A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\Dredd

General Information
SymbolDmel\DreddSpeciesD. melanogaster
NameDeath related ced-3/Nedd2-like proteinAnnotation symbolCG7486
Feature typeprotein_coding_geneFlyBase IDFBgn0020381
Gene Model StatusCurrent Stock availability 5 publicly available
Also Known AsDcp-2/Dredd, Dcp-2, EG:115C2.9, Dcp2
Genomic Location
Chromosome (arm)XRecombination map1-
Cytogenetic map1B12-1B13Sequence locationX:527,553..529,760 [-]

Genomic Maps

GBrowse View Help
modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene Death related ced-3/Nedd2-like protein is referred to in FlyBase by the symbol Dmel\Dredd (CG7486, FBgn0020381). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: protein binding; apoptotic protease activator activity; endopeptidase activity. There is experimental evidence that it is involved in the biological process: immune response; apoptotic process; peripheral nervous system neuron development; sperm individualization; protein processing; defense response to Gram-negative bacterium; peptidoglycan recognition protein signaling pathway; defense response. 31 alleles are reported. The phenotypes of these alleles are annotated with: spermatid; mesothoracic tergum. It has 3 annotated transcripts and 3 annotated polypeptides. Protein features are: Peptidase C14, ICE, catalytic subunit p20; Peptidase C14, caspase catalytic; Peptidase C14, caspase non-catalytic subunit p10; Peptidase C14, caspase precursor p45; Peptidase C14, caspase precursor p45, core. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed during late larval stages, at stages throughout the pupal period. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, larval central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult spermathecae, adult male accessory gland, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1639071_a_at completely aligns to an exonic region common to each of the 3 FlyBase-annotated transcript isoforms of Dredd. Gene sequence location is X:527553..529760.

External Summaries
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
References
Controlled Vocabulary Terms
FB2012_01
References
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
1B12-1B13  
Limits computationally determined from genome sequence between P{EP}svrEP356&P{EP}argEP452 and P{EP}DreddEP1412&P{EP}Suv4-20EP1216a  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
1B10-1B10  
1B13-1B13  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\Dredd for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0070119 FBtr0114561 FBtr0114559 FBtr0114560 FBtr0070120 FBpp0070114 FBpp0113053 FBpp0113051 FBpp0113052 FBti0039533 FBti0007434 FBti0024533 FBti0014706 FBti0014708 FBti0014702 FBti0014709 FBti0058824 FBti0014713 FBti0014705 FBti0014700 FBti0014701 FBti0014710 FBti0014715 FBti0014699 FBti0072030 FBti0014707 FBti0014712 FBti0014704 FBti0014703
Comments on Gene Model
DGC clone GH10971 appears problematic: unspliced intron
Atypical cDNA supported: retained intron (FBrf0104738).
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0114559
  1897
  488
FBtr0114560
  1915
  494
FBtr0114561
  1973
  284
Additional Transcript Data & Comments
Reported size (kB)
1.708, 1.694 (longest cDNA)
1.7, 1.5 (northern blot)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0113051  
55.5  
488  
6.95  
FBpp0113052  
56.2  
494  
6.95  
FBpp0113053  
32.2  
284  
7.00  
Additional Polypeptide Data & Comments
Reported size (kDa)
494, 488 (aa)
Comments
When apoptosis is triggered by the expression of rpr, grim, or W proteins, caspase-like processing of the the α, γ, and δ isoforms of Dredd protein occurs. (It is likely that the putative α isoform is a truncated form of the δ isoform.)
Dredd protein has two death effector domains, and a caspase-like domain.
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
MEROPS - An information resource for peptidases and the proteins that inhibit them
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
No Assay Recorded
Stage
Tissue/Position (including subcellular localization)
Reference
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view l(1)1Bi-RA Dredd-RF Dredd-RD Dredd-RE su(s)-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0020381


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0020381
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed during late larval stages, at stages throughout the pupal period.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0020381 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 586
embryo 02-04hr
 
 414
embryo 04-06hr
 
 296
embryo 06-08hr
 
 595
embryo 08-10hr
 
 764
embryo 10-12hr
 
 1010
embryo 12-14hr
 
 949
embryo 14-16hr
 
 1024
embryo 16-18hr
 
 784
embryo 18-20hr
 
 716
embryo 20-22hr
 
 828
embryo 22-24hr
 
 849
larva L1
 
 1329
larva L2
 
 1121
larva L3 12hr old
 
 909
larva L3 puffstage 1-2
 
 1309
larva L3 puffstage 3-6
 
 1498
larva L3 puffstage 7-9
 
 1880
white prepupae new
 
 1620
white prepupae 12hr
 
 1485
white prepupae 24hr
 
 1878
pupae 2d postWPP
 
 1652
pupae 3d postWPP
 
 970
pupae 4d postWPP
 
 797
adult male 01day
 
 867
adult male 05day
 
 1036
adult male 30day
 
 1256
adult female 01day
 
 1059
adult female 05day
 
 999
adult female 30day
 
 1089
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (586)
embryo 02-04hr
 (414)
embryo 04-06hr
 (296)
embryo 06-08hr
 (595)
embryo 08-10hr
 (764)
embryo 10-12hr
 (1010)
embryo 12-14hr
 (949)
embryo 14-16hr
 (1024)
embryo 16-18hr
 (784)
embryo 18-20hr
 (716)
embryo 20-22hr
 (828)
embryo 22-24hr
 (849)
larva L1
 (1329)
larva L2
 (1121)
larva L3 12hr old
 (909)
larva L3 puffstage 1-2
 (1309)
larva L3 puffstage 3-6
 (1498)
larva L3 puffstage 7-9
 (1880)
white prepupae new
 (1620)
white prepupae 12hr
 (1485)
white prepupae 24hr
 (1878)
pupae 2d postWPP
 (1652)
pupae 3d postWPP
 (970)
pupae 4d postWPP
 (797)
adult male 01day
 (867)
adult male 05day
 (1036)
adult male 30day
 (1256)
adult female 01day
 (1059)
adult female 05day
 (999)
adult female 30day
 (1089)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 586
embryo 02-04hr
 
 414
embryo 04-06hr
 
 296
embryo 06-08hr
 
 595
embryo 08-10hr
 
 764
embryo 10-12hr
 
 1010
embryo 12-14hr
 
 949
embryo 14-16hr
 
 1024
embryo 16-18hr
 
 784
embryo 18-20hr
 
 716
embryo 20-22hr
 
 828
embryo 22-24hr
 
 849
larva L1
 
 1329
larva L2
 
 1121
larva L3 12hr old
 
 909
larva L3 puffstage 1-2
 
 1309
larva L3 puffstage 3-6
 1498
larva L3 puffstage 7-9
 (1880)
white prepupae new
 (1620)
white prepupae 12hr
 1485
white prepupae 24hr
 (1878)
pupae 2d postWPP
 (1652)
pupae 3d postWPP
 
 970
pupae 4d postWPP
 
 797
adult male 01day
 
 867
adult male 05day
 
 1036
adult male 30day
 
 1256
adult female 01day
 
 1059
adult female 05day
 
 999
adult female 30day
 
 1089
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 586
embryo 02-04hr
 
 414
embryo 04-06hr
 
 296
embryo 06-08hr
 
 595
embryo 08-10hr
 
 764
embryo 10-12hr
 
 1010
embryo 12-14hr
 
 949
embryo 14-16hr
 
 1024
embryo 16-18hr
 
 784
embryo 18-20hr
 
 716
embryo 20-22hr
 
 828
embryo 22-24hr
 
 849
larva L1
 
 1329
larva L2
 
 1121
larva L3 12hr old
 
 909
larva L3 puffstage 1-2
 
 1309
larva L3 puffstage 3-6
 
 1498
larva L3 puffstage 7-9
 
 1880
white prepupae new
 
 1620
white prepupae 12hr
 
 1485
white prepupae 24hr
 
 1878
pupae 2d postWPP
 
 1652
pupae 3d postWPP
 
 970
pupae 4d postWPP
 
 797
adult male 01day
 
 867
adult male 05day
 
 1036
adult male 30day
 
 1256
adult female 01day
 
 1059
adult female 05day
 
 999
adult female 30day
 
 1089
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 586
embryo 02-04hr
 
 414
embryo 04-06hr
 
 296
embryo 06-08hr
 
 595
embryo 08-10hr
 
 764
embryo 10-12hr
 
 1010
embryo 12-14hr
 
 949
embryo 14-16hr
 
 1024
embryo 16-18hr
 
 784
embryo 18-20hr
 
 716
embryo 20-22hr
 
 828
embryo 22-24hr
 
 849
larva L1
 
 1329
larva L2
 
 1121
larva L3 12hr old
 
 909
larva L3 puffstage 1-2
 
 1309
larva L3 puffstage 3-6
 
 1498
larva L3 puffstage 7-9
 
 1880
white prepupae new
 
 1620
white prepupae 12hr
 
 1485
white prepupae 24hr
 
 1878
pupae 2d postWPP
 
 1652
pupae 3d postWPP
 
 970
pupae 4d postWPP
 
 797
adult male 01day
 
 867
adult male 05day
 
 1036
adult male 30day
 
 1256
adult female 01day
 
 1059
adult female 05day
 
 999
adult female 30day
 
 1089
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0020381 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 586
embryo 02-04hr
 
 414
embryo 04-06hr
 
 296
embryo 06-08hr
 
 595
embryo 08-10hr
 
 764
embryo 10-12hr
 
 1010
embryo 12-14hr
 
 949
embryo 14-16hr
 
 1024
embryo 16-18hr
 
 784
embryo 18-20hr
 
 716
embryo 20-22hr
 
 828
embryo 22-24hr
 
 849
larva L1
 
 1329
larva L2
 
 1121
larva L3 12hr old
 
 909
larva L3 puffstage 1-2
 
 1309
larva L3 puffstage 3-6
 
 1498
larva L3 puffstage 7-9
 
 1880
white prepupae new
 
 1620
white prepupae 12hr
 
 1485
white prepupae 24hr
 
 1878
pupae 2d postWPP
 
 1652
pupae 3d postWPP
 
 970
pupae 4d postWPP
 
 797
adult male 01day
 
 867
adult male 05day
 
 1036
adult male 30day
 
 1256
adult female 01day
 
 1059
adult female 05day
 
 999
adult female 30day
 
 1089
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (586)
embryo 02-04hr
 (414)
embryo 04-06hr
 (296)
embryo 06-08hr
 (595)
embryo 08-10hr
 (764)
embryo 10-12hr
 (1010)
embryo 12-14hr
 (949)
embryo 14-16hr
 (1024)
embryo 16-18hr
 (784)
embryo 18-20hr
 (716)
embryo 20-22hr
 (828)
embryo 22-24hr
 (849)
larva L1
 (1329)
larva L2
 (1121)
larva L3 12hr old
 (909)
larva L3 puffstage 1-2
 (1309)
larva L3 puffstage 3-6
 (1498)
larva L3 puffstage 7-9
 (1880)
white prepupae new
 (1620)
white prepupae 12hr
 (1485)
white prepupae 24hr
 (1878)
pupae 2d postWPP
 (1652)
pupae 3d postWPP
 (970)
pupae 4d postWPP
 (797)
adult male 01day
 (867)
adult male 05day
 (1036)
adult male 30day
 (1256)
adult female 01day
 (1059)
adult female 05day
 (999)
adult female 30day
 (1089)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 586
embryo 02-04hr
 
 414
embryo 04-06hr
 
 296
embryo 06-08hr
 
 595
embryo 08-10hr
 
 764
embryo 10-12hr
 
 1010
embryo 12-14hr
 
 949
embryo 14-16hr
 
 1024
embryo 16-18hr
 
 784
embryo 18-20hr
 
 716
embryo 20-22hr
 
 828
embryo 22-24hr
 
 849
larva L1
 
 1329
larva L2
 
 1121
larva L3 12hr old
 
 909
larva L3 puffstage 1-2
 
 1309
larva L3 puffstage 3-6
 1498
larva L3 puffstage 7-9
 1880
white prepupae new
 1620
white prepupae 12hr
 1485
white prepupae 24hr
 1878
pupae 2d postWPP
 1652
pupae 3d postWPP
 
 970
pupae 4d postWPP
 
 797
adult male 01day
 
 867
adult male 05day
 
 1036
adult male 30day
 
 1256
adult female 01day
 
 1059
adult female 05day
 
 999
adult female 30day
 
 1089
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 586
embryo 02-04hr
 
 414
embryo 04-06hr
 
 296
embryo 06-08hr
 
 595
embryo 08-10hr
 
 764
embryo 10-12hr
 
 1010
embryo 12-14hr
 
 949
embryo 14-16hr
 
 1024
embryo 16-18hr
 
 784
embryo 18-20hr
 
 716
embryo 20-22hr
 
 828
embryo 22-24hr
 
 849
larva L1
 
 1329
larva L2
 
 1121
larva L3 12hr old
 
 909
larva L3 puffstage 1-2
 
 1309
larva L3 puffstage 3-6
 
 1498
larva L3 puffstage 7-9
 
 1880
white prepupae new
 
 1620
white prepupae 12hr
 
 1485
white prepupae 24hr
 
 1878
pupae 2d postWPP
 
 1652
pupae 3d postWPP
 
 970
pupae 4d postWPP
 
 797
adult male 01day
 
 867
adult male 05day
 
 1036
adult male 30day
 
 1256
adult female 01day
 
 1059
adult female 05day
 
 999
adult female 30day
 
 1089
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 586
embryo 02-04hr
 
 414
embryo 04-06hr
 
 296
embryo 06-08hr
 
 595
embryo 08-10hr
 
 764
embryo 10-12hr
 
 1010
embryo 12-14hr
 
 949
embryo 14-16hr
 
 1024
embryo 16-18hr
 
 784
embryo 18-20hr
 
 716
embryo 20-22hr
 
 828
embryo 22-24hr
 
 849
larva L1
 
 1329
larva L2
 
 1121
larva L3 12hr old
 
 909
larva L3 puffstage 1-2
 
 1309
larva L3 puffstage 3-6
 
 1498
larva L3 puffstage 7-9
 
 1880
white prepupae new
 
 1620
white prepupae 12hr
 
 1485
white prepupae 24hr
 
 1878
pupae 2d postWPP
 
 1652
pupae 3d postWPP
 
 970
pupae 4d postWPP
 
 797
adult male 01day
 
 867
adult male 05day
 
 1036
adult male 30day
 
 1256
adult female 01day
 
 1059
adult female 05day
 
 999
adult female 30day
 
 1089
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0020381


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0020381
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, larval central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult spermathecae, adult male accessory gland, larval/adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0020381 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 111.25
Larval Midgut
 
 117.4
Larval Hindgut
 
 180.1
Larval Malpighian Tubules
 
 189.2
Larval Fat Body
 
 191.8
Larval Salivary Gland
 
 297.3
Larval Trachea
 
 219.5
Larval Carcass
 
 120.375
Adult Head
 
 92.7
Adult Eye
 
 109.3
Adult Brain
 
 63.5
Adult Thoracic-Abdominal Ganglion
 
 82.5
Adult Crop
 
 202.7
Adult Midgut
 
 170.7
Adult Hindgut
 
 217.9
Adult Malpighian Tubules
 
 170.2
Adult Fat Body
 
 164.8
Adult Salivary Gland
 
 235
Adult Heart
 
 152.3
Adult VirginFemale Spermatheca
 
 210.8
Adult InseminatedFemale Spermatheca
 
 238.2
Adult Ovary
 
 91
Adult Testis
 
 54
Adult Male Accessory Gland
 
 251.8
Adult Carcass
 
 140.8
Expression Level Scale
 None 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 111.25
Larval Midgut
 
 117.4
Larval Hindgut
 
 180.1
Larval Malpighian Tubules
 
 189.2
Larval Fat Body
 
 191.8
Larval Salivary Gland
 
 297.3
Larval Trachea
 
 219.5
Larval Carcass
 
 120.375
Adult Head
 
 92.7
Adult Eye
 
 109.3
Adult Brain
 
 63.5
Adult Thoracic-Abdominal Ganglion
 
 82.5
Adult Crop
 
 202.7
Adult Midgut
 
 170.7
Adult Hindgut
 
 217.9
Adult Malpighian Tubules
 
 170.2
Adult Fat Body
 
 164.8
Adult Salivary Gland
 
 235
Adult Heart
 
 152.3
Adult VirginFemale Spermatheca
 
 210.8
Adult InseminatedFemale Spermatheca
 
 238.2
Adult Ovary
 
 91
Adult Testis
 
 54
Adult Male Accessory Gland
 
 251.8
Adult Carcass
 
 140.8
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 111.25
Larval Midgut
 
 117.4
Larval Hindgut
 
 180.1
Larval Malpighian Tubules
 
 189.2
Larval Fat Body
 
 191.8
Larval Salivary Gland
 
 297.3
Larval Trachea
 
 219.5
Larval Carcass
 
 120.375
Adult Head
 
 92.7
Adult Eye
 
 109.3
Adult Brain
 
 63.5
Adult Thoracic-Abdominal Ganglion
 
 82.5
Adult Crop
 
 202.7
Adult Midgut
 
 170.7
Adult Hindgut
 
 217.9
Adult Malpighian Tubules
 
 170.2
Adult Fat Body
 
 164.8
Adult Salivary Gland
 
 235
Adult Heart
 
 152.3
Adult VirginFemale Spermatheca
 
 210.8
Adult InseminatedFemale Spermatheca
 
 238.2
Adult Ovary
 
 91
Adult Testis
 
 54
Adult Male Accessory Gland
 
 251.8
Adult Carcass
 
 140.8
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 111.25
Larval Midgut
 
 117.4
Larval Hindgut
 
 180.1
Larval Malpighian Tubules
 
 189.2
Larval Fat Body
 
 191.8
Larval Salivary Gland
 
 297.3
Larval Trachea
 
 219.5
Larval Carcass
 
 120.375
Adult Head
 
 92.7
Adult Eye
 
 109.3
Adult Brain
 
 63.5
Adult Thoracic-Abdominal Ganglion
 
 82.5
Adult Crop
 
 202.7
Adult Midgut
 
 170.7
Adult Hindgut
 
 217.9
Adult Malpighian Tubules
 
 170.2
Adult Fat Body
 
 164.8
Adult Salivary Gland
 
 235
Adult Heart
 
 152.3
Adult VirginFemale Spermatheca
 
 210.8
Adult InseminatedFemale Spermatheca
 
 238.2
Adult Ovary
 
 91
Adult Testis
 
 54
Adult Male Accessory Gland
 
 251.8
Adult Carcass
 
 140.8
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0020381 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 111.25
Larval Midgut
 
 117.4
Larval Hindgut
 
 180.1
Larval Malpighian Tubules
 
 189.2
Larval Fat Body
 
 191.8
Larval Salivary Gland
 
 297.3
Larval Trachea
 
 219.5
Larval Carcass
 
 120.375
Adult Head
 
 92.7
Adult Eye
 
 109.3
Adult Brain
 
 63.5
Adult Thoracic-Abdominal Ganglion
 
 82.5
Adult Crop
 
 202.7
Adult Midgut
 
 170.7
Adult Hindgut
 
 217.9
Adult Malpighian Tubules
 
 170.2
Adult Fat Body
 
 164.8
Adult Salivary Gland
 
 235
Adult Heart
 
 152.3
Adult VirginFemale Spermatheca
 
 210.8
Adult InseminatedFemale Spermatheca
 
 238.2
Adult Ovary
 
 91
Adult Testis
 
 54
Adult Male Accessory Gland
 
 251.8
Adult Carcass
 
 140.8
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 111.25
Larval Midgut
 
 117.4
Larval Hindgut
 
 180.1
Larval Malpighian Tubules
 
 189.2
Larval Fat Body
 
 191.8
Larval Salivary Gland
 
 297.3
Larval Trachea
 
 219.5
Larval Carcass
 
 120.375
Adult Head
 
 92.7
Adult Eye
 
 109.3
Adult Brain
 
 63.5
Adult Thoracic-Abdominal Ganglion
 
 82.5
Adult Crop
 
 202.7
Adult Midgut
 
 170.7
Adult Hindgut
 
 217.9
Adult Malpighian Tubules
 
 170.2
Adult Fat Body
 
 164.8
Adult Salivary Gland
 
 235
Adult Heart
 
 152.3
Adult VirginFemale Spermatheca
 
 210.8
Adult InseminatedFemale Spermatheca
 
 238.2
Adult Ovary
 
 91
Adult Testis
 
 54
Adult Male Accessory Gland
 
 251.8
Adult Carcass
 
 140.8
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 111.25
Larval Midgut
 
 117.4
Larval Hindgut
 
 180.1
Larval Malpighian Tubules
 
 189.2
Larval Fat Body
 
 191.8
Larval Salivary Gland
 
 297.3
Larval Trachea
 
 219.5
Larval Carcass
 
 120.375
Adult Head
 
 92.7
Adult Eye
 
 109.3
Adult Brain
 
 63.5
Adult Thoracic-Abdominal Ganglion
 
 82.5
Adult Crop
 
 202.7
Adult Midgut
 
 170.7
Adult Hindgut
 
 217.9
Adult Malpighian Tubules
 
 170.2
Adult Fat Body
 
 164.8
Adult Salivary Gland
 
 235
Adult Heart
 
 152.3
Adult VirginFemale Spermatheca
 
 210.8
Adult InseminatedFemale Spermatheca
 
 238.2
Adult Ovary
 
 91
Adult Testis
 
 54
Adult Male Accessory Gland
 
 251.8
Adult Carcass
 
 140.8
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 111.25
Larval Midgut
 
 117.4
Larval Hindgut
 
 180.1
Larval Malpighian Tubules
 
 189.2
Larval Fat Body
 
 191.8
Larval Salivary Gland
 
 297.3
Larval Trachea
 
 219.5
Larval Carcass
 
 120.375
Adult Head
 
 92.7
Adult Eye
 
 109.3
Adult Brain
 
 63.5
Adult Thoracic-Abdominal Ganglion
 
 82.5
Adult Crop
 
 202.7
Adult Midgut
 
 170.7
Adult Hindgut
 
 217.9
Adult Malpighian Tubules
 
 170.2
Adult Fat Body
 
 164.8
Adult Salivary Gland
 
 235
Adult Heart
 
 152.3
Adult VirginFemale Spermatheca
 
 210.8
Adult InseminatedFemale Spermatheca
 
 238.2
Adult Ovary
 
 91
Adult Testis
 
 54
Adult Male Accessory Gland
 
 251.8
Adult Carcass
 
 140.8
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 92.7
 
NA 
Eye
 
 109.3
 
NA 
Brain
 
 63.5
 
111.25 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 82.5
 
NA 
Crop
 
 202.7
 
117.4 
Midgut
 
 170.7
 
180.1 
Hindgut
 
 217.9
 
189.2 
Malpighian Tubules
 
 170.2
 
191.8 
Fat Body
 
 164.8
 
297.3 
Salivary Gland
 
 235
 
NA 
Heart
 
 152.3
 
219.5 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 210.8
 
NA 
InseminatedFemale Spermatheca
 
 238.2
 
NA 
Ovary
 
 91
 
NA 
Testis
 
 54
 
NA 
Male Accessory Gland
 
 251.8
 
120.375 
Carcass
 
 140.8

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 9 )
For All Classical Alleles Show

Allele of DreddClassMutagenStocksKnown lesion
DreddEP1412hypomorphic allele - genetic evidence1 Yes
DreddEY084041 --
DreddB118amorphic allele - genetic evidence0 Yes
DreddD44amorphic allele - genetic evidence0 Yes
DreddD55amorphic allele - genetic evidence0 Yes
DreddF64amorphic allele - genetic evidence0 Yes
DreddL23amorphic allele - genetic evidence0 Yes
DreddD30 Yes
Dreddunspecified
0 --
hide Alleles Carried on Transgenic Constructs ( 22 )
For All Alleles Carried on Transgenic Constructs Show

Allele of DreddClassMutagenStocksKnown lesion
DreddGD122521 Yes
DreddHMS000631 Yes
DreddKK1104281 Yes
Dredd+tCa0 Yes
DreddAct5C.T:SV5\V50 Yes
DreddC:A.MtnA.T:Hsap\MYC0 Yes
DredddsRNA.cMa0 Yes
DredddsRNA.cPa0 Yes
DredddsRNA.cZa0 Yes
DredddsRNA.Scer\UAS.cLa0 Yes
Dreddhs.PH0 Yes
DreddMtnA.T:Hsap\MYC0 Yes
DreddScer\UAS.cVa
0 Yes
DreddScer\UAS.T:Ivir\HA10 Yes
Dreddα.MtnA.T:Zzzz\FLAG,T:Hsap\MYC0 Yes
Dreddα.MtnA0 Yes
Dreddα.Δ1-120.MtnA.T:Zzzz\FLAG,T:Hsap\MYC0 Yes
Dreddβ.MtnA0 Yes
Dreddγ.MtnA.T:Uuuu\T7,T:Zzzz\His60 Yes
Dreddγ.MtnA0 Yes
Dreddδ.MtnA.T:Hsap\MYC0 Yes
Dreddδ.MtnA.T:Uuuu\T7,T:Zzzz\His60 Yes
hide Aneuploid Aberrations
Disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
reporter construct
characterization construct
Insertions
Type of insertions
Name
Expression data
insertion of mobile activating element
miscellaneous insertions
hide Gene Ontology: Function, Process & Cellular Component ( 16 unique terms )
hide Terms Based on Experimental Evidence ( 12 terms )
Molecular Function
CV term
References
inferred from mutant phenotype
(assigned by UniProtKB)
inferred from physical interaction with BG4
inferred from physical interaction with Rel
(assigned by UniProtKB)
Biological Process
CV term
References
inferred from expression pattern AND inferred from genetic interaction with rpr
(assigned by UniProtKB)
inferred from mutant phenotype
inferred from mutant phenotype
(assigned by UniProtKB)
inferred from mutant phenotype
inferred from mutant phenotype
Cellular Component
CV term
References
inferred from direct assay
(assigned by UniProtKB)
hide Terms Based on Predictions or Assertions ( 7 terms )
Molecular Function
CV term
References
inferred from sequence or structural similarity with human CASP10 AND inferred from sequence or structural similarity with human CASP8
(assigned by UniProtKB)
non-traceable author statement
traceable author statement
Biological Process
CV term
References
traceable author statement
Cellular Component ( 0 terms)
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
Dredd allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 5 )
Bloomington
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 16 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
hide Antibody Information
hide Other Information
hide Discoverer
hide Etymology
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Source for merge of: Dredd anon-1BCa
Additional comments
hide Other Comments
Dredd is necessary to provide immunity to reactive oxygen species-resistant pathogens.
dsRNA made from templates generated with primers directed against this gene stops cleavage of the Rel protein product in mbn-2 and S2 cells.
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
Rel endoproteolysis appears to be carried out by the caspase Dredd.
Mutants show no detectable induction of Dpt, CecA1 and CecA2. Attacin levels are reduced compared to wild type and Drs induction is normal.
Mutation in Dredd renders flies highly susceptible to infection by Gram-negative bacteria.
"Gene order: In direction of increasing cytology: RpL36+ l(1)1Bi+ Dredd- su(s)+" was stated as revision.
"Gene order: In direction of increasing cytology: RpL36? l(1)1Bi+ Dredd- su(s)+ CG13367? l(1)1Bk?" was stated as revision.
FlyBase curator comment: Gene order described in this paper is "l(1)1Bi? RpL36+ Dredd- su(s)+ CG13367? l(1)1Bk?". FBrf0098592 subsequently reversed the order of l(1)1Bi and RpL36.
Transcription unit defined during molecular analysis of the su(s) region.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
MEROPS - An information resource for peptidases and the proteins that inhibit them
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
FlyReactome - A curated knowledgebase of Drosophila melanogaster pathways
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 22 )
Reported As
Symbol Synonym
anon-1BCa
 
Dedd
 
Redd
 
Name Synonym
Ced-3-like/Nedd2-like protein
 
Death caspase-2
 
Death related ced-3/Nedd2-like protein
 
Drosophila caspase
Secondary FlyBase IDs
  • FBgn0013388
  • FBgn0023366
  • FBgn0024454
  • FBpp0070147
  • FBpp0070148
  • FBpp0070149
  • FBtr0070152
  • FBtr0070153
  • FBtr0070154
hide References ( 167 )
Generate a list of
List References by type
hide Recent research papers ( 9 )
Douglas et al., 2011, Proc. Biol. Sci. 278(1704): 333--338
How the insect immune system interacts with an obligate symbiotic bacterium. [FBrf0212672]
Guntermann and Foley, 2011, J. Biol. Chem. 286(35): 30284--30294
The Protein Dredd Is an Essential Component of the c-Jun N-terminal Kinase Pathway in the Drosophila Immune Response. [FBrf0214801]
Lee et al., 2011, J. Comp. Neurol. 519(1): 34--48
Drosophila caspases involved in developmentally regulated programmed cell death of peptidergic neurons during early metamorphosis. [FBrf0212368]
Paredes et al., 2011, Immunity 35(5): 770--779
Negative Regulation by Amidase PGRPs Shapes the Drosophila Antibacterial Response and Protects the Fly from Innocuous Infection. [FBrf0216727]
Suissa et al., 2011, J. Biol. Chem. 286(17): 15556--15564
The NAB-Brk Signal Bifurcates at JNK to Independently Induce Apoptosis and Compensatory Proliferation. [FBrf0213516]
Aymeric et al., 2010, Molec. Immunol. 47(14): 2342--2348
Imd pathway is involved in the interaction of Drosophila melanogaster with the entomopathogenic bacteria, Xenorhabdus nematophila and Photorhabdus luminescens. [FBrf0211463]
Fan and Bergmann, 2010, Cell Death Differ. 17(3): 534--539
The cleaved-Caspase-3 antibody is a marker of Caspase-9-like DRONC activity in Drosophila. [FBrf0209949]
Paquette et al., 2010, Mol. Cell 37(2): 172--182
Caspase-Mediated Cleavage, IAP Binding, and Ubiquitination: Linking Three Mechanisms Crucial for Drosophila NF-kappaB Signaling. [FBrf0209837]
Radyuk et al., 2010, Biochim. biophys. Acta 1800(11): 1153--1163
Peroxiredoxin 5 modulates immune response in Drosophila. [FBrf0211669]
hide Recent reviews (0)
All reviews listed in FlyBase were published before 2010