A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\imd

General Information
SymbolDmel\imdSpeciesD. melanogaster
Nameimmune deficiencyAnnotation symbolCG5576
Feature typeprotein_coding_geneFlyBase IDFBgn0013983
Gene Model StatusCurrent Stock availability 11 publicly available
Also Known AsBG5
Genomic Location
Chromosome (arm)2RRecombination map2-
Cytogenetic map55C8-55C8Sequence location2R:14,297,296..14,299,024 [-]

Genomic Maps

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modENCODE GBrowse
detailed view
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Automatically generated summary

See sections below for more information
The gene immune deficiency is referred to in FlyBase by the symbol Dmel\imd (CG5576, FBgn0013983). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: death domain binding; protein binding. There is experimental evidence that it is involved in the biological process: immune response; response to bacterium; humoral immune response; positive regulation of innate immune response; nervous system development; positive regulation of antibacterial peptide biosynthetic process; antimicrobial humoral response; peptidoglycan recognition protein signaling pathway; antibacterial humoral response. 30 alleles are reported. The phenotype of these alleles is annotated with: embryonic/larval fat body. It has one annotated transcript and one annotated polypeptide. Protein features are: DEATH-like; Death. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 06-12 hour embryonic stages, during late larval stages, during early pupal stages. Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. Comments on Affy2 ProbeSet: ProbeSet 1637332_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of imd. Gene sequence location is 2R:14297296..14299024.

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Description
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FB2011_10
References
FB2012_01
Alleles
Insertions
Sequence features
References
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
55C8-55C8  
Limits computationally determined from genome sequence between P{PZ}sbb04525&P{EP}EP1081EP1081 and P{lacW}l(2)08770k04808  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\imd for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0086676 FBtr0086677 FBtr0086725 FBtr0086678 FBtr0086682 FBtr0086683 FBtr0086679 FBtr0086680 FBtr0086681 FBpp0085857 FBpp0085858 FBpp0085904 FBti0075884 FBti0075121 FBti0042157 FBti0145373 FBti0034253 FBti0038837 FBti0035017 FBti0100077 FBti0017614 FBti0036894 FBti0103856 FBti0028874 FBti0018553 FBti0109560 FBti0077004 FBti0026376 FBti0010973 FBti0102218
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0086725
  1312
  273
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
imd-PA  
FBpp0085904  
29.9  
273  
6.16  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Death (IPR000488)
DEATH-like (IPR011029)
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view GstE9-RA imd-RA Dp1-RA Dp1-RB Dp1-RC Dp1-RD
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0013983


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0013983
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 06-12 hour embryonic stages, during late larval stages, during early pupal stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0013983 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 911
embryo 02-04hr
 
 548
embryo 04-06hr
 
 961
embryo 06-08hr
 
 1509
embryo 08-10hr
 
 1486
embryo 10-12hr
 
 1720
embryo 12-14hr
 
 1318
embryo 14-16hr
 
 1232
embryo 16-18hr
 
 1187
embryo 18-20hr
 
 1087
embryo 20-22hr
 
 931
embryo 22-24hr
 
 779
larva L1
 
 804
larva L2
 
 863
larva L3 12hr old
 
 814
larva L3 puffstage 1-2
 
 840
larva L3 puffstage 3-6
 
 1143
larva L3 puffstage 7-9
 
 1843
white prepupae new
 
 2174
white prepupae 12hr
 
 1773
white prepupae 24hr
 
 1329
pupae 2d postWPP
 
 1047
pupae 3d postWPP
 
 712
pupae 4d postWPP
 
 661
adult male 01day
 
 806
adult male 05day
 
 838
adult male 30day
 
 755
adult female 01day
 
 800
adult female 05day
 
 870
adult female 30day
 
 851
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (911)
embryo 02-04hr
 (548)
embryo 04-06hr
 (961)
embryo 06-08hr
 (1509)
embryo 08-10hr
 (1486)
embryo 10-12hr
 (1720)
embryo 12-14hr
 (1318)
embryo 14-16hr
 (1232)
embryo 16-18hr
 (1187)
embryo 18-20hr
 (1087)
embryo 20-22hr
 (931)
embryo 22-24hr
 (779)
larva L1
 (804)
larva L2
 (863)
larva L3 12hr old
 (814)
larva L3 puffstage 1-2
 (840)
larva L3 puffstage 3-6
 (1143)
larva L3 puffstage 7-9
 (1843)
white prepupae new
 (2174)
white prepupae 12hr
 (1773)
white prepupae 24hr
 (1329)
pupae 2d postWPP
 (1047)
pupae 3d postWPP
 (712)
pupae 4d postWPP
 (661)
adult male 01day
 (806)
adult male 05day
 (838)
adult male 30day
 (755)
adult female 01day
 (800)
adult female 05day
 (870)
adult female 30day
 (851)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 911
embryo 02-04hr
 
 548
embryo 04-06hr
 
 961
embryo 06-08hr
 1509
embryo 08-10hr
 1486
embryo 10-12hr
 (1720)
embryo 12-14hr
 
 1318
embryo 14-16hr
 
 1232
embryo 16-18hr
 
 1187
embryo 18-20hr
 
 1087
embryo 20-22hr
 
 931
embryo 22-24hr
 
 779
larva L1
 
 804
larva L2
 
 863
larva L3 12hr old
 
 814
larva L3 puffstage 1-2
 
 840
larva L3 puffstage 3-6
 
 1143
larva L3 puffstage 7-9
 (1843)
white prepupae new
 (2174)
white prepupae 12hr
 (1773)
white prepupae 24hr
 
 1329
pupae 2d postWPP
 
 1047
pupae 3d postWPP
 
 712
pupae 4d postWPP
 
 661
adult male 01day
 
 806
adult male 05day
 
 838
adult male 30day
 
 755
adult female 01day
 
 800
adult female 05day
 
 870
adult female 30day
 
 851
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 911
embryo 02-04hr
 
 548
embryo 04-06hr
 
 961
embryo 06-08hr
 
 1509
embryo 08-10hr
 
 1486
embryo 10-12hr
 
 1720
embryo 12-14hr
 
 1318
embryo 14-16hr
 
 1232
embryo 16-18hr
 
 1187
embryo 18-20hr
 
 1087
embryo 20-22hr
 
 931
embryo 22-24hr
 
 779
larva L1
 
 804
larva L2
 
 863
larva L3 12hr old
 
 814
larva L3 puffstage 1-2
 
 840
larva L3 puffstage 3-6
 
 1143
larva L3 puffstage 7-9
 
 1843
white prepupae new
 
 2174
white prepupae 12hr
 
 1773
white prepupae 24hr
 
 1329
pupae 2d postWPP
 
 1047
pupae 3d postWPP
 
 712
pupae 4d postWPP
 
 661
adult male 01day
 
 806
adult male 05day
 
 838
adult male 30day
 
 755
adult female 01day
 
 800
adult female 05day
 
 870
adult female 30day
 
 851
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 911
embryo 02-04hr
 
 548
embryo 04-06hr
 
 961
embryo 06-08hr
 
 1509
embryo 08-10hr
 
 1486
embryo 10-12hr
 
 1720
embryo 12-14hr
 
 1318
embryo 14-16hr
 
 1232
embryo 16-18hr
 
 1187
embryo 18-20hr
 
 1087
embryo 20-22hr
 
 931
embryo 22-24hr
 
 779
larva L1
 
 804
larva L2
 
 863
larva L3 12hr old
 
 814
larva L3 puffstage 1-2
 
 840
larva L3 puffstage 3-6
 
 1143
larva L3 puffstage 7-9
 
 1843
white prepupae new
 
 2174
white prepupae 12hr
 
 1773
white prepupae 24hr
 
 1329
pupae 2d postWPP
 
 1047
pupae 3d postWPP
 
 712
pupae 4d postWPP
 
 661
adult male 01day
 
 806
adult male 05day
 
 838
adult male 30day
 
 755
adult female 01day
 
 800
adult female 05day
 
 870
adult female 30day
 
 851
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0013983 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 911
embryo 02-04hr
 
 548
embryo 04-06hr
 
 961
embryo 06-08hr
 
 1509
embryo 08-10hr
 
 1486
embryo 10-12hr
 
 1720
embryo 12-14hr
 
 1318
embryo 14-16hr
 
 1232
embryo 16-18hr
 
 1187
embryo 18-20hr
 
 1087
embryo 20-22hr
 
 931
embryo 22-24hr
 
 779
larva L1
 
 804
larva L2
 
 863
larva L3 12hr old
 
 814
larva L3 puffstage 1-2
 
 840
larva L3 puffstage 3-6
 
 1143
larva L3 puffstage 7-9
 
 1843
white prepupae new
 
 2174
white prepupae 12hr
 
 1773
white prepupae 24hr
 
 1329
pupae 2d postWPP
 
 1047
pupae 3d postWPP
 
 712
pupae 4d postWPP
 
 661
adult male 01day
 
 806
adult male 05day
 
 838
adult male 30day
 
 755
adult female 01day
 
 800
adult female 05day
 
 870
adult female 30day
 
 851
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (911)
embryo 02-04hr
 (548)
embryo 04-06hr
 (961)
embryo 06-08hr
 (1509)
embryo 08-10hr
 (1486)
embryo 10-12hr
 (1720)
embryo 12-14hr
 (1318)
embryo 14-16hr
 (1232)
embryo 16-18hr
 (1187)
embryo 18-20hr
 (1087)
embryo 20-22hr
 (931)
embryo 22-24hr
 (779)
larva L1
 (804)
larva L2
 (863)
larva L3 12hr old
 (814)
larva L3 puffstage 1-2
 (840)
larva L3 puffstage 3-6
 (1143)
larva L3 puffstage 7-9
 (1843)
white prepupae new
 (2174)
white prepupae 12hr
 (1773)
white prepupae 24hr
 (1329)
pupae 2d postWPP
 (1047)
pupae 3d postWPP
 (712)
pupae 4d postWPP
 (661)
adult male 01day
 (806)
adult male 05day
 (838)
adult male 30day
 (755)
adult female 01day
 (800)
adult female 05day
 (870)
adult female 30day
 (851)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 911
embryo 02-04hr
 
 548
embryo 04-06hr
 
 961
embryo 06-08hr
 1509
embryo 08-10hr
 1486
embryo 10-12hr
 1720
embryo 12-14hr
 
 1318
embryo 14-16hr
 
 1232
embryo 16-18hr
 
 1187
embryo 18-20hr
 
 1087
embryo 20-22hr
 
 931
embryo 22-24hr
 
 779
larva L1
 
 804
larva L2
 
 863
larva L3 12hr old
 
 814
larva L3 puffstage 1-2
 
 840
larva L3 puffstage 3-6
 
 1143
larva L3 puffstage 7-9
 1843
white prepupae new
 2174
white prepupae 12hr
 1773
white prepupae 24hr
 
 1329
pupae 2d postWPP
 
 1047
pupae 3d postWPP
 
 712
pupae 4d postWPP
 
 661
adult male 01day
 
 806
adult male 05day
 
 838
adult male 30day
 
 755
adult female 01day
 
 800
adult female 05day
 
 870
adult female 30day
 
 851
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 911
embryo 02-04hr
 
 548
embryo 04-06hr
 
 961
embryo 06-08hr
 
 1509
embryo 08-10hr
 
 1486
embryo 10-12hr
 
 1720
embryo 12-14hr
 
 1318
embryo 14-16hr
 
 1232
embryo 16-18hr
 
 1187
embryo 18-20hr
 
 1087
embryo 20-22hr
 
 931
embryo 22-24hr
 
 779
larva L1
 
 804
larva L2
 
 863
larva L3 12hr old
 
 814
larva L3 puffstage 1-2
 
 840
larva L3 puffstage 3-6
 
 1143
larva L3 puffstage 7-9
 
 1843
white prepupae new
 
 2174
white prepupae 12hr
 
 1773
white prepupae 24hr
 
 1329
pupae 2d postWPP
 
 1047
pupae 3d postWPP
 
 712
pupae 4d postWPP
 
 661
adult male 01day
 
 806
adult male 05day
 
 838
adult male 30day
 
 755
adult female 01day
 
 800
adult female 05day
 
 870
adult female 30day
 
 851
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 911
embryo 02-04hr
 
 548
embryo 04-06hr
 
 961
embryo 06-08hr
 
 1509
embryo 08-10hr
 
 1486
embryo 10-12hr
 
 1720
embryo 12-14hr
 
 1318
embryo 14-16hr
 
 1232
embryo 16-18hr
 
 1187
embryo 18-20hr
 
 1087
embryo 20-22hr
 
 931
embryo 22-24hr
 
 779
larva L1
 
 804
larva L2
 
 863
larva L3 12hr old
 
 814
larva L3 puffstage 1-2
 
 840
larva L3 puffstage 3-6
 
 1143
larva L3 puffstage 7-9
 
 1843
white prepupae new
 
 2174
white prepupae 12hr
 
 1773
white prepupae 24hr
 
 1329
pupae 2d postWPP
 
 1047
pupae 3d postWPP
 
 712
pupae 4d postWPP
 
 661
adult male 01day
 
 806
adult male 05day
 
 838
adult male 30day
 
 755
adult female 01day
 
 800
adult female 05day
 
 870
adult female 30day
 
 851
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0013983


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0013983
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0013983 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 27.45
Larval Midgut no informative data
Larval Hindgut
 
 40.7
Larval Malpighian Tubules
 
 81.6
Larval Fat Body
 
 78.6
Larval Salivary Gland no informative data
Larval Trachea
 
 52.975
Larval Carcass
 
 42.825
Adult Head
 
 56.6
Adult Eye
 
 44.525
Adult Brain
 
 29
Adult Thoracic-Abdominal Ganglion
 
 29.8
Adult Crop
 
 56.5
Adult Midgut
 
 54.2
Adult Hindgut
 
 45.7
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 71
Adult Salivary Gland
 
 46.5
Adult Heart
 
 63.2
Adult VirginFemale Spermatheca
 
 98.3
Adult InseminatedFemale Spermatheca
 
 77.7
Adult Ovary
 
 43.8
Adult Testis
 
 36.6
Adult Male Accessory Gland
 
 40.4
Adult Carcass
 
 49.3
Expression Level Scale
 None 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 27.45
Larval Midgut no informative data
Larval Hindgut
 
 40.7
Larval Malpighian Tubules
 
 81.6
Larval Fat Body
 
 78.6
Larval Salivary Gland no informative data
Larval Trachea
 
 52.975
Larval Carcass
 
 42.825
Adult Head
 
 56.6
Adult Eye
 
 44.525
Adult Brain
 
 29
Adult Thoracic-Abdominal Ganglion
 
 29.8
Adult Crop
 
 56.5
Adult Midgut
 
 54.2
Adult Hindgut
 
 45.7
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 71
Adult Salivary Gland
 
 46.5
Adult Heart
 
 63.2
Adult VirginFemale Spermatheca
 
 98.3
Adult InseminatedFemale Spermatheca
 
 77.7
Adult Ovary
 
 43.8
Adult Testis
 
 36.6
Adult Male Accessory Gland
 
 40.4
Adult Carcass
 
 49.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 27.45
Larval Midgut no informative data
Larval Hindgut
 
 40.7
Larval Malpighian Tubules
 
 81.6
Larval Fat Body
 
 78.6
Larval Salivary Gland no informative data
Larval Trachea
 
 52.975
Larval Carcass
 
 42.825
Adult Head
 
 56.6
Adult Eye
 
 44.525
Adult Brain
 
 29
Adult Thoracic-Abdominal Ganglion
 
 29.8
Adult Crop
 
 56.5
Adult Midgut
 
 54.2
Adult Hindgut
 
 45.7
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 71
Adult Salivary Gland
 
 46.5
Adult Heart
 
 63.2
Adult VirginFemale Spermatheca
 
 98.3
Adult InseminatedFemale Spermatheca
 
 77.7
Adult Ovary
 
 43.8
Adult Testis
 
 36.6
Adult Male Accessory Gland
 
 40.4
Adult Carcass
 
 49.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 27.45
Larval Midgut no informative data
Larval Hindgut
 
 40.7
Larval Malpighian Tubules
 
 81.6
Larval Fat Body
 
 78.6
Larval Salivary Gland no informative data
Larval Trachea
 
 52.975
Larval Carcass
 
 42.825
Adult Head
 
 56.6
Adult Eye
 
 44.525
Adult Brain
 
 29
Adult Thoracic-Abdominal Ganglion
 
 29.8
Adult Crop
 
 56.5
Adult Midgut
 
 54.2
Adult Hindgut
 
 45.7
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 71
Adult Salivary Gland
 
 46.5
Adult Heart
 
 63.2
Adult VirginFemale Spermatheca
 
 98.3
Adult InseminatedFemale Spermatheca
 
 77.7
Adult Ovary
 
 43.8
Adult Testis
 
 36.6
Adult Male Accessory Gland
 
 40.4
Adult Carcass
 
 49.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0013983 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 27.45
Larval Midgut no informative data
Larval Hindgut
 
 40.7
Larval Malpighian Tubules
 
 81.6
Larval Fat Body
 
 78.6
Larval Salivary Gland no informative data
Larval Trachea
 
 52.975
Larval Carcass
 
 42.825
Adult Head
 
 56.6
Adult Eye
 
 44.525
Adult Brain
 
 29
Adult Thoracic-Abdominal Ganglion
 
 29.8
Adult Crop
 
 56.5
Adult Midgut
 
 54.2
Adult Hindgut
 
 45.7
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 71
Adult Salivary Gland
 
 46.5
Adult Heart
 
 63.2
Adult VirginFemale Spermatheca
 
 98.3
Adult InseminatedFemale Spermatheca
 
 77.7
Adult Ovary
 
 43.8
Adult Testis
 
 36.6
Adult Male Accessory Gland
 
 40.4
Adult Carcass
 
 49.3
Expression Level Scale
 None 
 Low 
 Moderate 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 27.45
Larval Midgut no informative data
Larval Hindgut
 
 40.7
Larval Malpighian Tubules
 
 81.6
Larval Fat Body
 
 78.6
Larval Salivary Gland no informative data
Larval Trachea
 
 52.975
Larval Carcass
 
 42.825
Adult Head
 
 56.6
Adult Eye
 
 44.525
Adult Brain
 
 29
Adult Thoracic-Abdominal Ganglion
 
 29.8
Adult Crop
 
 56.5
Adult Midgut
 
 54.2
Adult Hindgut
 
 45.7
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 71
Adult Salivary Gland
 
 46.5
Adult Heart
 
 63.2
Adult VirginFemale Spermatheca
 
 98.3
Adult InseminatedFemale Spermatheca
 
 77.7
Adult Ovary
 
 43.8
Adult Testis
 
 36.6
Adult Male Accessory Gland
 
 40.4
Adult Carcass
 
 49.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 27.45
Larval Midgut no informative data
Larval Hindgut
 
 40.7
Larval Malpighian Tubules
 
 81.6
Larval Fat Body
 
 78.6
Larval Salivary Gland no informative data
Larval Trachea
 
 52.975
Larval Carcass
 
 42.825
Adult Head
 
 56.6
Adult Eye
 
 44.525
Adult Brain
 
 29
Adult Thoracic-Abdominal Ganglion
 
 29.8
Adult Crop
 
 56.5
Adult Midgut
 
 54.2
Adult Hindgut
 
 45.7
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 71
Adult Salivary Gland
 
 46.5
Adult Heart
 
 63.2
Adult VirginFemale Spermatheca
 
 98.3
Adult InseminatedFemale Spermatheca
 
 77.7
Adult Ovary
 
 43.8
Adult Testis
 
 36.6
Adult Male Accessory Gland
 
 40.4
Adult Carcass
 
 49.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 27.45
Larval Midgut no informative data
Larval Hindgut
 
 40.7
Larval Malpighian Tubules
 
 81.6
Larval Fat Body
 
 78.6
Larval Salivary Gland no informative data
Larval Trachea
 
 52.975
Larval Carcass
 
 42.825
Adult Head
 
 56.6
Adult Eye
 
 44.525
Adult Brain
 
 29
Adult Thoracic-Abdominal Ganglion
 
 29.8
Adult Crop
 
 56.5
Adult Midgut
 
 54.2
Adult Hindgut
 
 45.7
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 71
Adult Salivary Gland
 
 46.5
Adult Heart
 
 63.2
Adult VirginFemale Spermatheca
 
 98.3
Adult InseminatedFemale Spermatheca
 
 77.7
Adult Ovary
 
 43.8
Adult Testis
 
 36.6
Adult Male Accessory Gland
 
 40.4
Adult Carcass
 
 49.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut no informative data
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland no informative data
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 56.6
 
NA 
Eye
 
 44.525
 
NA 
Brain
 
 29
 
27.45 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 29.8
 
NA 
Crop
 
 56.5
 
no informative data 
Midgut
 
 54.2
 
40.7 
Hindgut
 
 45.7
 
81.6 
Malpighian Tubules
 
 no informative data
 
78.6 
Fat Body
 
 71
 
no informative data 
Salivary Gland
 
 46.5
 
NA 
Heart
 
 63.2
 
52.975 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 98.3
 
NA 
InseminatedFemale Spermatheca
 
 77.7
 
NA 
Ovary
 
 43.8
 
NA 
Testis
 
 36.6
 
NA 
Male Accessory Gland
 
 40.4
 
42.825 
Carcass
 
 49.3

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
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A cluster of genes with similar mRNA expression dynamics across development.
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hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
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Allele
Sterility
Allele
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Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 18 )
For All Classical Alleles Show

Allele of imdClassMutagenStocksKnown lesion
imdf027462 --
imdBG022881 Yes
imdCB-6101-3
1 --
imdEY085731 --
imdGS9049
1 Yes
imdNP1182
1 --
imdNP2717
1 --
imdNP6275
1 --
imd10191
0 --
imd1hypomorphic allele - genetic evidence
0 Yes
imdBG01405b0 Yes
imdCB03754
0 --
imdEP22490 Yes
imdMI03451
0 --
imdR156hypomorphic allele - genetic evidence
0 --
imdSDK
0 --
imdshadokloss of function allele
0 --
imdunspecified
0 --
hide Alleles Carried on Transgenic Constructs ( 12 )
For All Alleles Carried on Transgenic Constructs Show

Allele of imdClassMutagenStocksKnown lesion
imdGD12841 Yes
imdKK1098631 Yes
imd+t5.10 Yes
imd1.Act5C.T:Hsap\MYC,T:Ivir\HA10 Yes
imdAct5C.T:Hsap\MYC,T:Ivir\HA10 Yes
imdD30A.Scer\UAS0 Yes
imdMtnA.T:SV5\V5,T:Hsap\MYC0 Yes
imdMtnA.T:Zzzz\FLAG0 Yes
imdScer\UAS.cGa0 Yes
imdΔ1-135.MtnA.T:SV5\V5,T:Hsap\MYC0 Yes
imdΔ136-273.MtnA.T:SV5\V5,T:Hsap\MYC0 Yes
imdΔ173-273.MtnA.T:SV5\V5,T:Hsap\MYC0 Yes
hide Aneuploid Aberrations
Disrupted in
Not disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
characterization construct
Insertions
Type of insertions
Name
Expression data
insertion of mobile activating element
insertion of enhancer trap
insertion of enhancer trap binary system
hide Gene Ontology: Function, Process & Cellular Component ( 18 unique terms )
hide Terms Based on Experimental Evidence ( 11 terms )
Molecular Function
CV term
References
inferred from physical interaction with BG4
inferred from physical interaction with pirk
Biological Process
CV term
References
inferred from genetic interaction with Tl
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
Cellular Component ( 0 terms)
hide Terms Based on Predictions or Assertions ( 8 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
non-traceable author statement
traceable author statement
non-traceable author statement
non-traceable author statement
non-traceable author statement
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CV term
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non-traceable author statement
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Interacts with
Please look at the allele data for full details of the genetic interactions
imd allele
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BioGRID - A database of protein and genetic interactions
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InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
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InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
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hide Stocks Listed in FlyBase ( 11 )
Bloomington
Harvard
Kyoto
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 12 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
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cDNA Clones, End Sequenced (ESTs)
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Source for database identity of
Source for identity of: BG5 CG5576
Source for identity of: imd shadok
Source for database merge of
Source for merge of: imd anon-WO0172774.166
Source for merge of: imd BG5
Additional comments
Source for merge of imd anon-WO0172774.166 was sequence comparison (date:051113).
Source for identity of BG5 CG5576 was sequence comparison (date:000327).
hide Other Comments
RNAi screen using dsRNA made from templates generated with primers directed against this gene causes a specific decrease in AttA activity in response to heat-killed E.coli when assayed in S2 cells. imd functions upstream of Iap2 in the fat body, as shown by the ability of Iap2 dsRNA to inhibit transcriptional activation of Dpt by imd.
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
imd regulates the antibacterial response.
Mutants show no detectable induction of Dpt, CecA1 and CecA2. Attacin levels are reduced compared to wild type and Drs induction is normal.
Identified as a gene with significant level of mRNA cycling as assessed by expression analysis using high density oligonucleotide arrays with probe generated from adult heads harvested over six time points over the course of a day.
Mutants exhibit a constitutive Dif nuclear localisation.
Mutations that affect the synthesis of antimicrobial peptides dramatically lower the resistance of flies to infection.
The imd locus was identified by a mutation which abrogates (in larvae) or reduces (in adults) the induction of humoral immune response genes. Failure of induction results in mortality due to sepsis after challenge with live bacteria.
When challenged with bacteria mutants show a lower survival rate that wild type flies. In contrast to the antibacterial peptides the antifungal peptide Drs remains inducible in a homozygous imd mutant background. These results point to the existance of two different pathways leading to the expression of two types of target genes, encoding either the antibacterial peptides or the antifungal peptide Drs.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Death (IPR000488)
DEATH-like (IPR011029)
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
FlyReactome - A curated knowledgebase of Drosophila melanogaster pathways
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 12 )
Reported As
Symbol Synonym
anon-WO0172774.166
 
Name Synonym
Immune deficiency
immune deficient
Immunodeficiency
Secondary FlyBase IDs
  • FBgn0034344
  • FBgn0046434
hide References ( 205 )
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hide Recent research papers ( 15 )
Chang et al., 2012, Dev. Comp. Immunol. 36(2): 274--278
Loss of Hemolectin reduces the survival of Drosophila larvae after wounding. [FBrf0216558]
Douglas et al., 2011, Proc. Biol. Sci. 278(1704): 333--338
How the insect immune system interacts with an obligate symbiotic bacterium. [FBrf0212672]
Galac and Lazzaro, 2011, Microbes Infect. 13(7): 673--683
Comparative pathology of bacteria in the genus Providencia to a natural host, Drosophila melanogaster. [FBrf0214338]
Glittenberg et al., 2011, Dis. Model Mech. 4(4): 515--525
Pathogen and host factors are needed to provoke a systemic host response to gastrointestinal infection of Drosophila larvae by Candida albicans. [FBrf0214008]
Guntermann and Foley, 2011, J. Biol. Chem. 286(35): 30284--30294
The Protein Dredd Is an Essential Component of the c-Jun N-terminal Kinase Pathway in the Drosophila Immune Response. [FBrf0214801]
Herren and Lemaitre, 2011, Cell. Microbiol. 13(9): 1385--1396
Spiroplasma and host immunity: activation of humoral immune responses increases endosymbiont load and susceptibility to certain Gram-negative bacterial pathogens in Drosophila melanogaster. [FBrf0214693]
Morozova et al., 2011, Genetics 187(4): 1193--1205
Transcriptional networks for alcohol sensitivity in Drosophila melanogaster. [FBrf0214377]
Chen et al., 2010, Proc. Natl. Acad. Sci. U.S.A. 107(48): 20774--20779
Participation of the p38 pathway in Drosophila host defense against pathogenic bacteria and fungi. [FBrf0212390]
Junell et al., 2010, Mol. Cell. Biol. 30(14): 3672--3684
The POU transcription factor Drifter/Ventral veinless regulates expression of Drosophila immune defense genes. [FBrf0211117]
Kim et al., 2010, Exp. Gerontol. 45(12): 984--987
Enhancement of stress resistances and downregulation of Imd pathway by lower developmental temperature in Drosophila melanogaster. [FBrf0212401]
Kong et al., 2010, Alcoholism, Clin. Exp. Res. 34(2): 302--316
Ethanol-regulated genes that contribute to ethanol sensitivity and rapid tolerance in Drosophila. [FBrf0209720]
Paquette et al., 2010, Mol. Cell 37(2): 172--182
Caspase-Mediated Cleavage, IAP Binding, and Ubiquitination: Linking Three Mechanisms Crucial for Drosophila NF-kappaB Signaling. [FBrf0209837]
Tang et al., 2010, Proc. Natl. Acad. Sci. U.S.A. 107(29): 12935--12940
Adverse interactions between micro-RNAs and target genes from different species. [FBrf0211343]
Tanji et al., 2010, Proc. Natl. Acad. Sci. U.S.A. 107(33): 14715--14720
Heterodimers of NF-{kappa}B transcription factors DIF and Relish regulate antimicrobial peptide genes in Drosophila. [FBrf0211616]
Valanne et al., 2010, J. Immunol. 184(11): 6188--6198
Genome-wide RNA interference in Drosophila cells identifies G protein-coupled receptor kinase 2 as a conserved regulator of NF-kappaB signaling. [FBrf0210846]
hide Recent reviews (0)
All reviews listed in FlyBase were published before 2010