Gene Scer\UAS

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General Information

Symbol

Scer\UAS

Species

S. cerevisiae

Name

Annotation symbol

Feature type

engineered_foreign_region

FlyBase ID

FBgn0015319

Gene Model Status

Not Applicable

Stock availability

16482 publicly available

Genomic Location

Chromosome (arm)

Recombination map

Cytogenetic map

Sequence location

Summary Information

Automatically generated summary

See sections below for more information

This gene is referred to in FlyBase by the symbol Scer\UAS (FBgn0015319). It is a engineered_foreign_region from Saccharomyces cerevisiae. Its molecular function is unknown. The biological processes in which it is involved are not known. 10 alleles are reported. No phenotypic data is available. It has no annotated transcripts. Gene has not been localized to the genome sequence.

Recent Updates

Description

What does this section display?

This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).

What does this section not display?

This section does not currently display links that were removed or gene model changes.

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FB2013_03

FB2013_02

All updates

Click here to see a list of all updates to this record from FB2010_08 and on.

Detailed Mapping Data

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

Left of (cM)

Right of (cM)

Notes

Gene Model & Products

Comments on Gene Model

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Associated CDS (aa)

Additional Transcript Data & Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank protein

Additional Polypeptide Data & Comments

Reported size (kDa)

Comments

External Data

Linkouts

Crossreferences

Sequences Consistent with the Gene Model

DDBJ /
EMBL /
GenBank

DNA sequence

Protein sequence

Name

AF516513

UniProtKB/Swiss-Prot

UniProtKB/TrEMBL

Mapped Features

Type

Symbol & Location

Additional Notes

References

External Data

Linkouts

Crossreferences

Expression Data

Transcript Expression

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

Additional Descriptive Data

Marker for

Subcellular Localization (GO Cellular Component)

CV term

Evidence

References

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

Reference

See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

FlyAtlas Anatomy Microarray

modENCODE Anatomy RNA-Seq

modENCODE Development RNA-Seq

modENCODE Cell Lines RNA-Seq

modENCODE Treatments RNA-Seq

Expression Clusters

External Data & Images

Linkouts

Alleles & Phenotypes

Summary of Allele Phenotypes

Phenotype manifest in

Allele

Classical Alleles ( 0 )

For All Classical Alleles Show

Allele of Scer\UAS	Class	Mutagen	Stocks	Known lesion

Alleles Carried on Transgenic Constructs ( 10 )

For All Alleles Carried on Transgenic Constructs Show

Allele of Scer\UAS	Mutagen	Stocks	Known lesion
Scer\UAS^{14x.hs.XP.Scer\FRT}	in vitro construct	10231	--
Scer\UAS^14x.hs.XP	in vitro construct	10231	--
Scer\UAS^14x.P\T	in vitro construct - regulatory fusion	3661	Yes
Scer\UAS^14x.hs	in vitro construct - regulatory fusion	1776	Yes
Scer\UAS^5x.hs	in vitro construct - regulatory fusion	814	--
Scer\UAS^14x.P\T.K10	in vitro construct - regulatory fusion	0	Yes
Scer\UAS^14x	in vitro construct	0	Yes
Scer\UAS^5x.hs.SV40	in vitro construct - regulatory fusion	0	Yes
Scer\UAS^5x.hs.αTub	in vitro construct	0	Yes
Scer\UAS^empty	in vitro construct - regulatory fusion	0	Yes

Aneuploid Aberrations

Transgenic Constructs & Insertions

Transgenic Constructs

Type of construct

Name

Expression data

Insertions

Type of insertions

Name

Expression data

Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )

Terms Based on Experimental Evidence ( 0 terms )

Terms Based on Predictions or Assertions ( 0 terms )

Sequence Ontology: Class of Gene

engineered_foreign_region

regulatory_region

Interactions & Pathways

Summary of Physical Interactions

Summary of Genetic Interactions

Interacts with

Please look at the allele data for full details of the genetic interactions

Scer\UAS allele

Gene

References

External Data

Linkouts

Orthologs

OrthoDB Orthologs (0) - based on analysis using Dmel annotation version 5.41

OrthoDB Ortholog Groups

OrthoDB orthology group searches

(Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288)

Drosophila inclusive ortholog search

No orthologs identified

Dipteran inclusive ortholog search

No orthologs identified

Insect inclusive ortholog search

No orthologs identified

Arthropod inclusive ortholog search

No orthologs identified

Metazoa inclusive ortholog search

No orthologs identified

Ortholog(s) in Drosophila melanogaster (None identified)

No D. melanogaster orthologies identified

Human Orthologs (0)

Gene

OMIM

HGNC

AAA Orthologs (0) based on analysis using Dmel annotation version 4.3

No orthologs identified

Stocks & Reagents

Stocks Listed in FlyBase ( 16482 )

More stocks available...

Genomic Clones ( 0 )

cDNA Clones ( 0 )

cDNA Clones, Fully Sequenced

BDGP DGC clones

Other clones

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi & Array Information

Linkouts

Antibody Information

Other Information

Discoverer

Etymology

Identification

Relationship to Other Genes

Source for database identity of

Source for database merge of

Additional comments

Other Comments

Tag or Foreign Gene Data

Foreign sequence; species == Saccharomyces cerevisiae; sequence == 'GAL4 protein binding sequence'.

External Crossreferences & Linkouts

Sequence Crossreferences

DDBJ / EMBL / GenBank

•

AF516513

Other Crossreferences

Linkouts

Synonyms & Secondary IDs ( 3 )

Reported As

Symbol Synonym

Scer\UAS

UAS

(Lawlor et al., 2011)

unnamed

(Thibault et al., 2004)

Name Synonym

Secondary FlyBase IDs

References ( 24 )

Generate a list of

All references relating to this gene ( 24 )

List References by type

Recent research papers ( 2 )

Goda et al., 2011, PLoS Genet. 7(7): e1002167: Adult Circadian Behavior in Drosophila Requires Developmental Expression of cycle, But Not period. [FBrf0214302]
Lawlor et al., 2011, Hum. Mol. Genet. 20(19): 3757--3768: Double-stranded RNA is pathogenic in Drosophila models of expanded repeat neurodegenerative diseases. [FBrf0215240]

Show all research papers ...

Recent reviews (0)

All reviews listed in FlyBase were published before 2011

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