A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\nuf

General Information
SymbolDmel\nufSpeciesD. melanogaster
Namenuclear falloutAnnotation symbolCG33991
Feature typeprotein_coding_geneFlyBase IDFBgn0013718
Gene Model StatusCurrent Stock availability 28 publicly available
Also Known AsD2, CG7867
Genomic Location
Chromosome (arm)3LRecombination map3-
Cytogenetic map70D3-70D4Sequence location3L:14,183,973..14,226,350 [+]

Genomic Maps

GBrowse View Help
modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene nuclear fallout is referred to in FlyBase by the symbol Dmel\nuf (CG33991, FBgn0013718). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: microtubule binding. There is experimental evidence that it is involved in the biological process: sensory organ precursor cell fate determination; wing disc dorsal/ventral pattern formation; actin cytoskeleton reorganization. 38 alleles are reported. The phenotypes of these alleles are annotated with: trichogen cell; macrochaeta; intersegmental nerve; scutellar bristle. It has 12 annotated transcripts and 12 annotated polypeptides. Protein features are: Rab-binding domain FIP-RBD. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed at stages throughout embryogenesis, during late larval stages, at stages throughout the pupal period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression in all larval and adult organs/tissues ranges from low to undetected. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult hindgut, adult heart, larval fat body, adult salivary gland, larval trachea, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system, larval/adult midgut, larval/adult Malpighian tubules, adult fat body, larval salivary gland, adult female reproductive system, adult male reproductive system. Gene sequence location is 3L:14183973..14226350.

External Summaries
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01
References
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
70D3-70D4  
Limits computationally determined from genome sequence between P{PZ}l(3)70Da02402&P{PZ}btl00208 and P{PZ}Mpcp00564  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
70D3-70D3  
(determined by in situ hybridisation)  
70D3-70D3  
70D3-70D3  
70-70  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\nuf for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0089524 FBtr0321258 FBtr0306620 FBtr0100040 FBtr0100039 FBtr0306619 FBtr0306624 FBtr0075735 FBtr0100042 FBtr0307191 FBtr0075737 FBtr0100043 FBtr0306622 FBtr0100044 FBtr0306623 FBtr0100041 FBtr0075740 FBtr0112438 FBpp0088509 FBpp0302810 FBpp0297579 FBpp0075474 FBpp0075475 FBpp0297575 FBpp0297574 FBpp0075477 FBpp0298020 FBpp0075476 FBpp0075479 FBpp0100130 FBpp0100129 FBpp0297577 FBpp0297578 FBpp0089174 FBpp0075482 FBpp0111353 FBti0011493 FBti0024171 FBti0040226 FBti0072834 FBti0108925 FBti0056084 FBti0046291 FBti0048341 FBti0125684_2 FBti0125684_1 FBti0077033 FBti0024666 FBti0028423 FBti0050670 FBti0053141 FBti0112043 FBti0059497 FBti0007996 FBti0106278 FBti0029888 FBti0110237 FBti0058945 FBti0024779 FBti0011480 FBti0072152_1 FBti0072152_2 FBti0112095 FBti0047017 FBti0125685 FBti0041724 FBti0021348 FBti0056456 FBti0024143 FBti0039468 FBti0044935 FBti0115884
Comments on Gene Model
Gene merge based on EST/cDNA data.
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0100040
  2696
  502
FBtr0100042
  2373
  305
FBtr0100039
  3446
  502
FBtr0100041
  2446
  316
FBtr0100043
  3230
  528
FBtr0100044
  3097
  528
FBtr0306619
 
  3530
  530
FBtr0306620
 
  3527
  529
FBtr0306622
 
  3269
  541
FBtr0306623
 
  3136
  541
FBtr0306624
 
  2735
  515
FBtr0307191
 
  2412
  318
Additional Transcript Data & Comments
Reported size (kB)
3.5, 2.4 (northern blot)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
nuf-PA  
FBpp0075474  
57.1  
502  
4.76  
nuf-PB  
FBpp0075476  
36.1  
305  
4.64  
nuf-PC  
FBpp0075475  
57.1  
502  
4.76  
nuf-PD  
FBpp0089174  
37.3  
316  
4.72  
nuf-PE  
FBpp0100130  
59.9  
528  
4.53  
nuf-PF  
FBpp0100129  
59.9  
528  
4.53  
nuf-PG  
FBpp0297574  
60.2  
530  
4.80  
 
 
nuf-PH  
FBpp0297575  
60.1  
529  
4.80  
 
 
nuf-PJ  
FBpp0297577  
61.1  
541  
4.49  
 
 
nuf-PK  
FBpp0297578  
61.1  
541  
4.49  
 
 
nuf-PL  
FBpp0297579  
58.3  
515  
4.70  
 
 
nuf-PM  
FBpp0298020  
37.4  
318  
4.57  
 
 
Additional Polypeptide Data & Comments
Reported size (kDa)
502 (aa); 57 (kD predicted)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
Comment:reference states 0-3 hr AEL
Additional Descriptive Data
nuf transcripts are detected in 0-3 hr embryos.
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
western blot
Stage
Tissue/Position (including subcellular localization)
Reference
Comment:reference states 0-3 hr AEL
Additional Descriptive Data
A major band of 95 kD and minor bands of 82 and 67 kD are detected in Western blots of 0-3 hr embryos. Following phosphatase treatment, only a single 67 kD band is observed. During late syncytial divisions, nuf protein is highly concentrated at the centrosomes during prophase, and is cytoplasmic during other stages of the nuclear cycle. nuf protein is also concentrated at the centrosomes during interphase of nuclear cycle 14, and during cellularization.
Marker for
Subcellular Localization
CV Term
centrosome, cytoplasm
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view nuf-RH nuf-RA nuf-RC nuf-RL nuf-RG CG32141-RA nuf-RB nuf-RM CG7768-RA nuf-RJ nuf-RE nuf-RK nuf-RF nuf-RD CG7924-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0013718


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0013718
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed at stages throughout embryogenesis, during late larval stages, at stages throughout the pupal period, in stages of adults of both sexes.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0013718 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 2833
embryo 02-04hr
 
 2541
embryo 04-06hr
 
 1986
embryo 06-08hr
 
 2470
embryo 08-10hr
 
 2549
embryo 10-12hr
 
 2518
embryo 12-14hr
 
 3080
embryo 14-16hr
 
 2814
embryo 16-18hr
 
 3109
embryo 18-20hr
 
 2725
embryo 20-22hr
 
 2551
embryo 22-24hr
 
 2887
larva L1
 
 689
larva L2
 
 860
larva L3 12hr old
 
 639
larva L3 puffstage 1-2
 
 525
larva L3 puffstage 3-6
 
 1090
larva L3 puffstage 7-9
 
 1752
white prepupae new
 
 2039
white prepupae 12hr
 
 2098
white prepupae 24hr
 
 1783
pupae 2d postWPP
 
 3231
pupae 3d postWPP
 
 1634
pupae 4d postWPP
 
 1364
adult male 01day
 
 1506
adult male 05day
 
 1285
adult male 30day
 
 1029
adult female 01day
 
 1382
adult female 05day
 
 1995
adult female 30day
 
 1829
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (2833)
embryo 02-04hr
 (2541)
embryo 04-06hr
 (1986)
embryo 06-08hr
 (2470)
embryo 08-10hr
 (2549)
embryo 10-12hr
 (2518)
embryo 12-14hr
 (3080)
embryo 14-16hr
 (2814)
embryo 16-18hr
 (3109)
embryo 18-20hr
 (2725)
embryo 20-22hr
 (2551)
embryo 22-24hr
 (2887)
larva L1
 (689)
larva L2
 (860)
larva L3 12hr old
 (639)
larva L3 puffstage 1-2
 (525)
larva L3 puffstage 3-6
 (1090)
larva L3 puffstage 7-9
 (1752)
white prepupae new
 (2039)
white prepupae 12hr
 (2098)
white prepupae 24hr
 (1783)
pupae 2d postWPP
 (3231)
pupae 3d postWPP
 (1634)
pupae 4d postWPP
 (1364)
adult male 01day
 (1506)
adult male 05day
 (1285)
adult male 30day
 (1029)
adult female 01day
 (1382)
adult female 05day
 (1995)
adult female 30day
 (1829)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (2833)
embryo 02-04hr
 (2541)
embryo 04-06hr
 (1986)
embryo 06-08hr
 (2470)
embryo 08-10hr
 (2549)
embryo 10-12hr
 (2518)
embryo 12-14hr
 (3080)
embryo 14-16hr
 (2814)
embryo 16-18hr
 (3109)
embryo 18-20hr
 (2725)
embryo 20-22hr
 (2551)
embryo 22-24hr
 (2887)
larva L1
 
 689
larva L2
 
 860
larva L3 12hr old
 
 639
larva L3 puffstage 1-2
 
 525
larva L3 puffstage 3-6
 
 1090
larva L3 puffstage 7-9
 (1752)
white prepupae new
 (2039)
white prepupae 12hr
 (2098)
white prepupae 24hr
 (1783)
pupae 2d postWPP
 (3231)
pupae 3d postWPP
 (1634)
pupae 4d postWPP
 
 1364
adult male 01day
 1506
adult male 05day
 
 1285
adult male 30day
 
 1029
adult female 01day
 
 1382
adult female 05day
 (1995)
adult female 30day
 (1829)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 2833
embryo 02-04hr
 
 2541
embryo 04-06hr
 
 1986
embryo 06-08hr
 
 2470
embryo 08-10hr
 
 2549
embryo 10-12hr
 
 2518
embryo 12-14hr
 
 3080
embryo 14-16hr
 
 2814
embryo 16-18hr
 
 3109
embryo 18-20hr
 
 2725
embryo 20-22hr
 
 2551
embryo 22-24hr
 
 2887
larva L1
 
 689
larva L2
 
 860
larva L3 12hr old
 
 639
larva L3 puffstage 1-2
 
 525
larva L3 puffstage 3-6
 
 1090
larva L3 puffstage 7-9
 
 1752
white prepupae new
 
 2039
white prepupae 12hr
 
 2098
white prepupae 24hr
 
 1783
pupae 2d postWPP
 
 3231
pupae 3d postWPP
 
 1634
pupae 4d postWPP
 
 1364
adult male 01day
 
 1506
adult male 05day
 
 1285
adult male 30day
 
 1029
adult female 01day
 
 1382
adult female 05day
 
 1995
adult female 30day
 
 1829
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 2833
embryo 02-04hr
 
 2541
embryo 04-06hr
 
 1986
embryo 06-08hr
 
 2470
embryo 08-10hr
 
 2549
embryo 10-12hr
 
 2518
embryo 12-14hr
 
 3080
embryo 14-16hr
 
 2814
embryo 16-18hr
 
 3109
embryo 18-20hr
 
 2725
embryo 20-22hr
 
 2551
embryo 22-24hr
 
 2887
larva L1
 
 689
larva L2
 
 860
larva L3 12hr old
 
 639
larva L3 puffstage 1-2
 
 525
larva L3 puffstage 3-6
 
 1090
larva L3 puffstage 7-9
 
 1752
white prepupae new
 
 2039
white prepupae 12hr
 
 2098
white prepupae 24hr
 
 1783
pupae 2d postWPP
 
 3231
pupae 3d postWPP
 
 1634
pupae 4d postWPP
 
 1364
adult male 01day
 
 1506
adult male 05day
 
 1285
adult male 30day
 
 1029
adult female 01day
 
 1382
adult female 05day
 
 1995
adult female 30day
 
 1829
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0013718 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 2833
embryo 02-04hr
 
 2541
embryo 04-06hr
 
 1986
embryo 06-08hr
 
 2470
embryo 08-10hr
 
 2549
embryo 10-12hr
 
 2518
embryo 12-14hr
 
 3080
embryo 14-16hr
 
 2814
embryo 16-18hr
 
 3109
embryo 18-20hr
 
 2725
embryo 20-22hr
 
 2551
embryo 22-24hr
 
 2887
larva L1
 
 689
larva L2
 
 860
larva L3 12hr old
 
 639
larva L3 puffstage 1-2
 
 525
larva L3 puffstage 3-6
 
 1090
larva L3 puffstage 7-9
 
 1752
white prepupae new
 
 2039
white prepupae 12hr
 
 2098
white prepupae 24hr
 
 1783
pupae 2d postWPP
 
 3231
pupae 3d postWPP
 
 1634
pupae 4d postWPP
 
 1364
adult male 01day
 
 1506
adult male 05day
 
 1285
adult male 30day
 
 1029
adult female 01day
 
 1382
adult female 05day
 
 1995
adult female 30day
 
 1829
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (2833)
embryo 02-04hr
 (2541)
embryo 04-06hr
 (1986)
embryo 06-08hr
 (2470)
embryo 08-10hr
 (2549)
embryo 10-12hr
 (2518)
embryo 12-14hr
 (3080)
embryo 14-16hr
 (2814)
embryo 16-18hr
 (3109)
embryo 18-20hr
 (2725)
embryo 20-22hr
 (2551)
embryo 22-24hr
 (2887)
larva L1
 (689)
larva L2
 (860)
larva L3 12hr old
 (639)
larva L3 puffstage 1-2
 (525)
larva L3 puffstage 3-6
 (1090)
larva L3 puffstage 7-9
 (1752)
white prepupae new
 (2039)
white prepupae 12hr
 (2098)
white prepupae 24hr
 (1783)
pupae 2d postWPP
 (3231)
pupae 3d postWPP
 (1634)
pupae 4d postWPP
 (1364)
adult male 01day
 (1506)
adult male 05day
 (1285)
adult male 30day
 (1029)
adult female 01day
 (1382)
adult female 05day
 (1995)
adult female 30day
 (1829)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (2833)
embryo 02-04hr
 (2541)
embryo 04-06hr
 1986
embryo 06-08hr
 2470
embryo 08-10hr
 (2549)
embryo 10-12hr
 (2518)
embryo 12-14hr
 (3080)
embryo 14-16hr
 (2814)
embryo 16-18hr
 (3109)
embryo 18-20hr
 (2725)
embryo 20-22hr
 (2551)
embryo 22-24hr
 (2887)
larva L1
 
 689
larva L2
 
 860
larva L3 12hr old
 
 639
larva L3 puffstage 1-2
 
 525
larva L3 puffstage 3-6
 
 1090
larva L3 puffstage 7-9
 1752
white prepupae new
 2039
white prepupae 12hr
 2098
white prepupae 24hr
 1783
pupae 2d postWPP
 (3231)
pupae 3d postWPP
 1634
pupae 4d postWPP
 
 1364
adult male 01day
 1506
adult male 05day
 
 1285
adult male 30day
 
 1029
adult female 01day
 
 1382
adult female 05day
 1995
adult female 30day
 1829
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 2833
embryo 02-04hr
 
 2541
embryo 04-06hr
 
 1986
embryo 06-08hr
 
 2470
embryo 08-10hr
 
 2549
embryo 10-12hr
 
 2518
embryo 12-14hr
 
 3080
embryo 14-16hr
 
 2814
embryo 16-18hr
 
 3109
embryo 18-20hr
 
 2725
embryo 20-22hr
 
 2551
embryo 22-24hr
 
 2887
larva L1
 
 689
larva L2
 
 860
larva L3 12hr old
 
 639
larva L3 puffstage 1-2
 
 525
larva L3 puffstage 3-6
 
 1090
larva L3 puffstage 7-9
 
 1752
white prepupae new
 
 2039
white prepupae 12hr
 
 2098
white prepupae 24hr
 
 1783
pupae 2d postWPP
 
 3231
pupae 3d postWPP
 
 1634
pupae 4d postWPP
 
 1364
adult male 01day
 
 1506
adult male 05day
 
 1285
adult male 30day
 
 1029
adult female 01day
 
 1382
adult female 05day
 
 1995
adult female 30day
 
 1829
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 2833
embryo 02-04hr
 
 2541
embryo 04-06hr
 
 1986
embryo 06-08hr
 
 2470
embryo 08-10hr
 
 2549
embryo 10-12hr
 
 2518
embryo 12-14hr
 
 3080
embryo 14-16hr
 
 2814
embryo 16-18hr
 
 3109
embryo 18-20hr
 
 2725
embryo 20-22hr
 
 2551
embryo 22-24hr
 
 2887
larva L1
 
 689
larva L2
 
 860
larva L3 12hr old
 
 639
larva L3 puffstage 1-2
 
 525
larva L3 puffstage 3-6
 
 1090
larva L3 puffstage 7-9
 
 1752
white prepupae new
 
 2039
white prepupae 12hr
 
 2098
white prepupae 24hr
 
 1783
pupae 2d postWPP
 
 3231
pupae 3d postWPP
 
 1634
pupae 4d postWPP
 
 1364
adult male 01day
 
 1506
adult male 05day
 
 1285
adult male 30day
 
 1029
adult female 01day
 
 1382
adult female 05day
 
 1995
adult female 30day
 
 1829
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0013718


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0013718
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression in all larval and adult organs/tissues ranges from low to undetected. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult hindgut, adult heart, larval fat body, adult salivary gland, larval trachea, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system, larval/adult midgut, larval/adult Malpighian tubules, adult fat body, larval salivary gland, adult female reproductive system, adult male reproductive system.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Heatmap
Tissue   Expression Level
Larval Central Nervous System no informative data
Larval Midgut no informative data
Larval Hindgut no informative data
Larval Malpighian Tubules no informative data
Larval Fat Body no informative data
Larval Salivary Gland no informative data
Larval Trachea no informative data
Larval Carcass no informative data
Adult Head no informative data
Adult Eye no informative data
Adult Brain no informative data
Adult Thoracic-Abdominal Ganglion no informative data
Adult Crop no informative data
Adult Midgut no informative data
Adult Hindgut no informative data
Adult Malpighian Tubules no informative data
Adult Fat Body no informative data
Adult Salivary Gland no informative data
Adult Heart no informative data
Adult VirginFemale Spermatheca no informative data
Adult InseminatedFemale Spermatheca no informative data
Adult Ovary no informative data
Adult Testis no informative data
Adult Male Accessory Gland no informative data
Adult Carcass no informative data

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
anterior fascicle & synapse, with Scer\GAL4elav-C155
anterior fascicle & synapse | supernumerary, with Scer\GAL4elav-C155
hide Classical Alleles ( 29 )
For All Classical Alleles Show

Allele of nufClassMutagenStocksKnown lesion
nufe035682 --
nufKG023052 --
nuf5-SZ-3064
1 --
nufc044521 --
nufCB-5139-3
1 --
nufCB-6699-3
1 --
nufd076611 --
nufDG10303
1 --
nufe002171 --
nufe013271 --
nufe035211 --
nufEY075641 --
nuff025441 --
nuff06781
1 --
nufGS9035
1 Yes
nufKG003141 --
nufKG076461 --
nufKG086061 --
nufMB09772
1 --
nuf1loss of function allele0 --
nuf2loss of function allele0 --
nuf5-HA-1991
0 --
nufBG021800 Yes
nufCy3-230 Yes
nufEP3-1715
0 --
nufEP30770 Yes
nufEP33240 Yes
nufEP33390 Yes
nufunspecified
0 --
hide Alleles Carried on Transgenic Constructs ( 9 )
For All Alleles Carried on Transgenic Constructs Show

Allele of nufClassMutagenStocksKnown lesion
nufGD108002 Yes
nufGD123091 Yes
nufJF013501 Yes
nufJF013511 Yes
nufJF027281 Yes
nufKK1060201 Yes
nufGerm.100 Yes
nufKK1082670 Yes
nufT:Avic\GFP0 Yes
hide Aneuploid Aberrations
Disrupted in
Duplicated in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
characterization construct
Insertions
Type of insertions
Name
Expression data
insertion of enhancer trap
insertion of enhancer trap binary system
hide Gene Ontology: Function, Process & Cellular Component ( 9 unique terms )
hide Terms Based on Experimental Evidence ( 5 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
Cellular Component
CV term
References
colocalizes_with
centrosome
inferred from direct assay
hide Terms Based on Predictions or Assertions ( 5 terms )
Molecular Function
CV term
References
inferred from sequence or structural similarity
Biological Process
CV term
References
inferred from sequence or structural similarity
Cellular Component
CV term
References
traceable author statement
inferred from sequence or structural similarity
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
nuf allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 28 )
Harvard
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 168 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
hide Antibody Information
hide Other Information
hide Discoverer
hide Etymology
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for identity of: nuf CG7867
Source for database merge of
Source for merge of: nuf CIP-D2 anon-D2
Source for merge of: nuf EP3077
Additional comments
Source for merge of nuf EP3077 was location of EP3077 insertion (date:020218).
hide Other Comments
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
New annotation (CG32140) in release 3 of the genome annotation.
The nuf-mutant phenotype is used to investigate the process by which a furrow is constructed.
Protein interacts specifically with csw unique catalytic insert domain.
Identification: Yeast two hybrid screen for proteins that interact with the csw protein's protein phosphatase domain.
nuf gene product has a zinc finger motif.
Deficiency analysis localized nuf to 70D2-70D6.
Defined in a screen of maternal-effect lethal mutations that cause defects in nuclear movement, organization or morphology during the syncytial embryonic divisions.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 20 )
Reported As
Symbol Synonym
EP3077
 
Name Synonym
Corkscrew Interacting Protein-D2
Nuclear Fallout
Secondary FlyBase IDs
  • FBgn0013768
  • FBgn0015626
  • FBgn0024703
  • FBgn0044464
  • FBgn0052140
  • FBgn0053991
  • FBpp0075474
  • FBpp0075475
  • FBpp0075476
  • FBpp0075480
  • FBpp0075481
  • FBpp0089174
  • FBtr0075731
  • FBtr0075732
  • FBtr0075733
  • FBtr0075734
  • FBtr0075738
  • FBtr0075739
hide References ( 95 )
Generate a list of
List References by type
hide Recent research papers ( 6 )
Carreira et al., 2011, BMC Dev. Biol. 11: 32
Genetic basis of wing morphogenesis in Drosophila: sexual dimorphism and non-allometric effects of shape variation. [FBrf0214273]
Hoskins et al., 2011, Genome Res. 21(2): 182--192
Genome-wide analysis of promoter architecture in Drosophila melanogaster. [FBrf0213090]
Otani et al., 2011, Dev. Cell 20(2): 219--232
IKKɛ Regulates Cell Elongation through Recycling Endosome Shuttling. [FBrf0212985]
Karbowniczek et al., 2010, J. clin. Invest. 120(1): 93--102
The evolutionarily conserved TSC/Rheb pathway activates Notch in tuberous sclerosis complex and Drosophila external sensory organ development. [FBrf0209596]
Reis et al., 2010, PLoS Genet. 6(11): e1001206
A buoyancy-based screen of Drosophila larvae for fat-storage mutants reveals a role for sir2 in coupling fat storage to nutrient availability. [FBrf0212335]
Sommi et al., 2010, J. Cell Sci. 123(11): 1862--1872
A mitotic kinesin-6, Pav-KLP, mediates interdependent cortical reorganization and spindle dynamics in Drosophila embryos. [FBrf0210830]
hide Recent reviews (0)
All reviews listed in FlyBase were published before 2010