Please see the JBrowse view of Dmel\Orct for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
Possible gene duplication of CG13610
Gene model reviewed during 5.47
548, 370 (aa)
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Orct using the Feature Mapper tool.
Orct transcripts are detected in embryos, third instar larvae, and adults on northern blots with the highest levels in larvae. Other stages were not tested.
GBrowse - Visual display of RNA-Seq signals
View Dmel\Orct in GBrowse 23-84
3-84
3-83.0
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
Source for identity of: Orct CG6331
In FBrf0099562, the Orct locus is stated to be adjacent to the P{PZ}lmg03424 insertion, which is at 29D. However, the protein sequence of Orct (Q9VCA2) corresponds to the annotation CG6331, which maps to 95F. The confusion arose because the Y12399 sequence accession is chimeric, containing sequences from two separate genomic regions; part of the Y12399 sequence corresponds to CG6331 (i.e. Orct) at 95F, while the other part maps to an intron of CG17834 (which is adjacent to lmg) at 29D.
FlyBase curator comment: in FBrf0125046, the Orct locus is stated to span Acer and lmg which are at 29D. However, this is now known to be an error, with Orct corresponding to annotation CG6331 at 95F. The confusion arose because the Orct accession Y12399 is chimeric (see Shirras, 2005.5.31, personal communication to FlyBase).
FlyBase curator comment: in FBrf0099562, the Orct locus is stated to be adjacent to the P{PZ}lmg03424 insertion, which is at 29D. However, this is now known to be an error, with Orct corresponding to annotation CG6331 at 95F. The confusion arose because the Orct accession Y12399 is chimeric (see Shirras, 2005.5.31, personal communication to FlyBase).