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Gene Dmel\Pex1

General Information
Symbol	Dmel\Pex1	Species	D. melanogaster
Name	Peroxin 1	Annotation symbol	CG6760
Feature type	protein_coding_gene	FlyBase ID	FBgn0013563
Gene Model Status	Current	Stock availability	4 publicly available
Also Known As	l(3)70Da, l(3)s4868
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	70D1-70D2	Sequence location	3L:14,064,992..14,069,223 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Peroxin 1 is referred to in FlyBase by the symbol Dmel\Pex1 (CG6760, FBgn0013563). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: ATPase activity, coupled. There is experimental evidence that it is involved in the biological process: central nervous system development; glial cell development; peroxisome organization; spermatocyte division; peripheral nervous system development. 9 alleles are reported. The phenotypes of these alleles are annotated with: spermatid; testis. It has one annotated transcript and one annotated polypeptide. Protein features are: AAA+ ATPase domain; ATPase, AAA-type, conserved site; ATPase, AAA-type, core; Aspartate decarboxylase-like domain; Peroxisome biogenesis factor 1; Peroxisome biogenesis factor 1, N-terminal. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages, during late pupal stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult Malpighian tubules. Comments on Affy2 ProbeSet: ProbeSet 1632434_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of l(3)70Da. Gene sequence location is 3L:14064992..14069223.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 70D1-70D2   Limits computationally determined from genome sequence between P{EP}EP3561EP3561 and P{PZ}l(3)70Da02402&P{PZ}btl00208
Experimentally Determined Cytological Location
Cytogenetic map Notes References 70D1-70D1   (determined by in situ hybridisation)   (Burmester et al., 2000) 70D1-70D1     (Mink, 1999.2.5) 70D1-70D1     (Mink, 1999.2.5) 70C1-70C2   (determined by in situ hybridisation) 70D1--2 (determined by in situ hybridisation)   (Spradling et al., 1999) 70D1-70D2   (determined by in situ hybridisation)   (Szeged Stock Center, 1998-) 70D1-70D2   (determined by in situ hybridisation)   (Deak et al., 1997) 70C1-70C2   70D1--2   (BDGP Project Members, 1994-1999)
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Pex1 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.46 Low-frequency RNA-Seq exon junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Pex1-RA FBtr0075777  NM_143759   3275   1006
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Pex1-PA   FBpp0075519   113.9   1006   7.60     NP_652016   AAF49760
Additional Polypeptide Data & Comments
Reported size (kDa)	1006 (aa); 114 (kD predicted) (Burmester et al., 2000)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Peroxisome biogenesis factor 1 (IPR025653) AAA+ ATPase domain (IPR003593) ATPase, AAA-type, core (IPR003959) ATPase, AAA-type, conserved site (IPR003960) Aspartate decarboxylase-like domain (IPR009010) Peroxisome biogenesis factor 1, N-terminal (IPR015342) P-loop containing nucleoside triphosphate hydrolase (IPR027417)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014296 AAF49760   AI512050   AJ132810   AJ132814   AJ132815   AJ132816   AJ243811 CAB51031   AQ026396   AQ034052   AW943675   AX260134   AX260136   AX260137   AX260138   AX260139   AX260140   AY075423 AAL68239   CK661779   GH960187   GH963279   GH981864
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VUC7 Q9Y090
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 7 -- 8   posterior endoderm   (Fisher et al., 2012) embryonic stage 9 -- 10   anterior endoderm   (Fisher et al., 2012) posterior endoderm   (Fisher et al., 2012) embryonic stage 11 -- 12   anterior midgut primordium   (Fisher et al., 2012) posterior midgut primordium   (Fisher et al., 2012) tracheal primordium   (Fisher et al., 2012) embryonic stage 13 -- 16   embryonic/larval midgut   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
mass spectroscopy Stage Tissue/Position (including subcellular localization) Reference day 5 of adulthood & male -- day 7 of adulthood & male   spermatozoon   (Wasbrough et al., 2010)
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult Malpighian tubules. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    35.25 Larval Midgut    68.9 Larval Hindgut    43.5 Larval Malpighian Tubules    77.9 Larval Fat Body    94.8 Larval Salivary Gland    40.4 Larval Trachea    35.075 Larval Carcass    46.875 Adult Head    32.8 Adult Eye    21.65 Adult Brain    28.8 Adult Thoracic-Abdominal Ganglion    33.2 Adult Crop    59 Adult Midgut    71.1 Adult Hindgut    38.2 Adult Malpighian Tubules    117.2 Adult Fat Body    89.2 Adult Salivary Gland    57.4 Adult Heart    54.2 Adult VirginFemale Spermatheca    54.5 Adult InseminatedFemale Spermatheca    55.4 Adult Ovary    73.8 Adult Testis    34.4 Adult Male Accessory Gland    24.5 Adult Carcass    51.6 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    35.25 Larval Midgut    68.9 Larval Hindgut    43.5 Larval Malpighian Tubules    77.9 Larval Fat Body    94.8 Larval Salivary Gland    40.4 Larval Trachea    35.075 Larval Carcass    46.875 Adult Head    32.8 Adult Eye    21.65 Adult Brain    28.8 Adult Thoracic-Abdominal Ganglion    33.2 Adult Crop    59 Adult Midgut    71.1 Adult Hindgut    38.2 Adult Malpighian Tubules    117.2 Adult Fat Body    89.2 Adult Salivary Gland    57.4 Adult Heart    54.2 Adult VirginFemale Spermatheca    54.5 Adult InseminatedFemale Spermatheca    55.4 Adult Ovary    73.8 Adult Testis    34.4 Adult Male Accessory Gland    24.5 Adult Carcass    51.6 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    35.25 Larval Midgut    68.9 Larval Hindgut    43.5 Larval Malpighian Tubules    77.9 Larval Fat Body    94.8 Larval Salivary Gland    40.4 Larval Trachea    35.075 Larval Carcass    46.875 Adult Head    32.8 Adult Eye    21.65 Adult Brain    28.8 Adult Thoracic-Abdominal Ganglion    33.2 Adult Crop    59 Adult Midgut    71.1 Adult Hindgut    38.2 Adult Malpighian Tubules    117.2 Adult Fat Body    89.2 Adult Salivary Gland    57.4 Adult Heart    54.2 Adult VirginFemale Spermatheca    54.5 Adult InseminatedFemale Spermatheca    55.4 Adult Ovary    73.8 Adult Testis    34.4 Adult Male Accessory Gland    24.5 Adult Carcass    51.6 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    35.25 Larval Midgut    68.9 Larval Hindgut    43.5 Larval Malpighian Tubules    77.9 Larval Fat Body    94.8 Larval Salivary Gland    40.4 Larval Trachea    35.075 Larval Carcass    46.875 Adult Head    32.8 Adult Eye    21.65 Adult Brain    28.8 Adult Thoracic-Abdominal Ganglion    33.2 Adult Crop    59 Adult Midgut    71.1 Adult Hindgut    38.2 Adult Malpighian Tubules    117.2 Adult Fat Body    89.2 Adult Salivary Gland    57.4 Adult Heart    54.2 Adult VirginFemale Spermatheca    54.5 Adult InseminatedFemale Spermatheca    55.4 Adult Ovary    73.8 Adult Testis    34.4 Adult Male Accessory Gland    24.5 Adult Carcass    51.6 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    35.25 Larval Midgut    68.9 Larval Hindgut    43.5 Larval Malpighian Tubules    77.9 Larval Fat Body    94.8 Larval Salivary Gland    40.4 Larval Trachea    35.075 Larval Carcass    46.875 Adult Head    32.8 Adult Eye    21.65 Adult Brain    28.8 Adult Thoracic-Abdominal Ganglion    33.2 Adult Crop    59 Adult Midgut    71.1 Adult Hindgut    38.2 Adult Malpighian Tubules    117.2 Adult Fat Body    89.2 Adult Salivary Gland    57.4 Adult Heart    54.2 Adult VirginFemale Spermatheca    54.5 Adult InseminatedFemale Spermatheca    55.4 Adult Ovary    73.8 Adult Testis    34.4 Adult Male Accessory Gland    24.5 Adult Carcass    51.6 Expression Level Scale  None   Low   Moderate  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    35.25 Larval Midgut    68.9 Larval Hindgut    43.5 Larval Malpighian Tubules    77.9 Larval Fat Body    94.8 Larval Salivary Gland    40.4 Larval Trachea    35.075 Larval Carcass    46.875 Adult Head    32.8 Adult Eye    21.65 Adult Brain    28.8 Adult Thoracic-Abdominal Ganglion    33.2 Adult Crop    59 Adult Midgut    71.1 Adult Hindgut    38.2 Adult Malpighian Tubules    117.2 Adult Fat Body    89.2 Adult Salivary Gland    57.4 Adult Heart    54.2 Adult VirginFemale Spermatheca    54.5 Adult InseminatedFemale Spermatheca    55.4 Adult Ovary    73.8 Adult Testis    34.4 Adult Male Accessory Gland    24.5 Adult Carcass    51.6 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    35.25 Larval Midgut    68.9 Larval Hindgut    43.5 Larval Malpighian Tubules    77.9 Larval Fat Body    94.8 Larval Salivary Gland    40.4 Larval Trachea    35.075 Larval Carcass    46.875 Adult Head    32.8 Adult Eye    21.65 Adult Brain    28.8 Adult Thoracic-Abdominal Ganglion    33.2 Adult Crop    59 Adult Midgut    71.1 Adult Hindgut    38.2 Adult Malpighian Tubules    117.2 Adult Fat Body    89.2 Adult Salivary Gland    57.4 Adult Heart    54.2 Adult VirginFemale Spermatheca    54.5 Adult InseminatedFemale Spermatheca    55.4 Adult Ovary    73.8 Adult Testis    34.4 Adult Male Accessory Gland    24.5 Adult Carcass    51.6 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    35.25 Larval Midgut    68.9 Larval Hindgut    43.5 Larval Malpighian Tubules    77.9 Larval Fat Body    94.8 Larval Salivary Gland    40.4 Larval Trachea    35.075 Larval Carcass    46.875 Adult Head    32.8 Adult Eye    21.65 Adult Brain    28.8 Adult Thoracic-Abdominal Ganglion    33.2 Adult Crop    59 Adult Midgut    71.1 Adult Hindgut    38.2 Adult Malpighian Tubules    117.2 Adult Fat Body    89.2 Adult Salivary Gland    57.4 Adult Heart    54.2 Adult VirginFemale Spermatheca    54.5 Adult InseminatedFemale Spermatheca    55.4 Adult Ovary    73.8 Adult Testis    34.4 Adult Male Accessory Gland    24.5 Adult Carcass    51.6 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    32.8   NA  Eye    21.65   NA  Brain    28.8   35.25  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    33.2   NA  Crop    59   68.9  Midgut    71.1   43.5  Hindgut    38.2   77.9  Malpighian Tubules    117.2   94.8  Fat Body    89.2   40.4  Salivary Gland    57.4   NA  Heart    54.2   35.075  Trachea    NA   NA  VirginFemale Spermatheca    54.5   NA  InseminatedFemale Spermatheca    55.4   NA  Ovary    73.8   NA  Testis    34.4   NA  Male Accessory Gland    no informative data   46.875  Carcass    51.6 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    2 central nervous system, larvae L3    2 central nervous system, pupae P8    2 head, virgin 1-day female    3 head, virgin 4-day female    2 head, virgin 20-day female    2 head, mated 1-day female    3 head, mated 4-day female    2 head, mated 20-day female    2 head, mated 1-day male    2 head, mated 4-day male    2 head, mated 20-day male    3 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    5 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    3 fat body, white prepupae    3 fat body, pupae P8    0 carcass, larvae L3 wandering    3 carcass, 1-day adult    3 carcass, 4-day adult    3 carcass, 20-day adult    3 ovary, virgin 4-day female    11 ovary, mated 4-day female    8 testis, mated 4-day male    1 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    2 central nervous system, larvae L3    2 central nervous system, pupae P8    2 head, virgin 1-day female    3 head, virgin 4-day female    2 head, virgin 20-day female    2 head, mated 1-day female    3 head, mated 4-day female    2 head, mated 20-day female    2 head, mated 1-day male    2 head, mated 4-day male    2 head, mated 20-day male    3 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    5 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    3 fat body, white prepupae    3 fat body, pupae P8    0 carcass, larvae L3 wandering    3 carcass, 1-day adult    3 carcass, 4-day adult    3 carcass, 20-day adult    3 ovary, virgin 4-day female    11 ovary, mated 4-day female    8 testis, mated 4-day male    1 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    2 central nervous system, larvae L3    2 central nervous system, pupae P8    2 head, virgin 1-day female    3 head, virgin 4-day female    2 head, virgin 20-day female    2 head, mated 1-day female    3 head, mated 4-day female    2 head, mated 20-day female    2 head, mated 1-day male    2 head, mated 4-day male    2 head, mated 20-day male    3 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    5 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    3 fat body, white prepupae    3 fat body, pupae P8    0 carcass, larvae L3 wandering    3 carcass, 1-day adult    3 carcass, 4-day adult    3 carcass, 20-day adult    3 ovary, virgin 4-day female    11 ovary, mated 4-day female    8 testis, mated 4-day male    1 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    2 central nervous system, larvae L3    2 central nervous system, pupae P8    2 head, virgin 1-day female    3 head, virgin 4-day female    2 head, virgin 20-day female    2 head, mated 1-day female    3 head, mated 4-day female    2 head, mated 20-day female    2 head, mated 1-day male    2 head, mated 4-day male    2 head, mated 20-day male    3 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    5 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    3 fat body, white prepupae    3 fat body, pupae P8    0 carcass, larvae L3 wandering    3 carcass, 1-day adult    3 carcass, 4-day adult    3 carcass, 20-day adult    3 ovary, virgin 4-day female    11 ovary, mated 4-day female    8 testis, mated 4-day male    1 accessory gland, mated 4-day male    1 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    2 central nervous system, larvae L3    2 central nervous system, pupae P8    2 head, virgin 1-day female    3 head, virgin 4-day female    2 head, virgin 20-day female    2 head, mated 1-day female    3 head, mated 4-day female    2 head, mated 20-day female    2 head, mated 1-day male    2 head, mated 4-day male    2 head, mated 20-day male    3 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    5 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    3 fat body, white prepupae    3 fat body, pupae P8    0 carcass, larvae L3 wandering    3 carcass, 1-day adult    3 carcass, 4-day adult    3 carcass, 20-day adult    3 ovary, virgin 4-day female    11 ovary, mated 4-day female    8 testis, mated 4-day male    1 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    2 central nervous system, larvae L3    2 central nervous system, pupae P8    2 head, virgin 1-day female    3 head, virgin 4-day female    2 head, virgin 20-day female    2 head, mated 1-day female    3 head, mated 4-day female    2 head, mated 20-day female    2 head, mated 1-day male    2 head, mated 4-day male    2 head, mated 20-day male    3 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    5 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    3 fat body, white prepupae    3 fat body, pupae P8    0 carcass, larvae L3 wandering    3 carcass, 1-day adult    3 carcass, 4-day adult    3 carcass, 20-day adult    3 ovary, virgin 4-day female    11 ovary, mated 4-day female    8 testis, mated 4-day male    1 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    2 central nervous system, larvae L3    2 central nervous system, pupae P8    2 head, virgin 1-day female    3 head, virgin 4-day female    2 head, virgin 20-day female    2 head, mated 1-day female    3 head, mated 4-day female    2 head, mated 20-day female    2 head, mated 1-day male    2 head, mated 4-day male    2 head, mated 20-day male    3 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    5 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    3 fat body, white prepupae    3 fat body, pupae P8    0 carcass, larvae L3 wandering    3 carcass, 1-day adult    3 carcass, 4-day adult    3 carcass, 20-day adult    3 ovary, virgin 4-day female    11 ovary, mated 4-day female    8 testis, mated 4-day male    1 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    2 central nervous system, larvae L3    2 central nervous system, pupae P8    2 head, virgin 1-day female    3 head, virgin 4-day female    2 head, virgin 20-day female    2 head, mated 1-day female    3 head, mated 4-day female    2 head, mated 20-day female    2 head, mated 1-day male    2 head, mated 4-day male    2 head, mated 20-day male    3 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    5 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    3 fat body, white prepupae    3 fat body, pupae P8    0 carcass, larvae L3 wandering    3 carcass, 1-day adult    3 carcass, 4-day adult    3 carcass, 20-day adult    3 ovary, virgin 4-day female    11 ovary, mated 4-day female    8 testis, mated 4-day male    1 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages, during late pupal stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    19 embryo 02-04hr    6 embryo 04-06hr    7 embryo 06-08hr    6 embryo 08-10hr    5 embryo 10-12hr    4 embryo 12-14hr    5 embryo 14-16hr    4 embryo 16-18hr    5 embryo 18-20hr    6 embryo 20-22hr    7 embryo 22-24hr    9 larva L1    7 larva L2    7 larva L3 12hr old    6 larva L3 puffstage 1-2    6 larva L3 puffstage 3-6    6 larva L3 puffstage 7-9    8 white prepupae new    6 white prepupae 12hr    6 white prepupae 24hr    6 pupae 2d postWPP    10 pupae 3d postWPP    8 pupae 4d postWPP    25 adult male 01day    14 adult male 05day    6 adult male 30day    5 adult female 01day    14 adult female 05day    13 adult female 30day    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    19 embryo 02-04hr    6 embryo 04-06hr    7 embryo 06-08hr    6 embryo 08-10hr    5 embryo 10-12hr    4 embryo 12-14hr    5 embryo 14-16hr    4 embryo 16-18hr    5 embryo 18-20hr    6 embryo 20-22hr    7 embryo 22-24hr    9 larva L1    7 larva L2    7 larva L3 12hr old    6 larva L3 puffstage 1-2    6 larva L3 puffstage 3-6    6 larva L3 puffstage 7-9    8 white prepupae new    6 white prepupae 12hr    6 white prepupae 24hr    6 pupae 2d postWPP    10 pupae 3d postWPP    8 pupae 4d postWPP    25 adult male 01day    14 adult male 05day    6 adult male 30day    5 adult female 01day    14 adult female 05day    13 adult female 30day    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    19 embryo 02-04hr    6 embryo 04-06hr    7 embryo 06-08hr    6 embryo 08-10hr    5 embryo 10-12hr    4 embryo 12-14hr    5 embryo 14-16hr    4 embryo 16-18hr    5 embryo 18-20hr    6 embryo 20-22hr    7 embryo 22-24hr    9 larva L1    7 larva L2    7 larva L3 12hr old    6 larva L3 puffstage 1-2    6 larva L3 puffstage 3-6    6 larva L3 puffstage 7-9    8 white prepupae new    6 white prepupae 12hr    6 white prepupae 24hr    6 pupae 2d postWPP    10 pupae 3d postWPP    8 pupae 4d postWPP    25 adult male 01day    14 adult male 05day    6 adult male 30day    5 adult female 01day    14 adult female 05day    13 adult female 30day    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    19 embryo 02-04hr    6 embryo 04-06hr    7 embryo 06-08hr    6 embryo 08-10hr    5 embryo 10-12hr    4 embryo 12-14hr    5 embryo 14-16hr    4 embryo 16-18hr    5 embryo 18-20hr    6 embryo 20-22hr    7 embryo 22-24hr    9 larva L1    7 larva L2    7 larva L3 12hr old    6 larva L3 puffstage 1-2    6 larva L3 puffstage 3-6    6 larva L3 puffstage 7-9    8 white prepupae new    6 white prepupae 12hr    6 white prepupae 24hr    6 pupae 2d postWPP    10 pupae 3d postWPP    8 pupae 4d postWPP    25 adult male 01day    14 adult male 05day    6 adult male 30day    5 adult female 01day    14 adult female 05day    13 adult female 30day    12 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    19 embryo 02-04hr    6 embryo 04-06hr    7 embryo 06-08hr    6 embryo 08-10hr    5 embryo 10-12hr    4 embryo 12-14hr    5 embryo 14-16hr    4 embryo 16-18hr    5 embryo 18-20hr    6 embryo 20-22hr    7 embryo 22-24hr    9 larva L1    7 larva L2    7 larva L3 12hr old    6 larva L3 puffstage 1-2    6 larva L3 puffstage 3-6    6 larva L3 puffstage 7-9    8 white prepupae new    6 white prepupae 12hr    6 white prepupae 24hr    6 pupae 2d postWPP    10 pupae 3d postWPP    8 pupae 4d postWPP    25 adult male 01day    14 adult male 05day    6 adult male 30day    5 adult female 01day    14 adult female 05day    13 adult female 30day    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    19 embryo 02-04hr    6 embryo 04-06hr    7 embryo 06-08hr    6 embryo 08-10hr    5 embryo 10-12hr    4 embryo 12-14hr    5 embryo 14-16hr    4 embryo 16-18hr    5 embryo 18-20hr    6 embryo 20-22hr    7 embryo 22-24hr    9 larva L1    7 larva L2    7 larva L3 12hr old    6 larva L3 puffstage 1-2    6 larva L3 puffstage 3-6    6 larva L3 puffstage 7-9    8 white prepupae new    6 white prepupae 12hr    6 white prepupae 24hr    6 pupae 2d postWPP    10 pupae 3d postWPP    8 pupae 4d postWPP    25 adult male 01day    14 adult male 05day    6 adult male 30day    5 adult female 01day    14 adult female 05day    13 adult female 30day    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    19 embryo 02-04hr    6 embryo 04-06hr    7 embryo 06-08hr    6 embryo 08-10hr    5 embryo 10-12hr    4 embryo 12-14hr    5 embryo 14-16hr    4 embryo 16-18hr    5 embryo 18-20hr    6 embryo 20-22hr    7 embryo 22-24hr    9 larva L1    7 larva L2    7 larva L3 12hr old    6 larva L3 puffstage 1-2    6 larva L3 puffstage 3-6    6 larva L3 puffstage 7-9    8 white prepupae new    6 white prepupae 12hr    6 white prepupae 24hr    6 pupae 2d postWPP    10 pupae 3d postWPP    8 pupae 4d postWPP    25 adult male 01day    14 adult male 05day    6 adult male 30day    5 adult female 01day    14 adult female 05day    13 adult female 30day    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    19 embryo 02-04hr    6 embryo 04-06hr    7 embryo 06-08hr    6 embryo 08-10hr    5 embryo 10-12hr    4 embryo 12-14hr    5 embryo 14-16hr    4 embryo 16-18hr    5 embryo 18-20hr    6 embryo 20-22hr    7 embryo 22-24hr    9 larva L1    7 larva L2    7 larva L3 12hr old    6 larva L3 puffstage 1-2    6 larva L3 puffstage 3-6    6 larva L3 puffstage 7-9    8 white prepupae new    6 white prepupae 12hr    6 white prepupae 24hr    6 pupae 2d postWPP    10 pupae 3d postWPP    8 pupae 4d postWPP    25 adult male 01day    14 adult male 05day    6 adult male 30day    5 adult female 01day    14 adult female 05day    13 adult female 30day    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    6 Schneider line 2 Sg4    6 embryonic 1182-4H    3 embryonic GM2    4 embryonic Kc167    6 embryonic S1    5 embryonic S3    6 leg disc CME L1    4 wing disc CME-W2    10 wing disc ML-DmD8    4 wing disc ML-DmD9    7 wing disc ML-DmD16-c3    4 wing disc ML-DmD21    2 wing disc ML-DmD32    3 haltere disc ML-DmD17-c3    9 eye-antennal disc ML-DmD11    7 antennal disc ML-DmD20-c5    9 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    4 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    7 ovary fGS/OSS    4 ovary OSC    3 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    6 Schneider line 2 Sg4    6 embryonic 1182-4H    3 embryonic GM2    4 embryonic Kc167    6 embryonic S1    5 embryonic S3    6 leg disc CME L1    4 wing disc CME-W2    10 wing disc ML-DmD8    4 wing disc ML-DmD9    7 wing disc ML-DmD16-c3    4 wing disc ML-DmD21    2 wing disc ML-DmD32    3 haltere disc ML-DmD17-c3    9 eye-antennal disc ML-DmD11    7 antennal disc ML-DmD20-c5    9 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    4 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    7 ovary fGS/OSS    4 ovary OSC    3 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    6 Schneider line 2 Sg4    6 embryonic 1182-4H    3 embryonic GM2    4 embryonic Kc167    6 embryonic S1    5 embryonic S3    6 leg disc CME L1    4 wing disc CME-W2    10 wing disc ML-DmD8    4 wing disc ML-DmD9    7 wing disc ML-DmD16-c3    4 wing disc ML-DmD21    2 wing disc ML-DmD32    3 haltere disc ML-DmD17-c3    9 eye-antennal disc ML-DmD11    7 antennal disc ML-DmD20-c5    9 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    4 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    7 ovary fGS/OSS    4 ovary OSC    3 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    6 Schneider line 2 Sg4    6 embryonic 1182-4H    3 embryonic GM2    4 embryonic Kc167    6 embryonic S1    5 embryonic S3    6 leg disc CME L1    4 wing disc CME-W2    10 wing disc ML-DmD8    4 wing disc ML-DmD9    7 wing disc ML-DmD16-c3    4 wing disc ML-DmD21    2 wing disc ML-DmD32    3 haltere disc ML-DmD17-c3    9 eye-antennal disc ML-DmD11    7 antennal disc ML-DmD20-c5    9 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    4 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    7 ovary fGS/OSS    4 ovary OSC    3 ovary OSS    1 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    6 Schneider line 2 Sg4    6 embryonic 1182-4H    3 embryonic GM2    4 embryonic Kc167    6 embryonic S1    5 embryonic S3    6 leg disc CME L1    4 wing disc CME-W2    10 wing disc ML-DmD8    4 wing disc ML-DmD9    7 wing disc ML-DmD16-c3    4 wing disc ML-DmD21    2 wing disc ML-DmD32    3 haltere disc ML-DmD17-c3    9 eye-antennal disc ML-DmD11    7 antennal disc ML-DmD20-c5    9 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    4 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    7 ovary fGS/OSS    4 ovary OSC    3 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    6 Schneider line 2 Sg4    6 embryonic 1182-4H    3 embryonic GM2    4 embryonic Kc167    6 embryonic S1    5 embryonic S3    6 leg disc CME L1    4 wing disc CME-W2    10 wing disc ML-DmD8    4 wing disc ML-DmD9    7 wing disc ML-DmD16-c3    4 wing disc ML-DmD21    2 wing disc ML-DmD32    3 haltere disc ML-DmD17-c3    9 eye-antennal disc ML-DmD11    7 antennal disc ML-DmD20-c5    9 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    4 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    7 ovary fGS/OSS    4 ovary OSC    3 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    6 Schneider line 2 Sg4    6 embryonic 1182-4H    3 embryonic GM2    4 embryonic Kc167    6 embryonic S1    5 embryonic S3    6 leg disc CME L1    4 wing disc CME-W2    10 wing disc ML-DmD8    4 wing disc ML-DmD9    7 wing disc ML-DmD16-c3    4 wing disc ML-DmD21    2 wing disc ML-DmD32    3 haltere disc ML-DmD17-c3    9 eye-antennal disc ML-DmD11    7 antennal disc ML-DmD20-c5    9 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    4 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    7 ovary fGS/OSS    4 ovary OSC    3 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    6 Schneider line 2 Sg4    6 embryonic 1182-4H    3 embryonic GM2    4 embryonic Kc167    6 embryonic S1    5 embryonic S3    6 leg disc CME L1    4 wing disc CME-W2    10 wing disc ML-DmD8    4 wing disc ML-DmD9    7 wing disc ML-DmD16-c3    4 wing disc ML-DmD21    2 wing disc ML-DmD32    3 haltere disc ML-DmD17-c3    9 eye-antennal disc ML-DmD11    7 antennal disc ML-DmD20-c5    9 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    4 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    7 ovary fGS/OSS    4 ovary OSC    3 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    2 cold shock, 4-day adult    1 heat shock, 4-day adult    5 Cadmium 50 mM 6 hrs, larvae L3    4 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    4 Cadmium 100 mM 48 hrs, 4-day adult    6 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    2 Zinc 4.5 mM 48 hrs, 4-day adult    3 Ethanol 2.5% 3 hrs, larvae L3    7 Ethanol 5% 3 hrs, larvae L3    4 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    5 Caffeine 25 mg/ml 48 hrs, 4-day adult    2 Paraquat 5 mM 48 hrs, 4-day adult    5 Paraquat 10 mM 48 hrs, 4-day adult    5 Rotenone 2 μg 12 hrs, larvae L3    5 Rotenone 8 μg 12 hrs, larvae L3    3 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    2 cold shock, 4-day adult    1 heat shock, 4-day adult    5 Cadmium 50 mM 6 hrs, larvae L3    4 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    4 Cadmium 100 mM 48 hrs, 4-day adult    6 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    2 Zinc 4.5 mM 48 hrs, 4-day adult    3 Ethanol 2.5% 3 hrs, larvae L3    7 Ethanol 5% 3 hrs, larvae L3    4 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    5 Caffeine 25 mg/ml 48 hrs, 4-day adult    2 Paraquat 5 mM 48 hrs, 4-day adult    5 Paraquat 10 mM 48 hrs, 4-day adult    5 Rotenone 2 μg 12 hrs, larvae L3    5 Rotenone 8 μg 12 hrs, larvae L3    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    2 cold shock, 4-day adult    1 heat shock, 4-day adult    5 Cadmium 50 mM 6 hrs, larvae L3    4 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    4 Cadmium 100 mM 48 hrs, 4-day adult    6 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    2 Zinc 4.5 mM 48 hrs, 4-day adult    3 Ethanol 2.5% 3 hrs, larvae L3    7 Ethanol 5% 3 hrs, larvae L3    4 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    5 Caffeine 25 mg/ml 48 hrs, 4-day adult    2 Paraquat 5 mM 48 hrs, 4-day adult    5 Paraquat 10 mM 48 hrs, 4-day adult    5 Rotenone 2 μg 12 hrs, larvae L3    5 Rotenone 8 μg 12 hrs, larvae L3    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    2 cold shock, 4-day adult    1 heat shock, 4-day adult    5 Cadmium 50 mM 6 hrs, larvae L3    4 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    4 Cadmium 100 mM 48 hrs, 4-day adult    6 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    2 Zinc 4.5 mM 48 hrs, 4-day adult    3 Ethanol 2.5% 3 hrs, larvae L3    7 Ethanol 5% 3 hrs, larvae L3    4 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    5 Caffeine 25 mg/ml 48 hrs, 4-day adult    2 Paraquat 5 mM 48 hrs, 4-day adult    5 Paraquat 10 mM 48 hrs, 4-day adult    5 Rotenone 2 μg 12 hrs, larvae L3    5 Rotenone 8 μg 12 hrs, larvae L3    3 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    2 cold shock, 4-day adult    1 heat shock, 4-day adult    5 Cadmium 50 mM 6 hrs, larvae L3    4 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    4 Cadmium 100 mM 48 hrs, 4-day adult    6 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    2 Zinc 4.5 mM 48 hrs, 4-day adult    3 Ethanol 2.5% 3 hrs, larvae L3    7 Ethanol 5% 3 hrs, larvae L3    4 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    5 Caffeine 25 mg/ml 48 hrs, 4-day adult    2 Paraquat 5 mM 48 hrs, 4-day adult    5 Paraquat 10 mM 48 hrs, 4-day adult    5 Rotenone 2 μg 12 hrs, larvae L3    5 Rotenone 8 μg 12 hrs, larvae L3    3 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    2 cold shock, 4-day adult    1 heat shock, 4-day adult    5 Cadmium 50 mM 6 hrs, larvae L3    4 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    4 Cadmium 100 mM 48 hrs, 4-day adult    6 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    2 Zinc 4.5 mM 48 hrs, 4-day adult    3 Ethanol 2.5% 3 hrs, larvae L3    7 Ethanol 5% 3 hrs, larvae L3    4 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    5 Caffeine 25 mg/ml 48 hrs, 4-day adult    2 Paraquat 5 mM 48 hrs, 4-day adult    5 Paraquat 10 mM 48 hrs, 4-day adult    5 Rotenone 2 μg 12 hrs, larvae L3    5 Rotenone 8 μg 12 hrs, larvae L3    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    2 cold shock, 4-day adult    1 heat shock, 4-day adult    5 Cadmium 50 mM 6 hrs, larvae L3    4 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    4 Cadmium 100 mM 48 hrs, 4-day adult    6 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    2 Zinc 4.5 mM 48 hrs, 4-day adult    3 Ethanol 2.5% 3 hrs, larvae L3    7 Ethanol 5% 3 hrs, larvae L3    4 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    5 Caffeine 25 mg/ml 48 hrs, 4-day adult    2 Paraquat 5 mM 48 hrs, 4-day adult    5 Paraquat 10 mM 48 hrs, 4-day adult    5 Rotenone 2 μg 12 hrs, larvae L3    5 Rotenone 8 μg 12 hrs, larvae L3    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    2 cold shock, 4-day adult    1 heat shock, 4-day adult    5 Cadmium 50 mM 6 hrs, larvae L3    4 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    4 Cadmium 100 mM 48 hrs, 4-day adult    6 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    2 Zinc 4.5 mM 48 hrs, 4-day adult    3 Ethanol 2.5% 3 hrs, larvae L3    7 Ethanol 5% 3 hrs, larvae L3    4 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    5 Caffeine 25 mg/ml 48 hrs, 4-day adult    2 Paraquat 5 mM 48 hrs, 4-day adult    5 Paraquat 10 mM 48 hrs, 4-day adult    5 Rotenone 2 μg 12 hrs, larvae L3    5 Rotenone 8 μg 12 hrs, larvae L3    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_26 mE1_20_mRNA_expression_cluster_05
External Data & Images
Linkouts	BDGP expression data • LD43687 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0013563 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6760-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for Pex1 Stages(s) 1-3 Stages(s) 7-8 Stages(s) 9-10 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal Pex1s4868 lethal (with Df(3L)fz-GF3b) Pex1S084807 lethal (with Df(3L)fz-GS1a) Pex11 Pex1s4868 lethal (with Pex11) Pex1s4868 lethal (with Pex1s4868) Pex11 lethal | larval stage Pex11 lethal | larval stage | recessive Pex1s4868 lethal | recessive Pex102402 Pex1s4868 Pex1S084807 partially lethal - majority die Pex102402 partially lethal - majority die | recessive Pex102402 Pex1S084807 viable, with Scer\GAL4pnr-MD237 Pex1GD12029 Other Phenotypes Allele body size defective | larval stage | recessive Pex1s4868 cytokinesis defective Pex1s4868 developmental rate defective | larval stage | recessive Pex1s4868 feeding behavior defective | larval stage | recessive Pex1s4868 increased cell death | larval stage Pex1unspecified locomotor behavior defective | larval stage | recessive Pex1s4868 meiotic cell cycle defective Pex1s4868 neuroanatomy defective | embryonic stage 15 Pex1s4868 Phenotype manifest in Allele anterior spiracle primordium | embryonic stage 15 Pex1s4868 central nervous system | embryonic stage 15 Pex1s4868 embryonic/larval glial cell | embryonic stage 15 Pex1s4868 embryonic/larval salivary gland | embryonic stage Pex1unspecified embryonic brain | embryonic stage 15 Pex1s4868 eye-antennal disc primordium | embryonic stage 15 Pex1s4868 Malpighian tubule primordium | embryonic stage 15 Pex1s4868 peripheral nervous system | embryonic stage 15 Pex1s4868 posterior spiracle primordium | embryonic stage 15 Pex1s4868 spermatid Pex1s4868 testis Pex1s4868 ventral nerve cord | embryonic stage 15 Pex1s4868
Classical Alleles ( 5 )
For All Classical Alleles Show
Allele of Pex1 Class Mutagen Stocks Known lesion Pex11 hypomorphic allele - molecular evidence X ray 1 -- Pex1s4868 hypomorphic allele - molecular evidence P-element activity 1 Yes Pex102402 P-element activity 0 Yes Pex1S084807 Delta2-3 P-element activity 0 Yes Pex1unspecified 0 --
Alleles Carried on Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Pex1 Class Mutagen Stocks Known lesion Pex1GD12029 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Pex1HM05190 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Pex1NIG.6760R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes Pex1Scer\UAS.cMa in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(3L)D-1rv16 (Burmester et al., 2000, Carpenter, 1994, Russell et al., 1996) Df(3L)D-5rv6 (Burmester et al., 2000, Carpenter, 1994, Russell et al., 1996) Df(3L)D-5rv12 (Carpenter, 1994) Df(3L)D-5rv14 (Carpenter, 1994) Df(3L)Exel6120 (Ryder, 2004.4.26) Df(3L)fz-CAL5 (Spradling et al., 1999) Df(3L)fz-D21 (Burmester et al., 2000, Carpenter, 1994) Df(3L)fz-GF3b (Szeged Stock Center, 1998-, Burmester et al., 2000, Carpenter, 1994, Deak et al., 1997) Df(3L)fz-GS1a (Spradling et al., 1999, Burmester et al., 2000, Carpenter, 1994, Russell et al., 1996, Mast et al., 2011)
Not disrupted in	Df(3L)D4rv42 (Carpenter, 1994) Df(3L)fz-CAL5 (BDGP Project Members, 1994-1999) Df(3L)fz-D21 (BDGP Project Members, 1994-1999) Df(3L)fz-GF3b (Spradling et al., 1999, BDGP Project Members, 1994-1999) Df(3L)fz-GS1a (BDGP Project Members, 1994-1999) Df(3L)fz-M21 (Burmester et al., 2000, Carpenter, 1994) Df(3L)J40 (Burmester et al., 2000) In(3L)D4rv32 (Carpenter, 1994) In(3LR)D4rv37 (Carpenter, 1994) T(2;3)D4rv38 (Carpenter, 1994) T(Y;2;3)D4rv33 (Carpenter, 1994)
Duplicated in	Dp(3;3)D4rv36 (Carpenter, 1994)
Partially disrupted in	Df(3L)D-4rv34 (Carpenter, 1994)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{NIG.6760R} NA P{TRiP.HM05190} NA P{UAS-Pex1.M} NA
Insertions
	Type of insertions Name Expression data insertion of enhancer trap P{lacW}Pex1s4868 No P{lacW}Pex1S084807 No P{PZ}Pex102402 No
Gene Ontology: Function, Process & Cellular Component ( 10 unique terms )
Terms Based on Experimental Evidence ( 5 terms )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
central nervous system development inferred from mutant phenotype (Mast et al., 2011) glial cell development inferred from mutant phenotype (Mast et al., 2011) peripheral nervous system development inferred from mutant phenotype (Mast et al., 2011) peroxisome organization inferred from mutant phenotype (Mast et al., 2011) spermatocyte division inferred from mutant phenotype (Chen et al., 2010)
Cellular Component ( 0 terms)
Terms Based on Predictions or Assertions ( 6 terms )
Molecular Function
CV term Evidence References
ATPase activity, coupled inferred from sequence or structural similarity with NCBI_gi:4505725 (FlyBase, 1992-) ATP binding inferred from electronic annotation with InterPro:IPR003959, InterPro:IPR003960, InterPro:IPR015342 (FlyBase Curators et al., 2004-)
Biological Process
CV term Evidence References
peroxisome organization inferred from sequence or structural similarity with NCBI_gi:4505725 (FlyBase, 1992-) protein targeting to peroxisome inferred from electronic annotation with InterPro:IPR025653 (FlyBase Curators et al., 2004-)
Cellular Component
CV term Evidence References
peroxisomal membrane inferred from electronic annotation with InterPro:IPR025653 (FlyBase Curators et al., 2004-) peroxisome inferred from sequence or structural similarity with NCBI_gi:4505725 (FlyBase, 1992-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Pex1 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 69691 DroID - A comprehensive database of gene and protein interactions. • FBgn0013563 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 45460
Orthologs
OrthoDB Orthologs (41) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6NP7NW Dipteran inclusive ortholog search EOG6DNFCD Insect inclusive ortholog search EOG6TQK52 Arthropod inclusive ortholog search EOG6573NK Metazoa inclusive ortholog search EOG67T56F
Orthologs in Drosophila Species (EOG6NP7NW)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\Pex1     Drosophila simulans   Dsim\GD14479 Y   Drosophila sechellia   Dsec\GM25452 Y   Drosophila erecta   Dere\GG15672 Y   Drosophila yakuba   Dyak\GE22001 Y   Drosophila ananassae   Dana\btl     Drosophila pseudoobscura pseudoobscura   Dpse\GA23750     Drosophila persimilis   Dper\GL25293     Drosophila willistoni   Dwil\GK17038 Y   Drosophila virilis   Dvir\GJ13751     Drosophila mojavensis   Dmoj\GI13761     Drosophila grimshawi   Dgri\GH15109     Drosophila grimshawi   Dgri\GH23599
Orthologs in non-Drosophila Dipterans (EOG6DNFCD)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL000895   Anopheles gambiae Malaria mosquito  Agam\AGAP010924   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ017662
Orthologs in non-Dipteran Insects (EOG6TQK52)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB45107   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG014043   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH16419   Atta cephalotes Leafcutter ant  Acep\ACEP10868   Camponotus floridanus Florida carpenter ant  Cflo\CFLO19328   Camponotus floridanus Florida carpenter ant  Cflo\CFLO13398   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL13271   Linepithema humile Argentine ant  Lhum\LH19423   Pogonomyrmex barbatus Red harvester ant  Pbar\PB12513   Solenopsis invicta Red fire ant  Sinv\SINV19725   Acyrthosiphon pisum Pea aphid  Apim\ACYPI008953   Bombyx mori Silkmoth  Bmor\BGIBMGA003776   Bombyx mori Silkmoth  Bmor\BGIBMGA003775   Pediculus humanus Human body louse  Phum\PHUM136080   Tribolium castaneum Red flour beetle  Tcas\TC014648
Orthologs in non-Insect Arthropods (EOG6573NK)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\JGI_V11_94457
Orthologs in non-Arthropod Metazoa (EOG67T56F)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\prx-1   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_018145gn   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_018556gn   Danio rerio Zebrafish  Drer\pex1   Xenopus tropicalis Western clawed frog  Xtro\pex1   Gallus gallus Domestic chicken  Ggal\PEX1   Mus musculus House mouse  Mmus\ENSMUSG00000005907   Rattus norvegicus Norway rat  Rnor\Pex1   Homo sapiens Human  Hsap\PEX1
Human Orthologs (1)
Gene OMIM HGNC Hsap\PEX1
AAA Orthologs (5) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD14479 Drosophila sechellia Dsec\GM25452 Drosophila erecta Dere\GG15672 Drosophila yakuba Dyak\GE22001 Drosophila willistoni Dwil\GK17038
Stocks & Reagents
Stocks Listed in FlyBase ( 4 )
Bloomington	28979 y1 v1; P{TRiP.HM05190}attP2 10177 w1118; P{lacW}Pex1s4868/TM3, P{ftz/lacC}SC1, ryRK Sb1 Ser1 4860 Pex11, mwh1 red1 e4/TM3, P{Thb8-lacZ}WD1, Sb1 Ser1
VDRC	v27741 w1118; P{GD12029}v27741
Genomic Clones ( 2 )
	BACR02M13 BACR35M01 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 5 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD43687
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	LP21483
Other clones	RP004226670 RP004516095 RP004547956
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0013563 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 45460
Antibody Information
	polyclonal (Mast et al., 2011)
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: pex1 l(3)70Da (Chen et al., 2010)
Source for database merge of	Source for merge of: l(3)70Da anon-WO0172774.100 anon-WO0172774.101 anon-WO0172774.102 anon-WO0172774.96 anon-WO0172774.99 (FlyBase, 1996-) Source for merge of: l(3)70Da CG6760 (Bayraktaroglu, 2000.4.12)
Additional comments	Source for merge of l(3)70Da anon-WO0172774.100 anon-WO0172774.101 anon-WO0172774.102 anon-WO0172774.96 anon-WO0172774.99 was sequence comparison (date:051113). (FlyBase, 1996-)
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_143759 RefSeq (Proteins) • NP_652016 DDBJ / EMBL / GenBank • AAF49760 AAL68239 AI512050 AJ132810 AJ132814 AJ132815 AJ132816 AJ243811 AQ026396 AQ034052 AW943675 AX260134 AX260136 AX260137 AX260138 AX260139 AX260140 AY075423 CAB51031 Entrez Gene - A searchable database of RefSeq genes. • 45460 UniProtKB/TrEMBL • Q9VUC7 Q9Y090
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Peroxisome biogenesis factor 1 (IPR025653) AAA+ ATPase domain (IPR003593) ATPase, AAA-type, core (IPR003959) ATPase, AAA-type, conserved site (IPR003960) Aspartate decarboxylase-like domain (IPR009010) Peroxisome biogenesis factor 1, N-terminal (IPR015342) P-loop containing nucleoside triphosphate hydrolase (IPR027417) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • LD43687
Linkouts
	BioGRID - A database of protein and genetic interactions • 69691 DroID - A comprehensive database of gene and protein interactions. • FBgn0013563 DRSC - Results from RNAi screens. • FBgn0013563 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0013563 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6760-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0013563 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 45460 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 45460 modMine - Data generated by the modENCODE project. • FBgn0013563
Synonyms & Secondary IDs ( 20 )
Reported As
Symbol Synonym	0848/07 (Deak et al., 1997) anon-WO0172774.96   anon-WO0172774.98   anon-WO0172774.99   anon-WO0172774.100   anon-WO0172774.101   anon-WO0172774.102   CG6760 (Mast et al., 2011) DmCAB51031.1 (Frohlich, 2001) DmelPex1 (Mast et al., 2011) l(3)70Da (Wasbrough et al., 2010, Mast et al., 2011, Schrider et al., 2011, Japanese National Institute of Genetics, 2012.5.21) l(3)02402 (Mink, 1999.2.5, ) l(3)084807 (Mink, 1999.2.5) l(3)s4868 (Spradling et al., 1999, Maroy, 1999.4.20, ) l(3)S084807 (Maroy, 1999.4.20, ) pex1 (Izutsu et al., 2012, Chen et al., 2010, ) Pex1 (Mast et al., 2011, Holderbaum et al., 2012.4.9)
Name Synonym	lethal (3) 70Da   peroxin 1   Peroxin 1
Secondary FlyBase IDs
	FBgn0024587 FBgn0026223 FBgn0028085 FBgn0036409 FBgn0046338 FBgn0046339 FBgn0046340 FBgn0046489 FBgn0046490 FBgn0046491
References ( 39 )
Generate a list of	All references relating to this gene ( 39 )
List References by type	Research paper  ( 10 ) Supplementary material  ( 6 ) Review  ( 1 ) Personal communication to FlyBase  ( 11 ) FlyBase analysis  ( 2 ) DNA/RNA sequence record  ( 3 ) Stock list  ( 3 ) Website  ( 1 ) Patent  ( 1 ) Curated genome annotation  ( 1 )
Recent research papers ( 4 )
	Izutsu et al., 2012, PLoS ONE 7(3): e33288 Genome features of "dark-fly", a Drosophila line reared long-term in a dark environment. [FBrf0217825] Zhou et al., 2012, Proc. Natl. Acad. Sci. U.S.A. 109(19): E1201--E1209 Midlife gene expressions identify modulators of aging through dietary interventions. [FBrf0218233] Mast et al., 2011, Dis. Model Mech. 4(5): 659--672 A Drosophila model for the Zellweger spectrum of peroxisome biogenesis disorders. [FBrf0215017] Schrider et al., 2011, Genome Res. 21(12): 2087--2095 Genome-wide analysis of retrogene polymorphisms in Drosophila melanogaster. [FBrf0216827] Show all research papers ...
Recent reviews (0)
	All reviews listed in FlyBase were published before 2011 Show reviews ...