genome sequence between P{EP}EP1547EP1547 and P{EP}CG4928EP1341
Experimentally Determined Cytological Location
Cytogenetic map Notes References 15A1-15A1     (Willig, 1999.12.13) 15A-15A     (Baumgartner, 1993.6.3) 15A-15A   (determined by in situ hybridisation)   (Baumgartner et al., 1993)
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\RpS19a for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.50 Annotated transcripts do not represent all supported alternative splices within 5' UTR. Low-frequency RNA-Seq exon junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) RpS19a-RA FBtr0074311  NM_078652   620   156 RpS19a-RB FBtr0074312  NM_167526   642   156 RpS19a-RC FBtr0074313  NM_167527   925   156 RpS19a-RD FBtr0340149     949   156
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein RpS19a-PA   FBpp0074086   17.3   156   10.80     NP_523376   AAF48633 RpS19a-PB   FBpp0074087   17.3   156   10.80     NP_727992   AAN09412 RpS19a-PC   FBpp0074088   17.3   156   10.80     NP_727993   AAN09413 RpS19a-PD   FBpp0309135   17.3   156   10.80
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Ribosomal protein S19e, conserved site (IPR018277) Ribosomal protein S19e (IPR001266)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA391926   AA536506   AA697158   AA802013   AA803590   AA803697   AA804126   AE014298 AAF48633   AE014298 AAN09412   AE014298 AAN09413   AF216206 AAF65682   AI063200   AI063219   AI108024   AI108041   AI108370   AI109506   AI109507   AI110057   AI134304   AI238188   AI238338   AI257496   AI258673   AI259275   AI292432   AI294832   AI295805   AI295900   AI387594   AI403077   AI404587   AI404650   AI456653   AI518083   AI534917   AI542329   AI944588   AY118868 AAM50728   AY231734   AY232066   BG632083   BG636443   BG640388   BG640643   BI142234   BI162883   BI164889   BI167164   BI167520   BI170572   BI173917   BI214745   BI228152   BI228164   BI230214   BI232314   BI235594   BI235693   BI235880   BI237569   BI238604   BI239554   BI242806   BI243076   BI243452   BI351756   BI351820   BI351907   BI352306   BI353292   BI354164   BI354737   BI354975   BI355083   BI355879   BI356143   BI356533   BI356716   BI361551   BI362150   BI367385   BI367564   BI369254   BI369466   BI373483   BI373544   BI374200   BI374403   BI486894   BI563359   BI563436   BI564351   BI567544   BI570022   BI570934   BI571683   BI572034   BI573045   BI574110   BI575071   BI575438   BI575538   BI575886   BI576107   BI576537   BI577005   BI580880   BI583187   BI585444   BI586716   BI586863   BI589374   BI589379   BI589843   BI590244   BI590957   BI591238   BI591410   BI612271   BI612972   BI614762   BI615434   BI616371   BI616472   BI617539   BI618013   BI618817   BI619306   BI622260   BI624777   BI625943   BI626183   BI630265   BI630679   BI630953   BI631309   BI632364   BI633606   BI634285   BI635757   BI636784   BI636800   BI637640   BI640620   BI640971   BI641876   BP545213   BP545214   BP548764   BP550780   BP550781   BQ103006   BT030959   CA803313   CA803351   CA803548   CA803591   CA805767   CA807449   CK657338   CK658529   CK658638   CK660664   CK660789   CO152709   CO152747   CO153931   CO154024   CO154070   CO154272   CO154792   CO154808   CO155067   CO155931   CO156005   CO156043   CO156155   CO156299   CO156649   CO156733   CO156803   CO181061   CO184252   CO184523   CO191977   CO192402   CO264663   CO279754   CO281028   CO284076   CO314331   CO316227   CO334030   CO335616   CO336009   CO336170   CO336659   CO337901   CO337913   CO337981   CO338043   EC065413   EC079441   EC087800   EC251333   EC261257   EC261843   EC261863   EC261974   EC262490   EC262498   EC262501   EC262859   EC262985   EC263001   EC263011   EC264345   EC264764   EC264994   EC265382   EC265542   EC265812   EC265821   EC266421   EC266445   EC267200   EC267422   EC267751   EC267828   EL879259   EL879260   EL879894   EL879895   EL881807   EL881808   EL883536   EL883537   EL886115   EL886116   EV575222   EV575224   EV577296   EV580171   EV580594   EV581087   EV581558   EV582920   EV585411   EV585495   EV586156   EV589031   EV591005   EV595323   EV595387   EV596086   EV596509   EV596969   EV597219   EV597221   EV597247   EV597340   EV598222   EV598606   EV599571   EV599874   EV599894   EV600265   FJ458407   GH944308   GH946998   GH948494   GH948532   GH951688   GH951996   GH952961   GH953606   GH955368   GH959503   GH965957   GH966316   GH968479   GH969862   GH972952   GH973548   GH974358   GH976426   GH980882   GH980883   GH981038   X73153 CAA51677
UniProtKB/Swiss-Prot	P39018
UniProtKB/TrEMBL	E2QD65
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
ribosome inferred from direct assay (Alonso and Santaren, 2006)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    2548.8 Larval Midgut    4225.3 Larval Hindgut    3920 Larval Malpighian Tubules    4854.6 Larval Fat Body    7964.2 Larval Salivary Gland    7195.2 Larval Trachea    5508.95 Larval Carcass    4429.55 Adult Head    4261.2 Adult Eye    5578.75 Adult Brain    2791 Adult Thoracic-Abdominal Ganglion    3534.3 Adult Crop    5697 Adult Midgut    4931.7 Adult Hindgut    4575.2 Adult Malpighian Tubules    4158.5 Adult Fat Body    5142.2 Adult Salivary Gland    11727.5 Adult Heart    6132.775 Adult VirginFemale Spermatheca    3733.5 Adult InseminatedFemale Spermatheca    4207.2 Adult Ovary    3164.7 Adult Testis    1108.1 Adult Male Accessory Gland    8085.7 Adult Carcass    5292.3 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  (2548.8) Larval Midgut  (4225.3) Larval Hindgut  (3920) Larval Malpighian Tubules  (4854.6) Larval Fat Body  (7964.2) Larval Salivary Gland  (7195.2) Larval Trachea  (5508.95) Larval Carcass  (4429.55) Adult Head  (4261.2) Adult Eye  (5578.75) Adult Brain  (2791) Adult Thoracic-Abdominal Ganglion  (3534.3) Adult Crop  (5697) Adult Midgut  (4931.7) Adult Hindgut  (4575.2) Adult Malpighian Tubules  (4158.5) Adult Fat Body  (5142.2) Adult Salivary Gland  (11727.5) Adult Heart  (6132.775) Adult VirginFemale Spermatheca  (3733.5) Adult InseminatedFemale Spermatheca  (4207.2) Adult Ovary  (3164.7) Adult Testis  (1108.1) Adult Male Accessory Gland  (8085.7) Adult Carcass  (5292.3) Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System  (2548.8) Larval Midgut  (4225.3) Larval Hindgut  (3920) Larval Malpighian Tubules  (4854.6) Larval Fat Body  (7964.2) Larval Salivary Gland  (7195.2) Larval Trachea  (5508.95) Larval Carcass  (4429.55) Adult Head  (4261.2) Adult Eye  (5578.75) Adult Brain  (2791) Adult Thoracic-Abdominal Ganglion  (3534.3) Adult Crop  (5697) Adult Midgut  (4931.7) Adult Hindgut  (4575.2) Adult Malpighian Tubules  (4158.5) Adult Fat Body  (5142.2) Adult Salivary Gland  (11727.5) Adult Heart  (6132.775) Adult VirginFemale Spermatheca  (3733.5) Adult InseminatedFemale Spermatheca  (4207.2) Adult Ovary  (3164.7) Adult Testis  (1108.1) Adult Male Accessory Gland  (8085.7) Adult Carcass  (5292.3) Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    2548.8 Larval Midgut    4225.3 Larval Hindgut    3920 Larval Malpighian Tubules    4854.6 Larval Fat Body    7964.2 Larval Salivary Gland    7195.2 Larval Trachea    5508.95 Larval Carcass    4429.55 Adult Head    4261.2 Adult Eye    5578.75 Adult Brain    2791 Adult Thoracic-Abdominal Ganglion    3534.3 Adult Crop    5697 Adult Midgut    4931.7 Adult Hindgut    4575.2 Adult Malpighian Tubules    4158.5 Adult Fat Body    5142.2 Adult Salivary Gland    11727.5 Adult Heart    6132.775 Adult VirginFemale Spermatheca    3733.5 Adult InseminatedFemale Spermatheca    4207.2 Adult Ovary    3164.7 Adult Testis    1108.1 Adult Male Accessory Gland    8085.7 Adult Carcass    5292.3 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    2548.8 Larval Midgut    4225.3 Larval Hindgut    3920 Larval Malpighian Tubules    4854.6 Larval Fat Body    7964.2 Larval Salivary Gland    7195.2 Larval Trachea    5508.95 Larval Carcass    4429.55 Adult Head    4261.2 Adult Eye    5578.75 Adult Brain    2791 Adult Thoracic-Abdominal Ganglion    3534.3 Adult Crop    5697 Adult Midgut    4931.7 Adult Hindgut    4575.2 Adult Malpighian Tubules    4158.5 Adult Fat Body    5142.2 Adult Salivary Gland    11727.5 Adult Heart    6132.775 Adult VirginFemale Spermatheca    3733.5 Adult InseminatedFemale Spermatheca    4207.2 Adult Ovary    3164.7 Adult Testis    1108.1 Adult Male Accessory Gland    8085.7 Adult Carcass    5292.3 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  (2548.8) Larval Midgut  (4225.3) Larval Hindgut  (3920) Larval Malpighian Tubules  (4854.6) Larval Fat Body  (7964.2) Larval Salivary Gland  (7195.2) Larval Trachea  (5508.95) Larval Carcass  (4429.55) Adult Head  (4261.2) Adult Eye  (5578.75) Adult Brain  (2791) Adult Thoracic-Abdominal Ganglion  (3534.3) Adult Crop  (5697) Adult Midgut  (4931.7) Adult Hindgut  (4575.2) Adult Malpighian Tubules  (4158.5) Adult Fat Body  (5142.2) Adult Salivary Gland  (11727.5) Adult Heart  (6132.775) Adult VirginFemale Spermatheca  (3733.5) Adult InseminatedFemale Spermatheca  (4207.2) Adult Ovary  (3164.7) Adult Testis  (1108.1) Adult Male Accessory Gland  (8085.7) Adult Carcass  (5292.3) Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System  (2548.8) Larval Midgut  (4225.3) Larval Hindgut  (3920) Larval Malpighian Tubules  (4854.6) Larval Fat Body  (7964.2) Larval Salivary Gland  (7195.2) Larval Trachea  (5508.95) Larval Carcass  (4429.55) Adult Head  (4261.2) Adult Eye  (5578.75) Adult Brain  (2791) Adult Thoracic-Abdominal Ganglion  (3534.3) Adult Crop  (5697) Adult Midgut  (4931.7) Adult Hindgut  (4575.2) Adult Malpighian Tubules  (4158.5) Adult Fat Body  (5142.2) Adult Salivary Gland  (11727.5) Adult Heart  (6132.775) Adult VirginFemale Spermatheca  (3733.5) Adult InseminatedFemale Spermatheca  (4207.2) Adult Ovary  (3164.7) Adult Testis  1108.1 Adult Male Accessory Gland  (8085.7) Adult Carcass  (5292.3) Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    2548.8 Larval Midgut    4225.3 Larval Hindgut    3920 Larval Malpighian Tubules    4854.6 Larval Fat Body    7964.2 Larval Salivary Gland    7195.2 Larval Trachea    5508.95 Larval Carcass    4429.55 Adult Head    4261.2 Adult Eye    5578.75 Adult Brain    2791 Adult Thoracic-Abdominal Ganglion    3534.3 Adult Crop    5697 Adult Midgut    4931.7 Adult Hindgut    4575.2 Adult Malpighian Tubules    4158.5 Adult Fat Body    5142.2 Adult Salivary Gland    11727.5 Adult Heart    6132.775 Adult VirginFemale Spermatheca    3733.5 Adult InseminatedFemale Spermatheca    4207.2 Adult Ovary    3164.7 Adult Testis    1108.1 Adult Male Accessory Gland    8085.7 Adult Carcass    5292.3 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    4261.2   NA  Eye    5578.75   NA  Brain    2791   2548.8  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    3534.3   NA  Crop    5697   4225.3  Midgut    4931.7   3920  Hindgut    4575.2   4854.6  Malpighian Tubules    4158.5   7964.2  Fat Body    5142.2   7195.2  Salivary Gland    11727.5   NA  Heart    6132.775   5508.95  Trachea    NA   NA  VirginFemale Spermatheca    3733.5   NA  InseminatedFemale Spermatheca    4207.2   NA  Ovary    3164.7   NA  Testis    1108.1   NA  Male Accessory Gland    8085.7   4429.55  Carcass    5292.3 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    843 central nervous system, larvae L3    366 central nervous system, pupae P8    139 head, virgin 1-day female    203 head, virgin 4-day female    268 head, virgin 20-day female    678 head, mated 1-day female    163 head, mated 4-day female    207 head, mated 20-day female    506 head, mated 1-day male    201 head, mated 4-day male    137 head, mated 20-day male    283 salivary gland, larvae L3 wandering    226 salivary gland, white prepupae    616 digestive system, larvae L3 wandering    361 digestive system, 1-day adult    355 digestive system, 4-day adult    244 digestive system, 20-day adult    404 fat body, larvae L3 wandering    210 fat body, white prepupae    207 fat body, pupae P8    391 carcass, larvae L3 wandering    394 carcass, 1-day adult    194 carcass, 4-day adult    191 carcass, 20-day adult    359 ovary, virgin 4-day female    391 ovary, mated 4-day female    346 testis, mated 4-day male    160 accessory gland, mated 4-day male    453 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (843) central nervous system, larvae L3  (366) central nervous system, pupae P8  (139) head, virgin 1-day female  (203) head, virgin 4-day female  (268) head, virgin 20-day female  (678) head, mated 1-day female  (163) head, mated 4-day female  (207) head, mated 20-day female  (506) head, mated 1-day male  (201) head, mated 4-day male  (137) head, mated 20-day male  (283) salivary gland, larvae L3 wandering  (226) salivary gland, white prepupae  (616) digestive system, larvae L3 wandering  (361) digestive system, 1-day adult  (355) digestive system, 4-day adult  (244) digestive system, 20-day adult  (404) fat body, larvae L3 wandering  (210) fat body, white prepupae  (207) fat body, pupae P8  (391) carcass, larvae L3 wandering  (394) carcass, 1-day adult  (194) carcass, 4-day adult  (191) carcass, 20-day adult  (359) ovary, virgin 4-day female  (391) ovary, mated 4-day female  (346) testis, mated 4-day male  (160) accessory gland, mated 4-day male  (453) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (843) central nervous system, larvae L3  (366) central nervous system, pupae P8  (139) head, virgin 1-day female  (203) head, virgin 4-day female  (268) head, virgin 20-day female  (678) head, mated 1-day female  (163) head, mated 4-day female  (207) head, mated 20-day female  (506) head, mated 1-day male  (201) head, mated 4-day male  (137) head, mated 20-day male  (283) salivary gland, larvae L3 wandering  (226) salivary gland, white prepupae  (616) digestive system, larvae L3 wandering  (361) digestive system, 1-day adult  (355) digestive system, 4-day adult  (244) digestive system, 20-day adult  (404) fat body, larvae L3 wandering  (210) fat body, white prepupae  (207) fat body, pupae P8  (391) carcass, larvae L3 wandering  (394) carcass, 1-day adult  (194) carcass, 4-day adult  (191) carcass, 20-day adult  (359) ovary, virgin 4-day female  (391) ovary, mated 4-day female  (346) testis, mated 4-day male  (160) accessory gland, mated 4-day male  (453) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    843 central nervous system, larvae L3    366 central nervous system, pupae P8    139 head, virgin 1-day female    203 head, virgin 4-day female    268 head, virgin 20-day female    678 head, mated 1-day female    163 head, mated 4-day female    207 head, mated 20-day female    506 head, mated 1-day male    201 head, mated 4-day male    137 head, mated 20-day male    283 salivary gland, larvae L3 wandering    226 salivary gland, white prepupae    616 digestive system, larvae L3 wandering    361 digestive system, 1-day adult    355 digestive system, 4-day adult    244 digestive system, 20-day adult    404 fat body, larvae L3 wandering    210 fat body, white prepupae    207 fat body, pupae P8    391 carcass, larvae L3 wandering    394 carcass, 1-day adult    194 carcass, 4-day adult    191 carcass, 20-day adult    359 ovary, virgin 4-day female    391 ovary, mated 4-day female    346 testis, mated 4-day male    160 accessory gland, mated 4-day male    453 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    843 central nervous system, larvae L3    366 central nervous system, pupae P8    139 head, virgin 1-day female    203 head, virgin 4-day female    268 head, virgin 20-day female    678 head, mated 1-day female    163 head, mated 4-day female    207 head, mated 20-day female    506 head, mated 1-day male    201 head, mated 4-day male    137 head, mated 20-day male    283 salivary gland, larvae L3 wandering    226 salivary gland, white prepupae    616 digestive system, larvae L3 wandering    361 digestive system, 1-day adult    355 digestive system, 4-day adult    244 digestive system, 20-day adult    404 fat body, larvae L3 wandering    210 fat body, white prepupae    207 fat body, pupae P8    391 carcass, larvae L3 wandering    394 carcass, 1-day adult    194 carcass, 4-day adult    191 carcass, 20-day adult    359 ovary, virgin 4-day female    391 ovary, mated 4-day female    346 testis, mated 4-day male    160 accessory gland, mated 4-day male    453 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (843) central nervous system, larvae L3  (366) central nervous system, pupae P8  (139) head, virgin 1-day female  (203) head, virgin 4-day female  (268) head, virgin 20-day female  (678) head, mated 1-day female  (163) head, mated 4-day female  (207) head, mated 20-day female  (506) head, mated 1-day male  (201) head, mated 4-day male  (137) head, mated 20-day male  (283) salivary gland, larvae L3 wandering  (226) salivary gland, white prepupae  (616) digestive system, larvae L3 wandering  (361) digestive system, 1-day adult  (355) digestive system, 4-day adult  (244) digestive system, 20-day adult  (404) fat body, larvae L3 wandering  (210) fat body, white prepupae  (207) fat body, pupae P8  (391) carcass, larvae L3 wandering  (394) carcass, 1-day adult  (194) carcass, 4-day adult  (191) carcass, 20-day adult  (359) ovary, virgin 4-day female  (391) ovary, mated 4-day female  (346) testis, mated 4-day male  (160) accessory gland, mated 4-day male  (453) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (843) central nervous system, larvae L3  (366) central nervous system, pupae P8  139 head, virgin 1-day female  (203) head, virgin 4-day female  (268) head, virgin 20-day female  (678) head, mated 1-day female  (163) head, mated 4-day female  (207) head, mated 20-day female  (506) head, mated 1-day male  (201) head, mated 4-day male  137 head, mated 20-day male  (283) salivary gland, larvae L3 wandering  (226) salivary gland, white prepupae  (616) digestive system, larvae L3 wandering  (361) digestive system, 1-day adult  (355) digestive system, 4-day adult  (244) digestive system, 20-day adult  (404) fat body, larvae L3 wandering  (210) fat body, white prepupae  (207) fat body, pupae P8  (391) carcass, larvae L3 wandering  (394) carcass, 1-day adult  (194) carcass, 4-day adult  (191) carcass, 20-day adult  (359) ovary, virgin 4-day female  (391) ovary, mated 4-day female  (346) testis, mated 4-day male  (160) accessory gland, mated 4-day male  (453) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    843 central nervous system, larvae L3    366 central nervous system, pupae P8    139 head, virgin 1-day female    203 head, virgin 4-day female    268 head, virgin 20-day female    678 head, mated 1-day female    163 head, mated 4-day female    207 head, mated 20-day female    506 head, mated 1-day male    201 head, mated 4-day male    137 head, mated 20-day male    283 salivary gland, larvae L3 wandering    226 salivary gland, white prepupae    616 digestive system, larvae L3 wandering    361 digestive system, 1-day adult    355 digestive system, 4-day adult    244 digestive system, 20-day adult    404 fat body, larvae L3 wandering    210 fat body, white prepupae    207 fat body, pupae P8    391 carcass, larvae L3 wandering    394 carcass, 1-day adult    194 carcass, 4-day adult    191 carcass, 20-day adult    359 ovary, virgin 4-day female    391 ovary, mated 4-day female    346 testis, mated 4-day male    160 accessory gland, mated 4-day male    453 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of very high expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, in adult female stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    1031 embryo 02-04hr    1461 embryo 04-06hr    1256 embryo 06-08hr    1535 embryo 08-10hr    1596 embryo 10-12hr    2083 embryo 12-14hr    1016 embryo 14-16hr    1566 embryo 16-18hr    1175 embryo 18-20hr    1519 embryo 20-22hr    1356 embryo 22-24hr    979 larva L1    1635 larva L2    1280 larva L3 12hr old    1227 larva L3 puffstage 1-2    1016 larva L3 puffstage 3-6    1008 larva L3 puffstage 7-9    993 white prepupae new    805 white prepupae 12hr    693 white prepupae 24hr    670 pupae 2d postWPP    567 pupae 3d postWPP    473 pupae 4d postWPP    651 adult male 01day    428 adult male 05day    483 adult male 30day    557 adult female 01day    1164 adult female 05day    981 adult female 30day    1152 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (1031) embryo 02-04hr  (1461) embryo 04-06hr  (1256) embryo 06-08hr  (1535) embryo 08-10hr  (1596) embryo 10-12hr  (2083) embryo 12-14hr  (1016) embryo 14-16hr  (1566) embryo 16-18hr  (1175) embryo 18-20hr  (1519) embryo 20-22hr  (1356) embryo 22-24hr  (979) larva L1  (1635) larva L2  (1280) larva L3 12hr old  (1227) larva L3 puffstage 1-2  (1016) larva L3 puffstage 3-6  (1008) larva L3 puffstage 7-9  (993) white prepupae new  (805) white prepupae 12hr  (693) white prepupae 24hr  (670) pupae 2d postWPP  (567) pupae 3d postWPP  (473) pupae 4d postWPP  (651) adult male 01day  (428) adult male 05day  (483) adult male 30day  (557) adult female 01day  (1164) adult female 05day  (981) adult female 30day  (1152) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr  (1031) embryo 02-04hr  (1461) embryo 04-06hr  (1256) embryo 06-08hr  (1535) embryo 08-10hr  (1596) embryo 10-12hr  (2083) embryo 12-14hr  (1016) embryo 14-16hr  (1566) embryo 16-18hr  (1175) embryo 18-20hr  (1519) embryo 20-22hr  (1356) embryo 22-24hr  (979) larva L1  (1635) larva L2  (1280) larva L3 12hr old  (1227) larva L3 puffstage 1-2  (1016) larva L3 puffstage 3-6  (1008) larva L3 puffstage 7-9  (993) white prepupae new  (805) white prepupae 12hr  (693) white prepupae 24hr  (670) pupae 2d postWPP  (567) pupae 3d postWPP  (473) pupae 4d postWPP  (651) adult male 01day  (428) adult male 05day  (483) adult male 30day  (557) adult female 01day  (1164) adult female 05day  (981) adult female 30day  (1152) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1031 embryo 02-04hr    1461 embryo 04-06hr    1256 embryo 06-08hr    1535 embryo 08-10hr    1596 embryo 10-12hr    2083 embryo 12-14hr    1016 embryo 14-16hr    1566 embryo 16-18hr    1175 embryo 18-20hr    1519 embryo 20-22hr    1356 embryo 22-24hr    979 larva L1    1635 larva L2    1280 larva L3 12hr old    1227 larva L3 puffstage 1-2    1016 larva L3 puffstage 3-6    1008 larva L3 puffstage 7-9    993 white prepupae new    805 white prepupae 12hr    693 white prepupae 24hr    670 pupae 2d postWPP    567 pupae 3d postWPP    473 pupae 4d postWPP    651 adult male 01day    428 adult male 05day    483 adult male 30day    557 adult female 01day    1164 adult female 05day    981 adult female 30day    1152 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    1031 embryo 02-04hr    1461 embryo 04-06hr    1256 embryo 06-08hr    1535 embryo 08-10hr    1596 embryo 10-12hr    2083 embryo 12-14hr    1016 embryo 14-16hr    1566 embryo 16-18hr    1175 embryo 18-20hr    1519 embryo 20-22hr    1356 embryo 22-24hr    979 larva L1    1635 larva L2    1280 larva L3 12hr old    1227 larva L3 puffstage 1-2    1016 larva L3 puffstage 3-6    1008 larva L3 puffstage 7-9    993 white prepupae new    805 white prepupae 12hr    693 white prepupae 24hr    670 pupae 2d postWPP    567 pupae 3d postWPP    473 pupae 4d postWPP    651 adult male 01day    428 adult male 05day    483 adult male 30day    557 adult female 01day    1164 adult female 05day    981 adult female 30day    1152 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (1031) embryo 02-04hr  (1461) embryo 04-06hr  (1256) embryo 06-08hr  (1535) embryo 08-10hr  (1596) embryo 10-12hr  (2083) embryo 12-14hr  (1016) embryo 14-16hr  (1566) embryo 16-18hr  (1175) embryo 18-20hr  (1519) embryo 20-22hr  (1356) embryo 22-24hr  (979) larva L1  (1635) larva L2  (1280) larva L3 12hr old  (1227) larva L3 puffstage 1-2  (1016) larva L3 puffstage 3-6  (1008) larva L3 puffstage 7-9  (993) white prepupae new  (805) white prepupae 12hr  (693) white prepupae 24hr  (670) pupae 2d postWPP  (567) pupae 3d postWPP  (473) pupae 4d postWPP  (651) adult male 01day  (428) adult male 05day  (483) adult male 30day  (557) adult female 01day  (1164) adult female 05day  (981) adult female 30day  (1152) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr  (1031) embryo 02-04hr  (1461) embryo 04-06hr  (1256) embryo 06-08hr  (1535) embryo 08-10hr  (1596) embryo 10-12hr  (2083) embryo 12-14hr  (1016) embryo 14-16hr  (1566) embryo 16-18hr  (1175) embryo 18-20hr  (1519) embryo 20-22hr  (1356) embryo 22-24hr  (979) larva L1  (1635) larva L2  (1280) larva L3 12hr old  (1227) larva L3 puffstage 1-2  (1016) larva L3 puffstage 3-6  (1008) larva L3 puffstage 7-9  (993) white prepupae new  (805) white prepupae 12hr  (693) white prepupae 24hr  (670) pupae 2d postWPP  (567) pupae 3d postWPP  (473) pupae 4d postWPP  (651) adult male 01day  (428) adult male 05day  (483) adult male 30day  (557) adult female 01day  (1164) adult female 05day  (981) adult female 30day  (1152) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1031 embryo 02-04hr    1461 embryo 04-06hr    1256 embryo 06-08hr    1535 embryo 08-10hr    1596 embryo 10-12hr    2083 embryo 12-14hr    1016 embryo 14-16hr    1566 embryo 16-18hr    1175 embryo 18-20hr    1519 embryo 20-22hr    1356 embryo 22-24hr    979 larva L1    1635 larva L2    1280 larva L3 12hr old    1227 larva L3 puffstage 1-2    1016 larva L3 puffstage 3-6    1008 larva L3 puffstage 7-9    993 white prepupae new    805 white prepupae 12hr    693 white prepupae 24hr    670 pupae 2d postWPP    567 pupae 3d postWPP    473 pupae 4d postWPP    651 adult male 01day    428 adult male 05day    483 adult male 30day    557 adult female 01day    1164 adult female 05day    981 adult female 30day    1152 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    827 Schneider line 2 Sg4    1136 embryonic 1182-4H    1099 embryonic GM2    490 embryonic Kc167    559 embryonic S1    794 embryonic S3    650 leg disc CME L1    921 wing disc CME-W2    742 wing disc ML-DmD8    1322 wing disc ML-DmD9    1157 wing disc ML-DmD16-c3    609 wing disc ML-DmD21    2048 wing disc ML-DmD32    1005 haltere disc ML-DmD17-c3    506 eye-antennal disc ML-DmD11    1710 antennal disc ML-DmD20-c5    1314 mixed discs ML-DmD4-c1    734 CNS ML-DmBG1-c1    722 CNS ML-DmBG2-c2    845 tumorous blood cells mbn2    674 ovary fGS/OSS    385 ovary OSC    240 ovary OSS    52 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (827) Schneider line 2 Sg4  (1136) embryonic 1182-4H  (1099) embryonic GM2  (490) embryonic Kc167  (559) embryonic S1  (794) embryonic S3  (650) leg disc CME L1  (921) wing disc CME-W2  (742) wing disc ML-DmD8  (1322) wing disc ML-DmD9  (1157) wing disc ML-DmD16-c3  (609) wing disc ML-DmD21  (2048) wing disc ML-DmD32  (1005) haltere disc ML-DmD17-c3  (506) eye-antennal disc ML-DmD11  (1710) antennal disc ML-DmD20-c5  (1314) mixed discs ML-DmD4-c1  (734) CNS ML-DmBG1-c1  (722) CNS ML-DmBG2-c2  (845) tumorous blood cells mbn2  (674) ovary fGS/OSS  (385) ovary OSC  (240) ovary OSS  (52) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  (827) Schneider line 2 Sg4  (1136) embryonic 1182-4H  (1099) embryonic GM2  (490) embryonic Kc167  (559) embryonic S1  (794) embryonic S3  (650) leg disc CME L1  (921) wing disc CME-W2  (742) wing disc ML-DmD8  (1322) wing disc ML-DmD9  (1157) wing disc ML-DmD16-c3  (609) wing disc ML-DmD21  (2048) wing disc ML-DmD32  (1005) haltere disc ML-DmD17-c3  (506) eye-antennal disc ML-DmD11  (1710) antennal disc ML-DmD20-c5  (1314) mixed discs ML-DmD4-c1  (734) CNS ML-DmBG1-c1  (722) CNS ML-DmBG2-c2  (845) tumorous blood cells mbn2  (674) ovary fGS/OSS  (385) ovary OSC  (240) ovary OSS    52 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    827 Schneider line 2 Sg4    1136 embryonic 1182-4H    1099 embryonic GM2    490 embryonic Kc167    559 embryonic S1    794 embryonic S3    650 leg disc CME L1    921 wing disc CME-W2    742 wing disc ML-DmD8    1322 wing disc ML-DmD9    1157 wing disc ML-DmD16-c3    609 wing disc ML-DmD21    2048 wing disc ML-DmD32    1005 haltere disc ML-DmD17-c3    506 eye-antennal disc ML-DmD11    1710 antennal disc ML-DmD20-c5    1314 mixed discs ML-DmD4-c1    734 CNS ML-DmBG1-c1    722 CNS ML-DmBG2-c2    845 tumorous blood cells mbn2    674 ovary fGS/OSS    385 ovary OSC    240 ovary OSS    52 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    827 Schneider line 2 Sg4    1136 embryonic 1182-4H    1099 embryonic GM2    490 embryonic Kc167    559 embryonic S1    794 embryonic S3    650 leg disc CME L1    921 wing disc CME-W2    742 wing disc ML-DmD8    1322 wing disc ML-DmD9    1157 wing disc ML-DmD16-c3    609 wing disc ML-DmD21    2048 wing disc ML-DmD32    1005 haltere disc ML-DmD17-c3    506 eye-antennal disc ML-DmD11    1710 antennal disc ML-DmD20-c5    1314 mixed discs ML-DmD4-c1    734 CNS ML-DmBG1-c1    722 CNS ML-DmBG2-c2    845 tumorous blood cells mbn2    674 ovary fGS/OSS    385 ovary OSC    240 ovary OSS    52 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (827) Schneider line 2 Sg4  (1136) embryonic 1182-4H  (1099) embryonic GM2  (490) embryonic Kc167  (559) embryonic S1  (794) embryonic S3  (650) leg disc CME L1  (921) wing disc CME-W2  (742) wing disc ML-DmD8  (1322) wing disc ML-DmD9  (1157) wing disc ML-DmD16-c3  (609) wing disc ML-DmD21  (2048) wing disc ML-DmD32  (1005) haltere disc ML-DmD17-c3  (506) eye-antennal disc ML-DmD11  (1710) antennal disc ML-DmD20-c5  (1314) mixed discs ML-DmD4-c1  (734) CNS ML-DmBG1-c1  (722) CNS ML-DmBG2-c2  (845) tumorous blood cells mbn2  (674) ovary fGS/OSS  (385) ovary OSC  (240) ovary OSS  (52) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  (827) Schneider line 2 Sg4  (1136) embryonic 1182-4H  (1099) embryonic GM2  (490) embryonic Kc167  (559) embryonic S1  (794) embryonic S3  (650) leg disc CME L1  (921) wing disc CME-W2  (742) wing disc ML-DmD8  (1322) wing disc ML-DmD9  (1157) wing disc ML-DmD16-c3  (609) wing disc ML-DmD21  (2048) wing disc ML-DmD32  (1005) haltere disc ML-DmD17-c3  (506) eye-antennal disc ML-DmD11  (1710) antennal disc ML-DmD20-c5  (1314) mixed discs ML-DmD4-c1  (734) CNS ML-DmBG1-c1  (722) CNS ML-DmBG2-c2  (845) tumorous blood cells mbn2  (674) ovary fGS/OSS  (385) ovary OSC  (240) ovary OSS    52 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    827 Schneider line 2 Sg4    1136 embryonic 1182-4H    1099 embryonic GM2    490 embryonic Kc167    559 embryonic S1    794 embryonic S3    650 leg disc CME L1    921 wing disc CME-W2    742 wing disc ML-DmD8    1322 wing disc ML-DmD9    1157 wing disc ML-DmD16-c3    609 wing disc ML-DmD21    2048 wing disc ML-DmD32    1005 haltere disc ML-DmD17-c3    506 eye-antennal disc ML-DmD11    1710 antennal disc ML-DmD20-c5    1314 mixed discs ML-DmD4-c1    734 CNS ML-DmBG1-c1    722 CNS ML-DmBG2-c2    845 tumorous blood cells mbn2    674 ovary fGS/OSS    385 ovary OSC    240 ovary OSS    52 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    437 cold shock, 4-day adult    333 heat shock, 4-day adult    487 Cadmium 50 mM 6 hrs, larvae L3    741 Cadmium 50 mM 12 hrs, larvae L3    578 Cadmium 50 mM 48 hrs, 4-day adult    338 Cadmium 100 mM 48 hrs, 4-day adult    327 Copper 0.5 mM 12 hrs, larvae L3    397 Copper 15 mM 48 hrs, 4-day adult    48 Zinc 5 mM 12 hrs, larvae L3    301 Zinc 4.5 mM 48 hrs, 4-day adult    96 Ethanol 2.5% 3 hrs, larvae L3    760 Ethanol 5% 3 hrs, larvae L3    482 Ethanol 10% 3 hrs, larvae L3    721 Caffeine 1.5 mg/ml 4 hrs, larvae L3    532 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    443 Caffeine 25 mg/ml 48 hrs, 4-day adult    303 Paraquat 5 mM 48 hrs, 4-day adult    463 Paraquat 10 mM 48 hrs, 4-day adult    628 Rotenone 2 μg 12 hrs, larvae L3    632 Rotenone 8 μg 12 hrs, larvae L3    798 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  (437) cold shock, 4-day adult  (333) heat shock, 4-day adult  (487) Cadmium 50 mM 6 hrs, larvae L3  (741) Cadmium 50 mM 12 hrs, larvae L3  (578) Cadmium 50 mM 48 hrs, 4-day adult  (338) Cadmium 100 mM 48 hrs, 4-day adult  (327) Copper 0.5 mM 12 hrs, larvae L3  (397) Copper 15 mM 48 hrs, 4-day adult  (48) Zinc 5 mM 12 hrs, larvae L3  (301) Zinc 4.5 mM 48 hrs, 4-day adult  (96) Ethanol 2.5% 3 hrs, larvae L3  (760) Ethanol 5% 3 hrs, larvae L3  (482) Ethanol 10% 3 hrs, larvae L3  (721) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (532) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (443) Caffeine 25 mg/ml 48 hrs, 4-day adult  (303) Paraquat 5 mM 48 hrs, 4-day adult  (463) Paraquat 10 mM 48 hrs, 4-day adult  (628) Rotenone 2 μg 12 hrs, larvae L3  (632) Rotenone 8 μg 12 hrs, larvae L3  (798) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult  (437) cold shock, 4-day adult  (333) heat shock, 4-day adult  (487) Cadmium 50 mM 6 hrs, larvae L3  (741) Cadmium 50 mM 12 hrs, larvae L3  (578) Cadmium 50 mM 48 hrs, 4-day adult  (338) Cadmium 100 mM 48 hrs, 4-day adult  (327) Copper 0.5 mM 12 hrs, larvae L3  (397) Copper 15 mM 48 hrs, 4-day adult    48 Zinc 5 mM 12 hrs, larvae L3  (301) Zinc 4.5 mM 48 hrs, 4-day adult    96 Ethanol 2.5% 3 hrs, larvae L3  (760) Ethanol 5% 3 hrs, larvae L3  (482) Ethanol 10% 3 hrs, larvae L3  (721) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (532) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (443) Caffeine 25 mg/ml 48 hrs, 4-day adult  (303) Paraquat 5 mM 48 hrs, 4-day adult  (463) Paraquat 10 mM 48 hrs, 4-day adult  (628) Rotenone 2 μg 12 hrs, larvae L3  (632) Rotenone 8 μg 12 hrs, larvae L3  (798) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    437 cold shock, 4-day adult    333 heat shock, 4-day adult    487 Cadmium 50 mM 6 hrs, larvae L3    741 Cadmium 50 mM 12 hrs, larvae L3    578 Cadmium 50 mM 48 hrs, 4-day adult    338 Cadmium 100 mM 48 hrs, 4-day adult    327 Copper 0.5 mM 12 hrs, larvae L3    397 Copper 15 mM 48 hrs, 4-day adult    48 Zinc 5 mM 12 hrs, larvae L3    301 Zinc 4.5 mM 48 hrs, 4-day adult    96 Ethanol 2.5% 3 hrs, larvae L3    760 Ethanol 5% 3 hrs, larvae L3    482 Ethanol 10% 3 hrs, larvae L3    721 Caffeine 1.5 mg/ml 4 hrs, larvae L3    532 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    443 Caffeine 25 mg/ml 48 hrs, 4-day adult    303 Paraquat 5 mM 48 hrs, 4-day adult    463 Paraquat 10 mM 48 hrs, 4-day adult    628 Rotenone 2 μg 12 hrs, larvae L3    632 Rotenone 8 μg 12 hrs, larvae L3    798 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    437 cold shock, 4-day adult    333 heat shock, 4-day adult    487 Cadmium 50 mM 6 hrs, larvae L3    741 Cadmium 50 mM 12 hrs, larvae L3    578 Cadmium 50 mM 48 hrs, 4-day adult    338 Cadmium 100 mM 48 hrs, 4-day adult    327 Copper 0.5 mM 12 hrs, larvae L3    397 Copper 15 mM 48 hrs, 4-day adult    48 Zinc 5 mM 12 hrs, larvae L3    301 Zinc 4.5 mM 48 hrs, 4-day adult    96 Ethanol 2.5% 3 hrs, larvae L3    760 Ethanol 5% 3 hrs, larvae L3    482 Ethanol 10% 3 hrs, larvae L3    721 Caffeine 1.5 mg/ml 4 hrs, larvae L3    532 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    443 Caffeine 25 mg/ml 48 hrs, 4-day adult    303 Paraquat 5 mM 48 hrs, 4-day adult    463 Paraquat 10 mM 48 hrs, 4-day adult    628 Rotenone 2 μg 12 hrs, larvae L3    632 Rotenone 8 μg 12 hrs, larvae L3    798 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  (437) cold shock, 4-day adult  (333) heat shock, 4-day adult  (487) Cadmium 50 mM 6 hrs, larvae L3  (741) Cadmium 50 mM 12 hrs, larvae L3  (578) Cadmium 50 mM 48 hrs, 4-day adult  (338) Cadmium 100 mM 48 hrs, 4-day adult  (327) Copper 0.5 mM 12 hrs, larvae L3  (397) Copper 15 mM 48 hrs, 4-day adult  (48) Zinc 5 mM 12 hrs, larvae L3  (301) Zinc 4.5 mM 48 hrs, 4-day adult  (96) Ethanol 2.5% 3 hrs, larvae L3  (760) Ethanol 5% 3 hrs, larvae L3  (482) Ethanol 10% 3 hrs, larvae L3  (721) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (532) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (443) Caffeine 25 mg/ml 48 hrs, 4-day adult  (303) Paraquat 5 mM 48 hrs, 4-day adult  (463) Paraquat 10 mM 48 hrs, 4-day adult  (628) Rotenone 2 μg 12 hrs, larvae L3  (632) Rotenone 8 μg 12 hrs, larvae L3  (798) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult  (437) cold shock, 4-day adult  (333) heat shock, 4-day adult  (487) Cadmium 50 mM 6 hrs, larvae L3  (741) Cadmium 50 mM 12 hrs, larvae L3  (578) Cadmium 50 mM 48 hrs, 4-day adult  (338) Cadmium 100 mM 48 hrs, 4-day adult  (327) Copper 0.5 mM 12 hrs, larvae L3  (397) Copper 15 mM 48 hrs, 4-day adult    48 Zinc 5 mM 12 hrs, larvae L3  (301) Zinc 4.5 mM 48 hrs, 4-day adult    96 Ethanol 2.5% 3 hrs, larvae L3  (760) Ethanol 5% 3 hrs, larvae L3  (482) Ethanol 10% 3 hrs, larvae L3  (721) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (532) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (443) Caffeine 25 mg/ml 48 hrs, 4-day adult  (303) Paraquat 5 mM 48 hrs, 4-day adult  (463) Paraquat 10 mM 48 hrs, 4-day adult  (628) Rotenone 2 μg 12 hrs, larvae L3  (632) Rotenone 8 μg 12 hrs, larvae L3  (798) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    437 cold shock, 4-day adult    333 heat shock, 4-day adult    487 Cadmium 50 mM 6 hrs, larvae L3    741 Cadmium 50 mM 12 hrs, larvae L3    578 Cadmium 50 mM 48 hrs, 4-day adult    338 Cadmium 100 mM 48 hrs, 4-day adult    327 Copper 0.5 mM 12 hrs, larvae L3    397 Copper 15 mM 48 hrs, 4-day adult    48 Zinc 5 mM 12 hrs, larvae L3    301 Zinc 4.5 mM 48 hrs, 4-day adult    96 Ethanol 2.5% 3 hrs, larvae L3    760 Ethanol 5% 3 hrs, larvae L3    482 Ethanol 10% 3 hrs, larvae L3    721 Caffeine 1.5 mg/ml 4 hrs, larvae L3    532 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    443 Caffeine 25 mg/ml 48 hrs, 4-day adult    303 Paraquat 5 mM 48 hrs, 4-day adult    463 Paraquat 10 mM 48 hrs, 4-day adult    628 Rotenone 2 μg 12 hrs, larvae L3    632 Rotenone 8 μg 12 hrs, larvae L3    798 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_22 mE1_20_mRNA_expression_cluster_01
External Data & Images
Linkouts	BDGP expression data • GM26647 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0010412
Alleles & Phenotypes
Summary of Allele Phenotypes
Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of RpS19a Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of RpS19a Class Mutagen Stocks Known lesion RpS19aGL00730 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes RpS19aKK107846 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes RpS19aGD11326 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(1)FDD-0331226 (Cook and Levis, 2009.12.21)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD11326} NA P{KK107846} NA P{TRiP.GL00730} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{SUPor-P}KG03235 NA
Gene Ontology: Function, Process & Cellular Component ( 4 unique terms )
Terms Based on Experimental Evidence ( 2 terms )
Molecular Function
CV term Evidence References
structural constituent of ribosome inferred from direct assay (Alonso and Santaren, 2006)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
ribosome inferred from direct assay (Alonso and Santaren, 2006)
Terms Based on Predictions or Assertions ( 4 terms )
Molecular Function
CV term Evidence References
structural constituent of ribosome inferred from sequence or structural similarity with UniProtKB:P17074 (FlyBase, 1992-) non-traceable author statement (Baumgartner, 1993.6.3, Swiss-Prot Project Members, 1995.2.1)
Biological Process
CV term Evidence References
translation inferred from sequence or structural similarity with UniProtKB:P17074 (FlyBase, 1992-) non-traceable author statement (Baumgartner, 1993.6.3)
Cellular Component
CV term Evidence References
cytosolic small ribosomal subunit inferred from sequence or structural similarity with UniProtKB:P17074 (FlyBase, 1992-) non-traceable author statement (Baumgartner, 1993.6.3) ribosome non-traceable author statement (Swiss-Prot Project Members, 1995.2.1)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
RpS19a - 5-HT7 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Aats-his anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Aats-met anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Arl1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Arp1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Art2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - B-H1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - BubR1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG10103 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG10417 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG10681 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG1092 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG10934 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG1105 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG11534 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG11679 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG11876 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG12057 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG1246 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG12818 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG13630 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG13631 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG14024 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG14074 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG1421 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG14507 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG14556 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG14667 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG14969 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG15236 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG16941 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG17029 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG1764 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG1785 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG17985 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG2064 experimental knowledge based (Guruharsha et al., 2011) RpS19a - CG2070 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG2183 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG2469 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG30184 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG30487 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG31051 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG3119 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG31522 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG31910 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG32698 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG32812 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG33514 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG3570 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG3706 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG3919 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG4091 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG4415 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG4586 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG4707 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG4815 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG5027 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG5087 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG5506 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG5805 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG5946 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG5961 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG6073 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG6227 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG6321 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG6674 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG6927 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG7137 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG7272 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG7878 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG7881 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG8735 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG8745 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG8939 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG9389 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CG9634 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CSN4 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CTCF anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CTPsyn anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Clc anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - CrebA anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Cyp9b2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - DNApol-ι anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Df31 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Dip1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Drep-1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Eap anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Ent2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Ets96B anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Ext2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Gad1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Hakai anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Hip1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Hsf anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Jon65Ai anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Lst8 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - MSBP anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Mob4 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Nle anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - PH4αSG1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - PHGPx anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Pebp1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Pex16 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Pk17E anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Pka-R1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Pp2B-14D anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Pten anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Rab10 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - RagC-D anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Ran anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Ras85D anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Rcd-1r anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Rcd6 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - RhoGDI anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - RluA-1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - RpS10b experimental knowledge based (Guruharsha et al., 2011) RpS19a - RpS21 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Rpb4 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Rpt6 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Snap anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Stat92E anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Tg anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Vap-33-1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - Wsck anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - ap anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - az2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - boca experimental knowledge based (Guruharsha et al., 2011) RpS19a - bru-3 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - capu anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - cv anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - eIF-2α anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - fd102C anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - frc anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - grau anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - h anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - igl anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - kay anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - kuk anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - lack anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - mts anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - nclb anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - nemy anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - phl anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - stas anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - tan anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - ttv anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - tyn anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - vret anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - wds anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - wibg anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19a - wls anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions RpS19a allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0010412 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 32635
Orthologs
OrthoDB Orthologs (57) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6X6CVT Dipteran inclusive ortholog search EOG612MFQ Insect inclusive ortholog search EOG6X3FXQ Arthropod inclusive ortholog search EOG695X84 Metazoa inclusive ortholog search EOG6HB9F9
Orthologs in Drosophila Species (EOG6X6CVT)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\RpS19a     Drosophila simulans   Dsim\GD17290 Y   Drosophila sechellia   Dsec\GM13451 Y   Drosophila erecta   Dere\GG19061 Y   Drosophila yakuba   Dyak\RpS19a Y   Drosophila ananassae   Dana\GF21022 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA27710     Drosophila pseudoobscura pseudoobscura   Dpse\GA18203     Drosophila persimilis   Dper\GL27068     Drosophila persimilis   Dper\GL18204 Y   Drosophila willistoni   Dwil\GK25712 Y   Drosophila virilis   Dvir\GJ15624 Y   Drosophila mojavensis   Dmoj\GI11025 Y   Drosophila grimshawi   Dgri\GH12611 Y
Orthologs in non-Drosophila Dipterans (EOG612MFQ)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL010756 Y Anopheles gambiae Malaria mosquito  Agam\AGAP010933 Y Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ004482 Y
Orthologs in non-Dipteran Insects (EOG6X3FXQ)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\LOC410024 Y Apis mellifera Western honey bee  Amel\LOC410024 Y Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG002462 Y Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH10806 Y Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH17664 Y Atta cephalotes Leafcutter ant  Acep\ACEP10372 Y Atta cephalotes Leafcutter ant  Acep\ACEP13496 Y Camponotus floridanus Florida carpenter ant  Cflo\CFLO15219 Y Camponotus floridanus Florida carpenter ant  Cflo\CFLO21954 Y Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL12873 Y Linepithema humile Argentine ant  Lhum\LH22469 Y Pogonomyrmex barbatus Red harvester ant  Pbar\PB20534 Y Pogonomyrmex barbatus Red harvester ant  Pbar\PB20539 Y Solenopsis invicta Red fire ant  Sinv\SINV19713 Y Acyrthosiphon pisum Pea aphid  Apim\ACYPI001643 Y Pediculus humanus Human body louse  Phum\PHUM569580 Y Tribolium castaneum Red flour beetle  Tcas\GLEAN_07818-OG22665 Y
Orthologs in non-Insect Arthropods (EOG695X84)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\JGI_V11_231884 Y Ixodes scapularis Deer tick  Isca\ISCW020743 Y
Orthologs in non-Arthropod Metazoa (EOG6HB9F9)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\rps-19 Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_006487gn Y Danio rerio Zebrafish  Drer\rps19 Y Xenopus tropicalis Western clawed frog  Xtro\rps19 Y Mus musculus House mouse  Mmus\Rps19 Y Mus musculus House mouse  Mmus\Rps19-ps1 Y Mus musculus House mouse  Mmus\Rps19-ps13 Y Mus musculus House mouse  Mmus\Rps19-ps4 Y Mus musculus House mouse  Mmus\Rps19-ps1 Y Rattus norvegicus Norway rat  Rnor\ENSRNOG00000013292 Y Rattus norvegicus Norway rat  Rnor\LOC100362339 Y Rattus norvegicus Norway rat  Rnor\ENSRNOG00000003303 Y Rattus norvegicus Norway rat  Rnor\LOC688899 Y Rattus norvegicus Norway rat  Rnor\ENSRNOG00000005430 Y Rattus norvegicus Norway rat  Rnor\RGD1559724 Y Rattus norvegicus Norway rat  Rnor\LOC100361732 Y Rattus norvegicus Norway rat  Rnor\LOC100360843 Y Rattus norvegicus Norway rat  Rnor\Rps19 Y Rattus norvegicus Norway rat  Rnor\RGD1562153 Y Rattus norvegicus Norway rat  Rnor\ENSRNOG00000033146 Y Homo sapiens Human  Hsap\RPS19 Y
Human Orthologs (1)
Gene OMIM HGNC Hsap\RPS19
AAA Orthologs (10) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD17290 Drosophila sechellia Dsec\GM13451 Drosophila erecta Dere\GG19061 Drosophila yakuba Dyak\RpS19a Drosophila ananassae Dana\GF21022 Drosophila persimilis Dper\GL18204 Drosophila willistoni Dwil\GK25712 Drosophila virilis Dvir\GJ15624 Drosophila mojavensis Dmoj\GI11025 Drosophila grimshawi Dgri\GH12611
Stocks & Reagents
Stocks Listed in FlyBase ( 2 )
Bloomington	42774 y1 v1; P{TRiP.GL00730}attP2
VDRC	v107188 P{KK107846}VIE-260B
Genomic Clones ( 2 )
	BACR18G21 BACR29G15 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 277 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GM26647
Other clones	IP20096 yak-ad_RpS19 yak-em_RpS19
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH02733 GH02934 GH05948 GH07190 GH08725 GH08727 GH09506 GH11728 GH14365 GH15329 GH18156 GH22442 GH24352 GM03722 GM09219 GM12914 GM13571 GM14020 GM15230 GM16010 GM16240 GM16669 GM18738 GM23029 GM28101 GM29105 GM29425 GM32693 LD36746 LD37495 LP01920 LP02654 LP05884 LP08294 LP09664 LP15504 LP15734 LP19427 LP23546 RE02150 RE04655 RE07487 RE07919 RE12080 RE17062 RE20860 RE25601 RE25615 RE28362 RE31478 RE31607 RE31831 RE33817 RE35107 RE36077 RE40240 RE40624 RE41102 RE42215 RE42709 RE42911 RE45817 RE46636 RE53143 RE53357 RE55376 RE55665 RE60779 RE60863 RE61733 RE61982 RE70375 RE75125 RH02254 RH03341 RH03836 RH04652 RH04973 RH05180 RH05733 RH06954 RH07369 RH08735 RH21606 RH21724 RH25024 RH26807 RH26975 RH31245 RH32241 RH32609 RH33123 RH33742 RH33808 RH33813 RH33984 RH34070 RH37964 RH38019 RH40692 RH42007 RH44227 RH45066 RH46302 RH46432 RH47908 RH48525 RH49737 RH50316 RH54101 RH59270 RH59962 RH60305 RH60861 RH64443 RH66455 RH66733 SD01203 SD08617 SD11390 SD11773 SD14157 SD16280 SD17219 SD18606 SD18625 SD19693 SD23555 SD24021 SD25527 SD26129 SD27737
Other clones	103215 109230 283030 283210 473568 473611 522957 523056 523103 523104 523384 524122 524141 524393 524950 525744 527085 527198 528077 528181 528258 542551 556895 558095 569757 569770 569835 569899 bs02c11 Dmel_dig_000798_0679_0361 Dmel_dig_005940_0661_1680 Dmel_dig_007128_0607_2623 Dmel_dig_008051_0719_1089 Dmel_dig_010946_0713_0840 Dmel_dig_011823_0649_3320 Dmel_dig_012394_0595_0682 Dmel_dig_013014_0638_0414 Dmel_dig_015529_0597_0398 Dmel_dig_018287_0583_3054 Dmel_dig_018869_0711_3178 Dmel_neb_001810_0429_3735 Dmel_neb_005683_0887_0594 Dmel_neb_007164_0872_1914 Dmel_neb_008738_0855_0965 Dmel_neb_009193_0835_0420 Dmel_neb_009640_0580_1778 Dmel_neb_009943_0854_1354 Dmel_neb_011060_0630_0474 Dmel_neb_011478_0834_1421 Dmel_neb_011565_0953_1177 Dmel_neb_011591_0823_2176 Dmel_neb_012667_0826_2753 Dmel_neb_013564_0835_2116 Dmel_neb_014338_0073_2417 Dmel_neb_014495_0677_1690 Dmel_neb_015295_0928_2644 Dmel_neb_015525_0834_1618 EC13419 EC27553 EC28214 EC32520 EC33638 EK135915 EK139832 EK155753 EK165206 EK235825 EK264040 EK308659 EN00244 EN00339 EN03126 EN03327 EN03426 EN03829 EN04816 EN04837 EN05316 EN07043 EN07201 EN07240 EN07443 EN07806 EN08459 EN09012 EN09335 EN10834 EN11638 EN12001 EN12959 EN15539 EN15556 EN15718 EN15836 ESG011c.E7_B12 ESG011c.E7_H04 ESG011c.E21_B12 ESG011c.E21_H04 ESG018a.E21_A11 ESG0119c.B21_F10 FGC030A12 FGM001F08 FGM209A11 GH02771 GH05969 GH14192 GH24437 IP09263 IP09781 IP11629 IP13192 IP17409 LD10848 LD17143 LP09550 LP19660 RH27927 RH31090 RH37243 RP004098899 RP004126867 RP004135922 RP004150679 RP004155211 RP004195739 RP004198278 RP004214527 RP004235442 RP004236584 RP004236587 RP004242356 RP004319641 RP004365249 RP004379685 RP004389944 RP004435346 RP004454336 RP004481123 RP004484766 RP004557916 UUGC0402
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0010412 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 32635
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: RpS19 BcDNA:GM26647 (FlyBase, 1996-)
Additional comments	"RpS19a" likely corresponds to "M(1)14E". (Marygold et al., 2007) Source for merge of RpS19 BcDNA:GM26647 was a shared cDNA (date:030728). (FlyBase, 1996-)
Other Comments
	Haploinsufficient locus. (Cook et al., 2012) Likely Minute gene. (Marygold et al., 2007) Deletions removing RpS19a but no other cytoplasmic ribosomal protein-encoding genes show Minute phenotypes. (Marygold et al., 2007) RNAi generated by PCR using primers directed to this gene causes a cell growth and viability phenotype when assayed in Kc167 and S2R+ cells. (Boutros et al., 2004) Expression of transcript changes with adult age. (Shikama and Brack, 1996) An RpS19a cDNA has been cloned and sequenced. (Baumgartner et al., 1993)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_078652 NM_167526 NM_167527 RefSeq (Proteins) • NP_523376 NP_727992 NP_727993 DDBJ / EMBL / GenBank • AAF48633 AAF65682 AAM50728 AAN09412 AAN09413 AF216206 AI109507 AI944588 AY118868 BI354164 CAA51677 X73153 Entrez Gene - A searchable database of RefSeq genes. • 32635 UniProtKB/Swiss-Prot • P39018 UniProtKB/TrEMBL • E2QD65
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Ribosomal protein S19e, conserved site (IPR018277) Ribosomal protein S19e (IPR001266) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • GM26647
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0010412 DRSC - Results from RNAi screens. • FBgn0010412 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0010412 FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0010412 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 32635 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 32635 modMine - Data generated by the modENCODE project. • FBgn0010412
Synonyms & Secondary IDs ( 10 )
Reported As
Symbol Synonym	BcDNA:GM26647   CG4464 (Kai et al., 2005, Bolshakov et al., 2002, Cermelli et al., 2006, Marygold et al., 2007, Keleman et al., 2009.8.5, Ni et al., 2010.12.1) RpS19 (Boutros et al., 2004, Winter et al., 2001, Cermelli et al., 2006, McDermott et al., 2012, Nie et al., 2009) RpS19a (Shigenobu et al., 2006, Kopp, 2009.5.20, Marygold et al., 2007, Cook and Levis, 2009.12.21, Cook et al., 2012) Rp S19a (Alonso and Santaren, 2006) S19 (Baumgartner et al., 1993) S19a (Carpenter et al., 2009)
Name Synonym	ribosomal protein S19 (Baumgartner, 1993.6.3) Ribosomal protein S19 (Ahrens et al., 2007) Ribosomal protein S19a (Ashburner and Marygold, 2004.7.2)
Secondary FlyBase IDs
	FBgn0063184
References ( 38 )
Generate a list of	All references relating to this gene ( 38 )
List References by type	Research paper  ( 14 ) Supplementary material  ( 7 ) Review  ( 1 ) Personal communication to FlyBase  ( 9 ) FlyBase analysis  ( 2 ) DNA/RNA sequence record  ( 2 ) Protein sequence record  ( 1 ) Curated genome annotation  ( 2 )
Recent research papers ( 3 )
	Cook et al., 2012, Genome Biol. 13(3): R21 The generation of chromosomal deletions to provide extensive coverage and subdivision of the Drosophila melanogaster genome. [FBrf0219066] McDermott et al., 2012, Biol. Open 1(5): 488--497 Drosophila Syncrip binds the gurken mRNA localisation signal and regulates localised transcripts during axis specification. [FBrf0218722] Booker et al., 2011, BMC Genomics 12: 50 False negative rates in Drosophila cell-based RNAi screens: a case study. [FBrf0212969] Show all research papers ...
Recent reviews (0)
	All reviews listed in FlyBase were published before 2011 Show reviews ...