Gene Dmel\Gp150
| General Information | |||
|---|---|---|---|
| Symbol | Dmel\Gp150 | Species | D. melanogaster |
| Name | Gp150 | Annotation symbol | CG5820 |
| Feature type | protein_coding_gene | FlyBase ID | FBgn0013272 |
| Created / Updated | 2003-12-01/2003-12-01 | ||
| Genomic Location | |||
| Chromosome (arm) | 2R | Recombination map | 2- |
| Cytogenetic map | 58D3-58D3 | Sequence location | 2R:18,205,167..18,216,933 [+] |
| Map ( GBrowse ) |
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Summary Information
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Automatically generated summary
See sections below for more information | This gene is referred to in FlyBase by the symbol Gp150 (CG5820, FBgn0013272). It has the cytological map location 58D3. Its sequence location is 2R:18205167..18216933. Its molecular function is described as: ATP binding; catalytic activity; protein binding. It is involved in the biological processes: transmembrane receptor protein tyrosine phosphatase signaling pathway; compound eye development; metabolic process. 25 alleles are reported. The phenotypes of these alleles are annotated with 11 unique terms, many of which group under: peripheral nervous system; nervous system; organ system; adult; adult segment; adult mesothoracic segment; thoracic segment; sense organ; eye; anterior scutellar bristle. It has 4 annotated transcripts and 4 annotated polypeptides. | ||
Detailed Mapping Data
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| FlyBase Computed Cytological Location | |||
Cytogenetic map Evidence for location 58D3-58D3
Limits computationally determined from genome sequence between P{PZ}ari-207768 and P{lacW}l(2)k09801k09801
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| Experimentally Determined Cytological Location | |||
Cytogenetic map Notes References 58D1-58D3 58D1-58D8 | |||
| Experimentally Determined Recombination Data | |||
| Location | |||
| Left of (cM) | |||
| Right of (cM) | |||
| Notes | |||
| Molecular Map Data | |||
Gene Order (in direction of increasing cytology)
References Gene Order (overall orientation not stated) References Overall orientation not stated: Gp150+ pgc+ T3dh- pgc+ Overall orientation not stated: Gp150+ T3dh- | |||
Gene Model & Products
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Please see the
GBrowse view of
Dmel\Gp150
for information on other features
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| Comments on Gene Model | |||
Transcript Data
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| Annotated Transcripts | |||
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) | |||
| Additional Transcript Data & Comments | |||
| Reported size (kB) | 4.5 (northern blot) | ||
| Comments | |||
| External Data | |||
| Crossreferences | |||
Polypeptide Data
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| Annotated Polypeptides | |||
Name FlyBase ID
Predicted MW (kD)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
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| Additional Polypeptide Data & Comments | |||
| Reported size (kD) | 1051 (aa); 150 (kD observed); 115 (kD predicted) | ||
| Comments | |||
| External Data | |||
| Linkouts | PANTHER
- Protein classification by function, families, and pathways
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| Crossreferences | InterPro
domains - A database of protein families, domains, and functional sites
• Leucine-rich repeat (IPR001611)
Leucine-rich repeat, typical subtype (IPR003591)
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Sequences Consistent with the Gene Model
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| DDBJ
/
EMBL / GenBank | DNA sequence Protein sequence Name | ||
| UniProtKB/Swiss-Prot | |||
| UniProtKB/TrEMBL | |||
| Maps to | |||
| Does NOT map to | |||
| Identified with | |||
Mapped Features & Mutations
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Please see
GBrowse
or insertion reports for information on insertions of transgenic
constructs and features not listed here
Type Symbol & Location Additional Notes References deletion Gp150[k11107b] 2R:18,214,669..18,215,973 comment=A 1305bp deletion from exon 5 into exon 6. The deletion extends from amino acid 620 to 1040 and is followed by a frameshift and translation termination a few residues later. evidence=experimental point mutation Gp150[4] 2R:18,212,979..18,212,980 comment=G to A nucleotide change at the second or third position of the Trp codon leads to a nonsense mutation (exact site of mutation unspecified). evidence=experimental pr_change=W119|Gp150-PD,W94|Gp150-PB,W94|Gp150-PC, W94 |Gp150-PA reported_na_change=G?A reported_pr_change=W94@ transposable element target site duplication P{lacW}Gp150[P8] 2R:18,205,512..18,205,519 comment=Position of 8bp P element repeat based on author statement that insertion maps 53bp into the 2nd intron of Gp150. evidence=experimental transposable element target site duplication P{GawB}Gp150[52A] 2R:18,205,629..18,205,636 comment=Location of 8bp P element repeat based on author statement that insertion maps 170bp into the 2nd intron of Gp150. evidence=experimental | |||
External Data
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| Linkouts | DEDB
- Drosophila exon database: splicing graphs
• | ||
| Crossreferences | |||
Expression Data
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| FlyBase-Curated Data | |||
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Transcript and Protein data | Please see the FlyBase Gene Expression Report for details of gene expression from the literature. | ||
Summary of Transcript Expression
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Stage Tissue/Position
Reference
embryonic stage
embryonic stage
embryonic stage | stage 3-12
embryonic stage | stage 10-12
ventral midline | |||
| Marker for | |||
| Subcellular Localization | |||
| CV Term | |||
Summary of Polypeptide Expression
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Stage Tissue/Position
Reference
larval stage
eye disc | |||
| Marker for | |||
| Subcellular Localization | |||
| CV Term | plasma membrane | ||
External Data & Images
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| Linkouts | FLIGHT
- Cell culture data for RNAi and other high-throughput technologies
FlyAtlas
- Adult expression by tissue, using Affymetrix Dros2 array
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