A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\smi35A

General Information
SymbolDmel\smi35ASpeciesD. melanogaster
Namesmell impaired 35AAnnotation symbolCG4551
Feature typeprotein_coding_geneFlyBase IDFBgn0016930
Gene Model StatusCurrent Stock availability 13 publicly available
Also Known AsdDYRK2, Dyrk2, DYRK, BG:DS01523.3
Genomic Location
Chromosome (arm)2LRecombination map
Cytogenetic map35A1-35A2Sequence location2L:14,184,478..14,234,108 [-]

Genomic Maps

GBrowse View Help
modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene smell impaired 35A is referred to in FlyBase by the symbol Dmel\smi35A (CG4551, FBgn0016930). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: protein serine/threonine kinase activity; ATP binding; transferase activity. There is experimental evidence that it is involved in the biological process: olfactory behavior; protein phosphorylation. 18 alleles are reported. No phenotypic data is available. It has 5 annotated transcripts and 5 annotated polypeptides. Protein features are: Protein kinase, ATP binding site; Protein kinase, catalytic domain; Protein kinase-like domain; Serine/threonine-protein kinase, active site; Serine/threonine-protein kinase, catalytic domain; Serine/threonine-protein kinase-like domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of low expression. Peak expression observed during early pupal stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, adult heart, adult salivary gland. Comments on Affy2 ProbeSet: ProbeSet 1625183_at completely aligns to an exonic region common to each of the 5 FlyBase-annotated transcript isoforms of smi35A. Gene sequence location is 2L:14184478..14234108.

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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2012_01
References
Sequence features
FB2011_10
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
35A1-35A2  
Limits computationally determined from genome sequence between P{lacW}l(2)34Fak00811&P{PZ}wb09437 and P{EP}elBEP2039&P{PZ}osprJ571  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
35A1-35A2  
(determined by in situ hybridisation) 34F3--4 (determined by in situ hybridisation)  
34F3-34F4  
(determined by in situ hybridisation)  
35A-35A  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\smi35A for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0089289 FBtr0100447 FBtr0089288 FBtr0089290 FBtr0100448 FBpp0099869 FBpp0089219 FBpp0089218 FBpp0088344 FBpp0099870 FBti0124792 FBti0036952 FBti0053817 FBti0046611 FBti0067233 FBti0044302 FBti0008735 FBti0046509 FBti0067224 FBti0036220 FBti0046439 FBti0070617 FBti0069946 FBti0109970 FBti0017690 FBti0074750 FBti0054777 FBti0036664 FBti0113454 FBti0036927 FBti0054322 FBti0111308 FBti0059069 FBti0107767 FBti0105548
Comments on Gene Model
EST data support existence of additional transcripts due to variable use of mini-exons.
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0089288
  4585
  722
FBtr0089289
  4659
  722
FBtr0089290
  4663
  722
FBtr0100447
  4417
  722
FBtr0100448
  4590
  722
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0088344  
79.6  
722  
9.21  
FBpp0089218  
79.6  
722  
9.21  
FBpp0089219  
79.6  
722  
9.21  
FBpp0099869  
79.6  
722  
9.21  
FBpp0099870  
79.6  
722  
9.21  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view smi35A-RB smi35A-RD smi35A-RA smi35A-RC smi35A-RE
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0016930


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0016930
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of low expression. Peak expression observed during early pupal stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0016930 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 1323
embryo 02-04hr
 
 2329
embryo 04-06hr
 
 2072
embryo 06-08hr
 
 2859
embryo 08-10hr
 
 3765
embryo 10-12hr
 
 3964
embryo 12-14hr
 
 4245
embryo 14-16hr
 
 4539
embryo 16-18hr
 
 3474
embryo 18-20hr
 
 1931
embryo 20-22hr
 
 1591
embryo 22-24hr
 
 1658
larva L1
 
 635
larva L2
 
 554
larva L3 12hr old
 
 339
larva L3 puffstage 1-2
 
 256
larva L3 puffstage 3-6
 
 809
larva L3 puffstage 7-9
 
 3018
white prepupae new
 
 10123
white prepupae 12hr
 
 5015
white prepupae 24hr
 
 4175
pupae 2d postWPP
 
 4394
pupae 3d postWPP
 
 2413
pupae 4d postWPP
 
 6698
adult male 01day
 
 1826
adult male 05day
 
 929
adult male 30day
 
 841
adult female 01day
 
 1740
adult female 05day
 
 1122
adult female 30day
 
 1022
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (1323)
embryo 02-04hr
 (2329)
embryo 04-06hr
 (2072)
embryo 06-08hr
 (2859)
embryo 08-10hr
 (3765)
embryo 10-12hr
 (3964)
embryo 12-14hr
 (4245)
embryo 14-16hr
 (4539)
embryo 16-18hr
 (3474)
embryo 18-20hr
 (1931)
embryo 20-22hr
 (1591)
embryo 22-24hr
 (1658)
larva L1
 (635)
larva L2
 (554)
larva L3 12hr old
 (339)
larva L3 puffstage 1-2
 (256)
larva L3 puffstage 3-6
 (809)
larva L3 puffstage 7-9
 (3018)
white prepupae new
 (10123)
white prepupae 12hr
 (5015)
white prepupae 24hr
 (4175)
pupae 2d postWPP
 (4394)
pupae 3d postWPP
 (2413)
pupae 4d postWPP
 (6698)
adult male 01day
 (1826)
adult male 05day
 (929)
adult male 30day
 (841)
adult female 01day
 (1740)
adult female 05day
 (1122)
adult female 30day
 (1022)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1323
embryo 02-04hr
 (2329)
embryo 04-06hr
 (2072)
embryo 06-08hr
 (2859)
embryo 08-10hr
 (3765)
embryo 10-12hr
 (3964)
embryo 12-14hr
 (4245)
embryo 14-16hr
 (4539)
embryo 16-18hr
 (3474)
embryo 18-20hr
 (1931)
embryo 20-22hr
 (1591)
embryo 22-24hr
 (1658)
larva L1
 
 635
larva L2
 
 554
larva L3 12hr old
 
 339
larva L3 puffstage 1-2
 
 256
larva L3 puffstage 3-6
 
 809
larva L3 puffstage 7-9
 (3018)
white prepupae new
 (10123)
white prepupae 12hr
 (5015)
white prepupae 24hr
 (4175)
pupae 2d postWPP
 (4394)
pupae 3d postWPP
 (2413)
pupae 4d postWPP
 (6698)
adult male 01day
 (1826)
adult male 05day
 
 929
adult male 30day
 
 841
adult female 01day
 (1740)
adult female 05day
 
 1122
adult female 30day
 
 1022
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1323
embryo 02-04hr
 
 2329
embryo 04-06hr
 
 2072
embryo 06-08hr
 
 2859
embryo 08-10hr
 
 3765
embryo 10-12hr
 
 3964
embryo 12-14hr
 
 4245
embryo 14-16hr
 
 4539
embryo 16-18hr
 
 3474
embryo 18-20hr
 
 1931
embryo 20-22hr
 
 1591
embryo 22-24hr
 
 1658
larva L1
 
 635
larva L2
 
 554
larva L3 12hr old
 
 339
larva L3 puffstage 1-2
 
 256
larva L3 puffstage 3-6
 
 809
larva L3 puffstage 7-9
 
 3018
white prepupae new
 10123
white prepupae 12hr
 
 5015
white prepupae 24hr
 
 4175
pupae 2d postWPP
 
 4394
pupae 3d postWPP
 
 2413
pupae 4d postWPP
 
 6698
adult male 01day
 
 1826
adult male 05day
 
 929
adult male 30day
 
 841
adult female 01day
 
 1740
adult female 05day
 
 1122
adult female 30day
 
 1022
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1323
embryo 02-04hr
 
 2329
embryo 04-06hr
 
 2072
embryo 06-08hr
 
 2859
embryo 08-10hr
 
 3765
embryo 10-12hr
 
 3964
embryo 12-14hr
 
 4245
embryo 14-16hr
 
 4539
embryo 16-18hr
 
 3474
embryo 18-20hr
 
 1931
embryo 20-22hr
 
 1591
embryo 22-24hr
 
 1658
larva L1
 
 635
larva L2
 
 554
larva L3 12hr old
 
 339
larva L3 puffstage 1-2
 
 256
larva L3 puffstage 3-6
 
 809
larva L3 puffstage 7-9
 
 3018
white prepupae new
 
 10123
white prepupae 12hr
 
 5015
white prepupae 24hr
 
 4175
pupae 2d postWPP
 
 4394
pupae 3d postWPP
 
 2413
pupae 4d postWPP
 
 6698
adult male 01day
 
 1826
adult male 05day
 
 929
adult male 30day
 
 841
adult female 01day
 
 1740
adult female 05day
 
 1122
adult female 30day
 
 1022
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0016930 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 1323
embryo 02-04hr
 
 2329
embryo 04-06hr
 
 2072
embryo 06-08hr
 
 2859
embryo 08-10hr
 
 3765
embryo 10-12hr
 
 3964
embryo 12-14hr
 
 4245
embryo 14-16hr
 
 4539
embryo 16-18hr
 
 3474
embryo 18-20hr
 
 1931
embryo 20-22hr
 
 1591
embryo 22-24hr
 
 1658
larva L1
 
 635
larva L2
 
 554
larva L3 12hr old
 
 339
larva L3 puffstage 1-2
 
 256
larva L3 puffstage 3-6
 
 809
larva L3 puffstage 7-9
 
 3018
white prepupae new
 
 10123
white prepupae 12hr
 
 5015
white prepupae 24hr
 
 4175
pupae 2d postWPP
 
 4394
pupae 3d postWPP
 
 2413
pupae 4d postWPP
 
 6698
adult male 01day
 
 1826
adult male 05day
 
 929
adult male 30day
 
 841
adult female 01day
 
 1740
adult female 05day
 
 1122
adult female 30day
 
 1022
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (1323)
embryo 02-04hr
 (2329)
embryo 04-06hr
 (2072)
embryo 06-08hr
 (2859)
embryo 08-10hr
 (3765)
embryo 10-12hr
 (3964)
embryo 12-14hr
 (4245)
embryo 14-16hr
 (4539)
embryo 16-18hr
 (3474)
embryo 18-20hr
 (1931)
embryo 20-22hr
 (1591)
embryo 22-24hr
 (1658)
larva L1
 (635)
larva L2
 (554)
larva L3 12hr old
 (339)
larva L3 puffstage 1-2
 (256)
larva L3 puffstage 3-6
 (809)
larva L3 puffstage 7-9
 (3018)
white prepupae new
 (10123)
white prepupae 12hr
 (5015)
white prepupae 24hr
 (4175)
pupae 2d postWPP
 (4394)
pupae 3d postWPP
 (2413)
pupae 4d postWPP
 (6698)
adult male 01day
 (1826)
adult male 05day
 (929)
adult male 30day
 (841)
adult female 01day
 (1740)
adult female 05day
 (1122)
adult female 30day
 (1022)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1323
embryo 02-04hr
 2329
embryo 04-06hr
 2072
embryo 06-08hr
 (2859)
embryo 08-10hr
 (3765)
embryo 10-12hr
 (3964)
embryo 12-14hr
 (4245)
embryo 14-16hr
 (4539)
embryo 16-18hr
 (3474)
embryo 18-20hr
 1931
embryo 20-22hr
 1591
embryo 22-24hr
 1658
larva L1
 
 635
larva L2
 
 554
larva L3 12hr old
 
 339
larva L3 puffstage 1-2
 
 256
larva L3 puffstage 3-6
 
 809
larva L3 puffstage 7-9
 (3018)
white prepupae new
 (10123)
white prepupae 12hr
 (5015)
white prepupae 24hr
 (4175)
pupae 2d postWPP
 (4394)
pupae 3d postWPP
 2413
pupae 4d postWPP
 (6698)
adult male 01day
 1826
adult male 05day
 
 929
adult male 30day
 
 841
adult female 01day
 1740
adult female 05day
 
 1122
adult female 30day
 
 1022
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1323
embryo 02-04hr
 
 2329
embryo 04-06hr
 
 2072
embryo 06-08hr
 
 2859
embryo 08-10hr
 
 3765
embryo 10-12hr
 
 3964
embryo 12-14hr
 
 4245
embryo 14-16hr
 
 4539
embryo 16-18hr
 
 3474
embryo 18-20hr
 
 1931
embryo 20-22hr
 
 1591
embryo 22-24hr
 
 1658
larva L1
 
 635
larva L2
 
 554
larva L3 12hr old
 
 339
larva L3 puffstage 1-2
 
 256
larva L3 puffstage 3-6
 
 809
larva L3 puffstage 7-9
 
 3018
white prepupae new
 10123
white prepupae 12hr
 
 5015
white prepupae 24hr
 
 4175
pupae 2d postWPP
 
 4394
pupae 3d postWPP
 
 2413
pupae 4d postWPP
 
 6698
adult male 01day
 
 1826
adult male 05day
 
 929
adult male 30day
 
 841
adult female 01day
 
 1740
adult female 05day
 
 1122
adult female 30day
 
 1022
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1323
embryo 02-04hr
 
 2329
embryo 04-06hr
 
 2072
embryo 06-08hr
 
 2859
embryo 08-10hr
 
 3765
embryo 10-12hr
 
 3964
embryo 12-14hr
 
 4245
embryo 14-16hr
 
 4539
embryo 16-18hr
 
 3474
embryo 18-20hr
 
 1931
embryo 20-22hr
 
 1591
embryo 22-24hr
 
 1658
larva L1
 
 635
larva L2
 
 554
larva L3 12hr old
 
 339
larva L3 puffstage 1-2
 
 256
larva L3 puffstage 3-6
 
 809
larva L3 puffstage 7-9
 
 3018
white prepupae new
 
 10123
white prepupae 12hr
 
 5015
white prepupae 24hr
 
 4175
pupae 2d postWPP
 
 4394
pupae 3d postWPP
 
 2413
pupae 4d postWPP
 
 6698
adult male 01day
 
 1826
adult male 05day
 
 929
adult male 30day
 
 841
adult female 01day
 
 1740
adult female 05day
 
 1122
adult female 30day
 
 1022
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0016930


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0016930
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, adult heart, adult salivary gland.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0016930 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 410.925
Larval Midgut
 
 47.5
Larval Hindgut
 
 30.9
Larval Malpighian Tubules
 
 12.6
Larval Fat Body
 
 94.8
Larval Salivary Gland
 
 17.5
Larval Trachea
 
 79.35
Larval Carcass
 
 96.7
Adult Head
 
 225.7
Adult Eye
 
 317.225
Adult Brain
 
 437.8
Adult Thoracic-Abdominal Ganglion
 
 457.7
Adult Crop
 
 129
Adult Midgut
 
 68.1
Adult Hindgut
 
 45
Adult Malpighian Tubules
 
 22.3
Adult Fat Body
 
 25.5
Adult Salivary Gland
 
 118.9
Adult Heart
 
 109.225
Adult VirginFemale Spermatheca
 
 39.6
Adult InseminatedFemale Spermatheca
 
 43.3
Adult Ovary
 
 54.8
Adult Testis
 
 54.2
Adult Male Accessory Gland
 
 34.9
Adult Carcass
 
 43.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 410.925
Larval Midgut
 
 47.5
Larval Hindgut
 
 30.9
Larval Malpighian Tubules
 
 12.6
Larval Fat Body
 
 94.8
Larval Salivary Gland
 
 17.5
Larval Trachea
 
 79.35
Larval Carcass
 
 96.7
Adult Head
 
 225.7
Adult Eye
 
 317.225
Adult Brain
 
 437.8
Adult Thoracic-Abdominal Ganglion
 
 457.7
Adult Crop
 
 129
Adult Midgut
 
 68.1
Adult Hindgut
 
 45
Adult Malpighian Tubules
 
 22.3
Adult Fat Body
 
 25.5
Adult Salivary Gland
 
 118.9
Adult Heart
 
 109.225
Adult VirginFemale Spermatheca
 
 39.6
Adult InseminatedFemale Spermatheca
 
 43.3
Adult Ovary
 
 54.8
Adult Testis
 
 54.2
Adult Male Accessory Gland
 
 34.9
Adult Carcass
 
 43.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 410.925
Larval Midgut
 
 47.5
Larval Hindgut
 
 30.9
Larval Malpighian Tubules
 
 12.6
Larval Fat Body
 
 94.8
Larval Salivary Gland
 
 17.5
Larval Trachea
 
 79.35
Larval Carcass
 
 96.7
Adult Head
 
 225.7
Adult Eye
 
 317.225
Adult Brain
 
 437.8
Adult Thoracic-Abdominal Ganglion
 
 457.7
Adult Crop
 
 129
Adult Midgut
 
 68.1
Adult Hindgut
 
 45
Adult Malpighian Tubules
 
 22.3
Adult Fat Body
 
 25.5
Adult Salivary Gland
 
 118.9
Adult Heart
 
 109.225
Adult VirginFemale Spermatheca
 
 39.6
Adult InseminatedFemale Spermatheca
 
 43.3
Adult Ovary
 
 54.8
Adult Testis
 
 54.2
Adult Male Accessory Gland
 
 34.9
Adult Carcass
 
 43.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 410.925
Larval Midgut
 
 47.5
Larval Hindgut
 
 30.9
Larval Malpighian Tubules
 
 12.6
Larval Fat Body
 
 94.8
Larval Salivary Gland
 
 17.5
Larval Trachea
 
 79.35
Larval Carcass
 
 96.7
Adult Head
 
 225.7
Adult Eye
 
 317.225
Adult Brain
 
 437.8
Adult Thoracic-Abdominal Ganglion
 
 457.7
Adult Crop
 
 129
Adult Midgut
 
 68.1
Adult Hindgut
 
 45
Adult Malpighian Tubules
 
 22.3
Adult Fat Body
 
 25.5
Adult Salivary Gland
 
 118.9
Adult Heart
 
 109.225
Adult VirginFemale Spermatheca
 
 39.6
Adult InseminatedFemale Spermatheca
 
 43.3
Adult Ovary
 
 54.8
Adult Testis
 
 54.2
Adult Male Accessory Gland
 
 34.9
Adult Carcass
 
 43.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0016930 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 410.925
Larval Midgut
 
 47.5
Larval Hindgut
 
 30.9
Larval Malpighian Tubules
 
 12.6
Larval Fat Body
 
 94.8
Larval Salivary Gland
 
 17.5
Larval Trachea
 
 79.35
Larval Carcass
 
 96.7
Adult Head
 
 225.7
Adult Eye
 
 317.225
Adult Brain
 
 437.8
Adult Thoracic-Abdominal Ganglion
 
 457.7
Adult Crop
 
 129
Adult Midgut
 
 68.1
Adult Hindgut
 
 45
Adult Malpighian Tubules
 
 22.3
Adult Fat Body
 
 25.5
Adult Salivary Gland
 
 118.9
Adult Heart
 
 109.225
Adult VirginFemale Spermatheca
 
 39.6
Adult InseminatedFemale Spermatheca
 
 43.3
Adult Ovary
 
 54.8
Adult Testis
 
 54.2
Adult Male Accessory Gland
 
 34.9
Adult Carcass
 
 43.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 410.925
Larval Midgut
 
 47.5
Larval Hindgut
 
 30.9
Larval Malpighian Tubules
 
 12.6
Larval Fat Body
 
 94.8
Larval Salivary Gland
 
 17.5
Larval Trachea
 
 79.35
Larval Carcass
 
 96.7
Adult Head
 
 225.7
Adult Eye
 
 317.225
Adult Brain
 
 437.8
Adult Thoracic-Abdominal Ganglion
 
 457.7
Adult Crop
 
 129
Adult Midgut
 
 68.1
Adult Hindgut
 
 45
Adult Malpighian Tubules
 
 22.3
Adult Fat Body
 
 25.5
Adult Salivary Gland
 
 118.9
Adult Heart
 
 109.225
Adult VirginFemale Spermatheca
 
 39.6
Adult InseminatedFemale Spermatheca
 
 43.3
Adult Ovary
 
 54.8
Adult Testis
 
 54.2
Adult Male Accessory Gland
 
 34.9
Adult Carcass
 
 43.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 410.925
Larval Midgut
 
 47.5
Larval Hindgut
 
 30.9
Larval Malpighian Tubules
 
 12.6
Larval Fat Body
 
 94.8
Larval Salivary Gland
 
 17.5
Larval Trachea
 
 79.35
Larval Carcass
 
 96.7
Adult Head
 
 225.7
Adult Eye
 
 317.225
Adult Brain
 
 437.8
Adult Thoracic-Abdominal Ganglion
 
 457.7
Adult Crop
 
 129
Adult Midgut
 
 68.1
Adult Hindgut
 
 45
Adult Malpighian Tubules
 
 22.3
Adult Fat Body
 
 25.5
Adult Salivary Gland
 
 118.9
Adult Heart
 
 109.225
Adult VirginFemale Spermatheca
 
 39.6
Adult InseminatedFemale Spermatheca
 
 43.3
Adult Ovary
 
 54.8
Adult Testis
 
 54.2
Adult Male Accessory Gland
 
 34.9
Adult Carcass
 
 43.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 410.925
Larval Midgut
 
 47.5
Larval Hindgut
 
 30.9
Larval Malpighian Tubules
 
 12.6
Larval Fat Body
 
 94.8
Larval Salivary Gland
 
 17.5
Larval Trachea
 
 79.35
Larval Carcass
 
 96.7
Adult Head
 
 225.7
Adult Eye
 
 317.225
Adult Brain
 
 437.8
Adult Thoracic-Abdominal Ganglion
 
 457.7
Adult Crop
 
 129
Adult Midgut
 
 68.1
Adult Hindgut
 
 45
Adult Malpighian Tubules
 
 22.3
Adult Fat Body
 
 25.5
Adult Salivary Gland
 
 118.9
Adult Heart
 
 109.225
Adult VirginFemale Spermatheca
 
 39.6
Adult InseminatedFemale Spermatheca
 
 43.3
Adult Ovary
 
 54.8
Adult Testis
 
 54.2
Adult Male Accessory Gland
 
 34.9
Adult Carcass
 
 43.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 225.7
 
NA 
Eye
 
 317.225
 
NA 
Brain
 
 437.8
 
410.925 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 457.7
 
NA 
Crop
 
 129
 
47.5 
Midgut
 
 68.1
 
30.9 
Hindgut
 
 45
 
12.6 
Malpighian Tubules
 
 22.3
 
94.8 
Fat Body
 
 25.5
 
17.5 
Salivary Gland
 
 118.9
 
NA 
Heart
 
 109.225
 
79.35 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 39.6
 
NA 
InseminatedFemale Spermatheca
 
 43.3
 
NA 
Ovary
 
 54.8
 
NA 
Testis
 
 54.2
 
NA 
Male Accessory Gland
 
 34.9
 
96.7 
Carcass
 
 43.4

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 15 )
For All Classical Alleles Show

Allele of smi35AClassMutagenStocksKnown lesion
smi35Af041692 --
smi35A11 Yes
smi35Ac02848
1 --
smi35Ae00446
1 --
smi35Ae00552
1 --
smi35Ae00726
1 --
smi35Af08067
1 --
smi35ANP6341
1 --
smi35Ad08380
0 --
smi35Ad11292
0 --
smi35Ae04686
0 --
smi35Af00009
0 --
smi35Ak069010 Yes
smi35Ak115090 Yes
smi35Ak167160 Yes
hide Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show

Allele of smi35AClassMutagenStocksKnown lesion
smi35AGD113472 Yes
smi35AGL003131 Yes
smi35AKK1088321 Yes
hide Aneuploid Aberrations
Disrupted in
Not disrupted in
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Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
insertion of enhancer trap binary system
insertion of mobile activating element
hide Gene Ontology: Function, Process & Cellular Component ( 8 unique terms )
hide Terms Based on Experimental Evidence ( 7 terms )
Molecular Function
CV term
References
inferred from direct assay
(assigned by UniProtKB)
inferred from direct assay
(assigned by UniProtKB)
inferred from direct assay
(assigned by UniProtKB)
inferred from direct assay
(assigned by UniProtKB)
Biological Process
CV term
References
inferred from mutant phenotype
inferred from direct assay
(assigned by UniProtKB)
Cellular Component
CV term
References
inferred from direct assay
(assigned by UniProtKB)
hide Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term
References
Biological Process
CV term
References
non-traceable author statement
Cellular Component ( 0 terms)
hide Sequence Ontology: Class of Gene
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hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
smi35A allele
Gene
References
hide External Data
Linkouts
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
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hide Stocks Listed in FlyBase ( 13 )
Bloomington
Harvard
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 191 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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Source for database identity of
Source for identity of: smi35A CG4551
Source for database merge of
Additional comments
The relationship between the "smi35A" mutation and the "DYRK2" transcription unit is unclear; the "smi35A" mutation was isolated in a P-element mutagenesis screen as a mutation with an olfaction defective phenotype and "DYRK2" was considered to be the protein product of "smi35A" based on the location of the P-element (P{lacW}smi35Ak11509) in the mutant line. However, the smell-impaired phenotype can be lost in P{lacW}smi35Ak11509 flies and P{lacW}smi35Ak11509 embryos show normal expression and tyrosine-phosphorylation of "DYRK2". Further analysis is therefore needed to demonstrate that the "smi35A" phenotype is attributable to the "DYRK2" gene.
hide Other Comments
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
Area matching Drosophila ESTs AA440852 and AA541034.
Identified during a screen for olfactory mutants.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 9 )
Reported As
Symbol Synonym
Name Synonym
Dual specificity tyrosine phosphorylation-regulated kinase
Secondary FlyBase IDs
  • FBgn0027884
hide References ( 51 )
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hide Recent research papers ( 2 )
Blanco et al., 2010, BMC Dev. Biol. 10: 94
Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812]
Reis et al., 2010, PLoS Genet. 6(11): e1001206
A buoyancy-based screen of Drosophila larvae for fat-storage mutants reveals a role for sir2 in coupling fat storage to nutrient availability. [FBrf0212335]
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All reviews listed in FlyBase were published before 2010