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Gene Dmel\fau

General Information
Symbol	Dmel\fau	Species	D. melanogaster
Name	fau	Annotation symbol	CG6544
Feature type	protein_coding_gene	FlyBase ID	FBgn0020439
Gene Model Status	Current	Stock availability	6 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	86C6-86C6	Sequence location	3R:6,593,888..6,603,090 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene fau is referred to in FlyBase by the symbol Dmel\fau (CG6544, FBgn0020439). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process: response to anoxia. 4 alleles are reported. No phenotypic data is available. It has 7 annotated transcripts and 7 annotated polypeptides. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of very low expression. Peak expression observed within 18-24 hour embryonic stages, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult crop, larval/adult midgut, larval/adult hindgut, adult heart, adult male accessory gland, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, adult thoracico-abdominal ganglion, adult fat body, larval trachea, adult female reproductive system, adult testis. Gene sequence location is 3R:6593888..6603090.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2011_10	Controlled Vocabulary Terms response to anoxia day 42 of adulthood day 41 of adulthood day 30 of adulthood day 49 of adulthood day 17 of adulthood day 45 of adulthood day 8 of adulthood day 26 of adulthood day 21 of adulthood day 13 of adulthood day 25 of adulthood day 20 of adulthood day 22 of adulthood day 39 of adulthood day 7 of adulthood day 36 of adulthood day 11 of adulthood day 37 of adulthood day 27 of adulthood day 18 of adulthood day 19 of adulthood day 28 of adulthood day 9 of adulthood day 29 of adulthood adult heart day 40 of adulthood day 16 of adulthood day 24 of adulthood day 15 of adulthood day 33 of adulthood day 43 of adulthood day 47 of adulthood day 38 of adulthood day 32 of adulthood day 48 of adulthood day 23 of adulthood day 35 of adulthood day 12 of adulthood day 10 of adulthood day 31 of adulthood day 34 of adulthood day 44 of adulthood day 14 of adulthood day 46 of adulthood
FB2012_01	Sequence features BKN32637 HFA16943 HFA12817 HFA16944 HFA12816 HFA16945
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 86C6-86C6   Limits computationally determined from genome sequence between P{PZ}hth05745 and P{EP}EP3340EP3340
Experimentally Determined Cytological Location
Cytogenetic map Notes References 7C-7D     (Ma, 1999.5.26)
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\fau for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) fau-RA FBtr0082307  NM_141758   2028   619 fau-RB FBtr0082306  NM_169362   1919   163 fau-RC FBtr0082308  NM_169361   1014   131 fau-RD FBtr0082309  NM_169360   676   98 fau-RE FBtr0303511  NM_001202280   1209   343 fau-RF FBtr0307389     2080   334 fau-RG FBtr0307390     2001   610
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein fau-PA   FBpp0081783   68.6   619   4.74     NP_650015   AAF54549 fau-PB   FBpp0081782   18.8   163   10.80     NP_731506   AAF54552 fau-PC   FBpp0081784   14.4   131   9.81     NP_731505   AAF54551 fau-PD   FBpp0081785   11.3   98   9.83     NP_731504   AAF54550 fau-PE   FBpp0292545   38.8   343   10.36     NP_001189209   ADV37300 fau-PF   FBpp0298378   37.8   334   10.35       fau-PG   FBpp0298379   67.6   610   4.70
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA567524   AA699028   AA802924   AA802934   AA803231   AA821233   AE014297 AAF54549   AE014297 AAF54550   AE014297 AAF54551   AE014297 AAF54552   AE014297 ADV37300   AF154418 AAD38397   AI062602   AI063922   AI109099   AI238296   AI257049   AI257209   AI259648   AI295524   AI386543   AW941994   AW942022   AY060997 AAL28545   AY119569 AAM50223   BG632667   BI165671   BI167361   BI167452   BI168503   BI171370   BI172256   BI216967   BI229418   BI229755   BI230906   BI233309   BI236330   BI237076   BI238286   BI241178   BI241330   BI242303   BI242404   BI243023   BI362851   BI364406   BI365715   BI367820   BI368403   BI368916   BI371413   BI372363   BI372474   BI373520   BI373815   BI374382   BI565718   BI580209   BI612369   BI615503   BI629802   BI629940   BT058020   BT120109   CK657057   CO176777   CO178365   CO178895   CO188286   CO189289   CO190815   CO193477   CO268363   CO269228   CO269930   CO270564   CO271148   CO271983   CO273082   CO274244   CO276681   CO285469   CO288087   CO291622   CO293360   CO294776   CO299323   CO299647   CO300702   CO302918   CO304986   CO304987   CO307436   CO307732   CO308174   CO309593   CO309934   CO311181   CO314125   CO315272   CO319399   CO320251   CO323259   CO324873   CO325010   CO326263   CO327263   CO327685   CO327902   CO328186   CO328351   CO329987   CO330233   CO331814   CO332402   CO333016   CO333148   CO333837   CO340295   CO343371   CZ484006   EC057732   EC058633   EC060178   EC062240   EC063739   EC065392   EC066124   EC066901   EC069781   EC071238   EC073944   EC074489   EC074643   EC075977   EC077814   EC079346   EC080413   EC082316   EC082317   EC083041   EC083340   EC086346   EC086460   EC089077   EC090265   EC090276   EC090609   EC197140   EC197678   EC200812   EC203262   EC205418   EC205578   EC206051   EC207027   EC208481   EC209321   EC213571   EC216542   EC220028   EC226504   EC228117   EC230276   EC231532   EC234586   EC235691   EC236701   EC239165   EC241050   EC242593   EC243431   EC249078   EC250896   EC251201   EC252058   EC253069   EC253268   EC254160   EC256220   EC256935   EC259930   EC259939   EC260582   ES695685   ES695698   ES695700   ES695709   ES695717   ES695720   ES695729   ES695748   ES695796   ES695800   ES695806   ES695813   ES695830   ES695964   ES695983   ES696246   ES696247   ES696249   ES696975   EV582434   EV583195   EV585471   EV594563   GH934219   GH941351   GH941996   GH942776   GH943084   GH946617   GH947432   GH947655   GH948202   GH950290   GH950411   GH951457   GH951886   GH952587   GH953240   GH955132   GH955832   GH956272   GH957675   GH958324   GH959597   GH960257   GH961073   GH962665   GH962667   GH962955   GH962973   GH963248   GH963655   GH964233   GH964357   GH967109   GH968218   GH968457   GH969027   GH970539   GH970682   GH970843   GH971138   GH974092   GH976129   GH978215   GH978842   GH979284   GH979931   GH981486   GH981881   GH981998   GH982161   GH982338   GH982476   GH982850   GH983760   GH984813
UniProtKB/Swiss-Prot	Q9VGX3
UniProtKB/TrEMBL
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
mass spectroscopy Stage Tissue/Position (including subcellular localization) Reference day 7 of adulthood -- day 49 of adulthood   adult heart   (Cammarato et al., 2011)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0020439    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0020439 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of very low expression. Peak expression observed within 18-24 hour embryonic stages, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0020439 expression level Developmental Stage   Expression Level embryo 00-02hr    20 embryo 02-04hr    19 embryo 04-06hr    12 embryo 06-08hr    26 embryo 08-10hr    64 embryo 10-12hr    90 embryo 12-14hr    192 embryo 14-16hr    1982 embryo 16-18hr    5785 embryo 18-20hr    19417 embryo 20-22hr    32230 embryo 22-24hr    26505 larva L1    13669 larva L2    11234 larva L3 12hr old    14715 larva L3 puffstage 1-2    16743 larva L3 puffstage 3-6    19978 larva L3 puffstage 7-9    21382 white prepupae new    11434 white prepupae 12hr    3738 white prepupae 24hr    977 pupae 2d postWPP    1925 pupae 3d postWPP    8386 pupae 4d postWPP    53637 adult male 01day    12581 adult male 05day    12845 adult male 30day    12911 adult female 01day    11018 adult female 05day    2217 adult female 30day    2627 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    20 embryo 02-04hr    19 embryo 04-06hr    12 embryo 06-08hr    26 embryo 08-10hr    64 embryo 10-12hr    90 embryo 12-14hr  (192) embryo 14-16hr  (1982) embryo 16-18hr  (5785) embryo 18-20hr  (19417) embryo 20-22hr  (32230) embryo 22-24hr  (26505) larva L1  (13669) larva L2  (11234) larva L3 12hr old  (14715) larva L3 puffstage 1-2  (16743) larva L3 puffstage 3-6  (19978) larva L3 puffstage 7-9  (21382) white prepupae new  (11434) white prepupae 12hr  (3738) white prepupae 24hr  (977) pupae 2d postWPP  (1925) pupae 3d postWPP  (8386) pupae 4d postWPP  (53637) adult male 01day  (12581) adult male 05day  (12845) adult male 30day  (12911) adult female 01day  (11018) adult female 05day  (2217) adult female 30day  (2627) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    20 embryo 02-04hr    19 embryo 04-06hr    12 embryo 06-08hr    26 embryo 08-10hr    64 embryo 10-12hr    90 embryo 12-14hr    192 embryo 14-16hr  (1982) embryo 16-18hr  (5785) embryo 18-20hr  (19417) embryo 20-22hr  (32230) embryo 22-24hr  (26505) larva L1  (13669) larva L2  (11234) larva L3 12hr old  (14715) larva L3 puffstage 1-2  (16743) larva L3 puffstage 3-6  (19978) larva L3 puffstage 7-9  (21382) white prepupae new  (11434) white prepupae 12hr  (3738) white prepupae 24hr    977 pupae 2d postWPP  (1925) pupae 3d postWPP  (8386) pupae 4d postWPP  (53637) adult male 01day  (12581) adult male 05day  (12845) adult male 30day  (12911) adult female 01day  (11018) adult female 05day  (2217) adult female 30day  (2627) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    20 embryo 02-04hr    19 embryo 04-06hr    12 embryo 06-08hr    26 embryo 08-10hr    64 embryo 10-12hr    90 embryo 12-14hr    192 embryo 14-16hr    1982 embryo 16-18hr    5785 embryo 18-20hr  (19417) embryo 20-22hr  (32230) embryo 22-24hr  (26505) larva L1  (13669) larva L2  (11234) larva L3 12hr old  (14715) larva L3 puffstage 1-2  (16743) larva L3 puffstage 3-6  (19978) larva L3 puffstage 7-9  (21382) white prepupae new  (11434) white prepupae 12hr    3738 white prepupae 24hr    977 pupae 2d postWPP    1925 pupae 3d postWPP    8386 pupae 4d postWPP  (53637) adult male 01day  (12581) adult male 05day  (12845) adult male 30day  (12911) adult female 01day  (11018) adult female 05day    2217 adult female 30day    2627 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    20 embryo 02-04hr    19 embryo 04-06hr    12 embryo 06-08hr    26 embryo 08-10hr    64 embryo 10-12hr    90 embryo 12-14hr    192 embryo 14-16hr    1982 embryo 16-18hr    5785 embryo 18-20hr    19417 embryo 20-22hr    32230 embryo 22-24hr    26505 larva L1    13669 larva L2    11234 larva L3 12hr old    14715 larva L3 puffstage 1-2    16743 larva L3 puffstage 3-6    19978 larva L3 puffstage 7-9    21382 white prepupae new    11434 white prepupae 12hr    3738 white prepupae 24hr    977 pupae 2d postWPP    1925 pupae 3d postWPP    8386 pupae 4d postWPP    53637 adult male 01day    12581 adult male 05day    12845 adult male 30day    12911 adult female 01day    11018 adult female 05day    2217 adult female 30day    2627 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0020439 expression level Developmental Stage   Expression Level embryo 00-02hr    20 embryo 02-04hr    19 embryo 04-06hr    12 embryo 06-08hr    26 embryo 08-10hr    64 embryo 10-12hr    90 embryo 12-14hr    192 embryo 14-16hr    1982 embryo 16-18hr    5785 embryo 18-20hr    19417 embryo 20-22hr    32230 embryo 22-24hr    26505 larva L1    13669 larva L2    11234 larva L3 12hr old    14715 larva L3 puffstage 1-2    16743 larva L3 puffstage 3-6    19978 larva L3 puffstage 7-9    21382 white prepupae new    11434 white prepupae 12hr    3738 white prepupae 24hr    977 pupae 2d postWPP    1925 pupae 3d postWPP    8386 pupae 4d postWPP    53637 adult male 01day    12581 adult male 05day    12845 adult male 30day    12911 adult female 01day    11018 adult female 05day    2217 adult female 30day    2627 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    20 embryo 02-04hr    19 embryo 04-06hr    12 embryo 06-08hr    26 embryo 08-10hr    64 embryo 10-12hr    90 embryo 12-14hr  (192) embryo 14-16hr  (1982) embryo 16-18hr  (5785) embryo 18-20hr  (19417) embryo 20-22hr  (32230) embryo 22-24hr  (26505) larva L1  (13669) larva L2  (11234) larva L3 12hr old  (14715) larva L3 puffstage 1-2  (16743) larva L3 puffstage 3-6  (19978) larva L3 puffstage 7-9  (21382) white prepupae new  (11434) white prepupae 12hr  (3738) white prepupae 24hr  (977) pupae 2d postWPP  (1925) pupae 3d postWPP  (8386) pupae 4d postWPP  (53637) adult male 01day  (12581) adult male 05day  (12845) adult male 30day  (12911) adult female 01day  (11018) adult female 05day  (2217) adult female 30day  (2627) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    20 embryo 02-04hr    19 embryo 04-06hr    12 embryo 06-08hr    26 embryo 08-10hr    64 embryo 10-12hr    90 embryo 12-14hr    192 embryo 14-16hr  1982 embryo 16-18hr  (5785) embryo 18-20hr  (19417) embryo 20-22hr  (32230) embryo 22-24hr  (26505) larva L1  (13669) larva L2  (11234) larva L3 12hr old  (14715) larva L3 puffstage 1-2  (16743) larva L3 puffstage 3-6  (19978) larva L3 puffstage 7-9  (21382) white prepupae new  (11434) white prepupae 12hr  (3738) white prepupae 24hr    977 pupae 2d postWPP  1925 pupae 3d postWPP  (8386) pupae 4d postWPP  (53637) adult male 01day  (12581) adult male 05day  (12845) adult male 30day  (12911) adult female 01day  (11018) adult female 05day  2217 adult female 30day  (2627) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    20 embryo 02-04hr    19 embryo 04-06hr    12 embryo 06-08hr    26 embryo 08-10hr    64 embryo 10-12hr    90 embryo 12-14hr    192 embryo 14-16hr    1982 embryo 16-18hr    5785 embryo 18-20hr  19417 embryo 20-22hr  (32230) embryo 22-24hr  (26505) larva L1  13669 larva L2  11234 larva L3 12hr old  14715 larva L3 puffstage 1-2  16743 larva L3 puffstage 3-6  19978 larva L3 puffstage 7-9  (21382) white prepupae new  11434 white prepupae 12hr    3738 white prepupae 24hr    977 pupae 2d postWPP    1925 pupae 3d postWPP    8386 pupae 4d postWPP  (53637) adult male 01day  12581 adult male 05day  12845 adult male 30day  12911 adult female 01day  11018 adult female 05day    2217 adult female 30day    2627 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    20 embryo 02-04hr    19 embryo 04-06hr    12 embryo 06-08hr    26 embryo 08-10hr    64 embryo 10-12hr    90 embryo 12-14hr    192 embryo 14-16hr    1982 embryo 16-18hr    5785 embryo 18-20hr    19417 embryo 20-22hr    32230 embryo 22-24hr    26505 larva L1    13669 larva L2    11234 larva L3 12hr old    14715 larva L3 puffstage 1-2    16743 larva L3 puffstage 3-6    19978 larva L3 puffstage 7-9    21382 white prepupae new    11434 white prepupae 12hr    3738 white prepupae 24hr    977 pupae 2d postWPP    1925 pupae 3d postWPP    8386 pupae 4d postWPP    53637 adult male 01day    12581 adult male 05day    12845 adult male 30day    12911 adult female 01day    11018 adult female 05day    2217 adult female 30day    2627 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0020439    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0020439 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult crop, larval/adult midgut, larval/adult hindgut, adult heart, adult male accessory gland, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, adult thoracico-abdominal ganglion, adult fat body, larval trachea, adult female reproductive system, adult testis. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Heatmap Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules no informative data Larval Fat Body     Larval Salivary Gland no informative data Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain no informative data Adult Thoracic-Abdominal Ganglion no informative data Adult Crop no informative data Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland     Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary no informative data Adult Testis no informative data Adult Male Accessory Gland no informative data Adult Carcass no informative data modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_10
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0020439 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6544-RD;CG6544-RB;CG6544-RC;CG6544-RC;CG6544-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for fau Stages(s) 1-3
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal, with Scer\GAL4pnr-MD237 fauGD10465 viable fauf01541 Sterility Allele fertile fauf01541 Phenotype manifest in Allele
Classical Alleles ( 2 )
For All Classical Alleles Show
Allele of fau Class Mutagen Stocks Known lesion fauf01541 piggyBac transposase 2 -- fauMB04842 1 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of fau Class Mutagen Stocks Known lesion fauGD10465 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes fauKK112637 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel6159 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD10465} NA P{KK112637} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions PBac{WH}fauf01541 NA insertion of enhancer trap binary system Mi{ET1}fauMB04842 No
Gene Ontology: Function, Process & Cellular Component ( 1 unique term )
	There is no information supporting a cellular component or molecular function term for this gene. (Based on a review of available data before: 2006)
Terms Based on Experimental Evidence ( 1 term )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
response to anoxia inferred from mutant phenotype (assigned by UniProtKB) (Ma et al., 1999)
Cellular Component ( 0 terms)
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions fau allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 66435 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0020439 DroID - A comprehensive database of gene and protein interactions. • FBgn0020439 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 41291
Orthologs
Genome-wide drosophilid orthologs	Dana\GF17091 Dere\GG17266 Dgri\GH19567 Dmoj\GI23863 Dper\GL21932 Dpse\GA19674 Dsec\GM26150 Dsim\GD20704 Dvir\GJ10576 Dwil\GK13394 Dyak\fau
Curated drosophilid orthologs	Dpse\GA19674   Dyak\fau
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AGAP002399-PA Anopheles gambiae (mosquito) BGIBMGA004894-PA Bombyx mori (silk worm) CPIJ008688 Culex pipens (mosquito) XP_970759.2 Tribolium castaneum (red flour beetle) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV18438 LH17641 LH17642 FBgn0067975 FBgn0215403 FBgn0197856 FBgn0192170 FBgn0079670 FBgn0159525 FBgn0146588 FBgn0127031 FBgn0109493 FBgn0094110 CPIJ008687 CPIJ008688 BGIBMGA004893 BGIBMGA004894 BGIBMGA003509 ACYPI008422 GB16683 GB12575 AGAP013481 AAEL002776 PB24856 PB24858 PB24859 PHUM548420 GLEAN_15895 GLEAN_15896
Stocks & Reagents
Stocks Listed in FlyBase ( 6 )
Bloomington	18448 w1118; PBac{WH}fauf01541 24827 w1118; Mi{ET1}fauMB04842
Harvard	- PBac{WH}fauf01541
VDRC	v106560 P{KK112637}VIE-260B v34066 w1118; P{GD10465}v34066 v34067 w1118; P{GD10465}v34067/TM3
Genomic Clones ( 2 )
	BACR15J23 BACR29B06 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 232 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GH08754 HL01392 HL07933
Other clones	DPiM_HL01392 MIP01644
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH01860 GH03808 GH04040 GH11987 GH14318 GH16656 GM06576 GM06588 GM10435 HL07331 LP03115 LP05305 LP05514 LP09184 LP23037 RE05610 RE07730 RE07840 RE09260 RE13127 RE14569 RE16169 RE24469 RE27191 RE27603 RE29619 RE32371 RE33232 RE34696 RE38195 RE38367 RE39602 RE39723 RE40551 RE47525 RE49507 RE51082 RE53668 RE54368 RE54975 RE58292 RE59311 RE59443 RE60833 RE61239 RE61957 RE74358 RH40811 RH45168 RH58717 RH58882 RH63532
Other clones	166 413 650 9893 10427 50199 54326 56704 61860 64121 65727 67104 70300 73367 73404 97554 100984 101569 108880 124285 124535 149137 149777 153507 158253 173621 178057 191496 191599 194199 214213.39 214213.54 214223.37 214307.48 214321.51 214413.39 214509.34 214569.35 214577.27 273950 274296 275030 280571 281007 282317 CK01.19C.F7 CK01.31A.D1 CK01.40B.E3 CK01.44B.B1 CK01.62A.E11 CK01.71B.G11 CK01.73C.C5 CK01.85C.E5 CK01.103B.G2 CK01.109B.C3 CK01.110A.G5 CK01.119C.H5 CK01.123B.G11 CK01.126B.A2 CK01.167A.D1 Dmel_dig_006108_0633_1895 Dmel_dig_011504_0660_1093 Dmel_dig_012192_0614_1361 Dmel_neb_006417_0572_1300 EC35986 EC205578 EK039035 EK043805 EK049820 EK050939 EK056528 EK057911 EK067719 EK091131 EK093926 EK096833 EK099327 EK102113 EK105362 EK109448 EK113625 EK121828 EK169043 EK175108 EK176046 EK179215 EK185148 EK190044 EK195045 EK195403 EK197833 EK202641 EK207636 EK218501 EK219964 EK223710 EK235145 EK246843 EK246844 EK254557 EK255435 EK256914 EK260862 EK278010 EK283124 EK294314 EK294761 EK301746 EK303343 EK305443 EK305914 EK308133 EP03534 EP06552 EP07852 EP08233 EP08719 EP09039 EP10355 EP16654 RC0-DP0010-150700-011-H12 RP003513517 RP004037051 RP004053276 RP004082062 RP004090453 RP004102791 RP004132706 RP004142180 RP004152108 RP004161592 RP004172279 RP004173639 RP004199209 RP004205728 RP004206037 RP004209050 RP004217082 RP004218563 RP004220500 RP004221869 RP004224085 RP004226149 RP004226515 RP004230850 RP004246743 RP004252345 RP004252434 RP004256738 RP004257168 RP004260791 RP004262764 RP004267512 RP004328172 RP004370868 RP004417074 RP004421110 RP004423686 RP004425745 RP004446594 RP004454885 RP004457878 RP004471841 RP004504751 RP004506045 RP004512256 RP004516580 RP004519696 RP004519854 RP004523519 RP004523584 RP004539100 RP004547519 RP004555535 RP004559874
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0020439 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41291
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: fau BcDNA:HL07933 (FlyBase, 1996-)
Additional comments	Source for merge of fau BcDNA:HL07933 was a shared cDNA (date:030728). (FlyBase, 1996-)
Other Comments
	Identification: A gene that is highly upregulated during anoxia. (Ma et al., 1997)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_141758 NM_169360 NM_169361 NM_169362 NM_001202280 RefSeq (Proteins) • NP_650015 NP_731504 NP_731505 NP_731506 NP_001189209 DDBJ / EMBL / GenBank • AA567524 AA821233 AAD38397 AAF54549 AAF54550 AAF54551 AAF54552 AAL28545 AAM50223 ADV37300 AF154418 AW941994 AW942022 AY060997 AY119569 CZ484006 Entrez Gene - A searchable database of RefSeq genes. • 41291 UniProtKB/Swiss-Prot • Q9VGX3
Other Crossreferences
Linkouts
	BioGRID - A database of protein and genetic interactions • 66435 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0020439 DroID - A comprehensive database of gene and protein interactions. • FBgn0020439 DRSC - Results from RNAi screens. • FBgn0020439 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0020439 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6544-RD;CG6544-RB;CG6544-RC;CG6544-RC;CG6544-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0020439 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41291 InParanoid A subset of ortholog calls from InParanoid. • AGAP002399-PA Anopheles gambiae (mosquito) BGIBMGA004894-PA Bombyx mori (silk worm) CPIJ008688 Culex pipens (mosquito) XP_970759.2 Tribolium castaneum (red flour beetle) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 41291 modMine - Data generated by the modENCODE project. • FBgn0020439 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV18438 LH17641 LH17642 FBgn0067975 FBgn0215403 FBgn0197856 FBgn0192170 FBgn0079670 FBgn0159525 FBgn0146588 FBgn0127031 FBgn0109493 FBgn0094110 CPIJ008687 CPIJ008688 BGIBMGA004893 BGIBMGA004894 BGIBMGA003509 ACYPI008422 GB16683 GB12575 AGAP013481 AAEL002776 PB24856 PB24858 PB24859 PHUM548420 GLEAN_15895 GLEAN_15896
Synonyms & Secondary IDs ( 4 )
Reported As
Symbol Synonym	BcDNA:HL07933   CG6544 (Goldman and Arbeitman, 2007, Keleman et al., 2009.8.5, Cammarato et al., 2011) Fau (Ma et al., 1997) fau (Reiter et al., 2007, Domazet-Loso and Tautz, 2003, Goldman and Arbeitman, 2007, Carpenter et al., 2009, Ma et al., 1999)
Name Synonym	fau (Goldman and Arbeitman, 2007, Cammarato et al., 2011)
Secondary FlyBase IDs
	FBgn0063173
References ( 22 )
Generate a list of	All references relating to this gene ( 22 )
List References by type	Research paper  ( 6 ) Supplementary material  ( 4 ) Personal communication to FlyBase  ( 5 ) Abstract  ( 1 ) FlyBase analysis  ( 2 ) DNA/RNA sequence record  ( 1 ) Computer file  ( 3 )
Recent research papers (0)
	All research papers listed in FlyBase were published before 2010 Show research papers ...