A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\Vha26

General Information
SymbolDmel\Vha26SpeciesD. melanogaster
NameVacuolar H+-ATPase 26kD E subunitAnnotation symbolCG1088
Feature typeprotein_coding_geneFlyBase IDFBgn0015324
Gene Model StatusCurrent Stock availability 3 publicly available
Genomic Location
Chromosome (arm)3RRecombination map3-
Cytogenetic map83B4-83B4Sequence location3R:1,417,453..1,420,429 [+]

Genomic Maps

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modENCODE GBrowse
detailed view
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Automatically generated summary

See sections below for more information
The gene Vacuolar H+-ATPase 26kD E subunit is referred to in FlyBase by the symbol Dmel\Vha26 (CG1088, FBgn0015324). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: hydrogen-exporting ATPase activity, phosphorylative mechanism. It is reported to be involved in the biological process: proton transport. 6 alleles are reported. The phenotype of these alleles is annotated with: Malpighian tubule. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: ATPase, V1/A1 complex, subunit E. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of high expression. Peak expression observed within 00-06 and 12-24 hour embryonic stages, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: High levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1629065_s_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of Vha26. Gene sequence location is 3R:1417453..1420429.

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Description
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What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2012_01
References
Sequence features
FB2011_10
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
83B4-83B4  
Limits computationally determined from genome sequence between P{PZ}Snr101319&P{PZ}Itp-r83A05616 and P{lacW}Atus1938  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
84A-84B  
83B-83B  
 
83B-83B  
83B1-83B4  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\Vha26 for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0078751 FBtr0078700 FBtr0078701 FBtr0113576 FBtr0113577 FBtr0113578 FBtr0113579 FBtr0078750 FBtr0078748 FBtr0078749 FBtr0078747 FBtr0078746 FBtr0078744 FBtr0078745 FBpp0078400 FBpp0078349 FBpp0078350 FBpp0078397 FBpp0078398 FBpp0078395 FBpp0078393 FBpp0078396 FBpp0078394 FBpp0078399 FBti0010374 FBti0074823 FBti0004951 FBti0112197 FBti0099874
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0078701
  2276
  226
FBtr0078700
  2211
  226
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0078350  
26.1  
226  
5.96  
FBpp0078349  
26.1  
226  
5.96  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view noi-RA Vha26-RB Vha26-RA exba-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0015324


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0015324
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of high expression. Peak expression observed within 00-06 and 12-24 hour embryonic stages, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0015324 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 13042
embryo 02-04hr
 
 14137
embryo 04-06hr
 
 8078
embryo 06-08hr
 
 6100
embryo 08-10hr
 
 9213
embryo 10-12hr
 
 8584
embryo 12-14hr
 
 11310
embryo 14-16hr
 
 12301
embryo 16-18hr
 
 21059
embryo 18-20hr
 
 25415
embryo 20-22hr
 
 41870
embryo 22-24hr
 
 52992
larva L1
 
 43170
larva L2
 
 38203
larva L3 12hr old
 
 29082
larva L3 puffstage 1-2
 
 17263
larva L3 puffstage 3-6
 
 14618
larva L3 puffstage 7-9
 
 14503
white prepupae new
 
 10865
white prepupae 12hr
 
 13832
white prepupae 24hr
 
 7914
pupae 2d postWPP
 
 10801
pupae 3d postWPP
 
 13636
pupae 4d postWPP
 
 18713
adult male 01day
 
 20244
adult male 05day
 
 16473
adult male 30day
 
 14718
adult female 01day
 
 18524
adult female 05day
 
 18610
adult female 30day
 
 16358
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (13042)
embryo 02-04hr
 (14137)
embryo 04-06hr
 (8078)
embryo 06-08hr
 (6100)
embryo 08-10hr
 (9213)
embryo 10-12hr
 (8584)
embryo 12-14hr
 (11310)
embryo 14-16hr
 (12301)
embryo 16-18hr
 (21059)
embryo 18-20hr
 (25415)
embryo 20-22hr
 (41870)
embryo 22-24hr
 (52992)
larva L1
 (43170)
larva L2
 (38203)
larva L3 12hr old
 (29082)
larva L3 puffstage 1-2
 (17263)
larva L3 puffstage 3-6
 (14618)
larva L3 puffstage 7-9
 (14503)
white prepupae new
 (10865)
white prepupae 12hr
 (13832)
white prepupae 24hr
 (7914)
pupae 2d postWPP
 (10801)
pupae 3d postWPP
 (13636)
pupae 4d postWPP
 (18713)
adult male 01day
 (20244)
adult male 05day
 (16473)
adult male 30day
 (14718)
adult female 01day
 (18524)
adult female 05day
 (18610)
adult female 30day
 (16358)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (13042)
embryo 02-04hr
 (14137)
embryo 04-06hr
 (8078)
embryo 06-08hr
 (6100)
embryo 08-10hr
 (9213)
embryo 10-12hr
 (8584)
embryo 12-14hr
 (11310)
embryo 14-16hr
 (12301)
embryo 16-18hr
 (21059)
embryo 18-20hr
 (25415)
embryo 20-22hr
 (41870)
embryo 22-24hr
 (52992)
larva L1
 (43170)
larva L2
 (38203)
larva L3 12hr old
 (29082)
larva L3 puffstage 1-2
 (17263)
larva L3 puffstage 3-6
 (14618)
larva L3 puffstage 7-9
 (14503)
white prepupae new
 (10865)
white prepupae 12hr
 (13832)
white prepupae 24hr
 (7914)
pupae 2d postWPP
 (10801)
pupae 3d postWPP
 (13636)
pupae 4d postWPP
 (18713)
adult male 01day
 (20244)
adult male 05day
 (16473)
adult male 30day
 (14718)
adult female 01day
 (18524)
adult female 05day
 (18610)
adult female 30day
 (16358)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 (13042)
embryo 02-04hr
 (14137)
embryo 04-06hr
 
 8078
embryo 06-08hr
 
 6100
embryo 08-10hr
 
 9213
embryo 10-12hr
 
 8584
embryo 12-14hr
 (11310)
embryo 14-16hr
 (12301)
embryo 16-18hr
 (21059)
embryo 18-20hr
 (25415)
embryo 20-22hr
 (41870)
embryo 22-24hr
 (52992)
larva L1
 (43170)
larva L2
 (38203)
larva L3 12hr old
 (29082)
larva L3 puffstage 1-2
 (17263)
larva L3 puffstage 3-6
 (14618)
larva L3 puffstage 7-9
 (14503)
white prepupae new
 (10865)
white prepupae 12hr
 (13832)
white prepupae 24hr
 
 7914
pupae 2d postWPP
 (10801)
pupae 3d postWPP
 (13636)
pupae 4d postWPP
 (18713)
adult male 01day
 (20244)
adult male 05day
 (16473)
adult male 30day
 (14718)
adult female 01day
 (18524)
adult female 05day
 (18610)
adult female 30day
 (16358)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 13042
embryo 02-04hr
 
 14137
embryo 04-06hr
 
 8078
embryo 06-08hr
 
 6100
embryo 08-10hr
 
 9213
embryo 10-12hr
 
 8584
embryo 12-14hr
 
 11310
embryo 14-16hr
 
 12301
embryo 16-18hr
 
 21059
embryo 18-20hr
 
 25415
embryo 20-22hr
 
 41870
embryo 22-24hr
 
 52992
larva L1
 
 43170
larva L2
 
 38203
larva L3 12hr old
 
 29082
larva L3 puffstage 1-2
 
 17263
larva L3 puffstage 3-6
 
 14618
larva L3 puffstage 7-9
 
 14503
white prepupae new
 
 10865
white prepupae 12hr
 
 13832
white prepupae 24hr
 
 7914
pupae 2d postWPP
 
 10801
pupae 3d postWPP
 
 13636
pupae 4d postWPP
 
 18713
adult male 01day
 
 20244
adult male 05day
 
 16473
adult male 30day
 
 14718
adult female 01day
 
 18524
adult female 05day
 
 18610
adult female 30day
 
 16358
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0015324 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 13042
embryo 02-04hr
 
 14137
embryo 04-06hr
 
 8078
embryo 06-08hr
 
 6100
embryo 08-10hr
 
 9213
embryo 10-12hr
 
 8584
embryo 12-14hr
 
 11310
embryo 14-16hr
 
 12301
embryo 16-18hr
 
 21059
embryo 18-20hr
 
 25415
embryo 20-22hr
 
 41870
embryo 22-24hr
 
 52992
larva L1
 
 43170
larva L2
 
 38203
larva L3 12hr old
 
 29082
larva L3 puffstage 1-2
 
 17263
larva L3 puffstage 3-6
 
 14618
larva L3 puffstage 7-9
 
 14503
white prepupae new
 
 10865
white prepupae 12hr
 
 13832
white prepupae 24hr
 
 7914
pupae 2d postWPP
 
 10801
pupae 3d postWPP
 
 13636
pupae 4d postWPP
 
 18713
adult male 01day
 
 20244
adult male 05day
 
 16473
adult male 30day
 
 14718
adult female 01day
 
 18524
adult female 05day
 
 18610
adult female 30day
 
 16358
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (13042)
embryo 02-04hr
 (14137)
embryo 04-06hr
 (8078)
embryo 06-08hr
 (6100)
embryo 08-10hr
 (9213)
embryo 10-12hr
 (8584)
embryo 12-14hr
 (11310)
embryo 14-16hr
 (12301)
embryo 16-18hr
 (21059)
embryo 18-20hr
 (25415)
embryo 20-22hr
 (41870)
embryo 22-24hr
 (52992)
larva L1
 (43170)
larva L2
 (38203)
larva L3 12hr old
 (29082)
larva L3 puffstage 1-2
 (17263)
larva L3 puffstage 3-6
 (14618)
larva L3 puffstage 7-9
 (14503)
white prepupae new
 (10865)
white prepupae 12hr
 (13832)
white prepupae 24hr
 (7914)
pupae 2d postWPP
 (10801)
pupae 3d postWPP
 (13636)
pupae 4d postWPP
 (18713)
adult male 01day
 (20244)
adult male 05day
 (16473)
adult male 30day
 (14718)
adult female 01day
 (18524)
adult female 05day
 (18610)
adult female 30day
 (16358)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (13042)
embryo 02-04hr
 (14137)
embryo 04-06hr
 (8078)
embryo 06-08hr
 (6100)
embryo 08-10hr
 (9213)
embryo 10-12hr
 (8584)
embryo 12-14hr
 (11310)
embryo 14-16hr
 (12301)
embryo 16-18hr
 (21059)
embryo 18-20hr
 (25415)
embryo 20-22hr
 (41870)
embryo 22-24hr
 (52992)
larva L1
 (43170)
larva L2
 (38203)
larva L3 12hr old
 (29082)
larva L3 puffstage 1-2
 (17263)
larva L3 puffstage 3-6
 (14618)
larva L3 puffstage 7-9
 (14503)
white prepupae new
 (10865)
white prepupae 12hr
 (13832)
white prepupae 24hr
 (7914)
pupae 2d postWPP
 (10801)
pupae 3d postWPP
 (13636)
pupae 4d postWPP
 (18713)
adult male 01day
 (20244)
adult male 05day
 (16473)
adult male 30day
 (14718)
adult female 01day
 (18524)
adult female 05day
 (18610)
adult female 30day
 (16358)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 13042
embryo 02-04hr
 14137
embryo 04-06hr
 
 8078
embryo 06-08hr
 
 6100
embryo 08-10hr
 
 9213
embryo 10-12hr
 
 8584
embryo 12-14hr
 11310
embryo 14-16hr
 12301
embryo 16-18hr
 (21059)
embryo 18-20hr
 (25415)
embryo 20-22hr
 (41870)
embryo 22-24hr
 (52992)
larva L1
 (43170)
larva L2
 (38203)
larva L3 12hr old
 (29082)
larva L3 puffstage 1-2
 17263
larva L3 puffstage 3-6
 14618
larva L3 puffstage 7-9
 14503
white prepupae new
 10865
white prepupae 12hr
 13832
white prepupae 24hr
 
 7914
pupae 2d postWPP
 10801
pupae 3d postWPP
 13636
pupae 4d postWPP
 18713
adult male 01day
 20244
adult male 05day
 16473
adult male 30day
 14718
adult female 01day
 18524
adult female 05day
 18610
adult female 30day
 16358
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 13042
embryo 02-04hr
 
 14137
embryo 04-06hr
 
 8078
embryo 06-08hr
 
 6100
embryo 08-10hr
 
 9213
embryo 10-12hr
 
 8584
embryo 12-14hr
 
 11310
embryo 14-16hr
 
 12301
embryo 16-18hr
 
 21059
embryo 18-20hr
 
 25415
embryo 20-22hr
 
 41870
embryo 22-24hr
 
 52992
larva L1
 
 43170
larva L2
 
 38203
larva L3 12hr old
 
 29082
larva L3 puffstage 1-2
 
 17263
larva L3 puffstage 3-6
 
 14618
larva L3 puffstage 7-9
 
 14503
white prepupae new
 
 10865
white prepupae 12hr
 
 13832
white prepupae 24hr
 
 7914
pupae 2d postWPP
 
 10801
pupae 3d postWPP
 
 13636
pupae 4d postWPP
 
 18713
adult male 01day
 
 20244
adult male 05day
 
 16473
adult male 30day
 
 14718
adult female 01day
 
 18524
adult female 05day
 
 18610
adult female 30day
 
 16358
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0015324


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0015324
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: High levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0015324 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 1587.925
Larval Midgut
 
 4646.5
Larval Hindgut
 
 5110.6
Larval Malpighian Tubules
 
 3979.8
Larval Fat Body
 
 1624.6
Larval Salivary Gland
 
 3937.6
Larval Trachea
 
 2608.475
Larval Carcass
 
 2754.05
Adult Head
 
 2099.5
Adult Eye
 
 1648.475
Adult Brain
 
 2409.8
Adult Thoracic-Abdominal Ganglion
 
 2972.3
Adult Crop
 
 2093.2
Adult Midgut
 
 4330.8
Adult Hindgut
 
 5075
Adult Malpighian Tubules
 
 6448.4
Adult Fat Body
 
 1276.9
Adult Salivary Gland
 
 11317
Adult Heart
 
 1734.975
Adult VirginFemale Spermatheca
 
 1569.4
Adult InseminatedFemale Spermatheca
 
 1706.6
Adult Ovary
 
 1498.5
Adult Testis
 
 777.3
Adult Male Accessory Gland
 
 1730.4
Adult Carcass
 
 1771.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (1587.925)
Larval Midgut
 (4646.5)
Larval Hindgut
 (5110.6)
Larval Malpighian Tubules
 (3979.8)
Larval Fat Body
 (1624.6)
Larval Salivary Gland
 (3937.6)
Larval Trachea
 (2608.475)
Larval Carcass
 (2754.05)
Adult Head
 (2099.5)
Adult Eye
 (1648.475)
Adult Brain
 (2409.8)
Adult Thoracic-Abdominal Ganglion
 (2972.3)
Adult Crop
 (2093.2)
Adult Midgut
 (4330.8)
Adult Hindgut
 (5075)
Adult Malpighian Tubules
 (6448.4)
Adult Fat Body
 (1276.9)
Adult Salivary Gland
 (11317)
Adult Heart
 (1734.975)
Adult VirginFemale Spermatheca
 (1569.4)
Adult InseminatedFemale Spermatheca
 (1706.6)
Adult Ovary
 (1498.5)
Adult Testis
 (777.3)
Adult Male Accessory Gland
 (1730.4)
Adult Carcass
 (1771.3)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 (1587.925)
Larval Midgut
 (4646.5)
Larval Hindgut
 (5110.6)
Larval Malpighian Tubules
 (3979.8)
Larval Fat Body
 (1624.6)
Larval Salivary Gland
 (3937.6)
Larval Trachea
 (2608.475)
Larval Carcass
 (2754.05)
Adult Head
 (2099.5)
Adult Eye
 (1648.475)
Adult Brain
 (2409.8)
Adult Thoracic-Abdominal Ganglion
 (2972.3)
Adult Crop
 (2093.2)
Adult Midgut
 (4330.8)
Adult Hindgut
 (5075)
Adult Malpighian Tubules
 (6448.4)
Adult Fat Body
 (1276.9)
Adult Salivary Gland
 (11317)
Adult Heart
 (1734.975)
Adult VirginFemale Spermatheca
 (1569.4)
Adult InseminatedFemale Spermatheca
 (1706.6)
Adult Ovary
 (1498.5)
Adult Testis
 
 777.3
Adult Male Accessory Gland
 (1730.4)
Adult Carcass
 (1771.3)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 1587.925
Larval Midgut
 
 4646.5
Larval Hindgut
 
 5110.6
Larval Malpighian Tubules
 
 3979.8
Larval Fat Body
 
 1624.6
Larval Salivary Gland
 
 3937.6
Larval Trachea
 
 2608.475
Larval Carcass
 
 2754.05
Adult Head
 
 2099.5
Adult Eye
 
 1648.475
Adult Brain
 
 2409.8
Adult Thoracic-Abdominal Ganglion
 
 2972.3
Adult Crop
 
 2093.2
Adult Midgut
 
 4330.8
Adult Hindgut
 
 5075
Adult Malpighian Tubules
 
 6448.4
Adult Fat Body
 
 1276.9
Adult Salivary Gland
 
 11317
Adult Heart
 
 1734.975
Adult VirginFemale Spermatheca
 
 1569.4
Adult InseminatedFemale Spermatheca
 
 1706.6
Adult Ovary
 
 1498.5
Adult Testis
 
 777.3
Adult Male Accessory Gland
 
 1730.4
Adult Carcass
 
 1771.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0015324 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 1587.925
Larval Midgut
 
 4646.5
Larval Hindgut
 
 5110.6
Larval Malpighian Tubules
 
 3979.8
Larval Fat Body
 
 1624.6
Larval Salivary Gland
 
 3937.6
Larval Trachea
 
 2608.475
Larval Carcass
 
 2754.05
Adult Head
 
 2099.5
Adult Eye
 
 1648.475
Adult Brain
 
 2409.8
Adult Thoracic-Abdominal Ganglion
 
 2972.3
Adult Crop
 
 2093.2
Adult Midgut
 
 4330.8
Adult Hindgut
 
 5075
Adult Malpighian Tubules
 
 6448.4
Adult Fat Body
 
 1276.9
Adult Salivary Gland
 
 11317
Adult Heart
 
 1734.975
Adult VirginFemale Spermatheca
 
 1569.4
Adult InseminatedFemale Spermatheca
 
 1706.6
Adult Ovary
 
 1498.5
Adult Testis
 
 777.3
Adult Male Accessory Gland
 
 1730.4
Adult Carcass
 
 1771.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (1587.925)
Larval Midgut
 (4646.5)
Larval Hindgut
 (5110.6)
Larval Malpighian Tubules
 (3979.8)
Larval Fat Body
 (1624.6)
Larval Salivary Gland
 (3937.6)
Larval Trachea
 (2608.475)
Larval Carcass
 (2754.05)
Adult Head
 (2099.5)
Adult Eye
 (1648.475)
Adult Brain
 (2409.8)
Adult Thoracic-Abdominal Ganglion
 (2972.3)
Adult Crop
 (2093.2)
Adult Midgut
 (4330.8)
Adult Hindgut
 (5075)
Adult Malpighian Tubules
 (6448.4)
Adult Fat Body
 (1276.9)
Adult Salivary Gland
 (11317)
Adult Heart
 (1734.975)
Adult VirginFemale Spermatheca
 (1569.4)
Adult InseminatedFemale Spermatheca
 (1706.6)
Adult Ovary
 (1498.5)
Adult Testis
 777.3
Adult Male Accessory Gland
 (1730.4)
Adult Carcass
 (1771.3)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 1587.925
Larval Midgut
 (4646.5)
Larval Hindgut
 (5110.6)
Larval Malpighian Tubules
 (3979.8)
Larval Fat Body
 1624.6
Larval Salivary Gland
 (3937.6)
Larval Trachea
 (2608.475)
Larval Carcass
 (2754.05)
Adult Head
 (2099.5)
Adult Eye
 1648.475
Adult Brain
 (2409.8)
Adult Thoracic-Abdominal Ganglion
 (2972.3)
Adult Crop
 (2093.2)
Adult Midgut
 (4330.8)
Adult Hindgut
 (5075)
Adult Malpighian Tubules
 (6448.4)
Adult Fat Body
 1276.9
Adult Salivary Gland
 (11317)
Adult Heart
 (1734.975)
Adult VirginFemale Spermatheca
 1569.4
Adult InseminatedFemale Spermatheca
 1706.6
Adult Ovary
 1498.5
Adult Testis
 
 777.3
Adult Male Accessory Gland
 (1730.4)
Adult Carcass
 (1771.3)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 1587.925
Larval Midgut
 
 4646.5
Larval Hindgut
 
 5110.6
Larval Malpighian Tubules
 
 3979.8
Larval Fat Body
 
 1624.6
Larval Salivary Gland
 
 3937.6
Larval Trachea
 
 2608.475
Larval Carcass
 
 2754.05
Adult Head
 
 2099.5
Adult Eye
 
 1648.475
Adult Brain
 
 2409.8
Adult Thoracic-Abdominal Ganglion
 
 2972.3
Adult Crop
 
 2093.2
Adult Midgut
 
 4330.8
Adult Hindgut
 
 5075
Adult Malpighian Tubules
 
 6448.4
Adult Fat Body
 
 1276.9
Adult Salivary Gland
 
 11317
Adult Heart
 
 1734.975
Adult VirginFemale Spermatheca
 
 1569.4
Adult InseminatedFemale Spermatheca
 
 1706.6
Adult Ovary
 
 1498.5
Adult Testis
 
 777.3
Adult Male Accessory Gland
 
 1730.4
Adult Carcass
 
 1771.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 2099.5
 
NA 
Eye
 
 1648.475
 
NA 
Brain
 
 2409.8
 
1587.925 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 2972.3
 
NA 
Crop
 
 2093.2
 
4646.5 
Midgut
 
 4330.8
 
5110.6 
Hindgut
 
 5075
 
3979.8 
Malpighian Tubules
 
 6448.4
 
1624.6 
Fat Body
 
 1276.9
 
3937.6 
Salivary Gland
 
 11317
 
NA 
Heart
 
 1734.975
 
2608.475 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 1569.4
 
NA 
InseminatedFemale Spermatheca
 
 1706.6
 
NA 
Ovary
 
 1498.5
 
NA 
Testis
 
 777.3
 
NA 
Male Accessory Gland
 
 1730.4
 
2754.05 
Carcass
 
 1771.3

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 3 )
For All Classical Alleles Show

Allele of Vha26ClassMutagenStocksKnown lesion
Vha26j3E71 Yes
Vha26C0 Yes
Vha26CC013800 Yes
hide Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show

Allele of Vha26ClassMutagenStocksKnown lesion
Vha26GD71121 Yes
Vha26KK1093261 Yes
Vha26tMa0 Yes
hide Aneuploid Aberrations
Disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
UAS construct
Insertions
Type of insertions
Name
Expression data
insertion of enhancer trap
miscellaneous insertions
hide Gene Ontology: Function, Process & Cellular Component ( 6 unique terms )
hide Terms Based on Experimental Evidence ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term
References
inferred from direct assay
hide Terms Based on Predictions or Assertions ( 5 terms )
Molecular Function
CV term
References
inferred from sequence or structural similarity with Saccharomyces VMA4
inferred from sequence or structural similarity with UniProtKB:P31402
non-traceable author statement
Biological Process
CV term
References
Cellular Component
CV term
References
inferred from sequence or structural similarity with Saccharomyces VMA4
inferred from sequence or structural similarity with UniProtKB:P31402
non-traceable author statement
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
Vha26 allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 3 )
Bloomington
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 228 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for identity of: Vha26 CG1088
Source for database merge of
Source for merge of: Vha26 anon-83Bb
Source for merge of: Vha26 BcDNA:GH03683
Additional comments
Source for merge of Vha26 BcDNA:GH03683 was sequence comparison (date:990717).
hide Other Comments
Nonsense-mediated mRNA decay (NMD) down-regulates a distinct splice isoform(s) of this gene.
dsRNA made from templates generated with primers directed against Vha26 that is transfected into S2 treated with Listeria monocytogenes reveals Vha26 to be involved in Listeria monocytogenes entry and vacuolar escape.
Transcription unit identified during molecular analysis of the noi gene region.
Isolated using a M.sexta V-ATPase E-subunit cDNA.
Vha26 has been cloned and characterised.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 14 )
Reported As
Symbol Synonym
anon-83Bb
 
BcDNA:GH03683
 
BcDNA.GH03683
VhaE
 
Name Synonym
E subunit
vacuolar ATP synthase subunit E
Vacuolar H+-ATPase 26kD E subunit
Secondary FlyBase IDs
  • FBgn0024707
hide References ( 45 )
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List References by type
hide Recent research papers ( 3 )
Adamson et al., 2011, Genetics 189(2): 495--506
A Drosophila model for genetic analysis of influenza viral/host interactions. [FBrf0216397]
Rose et al., 2011, Cell Host Microbe 10(2): 97--104
Natural resistance-associated macrophage protein is a cellular receptor for sindbis virus in both insect and Mammalian hosts. [FBrf0214675]
Blanco et al., 2010, BMC Dev. Biol. 10: 94
Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812]