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Gene Dmel\Pino

General Information
Symbol	Dmel\Pino	Species	D. melanogaster
Name	Pinocchio	Annotation symbol	CG4710
Feature type	protein_coding_gene	FlyBase ID	FBgn0016926
Gene Model Status	Current	Stock availability	15 publicly available
Also Known As	smi21F
Genomic Location
Chromosome (arm)	2L	Recombination map
Cytogenetic map	21F1-21F1	Sequence location	2L:1,114,654..1,128,953 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Pinocchio is referred to in FlyBase by the symbol Dmel\Pino (CG4710, FBgn0016926). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process: olfactory behavior; regulation of response to DNA damage stimulus. 27 alleles are reported. The phenotype of these alleles is annotated with: antenna. It has 3 annotated transcripts and 3 annotated polypeptides. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed during late larval stages, at stages throughout the pupal period. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult crop, larval midgut, larval/adult hindgut, adult heart, larval/adult fat body, adult salivary gland, larval trachea, adult female reproductive system, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, larval/adult central nervous system, adult midgut, larval/adult Malpighian tubules, larval salivary gland, adult male reproductive system, larval carcass. Comments on Affy2 ProbeSet: ProbeSet 1633794_a_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of Pino. Gene sequence location is 2L:1114654..1128953.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 21F1-21F1   Limits computationally determined from genome sequence between P{lacW}l(2)k09610k09610&P{lacW}Sk09538a and P{PZ}l(2)1068510685&P{lacW}Tango14k00619
Experimentally Determined Cytological Location
Cytogenetic map Notes References 21F-21F   (determined by in situ hybridisation)   (Anholt et al., 1996)
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Pino for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.45 Apparent intron not annotated (FBsf0000175563): may correspond to splicing intermediate. Low-frequency RNA-Seq exon junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Pino-RA FBtr0077988  NM_134724   2079   171 Pino-RB FBtr0077987  NM_164405   1980   249 Pino-RC FBtr0332272  NM_001272925   2130   171
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Pino-PA   FBpp0077653   17.9   171   5.10     NP_608568   AAF51418 Pino-PB   FBpp0077652   26.3   249   4.68     NP_722679   AAF51417 Pino-PC   FBpp0304561   17.9   171   5.10     NP_001259854   AGB92391
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA201594   AA392519   AA441243   AA539583   AA695318   AA697108   AA697542   AA948856   AE014134 AAF51417   AE014134 AAF51418   AE014134 AGB92391   AI110163   AI134318   AI135415   AI135763   AI259602   AI292555   AI294656   AI386904   AI535022   AI546670   AI946060   AQ026003   AQ073441   AQ073700   AQ254812   AW942396   AX094007   AY069447 AAL39592   BF490769   BG638502   BH614850   BH614851   BH854566   BI164606   BI168294   BI170594   BI173417   BI214338   BI215009   BI215218   BI232360   BI235484   BI239907   BI242224   BI243465   BI368554   BI370547   BI373312   BI373852   BI484109   BI484651   BI564735   BI568650   BI570699   BI572248   BI574445   BI575830   BI577761   BI580457   BI582768   BI583849   BI585965   BI586075   BI613089   BI616534   BI620439   BI620971   BI624721   BI627578   BI628735   BI628877   BI630941   BI631287   BI633857   BI633885   BP559092   BP559093   BQ102654   BQ103123   BT001733 AAN71488   BT133460   CK660970   CL705928   CO153020   CO182505   CO185078   CO302266   CO303792   CO311381   CO319394   CO333764   CO337738   CZ469987   CZ470029   CZ470037   CZ471778   CZ473171   CZ476639   CZ477292   EC054188   EC054700   EC071598   EC076314   EC087791   EC197617   EC200274   EC200315   EC204437   EC209416   EC216799   EC219979   EC229685   EC240299   EC262656   EV578358   EV578759   EV593601   GH748935   GH752142   GH753594   GH755826   GH770198   GH771677   GH772100   GH772614   GH772895   GH773991   GH774390   GH775647   GH778572   GH778824   GH780235   GH780975   GH781014   GH782926   GH785437   GH786373   GH787392   GH787430   GH789803   GH790404   GH790511   GH791410   GH792428   GH792906   GH797611   GH798784   GH800343   GH803584   GH805495   GH805675   GH806673   GH807380   GH807600   GH807861   GH808062   GH808717   GH810086   GH810254   GH816418   GH816703   GH817211   GH817239   GH819237   GH820520   GH821106   GH823329   GH823547   GH824250   GH825099   GH827528   GH828691   GH829423   GH829619   GH832283   GH832334   GH833236   GH834121   GH835015   GH836428   GH838624   GH838821   GH839287   GH839417   GH839728   GH839787   GH844135   GH844156   GH844316   GH850510   GH850566   GH851971   GH852097   GH852724   GH852778   GH853707   GH856503   GH857131   GH858653   GH859537   GH861947   GH862314   GH863774   GH863882   GH864926   GH865501   GH868872   GH869785   GH873079   GH874648   GH876011   GH877284   GH878024   GH878161   GH879270   GH879565   GH881251   GH883508   GH884477   GH888529   GH892920   GH899901   GH900342   GH902433   GH906685   GH913008   GH914625   GH915304   GH920735   GH925627   GH926171   GH927121   GH927479   GH928312   GH929437   GH932955   GH934253   GH935203
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8T0A4 Q9VPW8 Q8IGK9
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   pole plasm   (Fisher et al., 2012) Comment:maternally deposited organism   • pole plasm (Fisher et al., 2012) Comment:maternally deposited embryonic stage 4 -- 6   anlage in statu nascendi   (Fisher et al., 2012) dorsal ectoderm anlage   (Fisher et al., 2012) Comment:anlage in statu nascendi organism | pair rule expression pattern   (Fisher et al., 2012) organism | ubiquitous   (Fisher et al., 2012) posterior ectoderm anlage   (Fisher et al., 2012) Comment:anlage in statu nascendi ventral ectoderm anlage   (Fisher et al., 2012) Comment:anlage in statu nascendi yolk   (Fisher et al., 2012) yolk nucleus   (Fisher et al., 2012) embryonic stage 7 -- 8   dorsal ectoderm   (Fisher et al., 2012) organism | pair rule expression pattern   (Fisher et al., 2012) organism | faint & ubiquitous   (Fisher et al., 2012) pole cell   (Fisher et al., 2012) ventral ectoderm   (Fisher et al., 2012) ventral nerve cord primordium   (Fisher et al., 2012) Comment:reported as ventral nerve cord anlage yolk nucleus   (Fisher et al., 2012) embryonic stage 9 -- 10   amnioserosa   (Fisher et al., 2012) germline cell   (Fisher et al., 2012) embryonic stage 11 -- 12   germline cell   (Fisher et al., 2012) hindgut proper primordium   (Fisher et al., 2012) yolk nucleus   (Fisher et al., 2012) embryonic stage 13 -- 16   embryonic anal pad   (Fisher et al., 2012) embryonic/larval fat body   (Fisher et al., 2012) embryonic/larval visceral muscle   (Fisher et al., 2012) germline cell   (Fisher et al., 2012) adult stage   third segment of antenna   (Rollmann et al., 2005) Comment:Assay specific to Pino-RB transcript (transcript I)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult crop, larval midgut, larval/adult hindgut, adult heart, larval/adult fat body, adult salivary gland, larval trachea, adult female reproductive system, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, larval/adult central nervous system, adult midgut, larval/adult Malpighian tubules, larval salivary gland, adult male reproductive system, larval carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    199.125 Larval Midgut    614.6 Larval Hindgut    915.9 Larval Malpighian Tubules    482.8 Larval Fat Body    983 Larval Salivary Gland    266.9 Larval Trachea    667.075 Larval Carcass    483.25 Adult Head    681.6 Adult Eye    397.875 Adult Brain    352.8 Adult Thoracic-Abdominal Ganglion    344.9 Adult Crop    1448.5 Adult Midgut    481.7 Adult Hindgut    996.9 Adult Malpighian Tubules    460.1 Adult Fat Body    2311.8 Adult Salivary Gland    1689.2 Adult Heart    1806.775 Adult VirginFemale Spermatheca    685.7 Adult InseminatedFemale Spermatheca    849.2 Adult Ovary    1014.5 Adult Testis    310.7 Adult Male Accessory Gland    191.5 Adult Carcass    1303.5 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    199.125 Larval Midgut  (614.6) Larval Hindgut  (915.9) Larval Malpighian Tubules    482.8 Larval Fat Body  (983) Larval Salivary Gland    266.9 Larval Trachea  (667.075) Larval Carcass    483.25 Adult Head  (681.6) Adult Eye    397.875 Adult Brain    352.8 Adult Thoracic-Abdominal Ganglion    344.9 Adult Crop  (1448.5) Adult Midgut    481.7 Adult Hindgut  (996.9) Adult Malpighian Tubules    460.1 Adult Fat Body  (2311.8) Adult Salivary Gland  (1689.2) Adult Heart  (1806.775) Adult VirginFemale Spermatheca  (685.7) Adult InseminatedFemale Spermatheca  (849.2) Adult Ovary  (1014.5) Adult Testis    310.7 Adult Male Accessory Gland    191.5 Adult Carcass  (1303.5) Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    199.125 Larval Midgut    614.6 Larval Hindgut    915.9 Larval Malpighian Tubules    482.8 Larval Fat Body    983 Larval Salivary Gland    266.9 Larval Trachea    667.075 Larval Carcass    483.25 Adult Head    681.6 Adult Eye    397.875 Adult Brain    352.8 Adult Thoracic-Abdominal Ganglion    344.9 Adult Crop  (1448.5) Adult Midgut    481.7 Adult Hindgut    996.9 Adult Malpighian Tubules    460.1 Adult Fat Body  (2311.8) Adult Salivary Gland  (1689.2) Adult Heart  (1806.775) Adult VirginFemale Spermatheca    685.7 Adult InseminatedFemale Spermatheca    849.2 Adult Ovary  1014.5 Adult Testis    310.7 Adult Male Accessory Gland    191.5 Adult Carcass  (1303.5) Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    199.125 Larval Midgut    614.6 Larval Hindgut    915.9 Larval Malpighian Tubules    482.8 Larval Fat Body    983 Larval Salivary Gland    266.9 Larval Trachea    667.075 Larval Carcass    483.25 Adult Head    681.6 Adult Eye    397.875 Adult Brain    352.8 Adult Thoracic-Abdominal Ganglion    344.9 Adult Crop    1448.5 Adult Midgut    481.7 Adult Hindgut    996.9 Adult Malpighian Tubules    460.1 Adult Fat Body    2311.8 Adult Salivary Gland    1689.2 Adult Heart    1806.775 Adult VirginFemale Spermatheca    685.7 Adult InseminatedFemale Spermatheca    849.2 Adult Ovary    1014.5 Adult Testis    310.7 Adult Male Accessory Gland    191.5 Adult Carcass    1303.5 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    199.125 Larval Midgut    614.6 Larval Hindgut    915.9 Larval Malpighian Tubules    482.8 Larval Fat Body    983 Larval Salivary Gland    266.9 Larval Trachea    667.075 Larval Carcass    483.25 Adult Head    681.6 Adult Eye    397.875 Adult Brain    352.8 Adult Thoracic-Abdominal Ganglion    344.9 Adult Crop    1448.5 Adult Midgut    481.7 Adult Hindgut    996.9 Adult Malpighian Tubules    460.1 Adult Fat Body    2311.8 Adult Salivary Gland    1689.2 Adult Heart    1806.775 Adult VirginFemale Spermatheca    685.7 Adult InseminatedFemale Spermatheca    849.2 Adult Ovary    1014.5 Adult Testis    310.7 Adult Male Accessory Gland    191.5 Adult Carcass    1303.5 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    199.125 Larval Midgut  614.6 Larval Hindgut  (915.9) Larval Malpighian Tubules    482.8 Larval Fat Body  (983) Larval Salivary Gland    266.9 Larval Trachea  667.075 Larval Carcass    483.25 Adult Head  681.6 Adult Eye    397.875 Adult Brain    352.8 Adult Thoracic-Abdominal Ganglion    344.9 Adult Crop  (1448.5) Adult Midgut    481.7 Adult Hindgut  (996.9) Adult Malpighian Tubules    460.1 Adult Fat Body  (2311.8) Adult Salivary Gland  (1689.2) Adult Heart  (1806.775) Adult VirginFemale Spermatheca  685.7 Adult InseminatedFemale Spermatheca  (849.2) Adult Ovary  (1014.5) Adult Testis    310.7 Adult Male Accessory Gland    191.5 Adult Carcass  (1303.5) Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    199.125 Larval Midgut    614.6 Larval Hindgut    915.9 Larval Malpighian Tubules    482.8 Larval Fat Body    983 Larval Salivary Gland    266.9 Larval Trachea    667.075 Larval Carcass    483.25 Adult Head    681.6 Adult Eye    397.875 Adult Brain    352.8 Adult Thoracic-Abdominal Ganglion    344.9 Adult Crop  1448.5 Adult Midgut    481.7 Adult Hindgut    996.9 Adult Malpighian Tubules    460.1 Adult Fat Body  (2311.8) Adult Salivary Gland  1689.2 Adult Heart  (1806.775) Adult VirginFemale Spermatheca    685.7 Adult InseminatedFemale Spermatheca    849.2 Adult Ovary  1014.5 Adult Testis    310.7 Adult Male Accessory Gland    191.5 Adult Carcass  1303.5 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    199.125 Larval Midgut    614.6 Larval Hindgut    915.9 Larval Malpighian Tubules    482.8 Larval Fat Body    983 Larval Salivary Gland    266.9 Larval Trachea    667.075 Larval Carcass    483.25 Adult Head    681.6 Adult Eye    397.875 Adult Brain    352.8 Adult Thoracic-Abdominal Ganglion    344.9 Adult Crop    1448.5 Adult Midgut    481.7 Adult Hindgut    996.9 Adult Malpighian Tubules    460.1 Adult Fat Body    2311.8 Adult Salivary Gland    1689.2 Adult Heart    1806.775 Adult VirginFemale Spermatheca    685.7 Adult InseminatedFemale Spermatheca    849.2 Adult Ovary    1014.5 Adult Testis    310.7 Adult Male Accessory Gland    191.5 Adult Carcass    1303.5 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    681.6   NA  Eye    397.875   NA  Brain    352.8   199.125  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    344.9   NA  Crop    1448.5   614.6  Midgut    481.7   915.9  Hindgut    996.9   482.8  Malpighian Tubules    460.1   983  Fat Body    2311.8   266.9  Salivary Gland    1689.2   NA  Heart    1806.775   667.075  Trachea    NA   NA  VirginFemale Spermatheca    685.7   NA  InseminatedFemale Spermatheca    849.2   NA  Ovary    1014.5   NA  Testis    310.7   NA  Male Accessory Gland    191.5   483.25  Carcass    1303.5 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    27 central nervous system, larvae L3    13 central nervous system, pupae P8    10 head, virgin 1-day female    41 head, virgin 4-day female    31 head, virgin 20-day female    48 head, mated 1-day female    37 head, mated 4-day female    81 head, mated 20-day female    45 head, mated 1-day male    45 head, mated 4-day male    54 head, mated 20-day male    50 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    9 digestive system, larvae L3 wandering    25 digestive system, 1-day adult    26 digestive system, 4-day adult    36 digestive system, 20-day adult    28 fat body, larvae L3 wandering    19 fat body, white prepupae    9 fat body, pupae P8    19 carcass, larvae L3 wandering    32 carcass, 1-day adult    72 carcass, 4-day adult    90 carcass, 20-day adult    116 ovary, virgin 4-day female    56 ovary, mated 4-day female    49 testis, mated 4-day male    22 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (27) central nervous system, larvae L3    13 central nervous system, pupae P8    10 head, virgin 1-day female  (41) head, virgin 4-day female  (31) head, virgin 20-day female  (48) head, mated 1-day female  (37) head, mated 4-day female  (81) head, mated 20-day female  (45) head, mated 1-day male  (45) head, mated 4-day male  (54) head, mated 20-day male  (50) salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    9 digestive system, larvae L3 wandering    25 digestive system, 1-day adult  26 digestive system, 4-day adult  (36) digestive system, 20-day adult  (28) fat body, larvae L3 wandering    19 fat body, white prepupae    9 fat body, pupae P8    19 carcass, larvae L3 wandering  (32) carcass, 1-day adult  (72) carcass, 4-day adult  (90) carcass, 20-day adult  (116) ovary, virgin 4-day female  (56) ovary, mated 4-day female  (49) testis, mated 4-day male    22 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    27 central nervous system, larvae L3    13 central nervous system, pupae P8    10 head, virgin 1-day female    41 head, virgin 4-day female    31 head, virgin 20-day female    48 head, mated 1-day female    37 head, mated 4-day female    81 head, mated 20-day female    45 head, mated 1-day male    45 head, mated 4-day male    54 head, mated 20-day male    50 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    9 digestive system, larvae L3 wandering    25 digestive system, 1-day adult    26 digestive system, 4-day adult    36 digestive system, 20-day adult    28 fat body, larvae L3 wandering    19 fat body, white prepupae    9 fat body, pupae P8    19 carcass, larvae L3 wandering    32 carcass, 1-day adult    72 carcass, 4-day adult    90 carcass, 20-day adult  (116) ovary, virgin 4-day female    56 ovary, mated 4-day female    49 testis, mated 4-day male    22 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    27 central nervous system, larvae L3    13 central nervous system, pupae P8    10 head, virgin 1-day female    41 head, virgin 4-day female    31 head, virgin 20-day female    48 head, mated 1-day female    37 head, mated 4-day female    81 head, mated 20-day female    45 head, mated 1-day male    45 head, mated 4-day male    54 head, mated 20-day male    50 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    9 digestive system, larvae L3 wandering    25 digestive system, 1-day adult    26 digestive system, 4-day adult    36 digestive system, 20-day adult    28 fat body, larvae L3 wandering    19 fat body, white prepupae    9 fat body, pupae P8    19 carcass, larvae L3 wandering    32 carcass, 1-day adult    72 carcass, 4-day adult    90 carcass, 20-day adult    116 ovary, virgin 4-day female    56 ovary, mated 4-day female    49 testis, mated 4-day male    22 accessory gland, mated 4-day male    14 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    27 central nervous system, larvae L3    13 central nervous system, pupae P8    10 head, virgin 1-day female    41 head, virgin 4-day female    31 head, virgin 20-day female    48 head, mated 1-day female    37 head, mated 4-day female    81 head, mated 20-day female    45 head, mated 1-day male    45 head, mated 4-day male    54 head, mated 20-day male    50 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    9 digestive system, larvae L3 wandering    25 digestive system, 1-day adult    26 digestive system, 4-day adult    36 digestive system, 20-day adult    28 fat body, larvae L3 wandering    19 fat body, white prepupae    9 fat body, pupae P8    19 carcass, larvae L3 wandering    32 carcass, 1-day adult    72 carcass, 4-day adult    90 carcass, 20-day adult    116 ovary, virgin 4-day female    56 ovary, mated 4-day female    49 testis, mated 4-day male    22 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  27 central nervous system, larvae L3    13 central nervous system, pupae P8    10 head, virgin 1-day female  (41) head, virgin 4-day female  31 head, virgin 20-day female  (48) head, mated 1-day female  (37) head, mated 4-day female  (81) head, mated 20-day female  (45) head, mated 1-day male  (45) head, mated 4-day male  (54) head, mated 20-day male  (50) salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    9 digestive system, larvae L3 wandering    25 digestive system, 1-day adult  26 digestive system, 4-day adult  (36) digestive system, 20-day adult  28 fat body, larvae L3 wandering    19 fat body, white prepupae    9 fat body, pupae P8    19 carcass, larvae L3 wandering  32 carcass, 1-day adult  (72) carcass, 4-day adult  (90) carcass, 20-day adult  (116) ovary, virgin 4-day female  (56) ovary, mated 4-day female  (49) testis, mated 4-day male    22 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    27 central nervous system, larvae L3    13 central nervous system, pupae P8    10 head, virgin 1-day female    41 head, virgin 4-day female    31 head, virgin 20-day female    48 head, mated 1-day female    37 head, mated 4-day female    81 head, mated 20-day female    45 head, mated 1-day male    45 head, mated 4-day male    54 head, mated 20-day male    50 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    9 digestive system, larvae L3 wandering    25 digestive system, 1-day adult    26 digestive system, 4-day adult    36 digestive system, 20-day adult    28 fat body, larvae L3 wandering    19 fat body, white prepupae    9 fat body, pupae P8    19 carcass, larvae L3 wandering    32 carcass, 1-day adult    72 carcass, 4-day adult    90 carcass, 20-day adult  116 ovary, virgin 4-day female    56 ovary, mated 4-day female    49 testis, mated 4-day male    22 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    27 central nervous system, larvae L3    13 central nervous system, pupae P8    10 head, virgin 1-day female    41 head, virgin 4-day female    31 head, virgin 20-day female    48 head, mated 1-day female    37 head, mated 4-day female    81 head, mated 20-day female    45 head, mated 1-day male    45 head, mated 4-day male    54 head, mated 20-day male    50 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    9 digestive system, larvae L3 wandering    25 digestive system, 1-day adult    26 digestive system, 4-day adult    36 digestive system, 20-day adult    28 fat body, larvae L3 wandering    19 fat body, white prepupae    9 fat body, pupae P8    19 carcass, larvae L3 wandering    32 carcass, 1-day adult    72 carcass, 4-day adult    90 carcass, 20-day adult    116 ovary, virgin 4-day female    56 ovary, mated 4-day female    49 testis, mated 4-day male    22 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed during late larval stages, at stages throughout the pupal period. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    95 embryo 02-04hr    90 embryo 04-06hr    59 embryo 06-08hr    22 embryo 08-10hr    34 embryo 10-12hr    26 embryo 12-14hr    21 embryo 14-16hr    19 embryo 16-18hr    27 embryo 18-20hr    52 embryo 20-22hr    71 embryo 22-24hr    87 larva L1    38 larva L2    41 larva L3 12hr old    45 larva L3 puffstage 1-2    35 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9    136 white prepupae new    227 white prepupae 12hr    109 white prepupae 24hr    56 pupae 2d postWPP    58 pupae 3d postWPP    54 pupae 4d postWPP    514 adult male 01day    85 adult male 05day    105 adult male 30day    99 adult female 01day    82 adult female 05day    88 adult female 30day    89 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (95) embryo 02-04hr  (90) embryo 04-06hr  (59) embryo 06-08hr    22 embryo 08-10hr  (34) embryo 10-12hr  26 embryo 12-14hr    21 embryo 14-16hr    19 embryo 16-18hr  (27) embryo 18-20hr  (52) embryo 20-22hr  (71) embryo 22-24hr  (87) larva L1  (38) larva L2  (41) larva L3 12hr old  (45) larva L3 puffstage 1-2  (35) larva L3 puffstage 3-6  (57) larva L3 puffstage 7-9  (136) white prepupae new  (227) white prepupae 12hr  (109) white prepupae 24hr  (56) pupae 2d postWPP  (58) pupae 3d postWPP  (54) pupae 4d postWPP  (514) adult male 01day  (85) adult male 05day  (105) adult male 30day  (99) adult female 01day  (82) adult female 05day  (88) adult female 30day  (89) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    95 embryo 02-04hr    90 embryo 04-06hr    59 embryo 06-08hr    22 embryo 08-10hr    34 embryo 10-12hr    26 embryo 12-14hr    21 embryo 14-16hr    19 embryo 16-18hr    27 embryo 18-20hr    52 embryo 20-22hr    71 embryo 22-24hr    87 larva L1    38 larva L2    41 larva L3 12hr old    45 larva L3 puffstage 1-2    35 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9  (136) white prepupae new  (227) white prepupae 12hr  (109) white prepupae 24hr    56 pupae 2d postWPP    58 pupae 3d postWPP    54 pupae 4d postWPP  (514) adult male 01day    85 adult male 05day  105 adult male 30day    99 adult female 01day    82 adult female 05day    88 adult female 30day    89 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    95 embryo 02-04hr    90 embryo 04-06hr    59 embryo 06-08hr    22 embryo 08-10hr    34 embryo 10-12hr    26 embryo 12-14hr    21 embryo 14-16hr    19 embryo 16-18hr    27 embryo 18-20hr    52 embryo 20-22hr    71 embryo 22-24hr    87 larva L1    38 larva L2    41 larva L3 12hr old    45 larva L3 puffstage 1-2    35 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9    136 white prepupae new    227 white prepupae 12hr    109 white prepupae 24hr    56 pupae 2d postWPP    58 pupae 3d postWPP    54 pupae 4d postWPP    514 adult male 01day    85 adult male 05day    105 adult male 30day    99 adult female 01day    82 adult female 05day    88 adult female 30day    89 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    95 embryo 02-04hr    90 embryo 04-06hr    59 embryo 06-08hr    22 embryo 08-10hr    34 embryo 10-12hr    26 embryo 12-14hr    21 embryo 14-16hr    19 embryo 16-18hr    27 embryo 18-20hr    52 embryo 20-22hr    71 embryo 22-24hr    87 larva L1    38 larva L2    41 larva L3 12hr old    45 larva L3 puffstage 1-2    35 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9    136 white prepupae new    227 white prepupae 12hr    109 white prepupae 24hr    56 pupae 2d postWPP    58 pupae 3d postWPP    54 pupae 4d postWPP    514 adult male 01day    85 adult male 05day    105 adult male 30day    99 adult female 01day    82 adult female 05day    88 adult female 30day    89 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (95) embryo 02-04hr  (90) embryo 04-06hr  (59) embryo 06-08hr    22 embryo 08-10hr  (34) embryo 10-12hr  26 embryo 12-14hr    21 embryo 14-16hr    19 embryo 16-18hr  27 embryo 18-20hr  (52) embryo 20-22hr  (71) embryo 22-24hr  (87) larva L1  (38) larva L2  (41) larva L3 12hr old  (45) larva L3 puffstage 1-2  (35) larva L3 puffstage 3-6  (57) larva L3 puffstage 7-9  (136) white prepupae new  (227) white prepupae 12hr  (109) white prepupae 24hr  (56) pupae 2d postWPP  (58) pupae 3d postWPP  (54) pupae 4d postWPP  (514) adult male 01day  (85) adult male 05day  (105) adult male 30day  (99) adult female 01day  (82) adult female 05day  (88) adult female 30day  (89) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    95 embryo 02-04hr    90 embryo 04-06hr    59 embryo 06-08hr    22 embryo 08-10hr    34 embryo 10-12hr    26 embryo 12-14hr    21 embryo 14-16hr    19 embryo 16-18hr    27 embryo 18-20hr    52 embryo 20-22hr    71 embryo 22-24hr    87 larva L1    38 larva L2    41 larva L3 12hr old    45 larva L3 puffstage 1-2    35 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9  136 white prepupae new  (227) white prepupae 12hr  109 white prepupae 24hr    56 pupae 2d postWPP    58 pupae 3d postWPP    54 pupae 4d postWPP  (514) adult male 01day    85 adult male 05day  105 adult male 30day    99 adult female 01day    82 adult female 05day    88 adult female 30day    89 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    95 embryo 02-04hr    90 embryo 04-06hr    59 embryo 06-08hr    22 embryo 08-10hr    34 embryo 10-12hr    26 embryo 12-14hr    21 embryo 14-16hr    19 embryo 16-18hr    27 embryo 18-20hr    52 embryo 20-22hr    71 embryo 22-24hr    87 larva L1    38 larva L2    41 larva L3 12hr old    45 larva L3 puffstage 1-2    35 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9    136 white prepupae new    227 white prepupae 12hr    109 white prepupae 24hr    56 pupae 2d postWPP    58 pupae 3d postWPP    54 pupae 4d postWPP    514 adult male 01day    85 adult male 05day    105 adult male 30day    99 adult female 01day    82 adult female 05day    88 adult female 30day    89 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    10 Schneider line 2 Sg4    7 embryonic 1182-4H    7 embryonic GM2    17 embryonic Kc167    32 embryonic S1    16 embryonic S3    7 leg disc CME L1    7 wing disc CME-W2    5 wing disc ML-DmD8    18 wing disc ML-DmD9    10 wing disc ML-DmD16-c3    13 wing disc ML-DmD21    43 wing disc ML-DmD32    7 haltere disc ML-DmD17-c3    147 eye-antennal disc ML-DmD11    23 antennal disc ML-DmD20-c5    8 mixed discs ML-DmD4-c1    9 CNS ML-DmBG1-c1    20 CNS ML-DmBG2-c2    16 tumorous blood cells mbn2    14 ovary fGS/OSS    97 ovary OSC    138 ovary OSS    46 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    10 Schneider line 2 Sg4    7 embryonic 1182-4H    7 embryonic GM2    17 embryonic Kc167  (32) embryonic S1    16 embryonic S3    7 leg disc CME L1    7 wing disc CME-W2    5 wing disc ML-DmD8    18 wing disc ML-DmD9    10 wing disc ML-DmD16-c3    13 wing disc ML-DmD21  (43) wing disc ML-DmD32    7 haltere disc ML-DmD17-c3  (147) eye-antennal disc ML-DmD11    23 antennal disc ML-DmD20-c5    8 mixed discs ML-DmD4-c1    9 CNS ML-DmBG1-c1    20 CNS ML-DmBG2-c2    16 tumorous blood cells mbn2    14 ovary fGS/OSS  (97) ovary OSC  (138) ovary OSS  (46) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    10 Schneider line 2 Sg4    7 embryonic 1182-4H    7 embryonic GM2    17 embryonic Kc167    32 embryonic S1    16 embryonic S3    7 leg disc CME L1    7 wing disc CME-W2    5 wing disc ML-DmD8    18 wing disc ML-DmD9    10 wing disc ML-DmD16-c3    13 wing disc ML-DmD21    43 wing disc ML-DmD32    7 haltere disc ML-DmD17-c3  (147) eye-antennal disc ML-DmD11    23 antennal disc ML-DmD20-c5    8 mixed discs ML-DmD4-c1    9 CNS ML-DmBG1-c1    20 CNS ML-DmBG2-c2    16 tumorous blood cells mbn2    14 ovary fGS/OSS    97 ovary OSC  (138) ovary OSS    46 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    10 Schneider line 2 Sg4    7 embryonic 1182-4H    7 embryonic GM2    17 embryonic Kc167    32 embryonic S1    16 embryonic S3    7 leg disc CME L1    7 wing disc CME-W2    5 wing disc ML-DmD8    18 wing disc ML-DmD9    10 wing disc ML-DmD16-c3    13 wing disc ML-DmD21    43 wing disc ML-DmD32    7 haltere disc ML-DmD17-c3    147 eye-antennal disc ML-DmD11    23 antennal disc ML-DmD20-c5    8 mixed discs ML-DmD4-c1    9 CNS ML-DmBG1-c1    20 CNS ML-DmBG2-c2    16 tumorous blood cells mbn2    14 ovary fGS/OSS    97 ovary OSC    138 ovary OSS    46 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    10 Schneider line 2 Sg4    7 embryonic 1182-4H    7 embryonic GM2    17 embryonic Kc167    32 embryonic S1    16 embryonic S3    7 leg disc CME L1    7 wing disc CME-W2    5 wing disc ML-DmD8    18 wing disc ML-DmD9    10 wing disc ML-DmD16-c3    13 wing disc ML-DmD21    43 wing disc ML-DmD32    7 haltere disc ML-DmD17-c3    147 eye-antennal disc ML-DmD11    23 antennal disc ML-DmD20-c5    8 mixed discs ML-DmD4-c1    9 CNS ML-DmBG1-c1    20 CNS ML-DmBG2-c2    16 tumorous blood cells mbn2    14 ovary fGS/OSS    97 ovary OSC    138 ovary OSS    46 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    10 Schneider line 2 Sg4    7 embryonic 1182-4H    7 embryonic GM2    17 embryonic Kc167  32 embryonic S1    16 embryonic S3    7 leg disc CME L1    7 wing disc CME-W2    5 wing disc ML-DmD8    18 wing disc ML-DmD9    10 wing disc ML-DmD16-c3    13 wing disc ML-DmD21  (43) wing disc ML-DmD32    7 haltere disc ML-DmD17-c3  (147) eye-antennal disc ML-DmD11    23 antennal disc ML-DmD20-c5    8 mixed discs ML-DmD4-c1    9 CNS ML-DmBG1-c1    20 CNS ML-DmBG2-c2    16 tumorous blood cells mbn2    14 ovary fGS/OSS  (97) ovary OSC  (138) ovary OSS  (46) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    10 Schneider line 2 Sg4    7 embryonic 1182-4H    7 embryonic GM2    17 embryonic Kc167    32 embryonic S1    16 embryonic S3    7 leg disc CME L1    7 wing disc CME-W2    5 wing disc ML-DmD8    18 wing disc ML-DmD9    10 wing disc ML-DmD16-c3    13 wing disc ML-DmD21    43 wing disc ML-DmD32    7 haltere disc ML-DmD17-c3  (147) eye-antennal disc ML-DmD11    23 antennal disc ML-DmD20-c5    8 mixed discs ML-DmD4-c1    9 CNS ML-DmBG1-c1    20 CNS ML-DmBG2-c2    16 tumorous blood cells mbn2    14 ovary fGS/OSS    97 ovary OSC  138 ovary OSS    46 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    10 Schneider line 2 Sg4    7 embryonic 1182-4H    7 embryonic GM2    17 embryonic Kc167    32 embryonic S1    16 embryonic S3    7 leg disc CME L1    7 wing disc CME-W2    5 wing disc ML-DmD8    18 wing disc ML-DmD9    10 wing disc ML-DmD16-c3    13 wing disc ML-DmD21    43 wing disc ML-DmD32    7 haltere disc ML-DmD17-c3    147 eye-antennal disc ML-DmD11    23 antennal disc ML-DmD20-c5    8 mixed discs ML-DmD4-c1    9 CNS ML-DmBG1-c1    20 CNS ML-DmBG2-c2    16 tumorous blood cells mbn2    14 ovary fGS/OSS    97 ovary OSC    138 ovary OSS    46 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    45 Cadmium 50 mM 6 hrs, larvae L3    23 Cadmium 50 mM 12 hrs, larvae L3    34 Cadmium 50 mM 48 hrs, 4-day adult    35 Cadmium 100 mM 48 hrs, 4-day adult    55 Copper 0.5 mM 12 hrs, larvae L3    17 Copper 15 mM 48 hrs, 4-day adult    47 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    50 Ethanol 2.5% 3 hrs, larvae L3    66 Ethanol 5% 3 hrs, larvae L3    41 Ethanol 10% 3 hrs, larvae L3    15 Caffeine 1.5 mg/ml 4 hrs, larvae L3    17 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    54 Caffeine 25 mg/ml 48 hrs, 4-day adult    28 Paraquat 5 mM 48 hrs, 4-day adult    64 Paraquat 10 mM 48 hrs, 4-day adult    53 Rotenone 2 μg 12 hrs, larvae L3    17 Rotenone 8 μg 12 hrs, larvae L3    18 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult  (45) Cadmium 50 mM 6 hrs, larvae L3    23 Cadmium 50 mM 12 hrs, larvae L3  (34) Cadmium 50 mM 48 hrs, 4-day adult  (35) Cadmium 100 mM 48 hrs, 4-day adult  (55) Copper 0.5 mM 12 hrs, larvae L3    17 Copper 15 mM 48 hrs, 4-day adult  (47) Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult  (50) Ethanol 2.5% 3 hrs, larvae L3  (66) Ethanol 5% 3 hrs, larvae L3  (41) Ethanol 10% 3 hrs, larvae L3    15 Caffeine 1.5 mg/ml 4 hrs, larvae L3    17 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (54) Caffeine 25 mg/ml 48 hrs, 4-day adult  (28) Paraquat 5 mM 48 hrs, 4-day adult  (64) Paraquat 10 mM 48 hrs, 4-day adult  (53) Rotenone 2 μg 12 hrs, larvae L3    17 Rotenone 8 μg 12 hrs, larvae L3    18 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    45 Cadmium 50 mM 6 hrs, larvae L3    23 Cadmium 50 mM 12 hrs, larvae L3    34 Cadmium 50 mM 48 hrs, 4-day adult    35 Cadmium 100 mM 48 hrs, 4-day adult    55 Copper 0.5 mM 12 hrs, larvae L3    17 Copper 15 mM 48 hrs, 4-day adult    47 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    50 Ethanol 2.5% 3 hrs, larvae L3    66 Ethanol 5% 3 hrs, larvae L3    41 Ethanol 10% 3 hrs, larvae L3    15 Caffeine 1.5 mg/ml 4 hrs, larvae L3    17 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    54 Caffeine 25 mg/ml 48 hrs, 4-day adult    28 Paraquat 5 mM 48 hrs, 4-day adult    64 Paraquat 10 mM 48 hrs, 4-day adult    53 Rotenone 2 μg 12 hrs, larvae L3    17 Rotenone 8 μg 12 hrs, larvae L3    18 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    45 Cadmium 50 mM 6 hrs, larvae L3    23 Cadmium 50 mM 12 hrs, larvae L3    34 Cadmium 50 mM 48 hrs, 4-day adult    35 Cadmium 100 mM 48 hrs, 4-day adult    55 Copper 0.5 mM 12 hrs, larvae L3    17 Copper 15 mM 48 hrs, 4-day adult    47 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    50 Ethanol 2.5% 3 hrs, larvae L3    66 Ethanol 5% 3 hrs, larvae L3    41 Ethanol 10% 3 hrs, larvae L3    15 Caffeine 1.5 mg/ml 4 hrs, larvae L3    17 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    54 Caffeine 25 mg/ml 48 hrs, 4-day adult    28 Paraquat 5 mM 48 hrs, 4-day adult    64 Paraquat 10 mM 48 hrs, 4-day adult    53 Rotenone 2 μg 12 hrs, larvae L3    17 Rotenone 8 μg 12 hrs, larvae L3    18 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    45 Cadmium 50 mM 6 hrs, larvae L3    23 Cadmium 50 mM 12 hrs, larvae L3    34 Cadmium 50 mM 48 hrs, 4-day adult    35 Cadmium 100 mM 48 hrs, 4-day adult    55 Copper 0.5 mM 12 hrs, larvae L3    17 Copper 15 mM 48 hrs, 4-day adult    47 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    50 Ethanol 2.5% 3 hrs, larvae L3    66 Ethanol 5% 3 hrs, larvae L3    41 Ethanol 10% 3 hrs, larvae L3    15 Caffeine 1.5 mg/ml 4 hrs, larvae L3    17 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    54 Caffeine 25 mg/ml 48 hrs, 4-day adult    28 Paraquat 5 mM 48 hrs, 4-day adult    64 Paraquat 10 mM 48 hrs, 4-day adult    53 Rotenone 2 μg 12 hrs, larvae L3    17 Rotenone 8 μg 12 hrs, larvae L3    18 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult  (45) Cadmium 50 mM 6 hrs, larvae L3    23 Cadmium 50 mM 12 hrs, larvae L3  (34) Cadmium 50 mM 48 hrs, 4-day adult  (35) Cadmium 100 mM 48 hrs, 4-day adult  (55) Copper 0.5 mM 12 hrs, larvae L3    17 Copper 15 mM 48 hrs, 4-day adult  (47) Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult  (50) Ethanol 2.5% 3 hrs, larvae L3  (66) Ethanol 5% 3 hrs, larvae L3  (41) Ethanol 10% 3 hrs, larvae L3    15 Caffeine 1.5 mg/ml 4 hrs, larvae L3    17 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (54) Caffeine 25 mg/ml 48 hrs, 4-day adult  28 Paraquat 5 mM 48 hrs, 4-day adult  (64) Paraquat 10 mM 48 hrs, 4-day adult  (53) Rotenone 2 μg 12 hrs, larvae L3    17 Rotenone 8 μg 12 hrs, larvae L3    18 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    45 Cadmium 50 mM 6 hrs, larvae L3    23 Cadmium 50 mM 12 hrs, larvae L3    34 Cadmium 50 mM 48 hrs, 4-day adult    35 Cadmium 100 mM 48 hrs, 4-day adult    55 Copper 0.5 mM 12 hrs, larvae L3    17 Copper 15 mM 48 hrs, 4-day adult    47 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    50 Ethanol 2.5% 3 hrs, larvae L3    66 Ethanol 5% 3 hrs, larvae L3    41 Ethanol 10% 3 hrs, larvae L3    15 Caffeine 1.5 mg/ml 4 hrs, larvae L3    17 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    54 Caffeine 25 mg/ml 48 hrs, 4-day adult    28 Paraquat 5 mM 48 hrs, 4-day adult    64 Paraquat 10 mM 48 hrs, 4-day adult    53 Rotenone 2 μg 12 hrs, larvae L3    17 Rotenone 8 μg 12 hrs, larvae L3    18 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    45 Cadmium 50 mM 6 hrs, larvae L3    23 Cadmium 50 mM 12 hrs, larvae L3    34 Cadmium 50 mM 48 hrs, 4-day adult    35 Cadmium 100 mM 48 hrs, 4-day adult    55 Copper 0.5 mM 12 hrs, larvae L3    17 Copper 15 mM 48 hrs, 4-day adult    47 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    50 Ethanol 2.5% 3 hrs, larvae L3    66 Ethanol 5% 3 hrs, larvae L3    41 Ethanol 10% 3 hrs, larvae L3    15 Caffeine 1.5 mg/ml 4 hrs, larvae L3    17 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    54 Caffeine 25 mg/ml 48 hrs, 4-day adult    28 Paraquat 5 mM 48 hrs, 4-day adult    64 Paraquat 10 mM 48 hrs, 4-day adult    53 Rotenone 2 μg 12 hrs, larvae L3    17 Rotenone 8 μg 12 hrs, larvae L3    18 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_04 mE1_20_mRNA_expression_cluster_02
External Data & Images
Linkouts	BDGP expression data • LD16109 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0016926 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG4710-RB FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for Pino Stages(s) 1-3 Stages(s) 4-6 Stages(s) 7-8 Stages(s) 9-10 Stages(s) 11-12
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable PinoCA07211 PinoEY06995 viable, with Scer\GAL4pnr-MD237 PinoGD10523 Sterility Allele fertile PinoEY06995 Other Phenotypes Allele behavior defective | recessive Pinosmi21F neurophysiology defective Pinosmi21F smell perception defective Pinosmi21F smell perception defective (with Df(2L)ast2) Pinosmi21F smell perception defective | female Pinosmi21F smell perception defective | male Pinosmi21F Phenotype manifest in Allele antenna Pinosmi21F
Classical Alleles ( 23 )
For All Classical Alleles Show
Allele of Pino Class Mutagen Stocks Known lesion Pino5-HA-2983 1 -- Pinoc05449 piggyBac transposase 1 -- Pinoc05497 piggyBac transposase 1 -- PinoCB-5389-3 1 -- PinoCB-5673-3 1 -- PinoCB-6826-3 1 -- Pinod03089 P-element activity 1 -- PinoEY06995 P-element activity 1 -- PinoKG01076 P-element activity 1 -- PinoMI01776 1 -- PinoMI07427 1 -- Pino5-HA-2542 0 -- Pinoc05489 piggyBac transposase 0 -- PinoCA07211 P-element activity 0 Yes Pinod00744 P-element activity 0 -- Pinod09249 P-element activity 0 -- Pinod10499 P-element activity 0 -- PinoDG03503 0 -- PinoEP2263 P-element activity 0 -- PinoEP2576 P-element activity 0 -- PinoEP434 P-element activity 0 -- PinoEP801 P-element activity 0 -- Pinosmi21F hypomorphic allele - genetic evidence Delta2-3 0 Yes
Alleles Carried on Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Pino Class Mutagen Stocks Known lesion PinoGD10523 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes PinoKK109843 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes PinoKK111419 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes PinoNIG.4710R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(2L)Exel6004 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{KK109843} NA P{KK111419} NA P{NIG.4710R} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EP}PinoEP434 NA P{EP}PinoEP801 NA P{EP}PinoEP2263 NA P{EP}PinoEP2576 NA P{EPgy2}PinoEY06995 NA P{XP}Pinod00744 NA P{XP}Pinod03089 NA P{XP}Pinod09249 NA P{XP}Pinod10499 NA miscellaneous insertions Mi{MIC}PinoMI01776 NA Mi{MIC}PinoMI07427 NA P{PTT-GA}PinoCA07211 NA P{RS3}PinoCB-5389-3 NA P{RS3}PinoCB-5673-3 NA P{RS3}PinoCB-6826-3 NA P{RS5}Pino5-HA-2542 NA P{RS5}Pino5-HA-2983 NA P{SUPor-P}PinoKG01076 NA P{wHy}PinoDG03503 NA PBac{PB}Pinoc05449 NA PBac{PB}Pinoc05489 NA PBac{PB}Pinoc05497 NA insertion of enhancer trap P{lArB}Pinosmi21F No
Gene Ontology: Function, Process & Cellular Component ( 2 unique terms )
Terms Based on Experimental Evidence ( 2 terms )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
olfactory behavior inferred from mutant phenotype (Rollmann et al., 2005, Anholt et al., 1996) regulation of response to DNA damage stimulus inferred from genetic interaction with lok (Park and Song, 2008)
Cellular Component ( 0 terms)
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Pino allele Gene References smi21F1 scrib (Fedorowicz et al., 1998) smi26D (Fedorowicz et al., 1998) smi27E (Fedorowicz et al., 1998) smi45E (Fedorowicz et al., 1998)
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 59541 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0016926 DroID - A comprehensive database of gene and protein interactions. • FBgn0016926 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 33288
Orthologs
OrthoDB Orthologs (28) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6TTH49 Dipteran inclusive ortholog search EOG6S4PRB Insect inclusive ortholog search EOG6BZKZT Arthropod inclusive ortholog search EOG6BRV2X Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (EOG6TTH49)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\Pino     Drosophila simulans   Dsim\GD22927 Y   Drosophila sechellia   Dsec\GM16627 Y   Drosophila erecta   Dere\GG24613 Y   Drosophila yakuba   Dyak\GE15777 Y   Drosophila ananassae   Dana\GF14736 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA25452 Y   Drosophila persimilis   Dper\GL15076 Y   Drosophila willistoni   Dwil\GK24368 Y   Drosophila virilis   Dvir\GJ17830 Y   Drosophila mojavensis   Dmoj\GI21963 Y   Drosophila grimshawi   Dgri\GH10567 Y
Orthologs in non-Drosophila Dipterans (EOG6S4PRB)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL007114   Anopheles gambiae Malaria mosquito  Agam\AGAP007751   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ802085
Orthologs in non-Dipteran Insects (EOG6BZKZT)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB47026   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG005211   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH19596   Atta cephalotes Leafcutter ant  Acep\ACEP12569   Camponotus floridanus Florida carpenter ant  Cflo\CFLO23248   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL20952   Linepithema humile Argentine ant  Lhum\LH21580   Pogonomyrmex barbatus Red harvester ant  Pbar\PB16227   Solenopsis invicta Red fire ant  Sinv\SINV15529   Acyrthosiphon pisum Pea aphid  Apim\ACYPI005699   Pediculus humanus Human body louse  Phum\PHUM578690   Tribolium castaneum Red flour beetle  Tcas\TC006277
Orthologs in non-Insect Arthropods (EOG6BRV2X)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Ixodes scapularis Deer tick  Isca\ISCW002533
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD22927 Drosophila sechellia Dsec\GM16627 Drosophila erecta Dere\GG24613 Drosophila yakuba Dyak\GE15777 Drosophila ananassae Dana\GF14736 Drosophila pseudoobscura pseudoobscura Dpse\GA25452 Drosophila persimilis Dper\GL15076 Drosophila willistoni Dwil\GK24368 Drosophila virilis Dvir\GJ17830 Drosophila mojavensis Dmoj\GI21963 Drosophila grimshawi Dgri\GH10567
Stocks & Reagents
Stocks Listed in FlyBase ( 15 )
Bloomington	34246 y1 w*; Mi{MIC}PinoMI01776
Harvard	- P{XP}Pinod03089 - PBac{PB}Pinoc05449 - PBac{PB}Pinoc05497
Kyoto	123600 w1118; P{RS3}PinoCB-5389-3 123748 w1118; P{RS3}PinoCB-5673-3 124233 w1118; P{RS3}PinoCB-6826-3 125762 w1118; P{RS5}Pino5-HA-2983
VDRC	v102281 P{KK111419}VIE-260B v108468 P{KK109843}VIE-260B v21530 w1118; P{GD10523}v21530 v21531 w1118; P{GD10523}v21531
	More stocks available...
Genomic Clones ( 2 )
	BACR35O22 BACR38A03 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 203 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD16109 RE71494
Other clones	FI20014
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT27346 GH09659 GH11751 GH13153 GH13630 GH15482 GH17283 GM02592 GM09094 HL02739 LD04669 LD11401 LD17781 LP03054 LP08077 LP19976 RE04313 RE08911 RE12110 RE16332 RE20115 RE21189 RE21560 RE28414 RE31334 RE36519 RE39504 RE41116 RE54544 RE57210 RE60571 RE61271 RE67144 RE67786 RE74653 RH05469 RH07722 RH21070 RH22554 RH23480 RH25813 RH32150 RH40303 RH42162 RH46507 RH51585 RH52240 RH57264 RH57640 RH60286 RH60835 RH62235 RH64333 RH68928 SD01386 SD09875 SD28033 SD28066
Other clones	59133 521972 bs20d01 Dmel_dig_009328_0639_2629 Dmel_dig_020452_0649_2807 Dmel_neb_015126_0641_1453 EC22886 EC29286 EC054188 EC054700 EK183759 EK224328 EK242750 EK278001 EK307918 EN01116 EN15208 FGM318H06 LD27522 RH25674 RP003003485 RP003003955 RP003004759 RP003011706 RP003016923 RP003017629 RP003018270 RP003024291 RP003029321 RP003029907 RP003031307 RP003036022 RP003038161 RP003044437 RP003050692 RP003054412 RP003054776 RP003055963 RP003058173 RP003059572 RP003069242 RP003076977 RP003083198 RP003087025 RP003087665 RP003088047 RP003097629 RP003107375 RP003117160 RP003119127 RP003127670 RP003128536 RP003129338 RP003158908 RP003162853 RP003164701 RP003175024 RP003175537 RP003179161 RP003182817 RP003185262 RP003186796 RP003189482 RP003190957 RP003203128 RP003204207 RP003212787 RP003227742 RP003228940 RP003230469 RP003233510 RP003236878 RP003244177 RP003249659 RP003254266 RP003262492 RP003264393 RP003266815 RP003271345 RP003280519 RP003287281 RP003287517 RP003293987 RP003296427 RP003300774 RP003303918 RP003324165 RP003331660 RP003332340 RP003337200 RP003343964 RP003346114 RP003346191 RP003356909 RP003369650 RP003374892 RP003375961 RP003391858 RP003395051 RP003399791 RP003405666 RP003405703 RP003409714 RP003410210 RP003414552 RP003422148 RP003422662 RP003424630 RP003425474 RP003435749 RP003437693 RP003442572 RP003460871 RP003461645 RP003469243 RP003474325 RP003477344 RP003478926 RP003482025 RP003496539 RP003500466 RP003504159 RP003508464 RP003510981 RP003513688 RP003513918 RP003514149 RP003514671 RP003515513 RP003516208 RP003530797 RP003537009 RP003591113 RP003593335 RP003598249 RP003598559 RP003609786 RP003611859 RP003621167 RP003680444 RP003682625 UUGC0521
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0016926 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 33288
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: Pino smi21F (Rollmann et al., 2005)
Source for database merge of	Source for merge of: smi21F anon-WO0118547.131 (FlyBase, 1996-) Source for merge of: smi21F CG4710 (Anholt et al., 2003)
Additional comments	Source for merge of smi21F anon-WO0118547.131 was sequence comparison (date:051113). (FlyBase, 1996-)
Other Comments
	Area matching Drosophila EST AA392519. This EST forms 758bp contig with ESTS AA695318 and AA441243. (Davies, 2001.3.15) Identified during a screen for olfactory mutants. (Anholt et al., 1996)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_134724 NM_164405 NM_001272925 RefSeq (Proteins) • NP_608568 NP_722679 NP_001259854 DDBJ / EMBL / GenBank • AA392519 AA441243 AAF51417 AAF51418 AAL39592 AAN71488 AGB92391 AI110163 AI946060 AQ026003 AQ073441 AQ073700 AQ254812 AW942396 AX094007 AY069447 BH614850 BH614851 BH854566 BI577761 BT001733 CL705928 CZ469987 CZ470029 CZ470037 CZ471778 CZ473171 CZ476639 CZ477292 Entrez Gene - A searchable database of RefSeq genes. • 33288 UniProtKB/TrEMBL • Q8IGK9 Q8T0A4 Q9VPW8
Other Crossreferences
	BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • LD16109
Linkouts
	BioGRID - A database of protein and genetic interactions • 59541 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0016926 DroID - A comprehensive database of gene and protein interactions. • FBgn0016926 DRSC - Results from RNAi screens. • FBgn0016926 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0016926 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG4710-RB FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0016926 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 33288 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 33288 modMine - Data generated by the modENCODE project. • FBgn0016926
Synonyms & Secondary IDs ( 9 )
Reported As
Symbol Synonym	anon-WO0118547.131   CG4710 (Anholt, 2004, Anholt et al., 2003, Rollmann et al., 2005, Qin et al., 2005, Keleman et al., 2009.8.5) Pino (Rollmann et al., 2005, Zhou et al., 2009) smi21F (Rollmann et al., 2005, Buszczak et al., 2007, Zhou et al., 2009, Beckstead et al., 2007, Japanese National Institute of Genetics, 2012.5.21)
Name Synonym	Pinocchio (Rollmann et al., 2005, Morozova et al., 2006, Felix et al., 2012) pinocchio (Kong et al., 2010) smell impaired 21F (Anholt et al., 1996) smell impaired 21 F (Park and Song, 2008) smell imparied 21 F (Park and Song, 2008)
Secondary FlyBase IDs
	FBgn0031303 FBgn0062225
References ( 37 )
Generate a list of	All references relating to this gene ( 37 )
List References by type	Research paper  ( 13 ) Supplementary material  ( 4 ) Review  ( 1 ) Personal communication to FlyBase  ( 11 ) Abstract  ( 1 ) FlyBase analysis  ( 3 ) Stock list  ( 1 ) Patent  ( 1 ) DNA/RNA sequence record  ( 1 ) Website  ( 1 )
Recent research papers ( 1 )
	Felix et al., 2012, Genetics 191(3): 989--1002 Age-Specific Variation in Immune Response in Drosophila melanogaster Has a Genetic Basis. [FBrf0218944] Show all research papers ...
Recent reviews (0)
	All reviews listed in FlyBase were published before 2011 Show reviews ...