A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\ari-1

General Information
SymbolDmel\ari-1SpeciesD. melanogaster
NameariadneAnnotation symbolCG5659
Feature typeprotein_coding_geneFlyBase IDFBgn0017418
Gene Model StatusCurrent Stock availability 9 publicly available
Also Known Asari, HL-V
Genomic Location
Chromosome (arm)XRecombination map1-57.6--58.7
Cytogenetic map16F7-16F7Sequence locationX:18,024,444..18,031,682 [-]

Genomic Maps

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Automatically generated summary

See sections below for more information
The gene ariadne is referred to in FlyBase by the symbol Dmel\ari-1 (CG5659, FBgn0017418). It is a protein_coding_gene from Drosophila melanogaster. It is reported to have molecular function: ubiquitin-protein ligase activity. The biological processes in which it is involved are not known. 14 alleles are reported. The phenotypes of these alleles are annotated with: mesothoracic extracoxal depressor muscle 66; germline cyst; thoracico-abdominal ganglion; ovariole; optic lobe; macrochaeta; coxal tergal remotor muscle; adult brain; cervical connective. It has 4 annotated transcripts and 4 annotated polypeptides. Protein features are: Tetracycline transcriptional regulator, TetR-like, C-terminal; Zinc finger, C3HC4 RING-type; Zinc finger, C6HC-type; Zinc finger, RING-type; Zinc finger, RING/FYVE/PHD-type. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult brain, larval hindgut, adult ovary. Comments on Affy2 ProbeSet: ProbeSet 1628016_s_at completely aligns to an exonic region common to each of the 3 FlyBase-annotated transcript isoforms of ari-1. Gene sequence location is X:18024444..18031682.

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Description
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What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2011_10
References
FB2012_01
References
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
16F7-16F7  
Limits computationally determined from genome sequence between P{EP}EP970 and P{EP}ari-1EP317  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
1-57.6--58.7
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\ari-1 for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0305281 FBtr0089507 FBtr0089508 FBtr0306057 FBtr0089506 FBtr0306280 FBtr0306281 FBpp0293824 FBpp0297199 FBpp0088500 FBpp0089023 FBpp0088499 FBpp0297391 FBpp0297390 FBti0038867 FBti0033133 FBti0034150 FBti0007286 FBti0071450 FBti0067051 FBti0048544 FBti0029311 FBti0055541 FBti0048521
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0089506
  2636
  503
FBtr0089507
  2610
  503
FBtr0089508
  2672
  503
FBtr0306057
 
  4047
  503
Additional Transcript Data & Comments
Reported size (kB)
4.3 (northern blot)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0088499  
58.9  
503  
5.01  
FBpp0088500  
58.9  
503  
5.01  
FBpp0089023  
58.9  
503  
5.01  
FBpp0297199  
58.9  
503  
5.01  
 
 
Additional Polypeptide Data & Comments
Reported size (kDa)
503 (aa); 59 (kD observed); 59 (kD predicted)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
ari-1 transcripts are detected at all developmental stages, with levels increasing from embryogenesis onwards. The peak is reached at metamorphosis and maintained in adults. ari-1 is detected in all tissues, with high levels in the adult CNS and female gonads.
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
western blot
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Although ari-1 protein is detected mainly in the cytoplasm in Western blots of nuclear vs. cytoplasm enriched fractions, it does contain a putative nuclear localization signal.
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view CG43133-RA ari-1-RB ari-1-RC ari-1-RD ari-1-RA CG43229-RA CG43229-RB
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0017418


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0017418
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0017418 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 4523
embryo 02-04hr
 
 5146
embryo 04-06hr
 
 1930
embryo 06-08hr
 
 2270
embryo 08-10hr
 
 2749
embryo 10-12hr
 
 2342
embryo 12-14hr
 
 2450
embryo 14-16hr
 
 2668
embryo 16-18hr
 
 2558
embryo 18-20hr
 
 2135
embryo 20-22hr
 
 2437
embryo 22-24hr
 
 2437
larva L1
 
 1137
larva L2
 
 1062
larva L3 12hr old
 
 1009
larva L3 puffstage 1-2
 
 886
larva L3 puffstage 3-6
 
 1986
larva L3 puffstage 7-9
 
 2898
white prepupae new
 
 3150
white prepupae 12hr
 
 2399
white prepupae 24hr
 
 1740
pupae 2d postWPP
 
 1558
pupae 3d postWPP
 
 1674
pupae 4d postWPP
 
 2085
adult male 01day
 
 2799
adult male 05day
 
 2271
adult male 30day
 
 1419
adult female 01day
 
 2559
adult female 05day
 
 2862
adult female 30day
 
 2623
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (4523)
embryo 02-04hr
 (5146)
embryo 04-06hr
 (1930)
embryo 06-08hr
 (2270)
embryo 08-10hr
 (2749)
embryo 10-12hr
 (2342)
embryo 12-14hr
 (2450)
embryo 14-16hr
 (2668)
embryo 16-18hr
 (2558)
embryo 18-20hr
 (2135)
embryo 20-22hr
 (2437)
embryo 22-24hr
 (2437)
larva L1
 (1137)
larva L2
 (1062)
larva L3 12hr old
 (1009)
larva L3 puffstage 1-2
 (886)
larva L3 puffstage 3-6
 (1986)
larva L3 puffstage 7-9
 (2898)
white prepupae new
 (3150)
white prepupae 12hr
 (2399)
white prepupae 24hr
 (1740)
pupae 2d postWPP
 (1558)
pupae 3d postWPP
 (1674)
pupae 4d postWPP
 (2085)
adult male 01day
 (2799)
adult male 05day
 (2271)
adult male 30day
 (1419)
adult female 01day
 (2559)
adult female 05day
 (2862)
adult female 30day
 (2623)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (4523)
embryo 02-04hr
 (5146)
embryo 04-06hr
 (1930)
embryo 06-08hr
 (2270)
embryo 08-10hr
 (2749)
embryo 10-12hr
 (2342)
embryo 12-14hr
 (2450)
embryo 14-16hr
 (2668)
embryo 16-18hr
 (2558)
embryo 18-20hr
 (2135)
embryo 20-22hr
 (2437)
embryo 22-24hr
 (2437)
larva L1
 
 1137
larva L2
 
 1062
larva L3 12hr old
 
 1009
larva L3 puffstage 1-2
 
 886
larva L3 puffstage 3-6
 (1986)
larva L3 puffstage 7-9
 (2898)
white prepupae new
 (3150)
white prepupae 12hr
 (2399)
white prepupae 24hr
 (1740)
pupae 2d postWPP
 (1558)
pupae 3d postWPP
 (1674)
pupae 4d postWPP
 (2085)
adult male 01day
 (2799)
adult male 05day
 (2271)
adult male 30day
 1419
adult female 01day
 (2559)
adult female 05day
 (2862)
adult female 30day
 (2623)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4523
embryo 02-04hr
 
 5146
embryo 04-06hr
 
 1930
embryo 06-08hr
 
 2270
embryo 08-10hr
 
 2749
embryo 10-12hr
 
 2342
embryo 12-14hr
 
 2450
embryo 14-16hr
 
 2668
embryo 16-18hr
 
 2558
embryo 18-20hr
 
 2135
embryo 20-22hr
 
 2437
embryo 22-24hr
 
 2437
larva L1
 
 1137
larva L2
 
 1062
larva L3 12hr old
 
 1009
larva L3 puffstage 1-2
 
 886
larva L3 puffstage 3-6
 
 1986
larva L3 puffstage 7-9
 
 2898
white prepupae new
 
 3150
white prepupae 12hr
 
 2399
white prepupae 24hr
 
 1740
pupae 2d postWPP
 
 1558
pupae 3d postWPP
 
 1674
pupae 4d postWPP
 
 2085
adult male 01day
 
 2799
adult male 05day
 
 2271
adult male 30day
 
 1419
adult female 01day
 
 2559
adult female 05day
 
 2862
adult female 30day
 
 2623
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4523
embryo 02-04hr
 
 5146
embryo 04-06hr
 
 1930
embryo 06-08hr
 
 2270
embryo 08-10hr
 
 2749
embryo 10-12hr
 
 2342
embryo 12-14hr
 
 2450
embryo 14-16hr
 
 2668
embryo 16-18hr
 
 2558
embryo 18-20hr
 
 2135
embryo 20-22hr
 
 2437
embryo 22-24hr
 
 2437
larva L1
 
 1137
larva L2
 
 1062
larva L3 12hr old
 
 1009
larva L3 puffstage 1-2
 
 886
larva L3 puffstage 3-6
 
 1986
larva L3 puffstage 7-9
 
 2898
white prepupae new
 
 3150
white prepupae 12hr
 
 2399
white prepupae 24hr
 
 1740
pupae 2d postWPP
 
 1558
pupae 3d postWPP
 
 1674
pupae 4d postWPP
 
 2085
adult male 01day
 
 2799
adult male 05day
 
 2271
adult male 30day
 
 1419
adult female 01day
 
 2559
adult female 05day
 
 2862
adult female 30day
 
 2623
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0017418 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 4523
embryo 02-04hr
 
 5146
embryo 04-06hr
 
 1930
embryo 06-08hr
 
 2270
embryo 08-10hr
 
 2749
embryo 10-12hr
 
 2342
embryo 12-14hr
 
 2450
embryo 14-16hr
 
 2668
embryo 16-18hr
 
 2558
embryo 18-20hr
 
 2135
embryo 20-22hr
 
 2437
embryo 22-24hr
 
 2437
larva L1
 
 1137
larva L2
 
 1062
larva L3 12hr old
 
 1009
larva L3 puffstage 1-2
 
 886
larva L3 puffstage 3-6
 
 1986
larva L3 puffstage 7-9
 
 2898
white prepupae new
 
 3150
white prepupae 12hr
 
 2399
white prepupae 24hr
 
 1740
pupae 2d postWPP
 
 1558
pupae 3d postWPP
 
 1674
pupae 4d postWPP
 
 2085
adult male 01day
 
 2799
adult male 05day
 
 2271
adult male 30day
 
 1419
adult female 01day
 
 2559
adult female 05day
 
 2862
adult female 30day
 
 2623
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (4523)
embryo 02-04hr
 (5146)
embryo 04-06hr
 (1930)
embryo 06-08hr
 (2270)
embryo 08-10hr
 (2749)
embryo 10-12hr
 (2342)
embryo 12-14hr
 (2450)
embryo 14-16hr
 (2668)
embryo 16-18hr
 (2558)
embryo 18-20hr
 (2135)
embryo 20-22hr
 (2437)
embryo 22-24hr
 (2437)
larva L1
 (1137)
larva L2
 (1062)
larva L3 12hr old
 (1009)
larva L3 puffstage 1-2
 (886)
larva L3 puffstage 3-6
 (1986)
larva L3 puffstage 7-9
 (2898)
white prepupae new
 (3150)
white prepupae 12hr
 (2399)
white prepupae 24hr
 (1740)
pupae 2d postWPP
 (1558)
pupae 3d postWPP
 (1674)
pupae 4d postWPP
 (2085)
adult male 01day
 (2799)
adult male 05day
 (2271)
adult male 30day
 (1419)
adult female 01day
 (2559)
adult female 05day
 (2862)
adult female 30day
 (2623)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (4523)
embryo 02-04hr
 (5146)
embryo 04-06hr
 1930
embryo 06-08hr
 2270
embryo 08-10hr
 (2749)
embryo 10-12hr
 2342
embryo 12-14hr
 2450
embryo 14-16hr
 (2668)
embryo 16-18hr
 (2558)
embryo 18-20hr
 2135
embryo 20-22hr
 2437
embryo 22-24hr
 2437
larva L1
 
 1137
larva L2
 
 1062
larva L3 12hr old
 
 1009
larva L3 puffstage 1-2
 
 886
larva L3 puffstage 3-6
 1986
larva L3 puffstage 7-9
 (2898)
white prepupae new
 (3150)
white prepupae 12hr
 2399
white prepupae 24hr
 1740
pupae 2d postWPP
 1558
pupae 3d postWPP
 1674
pupae 4d postWPP
 2085
adult male 01day
 (2799)
adult male 05day
 2271
adult male 30day
 1419
adult female 01day
 (2559)
adult female 05day
 (2862)
adult female 30day
 (2623)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4523
embryo 02-04hr
 
 5146
embryo 04-06hr
 
 1930
embryo 06-08hr
 
 2270
embryo 08-10hr
 
 2749
embryo 10-12hr
 
 2342
embryo 12-14hr
 
 2450
embryo 14-16hr
 
 2668
embryo 16-18hr
 
 2558
embryo 18-20hr
 
 2135
embryo 20-22hr
 
 2437
embryo 22-24hr
 
 2437
larva L1
 
 1137
larva L2
 
 1062
larva L3 12hr old
 
 1009
larva L3 puffstage 1-2
 
 886
larva L3 puffstage 3-6
 
 1986
larva L3 puffstage 7-9
 
 2898
white prepupae new
 
 3150
white prepupae 12hr
 
 2399
white prepupae 24hr
 
 1740
pupae 2d postWPP
 
 1558
pupae 3d postWPP
 
 1674
pupae 4d postWPP
 
 2085
adult male 01day
 
 2799
adult male 05day
 
 2271
adult male 30day
 
 1419
adult female 01day
 
 2559
adult female 05day
 
 2862
adult female 30day
 
 2623
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4523
embryo 02-04hr
 
 5146
embryo 04-06hr
 
 1930
embryo 06-08hr
 
 2270
embryo 08-10hr
 
 2749
embryo 10-12hr
 
 2342
embryo 12-14hr
 
 2450
embryo 14-16hr
 
 2668
embryo 16-18hr
 
 2558
embryo 18-20hr
 
 2135
embryo 20-22hr
 
 2437
embryo 22-24hr
 
 2437
larva L1
 
 1137
larva L2
 
 1062
larva L3 12hr old
 
 1009
larva L3 puffstage 1-2
 
 886
larva L3 puffstage 3-6
 
 1986
larva L3 puffstage 7-9
 
 2898
white prepupae new
 
 3150
white prepupae 12hr
 
 2399
white prepupae 24hr
 
 1740
pupae 2d postWPP
 
 1558
pupae 3d postWPP
 
 1674
pupae 4d postWPP
 
 2085
adult male 01day
 
 2799
adult male 05day
 
 2271
adult male 30day
 
 1419
adult female 01day
 
 2559
adult female 05day
 
 2862
adult female 30day
 
 2623
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0017418


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0017418
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult brain, larval hindgut, adult ovary.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0017418 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 66.4
Larval Midgut
 
 88.2
Larval Hindgut
 
 106.4
Larval Malpighian Tubules
 
 90.4
Larval Fat Body
 
 99.5
Larval Salivary Gland
 
 36.7
Larval Trachea
 
 57.35
Larval Carcass
 
 79.45
Adult Head
 
 72.1
Adult Eye
 
 41.725
Adult Brain
 
 188.6
Adult Thoracic-Abdominal Ganglion
 
 69.6
Adult Crop
 
 74.7
Adult Midgut
 
 60.3
Adult Hindgut
 
 77.3
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 75.3
Adult Salivary Gland
 
 38.5
Adult Heart
 
 63.525
Adult VirginFemale Spermatheca
 
 41.9
Adult InseminatedFemale Spermatheca
 
 34.9
Adult Ovary
 
 314.7
Adult Testis
 
 57
Adult Male Accessory Gland
 
 33.5
Adult Carcass
 
 75.6
Expression Level Scale
 None 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 66.4
Larval Midgut
 
 88.2
Larval Hindgut
 
 106.4
Larval Malpighian Tubules
 
 90.4
Larval Fat Body
 
 99.5
Larval Salivary Gland
 
 36.7
Larval Trachea
 
 57.35
Larval Carcass
 
 79.45
Adult Head
 
 72.1
Adult Eye
 
 41.725
Adult Brain
 
 188.6
Adult Thoracic-Abdominal Ganglion
 
 69.6
Adult Crop
 
 74.7
Adult Midgut
 
 60.3
Adult Hindgut
 
 77.3
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 75.3
Adult Salivary Gland
 
 38.5
Adult Heart
 
 63.525
Adult VirginFemale Spermatheca
 
 41.9
Adult InseminatedFemale Spermatheca
 
 34.9
Adult Ovary
 
 314.7
Adult Testis
 
 57
Adult Male Accessory Gland
 
 33.5
Adult Carcass
 
 75.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 66.4
Larval Midgut
 
 88.2
Larval Hindgut
 
 106.4
Larval Malpighian Tubules
 
 90.4
Larval Fat Body
 
 99.5
Larval Salivary Gland
 
 36.7
Larval Trachea
 
 57.35
Larval Carcass
 
 79.45
Adult Head
 
 72.1
Adult Eye
 
 41.725
Adult Brain
 
 188.6
Adult Thoracic-Abdominal Ganglion
 
 69.6
Adult Crop
 
 74.7
Adult Midgut
 
 60.3
Adult Hindgut
 
 77.3
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 75.3
Adult Salivary Gland
 
 38.5
Adult Heart
 
 63.525
Adult VirginFemale Spermatheca
 
 41.9
Adult InseminatedFemale Spermatheca
 
 34.9
Adult Ovary
 
 314.7
Adult Testis
 
 57
Adult Male Accessory Gland
 
 33.5
Adult Carcass
 
 75.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 66.4
Larval Midgut
 
 88.2
Larval Hindgut
 
 106.4
Larval Malpighian Tubules
 
 90.4
Larval Fat Body
 
 99.5
Larval Salivary Gland
 
 36.7
Larval Trachea
 
 57.35
Larval Carcass
 
 79.45
Adult Head
 
 72.1
Adult Eye
 
 41.725
Adult Brain
 
 188.6
Adult Thoracic-Abdominal Ganglion
 
 69.6
Adult Crop
 
 74.7
Adult Midgut
 
 60.3
Adult Hindgut
 
 77.3
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 75.3
Adult Salivary Gland
 
 38.5
Adult Heart
 
 63.525
Adult VirginFemale Spermatheca
 
 41.9
Adult InseminatedFemale Spermatheca
 
 34.9
Adult Ovary
 
 314.7
Adult Testis
 
 57
Adult Male Accessory Gland
 
 33.5
Adult Carcass
 
 75.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0017418 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 66.4
Larval Midgut
 
 88.2
Larval Hindgut
 
 106.4
Larval Malpighian Tubules
 
 90.4
Larval Fat Body
 
 99.5
Larval Salivary Gland
 
 36.7
Larval Trachea
 
 57.35
Larval Carcass
 
 79.45
Adult Head
 
 72.1
Adult Eye
 
 41.725
Adult Brain
 
 188.6
Adult Thoracic-Abdominal Ganglion
 
 69.6
Adult Crop
 
 74.7
Adult Midgut
 
 60.3
Adult Hindgut
 
 77.3
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 75.3
Adult Salivary Gland
 
 38.5
Adult Heart
 
 63.525
Adult VirginFemale Spermatheca
 
 41.9
Adult InseminatedFemale Spermatheca
 
 34.9
Adult Ovary
 
 314.7
Adult Testis
 
 57
Adult Male Accessory Gland
 
 33.5
Adult Carcass
 
 75.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 66.4
Larval Midgut
 
 88.2
Larval Hindgut
 
 106.4
Larval Malpighian Tubules
 
 90.4
Larval Fat Body
 
 99.5
Larval Salivary Gland
 
 36.7
Larval Trachea
 
 57.35
Larval Carcass
 
 79.45
Adult Head
 
 72.1
Adult Eye
 
 41.725
Adult Brain
 
 188.6
Adult Thoracic-Abdominal Ganglion
 
 69.6
Adult Crop
 
 74.7
Adult Midgut
 
 60.3
Adult Hindgut
 
 77.3
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 75.3
Adult Salivary Gland
 
 38.5
Adult Heart
 
 63.525
Adult VirginFemale Spermatheca
 
 41.9
Adult InseminatedFemale Spermatheca
 
 34.9
Adult Ovary
 
 314.7
Adult Testis
 
 57
Adult Male Accessory Gland
 
 33.5
Adult Carcass
 
 75.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 66.4
Larval Midgut
 
 88.2
Larval Hindgut
 
 106.4
Larval Malpighian Tubules
 
 90.4
Larval Fat Body
 
 99.5
Larval Salivary Gland
 
 36.7
Larval Trachea
 
 57.35
Larval Carcass
 
 79.45
Adult Head
 
 72.1
Adult Eye
 
 41.725
Adult Brain
 
 188.6
Adult Thoracic-Abdominal Ganglion
 
 69.6
Adult Crop
 
 74.7
Adult Midgut
 
 60.3
Adult Hindgut
 
 77.3
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 75.3
Adult Salivary Gland
 
 38.5
Adult Heart
 
 63.525
Adult VirginFemale Spermatheca
 
 41.9
Adult InseminatedFemale Spermatheca
 
 34.9
Adult Ovary
 
 314.7
Adult Testis
 
 57
Adult Male Accessory Gland
 
 33.5
Adult Carcass
 
 75.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 66.4
Larval Midgut
 
 88.2
Larval Hindgut
 
 106.4
Larval Malpighian Tubules
 
 90.4
Larval Fat Body
 
 99.5
Larval Salivary Gland
 
 36.7
Larval Trachea
 
 57.35
Larval Carcass
 
 79.45
Adult Head
 
 72.1
Adult Eye
 
 41.725
Adult Brain
 
 188.6
Adult Thoracic-Abdominal Ganglion
 
 69.6
Adult Crop
 
 74.7
Adult Midgut
 
 60.3
Adult Hindgut
 
 77.3
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 75.3
Adult Salivary Gland
 
 38.5
Adult Heart
 
 63.525
Adult VirginFemale Spermatheca
 
 41.9
Adult InseminatedFemale Spermatheca
 
 34.9
Adult Ovary
 
 314.7
Adult Testis
 
 57
Adult Male Accessory Gland
 
 33.5
Adult Carcass
 
 75.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules no informative data
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 72.1
 
NA 
Eye
 
 41.725
 
NA 
Brain
 
 188.6
 
66.4 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 69.6
 
NA 
Crop
 
 74.7
 
88.2 
Midgut
 
 60.3
 
106.4 
Hindgut
 
 77.3
 
90.4 
Malpighian Tubules
 
 no informative data
 
99.5 
Fat Body
 
 75.3
 
36.7 
Salivary Gland
 
 38.5
 
NA 
Heart
 
 63.525
 
57.35 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 41.9
 
NA 
InseminatedFemale Spermatheca
 
 34.9
 
NA 
Ovary
 
 314.7
 
NA 
Testis
 
 57
 
NA 
Male Accessory Gland
 
 33.5
 
79.45 
Carcass
 
 75.6

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
photoreceptor cell R1 & rough endoplasmic reticulum | somatic clone
photoreceptor cell R2 & rough endoplasmic reticulum | somatic clone
photoreceptor cell R3 & rough endoplasmic reticulum | somatic clone
photoreceptor cell R4 & rough endoplasmic reticulum | somatic clone
photoreceptor cell R5 & rough endoplasmic reticulum | somatic clone
photoreceptor cell R6 & rough endoplasmic reticulum | somatic clone
photoreceptor cell R7 & rough endoplasmic reticulum | somatic clone
hide Classical Alleles ( 12 )
For All Classical Alleles Show

Allele of ari-1ClassMutagenStocksKnown lesion
ari-1e038881 --
ari-1EP3171 --
ari-1EY019601 --
ari-1EY089091 --
ari-1NP1063
1 --
ari-1UM-8334-3
1 --
ari-111990 Yes
ari-13747
0 Yes
ari-14822
0 Yes
ari-15777
0 Yes
ari-1e038890 --
ari-1unspecified
0 --
hide Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show

Allele of ari-1ClassMutagenStocksKnown lesion
ari-1GD117252 Yes
ari-1JF033521 Yes
hide Aneuploid Aberrations
Duplicated in
Not duplicated in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
UAS construct
Insertions
Type of insertions
Name
Expression data
insertion of mobile activating element
insertion of enhancer trap binary system
hide Gene Ontology: Function, Process & Cellular Component ( 4 unique terms )
hide Terms Based on Experimental Evidence ( 0 terms )
hide Terms Based on Predictions or Assertions ( 4 terms )
Molecular Function
CV term
References
inferred from electronic annotation with InterPro:IPR015893
Biological Process ( 0 terms)
Cellular Component
CV term
References
non-traceable author statement
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
ari-1 allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 9 )
Bloomington
Harvard
Kyoto
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 156 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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hide Etymology
The name "ariadne" refers to the loss of clues to find the correct path of axonal projection, and it evokes the Greek myth of the thread that Ariadne gave to Theseus to find his way in the Minotaur's labyrinth.
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for identity of: ari CG5659
Source for database merge of
Source for merge of: ari l(1)16Fj
Additional comments
hide Other Comments
ari-1 is required for the correct differentiation of most cell types in the adult organism.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 9 )
Reported As
Symbol Synonym
l(1)16Fj
 
Name Synonym
Secondary FlyBase IDs
  • FBgn0014203
hide References ( 37 )
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List References by type
hide Recent research papers ( 2 )
Gradilla et al., 2011, Genetics 189(3): 871--883
Isoform-Specific Regulation of a Steroid Hormone Nuclear Receptor by an E3 Ubiquitin Ligase in Drosophila melanogaster. [FBrf0216551]
Ying et al., 2011, PLoS ONE 6(9): e23863
Comprehensively Surveying Structure and Function of RING Domains from Drosophila melanogaster. [FBrf0215242]
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All reviews listed in FlyBase were published before 2010