Gene Dmel\Oda

General Information
Symbol	Dmel\Oda	Species	D. melanogaster
Name	Ornithine decarboxylase antizyme	Annotation symbol	CG16747
Feature type	protein_coding_gene	FlyBase ID	FBgn0014184
Created / Updated	2003-12-02/2003-12-02
Genomic Location
Chromosome (arm)	2R	Recombination map
Cytogenetic map	48E4-48E4	Sequence location	2R:8,054,077..8,061,767 [-]
Map ( GBrowse )
Summary Information
Automatically generated summary See sections below for more information	The gene Ornithine decarboxylase antizyme is referred to in FlyBase by the symbol Oda (CG16747, FBgn0014184). It has the cytological map location 48E4. Its sequence location is 2R:8054077..8061767. Its molecular function is described as ornithine decarboxylase inhibitor activity. It is involved in the biological process cell differentiation. 21 alleles are reported. The phenotypes of these alleles are annotated with: larval brain; lymph gland; imaginal disc; larval salivary gland; salivary gland imaginal ring; dorsal mesothoracic disc; dorsal metathoracic disc; ventral thoracic disc. It has 3 annotated transcripts and 3 annotated polypeptides.
External Summaries

Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 48E4-48E4 Limits computationally determined from genome sequence between P{lacW}jeb^k05644 and P{PZ}SmD3⁰²⁸³³
Experimentally Determined Cytological Location
Cytogenetic map Notes References 48E-48E (Salzberg, 1995.6.19) 48E4-48E5 (determined by in situ hybridisation) (Spradling et al., 1999) 48E5-48E12 (determined by in situ hybridisation) (Salzberg et al., 1996) 48E6-48E12 (determined by in situ hybridisation) (Kania et al., 1995) 48E-48E (BDGP Project Members, 1994-1999)
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Molecular Map Data
Gene Order (in direction of increasing cytology) References Gene Order (overall orientation not stated) References Overall orientation not stated: Oda+ SmD3- Oda+ (Ivanov et al., 1998)
Gene Model & Products
Please see the GBrowse view of Dmel\Oda for information on other features
Comments on Gene Model
	An additional guf transcript form is predicted by GB:U29529. This putative transcript is not supported by any of the>300 ESTs isolated from this gene and was not included in the annotation. It has no introns and is suspected to be a genomic DNA fragment. According to GB:AF38597, +1 translational frameshifting is used at aa residue 62 to continue translation of the CDS predicted from guf-RA past a stop codon. tcc tga t is decoded as Ser-Asp; this readthrough is likely to affect all three transcripts and the CDS sequences reflect this readthrough.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Oda-RA FBtr0088013 NM_165863 1738 254 Oda-RB FBtr0088015 NM_165865 1708 248 Oda-RC FBtr0088014 NM_165864 1934 270
Additional Transcript Data & Comments
Reported size (kB)	2.1 (northern blot) (Salzberg et al., 1996) 1.8 (northern blot) (Ivanov et al., 1998)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kD) Length (aa) Theoretical pI RefSeq ID GenBank protein Oda-PA FBpp0087121 28.3 254 4.52 NP_725103 AAF58569 Oda-PB FBpp0087123 27.6 248 4.46 NP_725105 AAF58570 Oda-PC FBpp0087122 30.1 270 4.44 NP_725104 AAF58567
Additional Polypeptide Data & Comments
Reported size (kD)	254 (aa); 28 (kD predicted) (Ivanov et al., 1998) 186 (aa); 21 (kD predicted) (Salzberg et al., 1996)
Comments
External Data
Linkouts	PANTHER - Protein classification by function, families, and pathways • FBgn0014184
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Ornithine decarboxylase antizyme (IPR002993)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA201722 AA201741 AA201915 AA246413 AA246995 AA264981 AA264982 AA390375 AA390531 AA392526 AA438350 AA438731 AA440029 AA440041 AA440435 AA441085 AA539386 AA539800 AA540196 AA541053 AA695426 AA695778 AA696208 AA696210 AA696364 AA735381 AA736161 AA736185 AA802958 AA940767 AA941367 AA942427 AA949904 AA951831 AE003823 AAF58567 AE003823 AAF58569 AE003823 AAF58570 AF038597 AAC97538 AI061909 AI063600 AI063978 AI108250 AI110215 AI134872 AI135251 AI135561 AI135940 AI238530 AI238765 AI238918 AI239233 AI257098 AI258403 AI259223 AI259580 AI294617 AI295441 AI296025 AI297684 AI386508 AI388592 AI389199 AI389734 AI403861 AI405628 AI405793 AI405795 AI513707 AI517455 AI517642 AI519051 AI519385 AI546641 AQ025598 AQ025599 AQ073369 AW941028 AY069220 AAL39365 AY071071 AAL48693 AZ300928 BE977127 BF486064 BF498793 BF501960 BG637706 BI161505 BI161506 BI162251 BI162252 BI162849 BI163068 BI163420 BI163984 BI164335 BI164419 BI164661 BI164845 BI165524 BI166546 BI167175 BI167321 BI167792 BI168132 BI168852 BI169213 BI169356 BI169408 BI169784 BI169813 BI170588 BI170656 BI170929 BI171376 BI171638 BI171646 BI172007 BI172172 BI172447 BI172928 BI173768 BI212140 BI212874 BI212897 BI213057 BI213411 BI213717 BI213937 BI213953 BI214092 BI214776 BI214879 BI214904 BI215547 BI215834 BI215987 BI216098 BI216112 BI216600 BI216602 BI216725 BI227478 BI227540 BI227580 BI227780 BI227850 BI228008 BI228368 BI228469 BI228473 BI228554 BI228617 BI228792 BI228934 BI228973 BI229142 BI229262 BI229663 BI230910 BI230985 BI231162 BI231676 BI231861 BI231890 BI232434 BI232468 BI233319 BI234104 BI234575 BI235077 BI235202 BI235906 BI236602 BI236631 BI237780 BI238310 BI238345 BI238417 BI238504 BI238676 BI238868 BI238882 BI239186 BI239241 BI239271 BI239432 BI239825 BI240070 BI240825 BI240875 BI241126 BI241414 BI241492 BI241644 BI241749 BI241833 BI241945 BI242099 BI242789 BI243125 BI243597 BI243785 BI243961 BI353472