A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene Dmel\l(2)PC4-Q

General Information
SymbolDmel\l(2)PC4-QSpeciesD. melanogaster
Namelethal (2) PC4-QAnnotation symbol
Feature typegeneFlyBase IDFBgn0015987
Gene Model StatusUnannotated Stock availability 1 publicly available
Genomic Location
Chromosome (arm)Recombination map2-
Cytogenetic map55E6-55F3Sequence location
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Automatically generated summary

See sections below for more information
The gene lethal (2) PC4-Q is referred to in FlyBase by the symbol Dmel\l(2)PC4-Q (FBgn0015987). It is a gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has no annotated transcripts. Gene has not been localized to the genome sequence.

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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
55E6-55F3  
Left limit from inclusion within Df(2R)P34 (FBrf0086812) Right limit from inclusion within Df(2R)PC4 (FBrf0086812)  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
2-
 
Left of (cM)
Right of (cM)
Notes
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Comments on Gene Model
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Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
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Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
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Type
Symbol & Location
Additional Notes
References
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Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
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Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term
Evidence
References
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Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
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hide modENCODE Anatomy RNA-Seq
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Linkouts
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
lethal | recessive
Phenotype manifest in
Allele
hide Classical Alleles ( 2 )
For All Classical Alleles Show

Allele of l(2)PC4-QClassMutagenStocksKnown lesion
l(2)PC4-Q2671 --
l(2)PC4-Q2720 --
hide Alleles Carried on Transgenic Constructs ( 0 )
For All Alleles Carried on Transgenic Constructs Show

Allele of l(2)PC4-QClassMutagenStocksKnown lesion
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Not disrupted in
(Tearle, 1996.5.14)
(Tearle, 1996.5.14)
(Tearle, 1996.5.14)
(Doane, 2000)
Disrupted in
(Tearle, 1996.5.14)
(Tearle, 1996.5.14)
(Tearle, 1996.5.14)
(Tearle, 1996.5.14)
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Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
hide Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
hide Terms Based on Experimental Evidence ( 0 terms )
hide Terms Based on Predictions or Assertions ( 0 terms )
hide Sequence Ontology: Class of Gene
gene
 
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Interacts with
Please look at the allele data for full details of the genetic interactions
l(2)PC4-Q allele
Gene
References
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Linkouts
hide Orthologs
hide OrthoDB Orthologs (0) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
OrthoDB orthology group searches
(Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288)
Drosophila inclusive ortholog search
No orthologs identified
Dipteran inclusive ortholog search
No orthologs identified
Insect inclusive ortholog search
No orthologs identified
Arthropod inclusive ortholog search
No orthologs identified
Metazoa inclusive ortholog search
No orthologs identified
Orthologs in Drosophila Species (None identified)
No orthologies identified
Orthologs in non-Drosophila Dipterans (None identified)
No non-Drosophilid orthologies identified
Orthologs in non-Dipteran Insects (None identified)
No non-Dipteran orthologies identified
Orthologs in non-Insect Arthropods (None identified)
No non-Insect Arthropod orthologies identified
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
hide Human Orthologs (0)
Gene
OMIM
HGNC
hideAAA Orthologs (0) based on analysis using Dmel annotation version 4.3
No orthologs identified
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 1 )
Bloomington
6053
b1 pr1 l(2)PC4-Q267 cn1 wxwxt bw1/CyO
hide Genomic Clones ( 0 )
hide cDNA Clones ( 0 )
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
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Linkouts
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
•
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Source for database identity of
Source for database merge of
Additional comments
hide Other Comments
Defined during a mutagenesis of the 55A region.
(Tearle, 1996.5.14)
hide External Crossreferences & Linkouts
Sequence Crossreferences
Other Crossreferences
Linkouts
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
•
hide Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym
l(2)PC4-Q
 
Name Synonym
lethal (2) PC4-Q
 
Secondary FlyBase IDs
hide References ( 3 )
Research paper
Doane, 2000, D. I. S. 83: 168--170
Complementation tests using P-induced mutations place adipose in 55B. [FBrf0135619]
Personal communication to FlyBase
Tearle, 1996.5.14, [title not yet available]
[title not yet available] [FBrf0086812]
Stock list
Umea University, 1992-, Umea stocklist.
Umea stocklist. [FBrf0084465]